Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F84 I10 R1
|
267 |
426.1 |
13521957 |
97.0% |
13116298 |
150.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,311,337 |
C→T |
A236T (GCA→ACA) |
alsB ← |
D‑allose ABC transporter periplasmic binding protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,311,337 | 0 | C | T | 96.9%
| 1292.0
/ 17.2
| 387 | A236T (GCA→ACA) | alsB | D‑allose ABC transporter periplasmic binding protein |
| Reads supporting (aligned to +/- strand): ref base C (4/8); new base T (169/205); total (173/214) |
| Fisher's exact test for biased strand distribution p-value = 5.59e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 387 total aligned reads displayed.
CAACCATCAGCTTCAGACCCGTTGCGCCGATATCCGCCGGGTTCTGGGCAACCGTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGCGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGACATCCAGTGCTTTAATGCGGTCCCAGTCGGCAGGCTGGCTGGCGACAAGCTTGATCTG > NC_000913/4311190‑4311484
|
cAACCATCAGCTTCAGACCCGTTGCGCCGATATCCGCCGGGTTCTGGGCAACCGTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGCCCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGAc > 1:1074474/1‑151 (MQ=255)
aaCCATCAGCTTCAGACCCGTTGCGCCGATATCCGCCGGGTTCTGGGCAACCGTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACt < 3:1075895/151‑1 (MQ=255)
ccATCAGCTTCACACCCGTTGCGCCGATATCCGCCGGCTTCTGGGCAACCGTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGc < 6:207761/151‑1 (MQ=255)
cAGCTTCAGACCCCTTGCGCAGATATCGGCCGGCGTCTGTGCATCCGGCGCGGTCATTTCACCGGCTTCCACCATTTTGCGGGCTTCCGGTCTGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGa < 2:495816/151‑1 (MQ=255)
gCTTCAGACCCGTTGCGCCGATATCCGCCGGGTTCTGGGCAACCGTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGc < 5:1402935/151‑1 (MQ=255)
cTTCAGACCCGTTGCGCCGATATCCGCCGGGTTCTGGGCAACCGTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGc > 7:1466506/1‑150 (MQ=255)
tCAGACCCGTTGCGCCGATATCCGCCGGGTTCTGGGCACCCGTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAac > 6:1035168/1‑151 (MQ=255)
cAGACCCGTTGCGCCGATATCCGCCGGGTTCTGGGCAACCGTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAac > 6:1510432/1‑150 (MQ=255)
aGACCCGTTGCGCCGATATCCGCCGGGTTCTGGGCAACCGTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAacac > 6:1101955/1‑151 (MQ=255)
aGACCCGTTGCGCCGATATCCGCCGGGTTCTGGGCAACCGTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAacac > 8:699285/1‑151 (MQ=255)
gACCCGTTGCGCCGATATCCGCCGGGTTCTGGGCAACCGTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCCGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACAcc > 7:564329/1‑151 (MQ=255)
aCCCGTTGCGCCGATATCCGCCGGGTTCTGGGCAACCGTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACAccc > 5:1238024/1‑151 (MQ=255)
ggatGCGCCGATATCCGCCGGGTTCTGGGGAACCGTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTGCGGAATGCCATGTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTTACTGCCTGAGCAACACCCAtt < 2:1065600/148‑1 (MQ=255)
cGTTGCGCCGATATCCGCCGGGTTCTGGGCAACCGTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGCCGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGCGACTGCCTGAGCACCACCCAtt > 2:1667101/1‑151 (MQ=255)
cGTTGCGCCGATATCCGCCGGGTTCTGGGCAACCGTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGCCCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGCCTGCCTGCGCAACCCCCAtt > 8:1400519/1‑151 (MQ=255)
cGTTGCGCCGATATCCGCCGGGTTCTGGGCAACCGTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCAtt < 1:1620770/151‑1 (MQ=255)
cGTTGCGCCGATATCCGCCGGGTTCTGGGCAACCGTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCAtt < 2:271492/151‑1 (MQ=255)
gcCGATATCCGCCGGGTTCTGGGCAACCGTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATc < 1:276311/151‑1 (MQ=255)
gcCGATATCCGCCGGGTTCTGGGCAACCGTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATc > 4:484914/1‑151 (MQ=255)
gcCGATATCCGCCGGGTTCTGGGCAACCGTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGCGACTGCCTGAGCAACACCCATTGCCATc < 1:306096/151‑1 (MQ=255)
ccGATATCCGCCGGGTTCTGGGCAACCGTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCg > 6:1703062/1‑151 (MQ=255)
ccGATATCCGCCGGGTTCTGGGCAACCGTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCg > 1:454350/1‑151 (MQ=255)
ccGATATCCGCCGGGTTCTGGGCAACCGTCGAGCTCATTTGTCAGGCTTCCACCATTTTGCCGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCAACg > 3:878484/1‑151 (MQ=255)
gATATCCGCCGGGTTCTGGGCAACCGTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCgtg > 2:113054/1‑151 (MQ=255)
cgccgGGTTCTGGGCAACCGTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTc < 5:1172100/151‑1 (MQ=255)
ccgGGTTCTGGGCAACCGTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCTTTcgc > 1:1000703/1‑151 (MQ=255)
ggTTCTGGGCAACCGTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCa < 8:881472/151‑1 (MQ=255)
gggCAACCGTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGAt < 2:392033/151‑1 (MQ=255)
gggCAACCGTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGAt < 1:907800/151‑1 (MQ=255)
ggCAACCGTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATc < 3:570060/151‑1 (MQ=255)
gCAACCGTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCg < 5:701492/151‑1 (MQ=255)
ccGTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCttt > 4:1464631/1‑151 (MQ=255)
ccGTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCttt < 3:1172675/151‑1 (MQ=255)
cGTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCttt > 7:306820/1‑150 (MQ=255)
cGTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTa < 6:767793/151‑1 (MQ=255)
ggcgcgGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTaa < 5:1025687/149‑1 (MQ=255)
gTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTACCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTa > 7:1294383/1‑150 (MQ=255)
tCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAat > 3:503836/1‑151 (MQ=255)
tCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAat > 1:649113/1‑151 (MQ=255)
gcgcgGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAat < 7:700337/150‑1 (MQ=255)
gcgcgGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAat < 8:444249/150‑1 (MQ=255)
gcgGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAatat < 5:42647/151‑1 (MQ=255)
gcgGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAatat < 2:836504/151‑1 (MQ=255)
cATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCgg > 2:1231261/1‑150 (MQ=255)
cATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGa < 7:1050979/151‑1 (MQ=255)
aTTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGAt > 7:1017588/1‑151 (MQ=255)
tGTCCGGCTTCCAGCATTTTGCGTGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGTCGTTTGTGACTGCGTGAGCATCTCCCATTGCCATCGTGTCATTCGCGGAATATATCGCTTTAATATTCGGATTa < 6:1451009/150‑1 (MQ=255)
tGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTa < 6:504387/150‑1 (MQ=255)
tGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTAc > 4:1372520/1‑151 (MQ=255)
gTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTAc < 5:642374/150‑1 (MQ=255)
ccGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGtt > 1:410594/1‑151 (MQ=255)
cGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTg < 4:224898/151‑1 (MQ=255)
ggCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGc < 3:1251711/151‑1 (MQ=255)
ccaccaTTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAaca < 8:511597/150‑1 (MQ=255)
accaTTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGCGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGt < 2:716999/151‑1 (MQ=255)
ccaTTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGtt < 5:587690/151‑1 (MQ=255)
ttGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTCTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTAAGTgg > 5:931367/1‑151 (MQ=255)
tGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTgg < 8:1229217/150‑1 (MQ=255)
gCGGGCTTCCGGAATGCGATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGc < 8:317770/150‑1 (MQ=255)
gCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCg > 7:975277/1‑151 (MQ=255)
gCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCg < 5:136865/151‑1 (MQ=255)
cGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTGCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGa < 6:730036/151‑1 (MQ=255)
cGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCg > 6:616701/1‑150 (MQ=255)
cGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGa < 4:1593456/151‑1 (MQ=255)
ggCTTCCGGACTGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGACa < 2:949635/151‑1 (MQ=255)
gCTTCCGGAATGCCATCTGTAACGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGAGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGACAt > 6:46300/1‑151 (MQ=255)
tCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTGCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGACATcc < 2:455421/150‑1 (MQ=255)
ccGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGACATcc > 6:909258/1‑149 (MQ=255)
cGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGACATCCAGt < 4:116486/151‑1 (MQ=255)
gAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGACATCCAGTGc < 5:1564963/151‑1 (MQ=255)
gCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGACATCCAGTGCttt < 2:1450052/150‑1 (MQ=255)
gCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGACATCCAGTGCttt > 8:1530989/1‑150 (MQ=255)
gCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGACATCCAGTGCTTTa < 4:752229/151‑1 (MQ=255)
tGTACCCACGACCACAACTTTTACCCTTTTTACGGCCTTTGTGACTCCCTGACCAACACCCATTGCCATCGTGTCAATCCAGCAATAGATCCCTGTAATATACGCATTACCTTGCAACACGATAGTGGCGACAACCAGTCCTTTAATGCgg > 2:1117951/1‑151 (MQ=255)
gTACCGACGACCAGCAGATTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGACATCCAGTGCTTTAATGc < 1:1179874/148‑1 (MQ=255)
aCCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGACATCCAGTGCTTTAATGCGGTcc < 5:267344/151‑1 (MQ=255)
ccGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGACATCCAGTGCTTTAATGCGGTccc < 7:1512331/151‑1 (MQ=255)
ccGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGCGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGACATCCAGTGCTTTAATGCGGTccc < 4:1115677/151‑1 (MQ=255)
cgacgaCCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGACATCCAGTGCTTTAATGCGGTccc > 1:1464530/1‑150 (MQ=255)
cgacgaCCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGACATCCAGTGCTTTAATGCGGTCCCa < 1:155910/151‑1 (MQ=255)
gacgacCAGCACTTTTCGCGTTTTTCCGGCGTTTGTGACTGCCTGCGCAACCCCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGATAGTGGCGACATCCAGTGCTTTAATGCGGTCCCat > 4:1285997/1‑150 (MQ=255)
cgacCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGACATCCAGTGCTTTAATGCGGTCCCAGTc < 6:1203056/151‑1 (MQ=255)
cgacCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGACATCCAGTGCTTTAATGCGGTCCCAGTc < 3:66918/151‑1 (MQ=255)
gacCAGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGACATCCAGTGCTTTAATGCGGTCCCAGTCg > 1:1276026/1‑151 (MQ=255)
aGCACTTTTCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGACATCCAGTGCTTTAATGCGGTCCCAGTCGGCAg < 3:1388629/151‑1 (MQ=255)
tttCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGACATCCAGTGCTTTAATGCGGTCCCAGTCGGCAggctgg < 8:1699847/150‑1 (MQ=255)
tttCCCGTTTTTCCGGCGGTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGACATCCAGTGCTTTAATGCGGTCCCAGTCGGCAggctg < 2:1591486/149‑1 (MQ=255)
ttCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGACATCCAGTGCTTTAATGCGGTCCCAGTCGGCAggctggct > 5:1515574/1‑151 (MQ=255)
tCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGACATCCAGTGCTTTAATGCGGTCCCAGTCGGCAggctggct < 7:1654497/150‑1 (MQ=255)
tCCCGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGACATCCAGTGCTTTAATGCGGTCCCAGTCGGCAggctggct < 3:1624466/150‑1 (MQ=255)
cccGTTTTTCCGGCGTTTGTGAGTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATAACGTTGCAACACGTTAGTGGCGACATCCAGTGCTTTAATGCGGTCCCAGTCGGCAGGctggctgg < 8:108669/151‑1 (MQ=255)
cccGTTTTTCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGACATCCAGTGCTTTAATGCGGTCCCAGTCGGCAGGctggctgg > 7:193183/1‑151 (MQ=255)
cGTTTTTCCGGCGGTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGACATCCAGTGCTTTAATGCGGTCCCAGTCGGCAGGCTGGCTGGCg < 2:1350409/151‑1 (MQ=255)
tttCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGACATCCAGTGCTTTAATGCGGTCCCAGTCGGCAGGCTGGCTGGCGACa > 4:1044048/1‑150 (MQ=255)
tCCGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGACATCCAGTGCTTTAATGCGGTCCCAGTCGGCAGGCTGGCTGGCGACAAg < 2:630854/150‑1 (MQ=255)
cGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGACATCCAGTGCTTTAATGCGGTCCCAGTCGGCAGGCTGGCTGGCGACAAGCtt < 3:420539/151‑1 (MQ=255)
cGGCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGACATCCAGTGCTTTAATGCGGTCCCAGTCGGCAGGCTGGCTGGCGACAAGCtt < 3:322660/151‑1 (MQ=255)
ggCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGACATCCAGTGCTTTAATGCGGTCCCAGTCGGCAGGCTGGCTGGCGACAAGCTTg < 3:274598/151‑1 (MQ=255)
gCGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGAGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGACATCCAGTGCTTTAATGAGGTCCCAGTCGGCAGGCTGGCTGGCGACAAGCt > 1:749975/1‑148 (MQ=255)
cGTTTGTGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGACATCCAGTGCTTTAATGCGGTCCCAGTCGGCAGGCTGGCTGGCGACAAGCTTGAt < 5:833572/151‑1 (MQ=255)
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CAACCATCAGCTTCAGACCCGTTGCGCCGATATCCGCCGGGTTCTGGGCAACCGTCGCGGTCATTTGTCCGGCTTCCACCATTTTGCGGGCTTCCGGAATGCCATCTGTACCGACGACCAGCACTTTTCCCGTTTTTCCGGCGTTTGCGACTGCCTGAGCAACACCCATTGCCATCGTGTCATTCGCGCAATAGATCGCTTTAATATTCGGATTACGTTGCAACACGTTAGTGGCGACATCCAGTGCTTTAATGCGGTCCCAGTCGGCAGGCTGGCTGGCGACAAGCTTGATCTG > NC_000913/4311190‑4311484
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
