Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F84 I10 R1
|
267 |
426.1 |
13521957 |
97.0% |
13116298 |
150.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,320,785 |
C→T |
E155K (GAG→AAG) |
phnH ← |
ribophosphonate triphosphate synthase subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,320,785 | 0 | C | T | 95.5%
| 1421.3
/ 36.5
| 442 | E155K (GAG→AAG) | phnH | ribophosphonate triphosphate synthase subunit |
| Reads supporting (aligned to +/- strand): ref base C (10/10); new base T (204/216); total (214/228) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.46e-01 |
Only 100 of 442 total aligned reads displayed.
CTCGCCCCCTTTCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGCGTCGCACCCGCTTCCGGCGCAACGGCGGTGCCGGTGGAAAGGGCGTTGAG > NC_000913/4320637‑4320932
|
tcGCCCCCTTTCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCgg > 8:1574549/1‑151 (MQ=255)
cGCCCCCTTTCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCg < 1:1143794/149‑1 (MQ=255)
gCCCCCTTTCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGc > 8:1246232/1‑150 (MQ=255)
cccccTTTCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGc > 2:1469529/1‑149 (MQ=255)
cccTTTCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCt < 7:925701/151‑1 (MQ=255)
ccTTTCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCACGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTg > 1:801540/1‑151 (MQ=255)
tttCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCg > 4:318217/1‑151 (MQ=255)
cACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGa < 3:932779/150‑1 (MQ=255)
cGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGGCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCg < 4:1165538/151‑1 (MQ=255)
ggCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGa < 6:121163/151‑1 (MQ=255)
ggCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGa < 1:1576620/151‑1 (MQ=255)
gtaaCGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGAt > 4:513080/3‑151 (MQ=255)
cAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATc < 5:652720/151‑1 (MQ=255)
aaCGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATc > 7:872528/1‑150 (MQ=255)
aaCGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATc > 2:364191/1‑150 (MQ=255)
aaCGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATc > 4:474603/1‑150 (MQ=255)
cGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCAtt > 2:1618824/1‑151 (MQ=255)
cGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCAtt > 5:59956/1‑151 (MQ=255)
cGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCAAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCAtt > 5:1606102/1‑151 (MQ=255)
gTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTc > 7:227471/1‑151 (MQ=255)
cATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGtt < 3:1251670/151‑1 (MQ=255)
aTCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGttc > 6:1482726/1‑151 (MQ=255)
cAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGttctt < 1:232825/151‑1 (MQ=255)
cAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGttct < 1:1030715/150‑1 (MQ=255)
aGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGttcttc < 3:723487/151‑1 (MQ=255)
acacCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGc < 2:604450/151‑1 (MQ=255)
acacCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGc > 5:237047/1‑151 (MQ=255)
cTCCACATGAGTGGTTCGCGGAATAGCCAGCACGAGCTCGACACAGGTCAGGATCAGGTCGATGCCCAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGCCAAt > 2:1130443/1‑150 (MQ=255)
ccACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATAc < 5:1347239/150‑1 (MQ=255)
cacaTGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATAccc > 3:685270/1‑151 (MQ=255)
cacaTGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATAccc < 8:1090924/151‑1 (MQ=255)
cacaTGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATAccc > 6:284236/1‑151 (MQ=255)
aTGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCa < 8:669703/151‑1 (MQ=255)
aGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCAcc > 7:425143/1‑150 (MQ=255)
ggTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGt > 5:876735/1‑150 (MQ=255)
gTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTa > 2:463923/1‑150 (MQ=255)
gTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTaa < 1:1680778/151‑1 (MQ=255)
tCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAgg > 6:1398862/1‑151 (MQ=255)
cgcgGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGgc < 5:760310/151‑1 (MQ=255)
gcgGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGgcg > 1:1460413/1‑151 (MQ=255)
ggAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGgcgc > 8:216861/1‑150 (MQ=255)
aGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACAt < 6:1257834/150‑1 (MQ=255)
aGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATg < 4:1621568/151‑1 (MQ=255)
aGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATg > 4:1448459/1‑151 (MQ=255)
cagGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTccg > 2:928127/1‑151 (MQ=255)
agGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTccgc < 2:262696/151‑1 (MQ=255)
agGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAAAGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTccgc > 3:1540350/1‑151 (MQ=255)
ggCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTccgcc < 7:1151284/151‑1 (MQ=255)
gcgcTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTccgccg < 8:795418/151‑1 (MQ=255)
cgcTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCcgccgc > 4:413281/1‑151 (MQ=255)
gcTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCt > 3:1378268/1‑151 (MQ=255)
gcTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCCGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCt < 4:1029149/151‑1 (MQ=255)
cGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTc < 4:238264/149‑1 (MQ=255)
gCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAgg < 3:303098/151‑1 (MQ=255)
ccACAGGTCAGGATCAGGTCGATGCCTAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATAACCGCACCAGTAAGGCGCAACATGCGTCCTCCGCTCAGGc > 5:548910/1‑151 (MQ=255)
ccACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGc < 7:530349/151‑1 (MQ=255)
ccACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGc < 4:795936/151‑1 (MQ=255)
ccACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGc > 3:526731/1‑151 (MQ=255)
cacaGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCt > 4:1339985/1‑151 (MQ=255)
caGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAAAGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTAGGCAATACCCGCACCACTAAGGCGCAACATGCGTCCGCCGCTCAGGCTgc > 8:864718/1‑150 (MQ=255)
aGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTaaaa < 1:569812/151‑1 (MQ=255)
ggTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAAt < 2:135029/151‑1 (MQ=255)
gATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGc < 6:984600/151‑1 (MQ=255)
gATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGc < 3:1606122/151‑1 (MQ=255)
gATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGc > 4:759531/1‑151 (MQ=255)
gATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGATCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACAAGTAAGGCGCAACATGCGTCCGACGCTCAGGCTGGCGACGCGTATAATCAGc > 6:1643083/1‑151 (MQ=255)
aTGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGCg < 7:289711/151‑1 (MQ=255)
gCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGTAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGCGTc < 7:75601/151‑1 (MQ=255)
gCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGCGt < 5:983274/150‑1 (MQ=255)
gCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGCGTc < 7:1073268/151‑1 (MQ=255)
ccGAGCGGGAACGGATGCGGGCGCTCGGGGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGCGTCg < 5:436471/151‑1 (MQ=255)
gAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGGACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGCGTCGCa < 3:816994/151‑1 (MQ=255)
gAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGCGTCGc > 1:1250757/1‑150 (MQ=255)
gAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGCGTCGCa < 6:1118020/151‑1 (MQ=255)
aGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGCGTCGCAc > 6:1691127/1‑151 (MQ=255)
aGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGCGTCGCAc > 5:106962/1‑151 (MQ=255)
gCGGGAACGGATCCGGGCGCTCGGTGAGTTCGTGCAGAATGCTCTTCGGCAGCTGCGGAGCGATCAATCGTTCTTCGGCAATACCCGCACCAGTAAGCCGCAACATGCGTCCGCCGCTCACGCTGGCCACCTGTAAAATCAGCGTCGCAcc > 4:1100378/1‑151 (MQ=255)
cGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGCCCTGTAAAATCAGCGTCGCAccc > 8:411344/1‑151 (MQ=255)
cGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGCGTCGCAccc < 6:771426/151‑1 (MQ=255)
ggAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGCGTCGCACCCGc > 1:385176/1‑151 (MQ=255)
aaCGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGCGTCGCACCCGCtt < 7:1265294/151‑1 (MQ=255)
cGGGCGCTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGCGTCGCACCCGCTTCCGgcgc > 3:366470/1‑150 (MQ=255)
gcTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGCGTCGCACCCGCTTCCGGCGCAAcggc < 5:1499652/151‑1 (MQ=255)
gcTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGCGTCGCACCCGCTTCCGGCGCAAcggc < 5:342177/151‑1 (MQ=255)
gcTCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTGCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGCGTCGCACCCGCTTCCGGCGCAAcggc < 1:962045/151‑1 (MQ=255)
tCGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGCGTCGCACCCGCTTCCGGCGCAAcggcgg > 2:412343/1‑151 (MQ=255)
cGGTGAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGCGTCGCACCCGCTTCCGGCGCAACGGCGGt < 2:730571/151‑1 (MQ=255)
gAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGCGTCGCACCCGCTTCCGGCGCAACGGCGGTGcc < 5:1139293/150‑1 (MQ=255)
gAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGCGTCGCACCCGCTTCCGGCGCAACGGCGGTGCCg < 7:1554081/151‑1 (MQ=255)
gAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGCGTCGCACCCGCTTCCGGCGCAACGGCGGTGCCg < 4:127655/151‑1 (MQ=255)
gAGTTCGTGCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGCCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGCGTCGCACCCGCTTCCGGCGCAACGGCGGTGcc < 7:1668338/150‑1 (MQ=255)
cGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGCGTCGCACCCGCTTCCGGCGCAACGGCGGTGCCGGTgg > 6:1582732/1‑150 (MQ=255)
gCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGCGTCGCACCCGCTTCCGGCGCAACGGCGGTGCCGGTGGaaa < 7:1470584/150‑1 (MQ=255)
gCAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGCGTCGCACCCGCTTCCGGCGCAACGGCGGTGCCGGTGGaa > 8:1030724/1‑149 (MQ=255)
gCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGCGTCGCACCCGCTTCCGGCGCAACGGCGGTGCCGGTGGaa > 8:1474952/1‑149 (MQ=255)
cAGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGCGTCGCACCCGCTTCCGGCGCAACGGCGGTGCCGGTGGAAAgg > 6:851040/1‑151 (MQ=255)
aGAATGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGCGTCGCACCCGCTTCCGGCGCAACGGCGGTGCCGGTGGAAAggg < 6:5381/151‑1 (MQ=255)
aaTGCACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGCGTCGCACCCGCTTCCGGCGCAACGGCGGTGCCGGTGGAAAGGGCg < 2:838082/151‑1 (MQ=255)
cACTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGCGTCGCACCCGCTTCCGGCGCAACGGCGGTGCCGGTGGAAAGGGCGTTGa < 8:1396649/151‑1 (MQ=255)
aCTTCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGCGTCGCACCCGCTTCCGGCGCAACGGCGGTGCCGGTGGAAAGGGCGTTg > 5:1386381/1‑149 (MQ=255)
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CTCGCCCCCTTTCACGGCAACGTACATCAGCACACCTCCACATGAGTGGTTCGCGGAATAGCCAGCAGGCGCTCGCCACAGGTCAGGATCAGGTCGATGCCGAGCGGGAACGGATGCGGGCGCTCGGTGAGTTCGTGCAGAATGCACTCCGGCAGCTGCGGAGCGATCATTCGTTCTTCGGCAATACCCGCACCAGTAAGGCGCAACATGCGTCCGCCGCTCAGGCTGGCGACCTGTAAAATCAGCGTCGCACCCGCTTCCGGCGCAACGGCGGTGCCGGTGGAAAGGGCGTTGAG > NC_000913/4320637‑4320932
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
