Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F84 I10 R1
|
267 |
426.1 |
13521957 |
97.0% |
13116298 |
150.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,193,177 |
C→T |
E134K (GAG→AAG) |
thiF ← |
adenylyltransferase, modifies ThiS C‑terminus |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,193,177 | 0 | C | T | 97.6%
| 1453.9
/ 12.4
| 423 | E134K (GAG→AAG) | thiF | adenylyltransferase, modifies ThiS C‑terminus |
| Reads supporting (aligned to +/- strand): ref base C (4/6); new base T (210/202); total (214/209) |
| Fisher's exact test for biased strand distribution p-value = 5.39e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 431 total aligned reads displayed.
TTGCGTTCTGGCTCCTGGTTATCTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCAGTCGCTGTTGGCTGACCTG > NC_000913/4193029‑4193324
|
ttGCGTTCTGGCTCCTGGTTATCTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACAGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAAtcttct > 8:535569/1‑151 (MQ=255)
gCGTTCTGGCTCCTGGTTATCTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTgg > 4:898277/1‑151 (MQ=255)
cGTTCTGGCTCCTGGTTATCTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGc < 5:1154266/151‑1 (MQ=255)
ggCTCCTGGTTATCTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAg < 3:862504/148‑1 (MQ=255)
ggCTCCTGGTTATCTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTc < 7:1102060/150‑1 (MQ=255)
gCTCCTGGTTATCTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGc > 8:1133164/1‑151 (MQ=255)
cTCCTGGTTATCTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGcc > 6:1154932/1‑151 (MQ=255)
ccTGGTTATCTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCa < 6:562542/150‑1 (MQ=255)
ccTGGTTATCTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCa < 6:205283/150‑1 (MQ=255)
tGGTTATCTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCatat > 3:251427/1‑151 (MQ=255)
ggTTATCTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCatat < 1:967243/150‑1 (MQ=255)
aTCTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTc < 4:1140272/150‑1 (MQ=255)
aTCTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTc < 7:1669640/150‑1 (MQ=255)
aTCTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTc < 1:1617175/150‑1 (MQ=255)
cacaGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGt > 7:613343/1‑151 (MQ=255)
cacaGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGt < 2:1398425/151‑1 (MQ=255)
acaGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTc > 3:1406026/1‑151 (MQ=255)
aGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCgc > 8:2762/1‑150 (MQ=255)
aGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCgc > 4:690094/1‑150 (MQ=255)
cAGCGGTAACACCGCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGca < 2:564365/151‑1 (MQ=255)
cAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGca < 8:794701/151‑1 (MQ=255)
cAGCGGTAACACCCCTGCTCCCAGAGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGc > 6:436142/1‑150 (MQ=255)
aGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCTGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGcac < 2:1035151/151‑1 (MQ=255)
gTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACcaca < 1:258400/151‑1 (MQ=255)
aaCACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCATCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATc > 8:1252339/1‑151 (MQ=255)
ccccTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGcc < 7:1585710/151‑1 (MQ=255)
gCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGt < 1:688776/149‑1 (MQ=255)
gCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGc > 4:1023467/1‑151 (MQ=255)
tCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCac > 1:1071280/1‑150 (MQ=255)
tCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCa > 8:498923/1‑150 (MQ=255)
cAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCg > 1:875651/1‑151 (MQ=255)
gggCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCa < 1:637923/151‑1 (MQ=255)
gcggcgTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATc > 8:430849/1‑151 (MQ=255)
gcggcgTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATc < 7:357315/151‑1 (MQ=255)
gcggcgTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATc < 6:624763/151‑1 (MQ=255)
cggcggCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCt < 4:494721/151‑1 (MQ=255)
gcgTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCttt < 3:1484349/151‑1 (MQ=255)
cgTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCtttt < 6:368051/151‑1 (MQ=255)
cgTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCtttt < 5:352564/151‑1 (MQ=255)
gTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTTCAGTCGATCACCACATCGGCCCGTGCAACCGCATCtttt > 2:1506023/1‑150 (MQ=255)
gTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCtttt > 2:888848/1‑150 (MQ=255)
cAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTaa < 4:1569059/150‑1 (MQ=255)
tACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGACTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGcc > 3:473044/1‑151 (MQ=255)
aCCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCCCCACATCGGCCCGTGCAACCGCATCTTTTAACGcc > 5:1262939/1‑150 (MQ=255)
cATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTcc > 8:633841/1‑150 (MQ=255)
cATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTc > 7:1207536/1‑150 (MQ=255)
cATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCa < 8:695615/151‑1 (MQ=255)
cAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCGTTTAACGCCTCAccc > 5:825760/1‑151 (MQ=255)
aCTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGt < 8:1699514/151‑1 (MQ=255)
cTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCACCCGCATCTTTTAACGCCTCACCCGtt > 7:1044488/1‑151 (MQ=255)
aCCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAAc > 4:1203523/1‑151 (MQ=255)
aCCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAAc < 5:475267/151‑1 (MQ=255)
ccGCCAAATGCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAAcc < 4:184373/151‑1 (MQ=255)
gCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCgt < 3:1051124/151‑1 (MQ=255)
cAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCAGATAGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCgttg < 5:1243216/151‑1 (MQ=255)
aaTCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCgttgtt < 7:1151895/151‑1 (MQ=255)
aaTCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCgttgtt < 2:193562/151‑1 (MQ=255)
cGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTaa < 8:887315/151‑1 (MQ=255)
ggccGCGCTGGCGGTGATAAGCGGCGTGTTTAGTGCCCCGCCGGCGGCATTAATCTTATGGGGCGTCGCCCTATTGTCGGTACCGTCGCGCACCCCATCGGCCCGGGCAACCGCCTCGTGTTACCCCGCCCCCGGTAACCGTTGTGGTAAt > 4:1492047/3‑151 (MQ=255)
gACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAAt < 3:1676152/151‑1 (MQ=255)
aCCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATg < 6:1033186/151‑1 (MQ=255)
ccGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGc < 6:1569570/151‑1 (MQ=255)
ccGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGc < 3:127446/151‑1 (MQ=255)
cgcTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGt < 4:1077004/151‑1 (MQ=255)
gcTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTc < 5:17748/151‑1 (MQ=255)
gcTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTc < 5:1340863/151‑1 (MQ=255)
gCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGtt > 7:80736/1‑151 (MQ=255)
ggTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGa < 5:1040466/151‑1 (MQ=255)
tGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAAt > 1:453140/1‑151 (MQ=255)
gATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAAt < 4:960736/150‑1 (MQ=255)
tAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTc > 7:410622/1‑151 (MQ=255)
aGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTTATGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCCCATCTTTTAACGCCTAACCCGTTAACCCTTCTTGTAATGCTGTCAGTTGAATGTAgg > 7:99312/1‑151 (MQ=255)
gcggcgTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCggg > 2:1607766/1‑151 (MQ=255)
gcggcgTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCggg > 8:210932/1‑151 (MQ=255)
cggcgTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGCGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGGTAACCGTTGGTGTAATGCTGTCAGTTGAATGTCgggg > 1:1471416/1‑150 (MQ=255)
cgTGTTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTc < 2:764264/151‑1 (MQ=255)
gtgtTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCa < 3:1328676/151‑1 (MQ=255)
tgtTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCa > 1:1311505/1‑150 (MQ=255)
tgtTGAGTGCCACGCAGGCGGCACTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCa > 1:1224857/1‑150 (MQ=255)
gtTGAGTGCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCaa < 5:1493551/150‑1 (MQ=255)
gCCACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCa < 7:895796/151‑1 (MQ=255)
gCCACGCAGGCGGCATTAATCTTCTCGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCa < 6:850362/151‑1 (MQ=255)
ccACGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCAg < 2:353304/151‑1 (MQ=255)
cGCAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCAGTCg > 5:903097/1‑151 (MQ=255)
cAGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCAGTCGCt < 6:97904/151‑1 (MQ=255)
aGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCAGTCGCTg > 1:1535889/1‑151 (MQ=255)
aGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCAGTCGCTg > 3:659430/1‑151 (MQ=255)
aGGCGGCATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCAGTGCAACCGCATCTTTTAAAGCCTCACCCGTTAACGGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCAGTCGCTg > 8:34433/1‑151 (MQ=255)
gcggcATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCAGTCGCTGtt < 1:1422696/151‑1 (MQ=255)
gcggcATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCAGTCGCTGtt > 8:1340537/1‑151 (MQ=255)
cggcATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCAGTCGCTGTTg > 2:1249592/1‑151 (MQ=255)
ggcATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCAGTCGCTGTTgg < 6:687386/151‑1 (MQ=255)
ggcATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACACGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCAGTCGCTGTTgg > 5:561603/1‑151 (MQ=255)
cATTAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCATCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCAGTCGCTGTTGGCt > 4:590894/1‑151 (MQ=255)
tAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCAGTCGCTGTTGGCTGa < 1:328831/150‑1 (MQ=255)
tAATCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCAGTCGCTGTTGGCTGa < 4:389421/150‑1 (MQ=255)
aaTCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCAGTCGCTGTTGGGTGAcc > 8:1180270/1‑151 (MQ=255)
aaTCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCAGTCGCTGTTGGCTGAcc > 7:1333815/1‑151 (MQ=255)
aaTCTTCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCAGTCGCTGTTGGCTGAcc > 1:1005490/1‑151 (MQ=255)
tcttctGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCAGTCGCTGTTGGCTGACCTg > 8:1626626/1‑151 (MQ=255)
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TTGCGTTCTGGCTCCTGGTTATCTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCAGTCGCTGTTGGCTGACCTG > NC_000913/4193029‑4193324
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
