Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F84 I10 R1
|
267 |
426.1 |
13521957 |
97.0% |
13116298 |
150.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,332,310 |
C→T |
G321G (GGG→GGA) |
basS ← |
sensory histidine kinase in two‑component regulatory system with BasR |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,332,310 | 0 | C | T | 96.0%
| 1329.6
/ 29.5
| 404 | G321G (GGG→GGA) | basS | sensory histidine kinase in two‑component regulatory system with BasR |
| Reads supporting (aligned to +/- strand): ref base C (10/6); new base T (194/194); total (204/200) |
| Fisher's exact test for biased strand distribution p-value = 4.46e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.01e-01 |
Only 100 of 407 total aligned reads displayed.
GGTGGTCAGCAGCTTTCTTTATATCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAACCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCTTAATCATAATGTTGCTG > NC_000913/4332163‑4332457
|
gtggtCAGCAGCTTTCTTTATATCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAACCCCa < 1:278207/151‑1 (MQ=255)
tggtCAGCAGCTTTCTTTATATCTGGTTTGACACGTACTGATCTTTCTTCAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAAGTGCCCGGGATGCAACTGTGTAATGCGGGTGACAATAGTTATTCCCac > 6:393212/1‑150 (MQ=255)
ggtCAGCAGCTTTCTTTATATCTAGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAAtccc > 3:629997/1‑148 (MQ=255)
tCAGCAGCTTTCTTTATATCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGAcc > 4:499781/1‑151 (MQ=255)
agcagcTTTCTTTATATCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCaa < 6:325672/151‑1 (MQ=255)
gcagcTTTCTTTATATCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAAt > 2:1488606/1‑151 (MQ=255)
cagcTTTCTTTATATCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATc > 1:1336916/1‑151 (MQ=255)
cagcTTTCTTTATATCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATc > 4:1471945/1‑151 (MQ=255)
agcTTTCTTTATATCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATca < 4:456210/151‑2 (MQ=255)
gcTTTCTTTATATCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATccc > 6:566052/1‑151 (MQ=255)
gcTTTCTTTATATCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATccc < 8:1334420/151‑1 (MQ=255)
ctttctttATATCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATcccc > 8:361516/1‑150 (MQ=255)
cgttctttATCTCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCg > 6:1602629/3‑151 (MQ=255)
tttctttATATCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGc > 2:937539/1‑151 (MQ=255)
aatCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACgg < 6:1338435/150‑1 (MQ=255)
tCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCCATCCCGCGATAACGGCt > 1:10011/1‑151 (MQ=255)
ggTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCt < 5:646709/148‑1 (MQ=255)
tttGCCACGTACTGATCTTTCTTCAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTcc > 6:9141/1‑150 (MQ=255)
ttGCCACGTACTGATCTTTCTTCAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCAt > 3:1366814/1‑151 (MQ=255)
gCCACGTACTGATCTTTCTTCAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATAc < 5:921056/151‑1 (MQ=255)
cACGTACTGATCTTTCTTCAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAACCCCAGACCAATCCCGCCATAACGGCTGTCCATACGt < 5:1370416/151‑1 (MQ=255)
aCGTACTGATCTTTCTTCAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGCCAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGt > 2:729329/1‑150 (MQ=255)
cGTACTGATCTTTCTTCAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTAc > 4:875163/1‑151 (MQ=255)
aCTGATCTTTCTTCAGCGGTACCCAGGCCCTCGTGCCGTAAGTCTCTTGCCGTTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACaaa < 4:781737/151‑1 (MQ=255)
aCTGATCTTTCTTCAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACaa < 3:926945/150‑1 (MQ=255)
aCTGATCTTTCTTCAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAACCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACaa > 7:1110586/1‑150 (MQ=255)
cTGATCTTTCTTCAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAAc > 3:777138/1‑151 (MQ=255)
gATCTTTCTTCAGCCGTACCCAGGGCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAAc < 4:1085053/149‑1 (MQ=255)
gATCTTTCTTCAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGAAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCCGCTGACAATACTTAATCCCAGACCAATCCCGACATAACGGCTCTCCATACGTACAAACGc > 2:1625265/1‑151 (MQ=255)
tctttcttCAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCtt > 8:448223/1‑151 (MQ=255)
ctttcttCAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCttt > 3:1281580/1‑151 (MQ=255)
ctttcttCAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCttt > 3:1531154/1‑151 (MQ=255)
tttcttCAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCttt > 2:1445364/1‑150 (MQ=255)
ttcttcAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGCCCACTCCCGCCATAACGGCTGTCCATACGTACTAACGCTTTAc > 2:788300/1‑151 (MQ=255)
ttcttcAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTAc > 5:437371/1‑151 (MQ=255)
tcAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGTTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACt < 1:1689759/148‑1 (MQ=255)
tcAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACt < 1:394821/148‑1 (MQ=255)
tcAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCa < 1:634305/150‑1 (MQ=255)
tcAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCa < 7:1322520/150‑1 (MQ=255)
gTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCTTAACGGCTGTCCATACGTACAAACGCTTTACTCAACTcccc < 8:1083906/151‑1 (MQ=255)
gTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTcccc > 4:193042/1‑151 (MQ=255)
gTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTcccc < 1:1118357/151‑1 (MQ=255)
gTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTcccc < 3:24268/151‑1 (MQ=255)
gTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTcccc < 1:893174/151‑1 (MQ=255)
gTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTcccc > 8:1174192/1‑151 (MQ=255)
cccAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGc > 5:1617773/1‑150 (MQ=255)
aGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCAttt > 2:257195/1‑151 (MQ=255)
ggCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTa < 4:1659252/151‑1 (MQ=255)
cccGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTAct > 1:987027/1‑151 (MQ=255)
ccGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTActc < 5:502319/151‑1 (MQ=255)
ccGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACAGCCCGTGATCCAACTGTGTAAGGCGGCTGACAATACTGAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTActc > 5:181065/1‑151 (MQ=255)
ccGCGGGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACGGCCCGTGATCCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTActc < 7:944905/151‑1 (MQ=255)
cgcgTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTActct > 4:1216185/1‑151 (MQ=255)
gcgTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACtctc > 4:997494/1‑151 (MQ=255)
gcgTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACtctc > 6:260308/1‑151 (MQ=255)
gTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAACCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTTCAAACGCTTTACTCAACTCCCCGCATTTACTCtcat > 7:1552008/1‑151 (MQ=255)
gCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCtcatca < 8:1605953/151‑1 (MQ=255)
gCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCtcatc < 7:100296/150‑1 (MQ=255)
cGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAAt > 5:1128706/1‑151 (MQ=255)
ggAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATa < 2:1111689/151‑1 (MQ=255)
aGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCTCCATAACGGCTGTCGATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCt < 2:1541195/151‑1 (MQ=255)
aGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCt > 3:1091413/1‑151 (MQ=255)
gTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTg < 1:506597/151‑1 (MQ=255)
ctTGCCGGTTTTTCAGGAAAAACTGCCCGTGATGCAACTGTGTACTGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCTATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGt < 4:32265/149‑1 (MQ=255)
tGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCtt > 7:716497/1‑151 (MQ=255)
gCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTc > 7:868484/1‑151 (MQ=255)
ccgtgtttGCAGGAATACCTGACCGTTATGCAACTGTGGACTGCGGCTTACAATACTTCATCCCAGACCACTCCCGGCATAACGGCTGTCCATACGTACACACGCTTTACTCAACTCCGCGCATTTACTCTCATCATTACCTGGTCCTTCa < 6:1397873/146‑1 (MQ=255)
ccGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCa < 3:384568/151‑1 (MQ=255)
gTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCt < 5:271801/151‑1 (MQ=255)
ttttGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCtt > 1:1528738/1‑151 (MQ=255)
tttGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTc > 2:427604/1‑151 (MQ=255)
cAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACt < 7:252508/151‑1 (MQ=255)
aGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTg > 7:176276/1‑151 (MQ=255)
aGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAACCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTg < 7:659945/151‑1 (MQ=255)
aGGAAAAACTGCCCGTGATGCAACTGTGTAAGGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTg < 6:177560/151‑1 (MQ=255)
gAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGcc < 8:565545/151‑1 (MQ=255)
aaaCTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCGCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTAGTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATg > 2:353993/1‑151 (MQ=255)
gCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGAcc < 8:1539681/149‑1 (MQ=255)
gCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGAcc < 7:1162479/149‑1 (MQ=255)
gCAACTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCAtc < 6:676194/151‑1 (MQ=255)
aaCTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACTCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCAtctt > 8:737936/1‑151 (MQ=255)
aaCTGTGTAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCATTACTCAACTCCCCGCATTTACTCTCATCAATACCTCGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCAtctt > 2:54311/1‑151 (MQ=255)
tgtgTAATGCGGCTGACAATACTTAATCACAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATcttctt > 7:482912/1‑151 (MQ=255)
gtgtAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCAtcttct < 6:1272948/149‑1 (MQ=255)
gtgtAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCAtcttct < 5:1435361/149‑1 (MQ=255)
gtgtAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATcttctt < 5:1344238/150‑1 (MQ=255)
gtgtAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTg < 2:206760/151‑1 (MQ=255)
gtgtAATGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTg > 6:1008228/1‑151 (MQ=255)
aaTGCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGc > 2:1307413/1‑151 (MQ=255)
gCGGCTGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCtt > 5:823839/1‑150 (MQ=255)
tGACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCTTAATCAt > 6:1195255/1‑151 (MQ=255)
gACAATACTTAACCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCTTAATCa < 7:33672/149‑1 (MQ=255)
cAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTACTTGCAGCTTAATCATAAt < 8:229535/151‑1 (MQ=255)
aaTACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCTTAATCATAATg > 7:1252569/1‑151 (MQ=255)
aTACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCTTAATCATAATGt < 5:1205448/151‑1 (MQ=255)
aCTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCTTAATCATAATGtt < 3:1455688/150‑1 (MQ=255)
cTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCTTAATCATAATGTtgc > 6:837939/1‑151 (MQ=255)
ttAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCTTAATCATAATGTtgct > 3:1620065/1‑151 (MQ=255)
ttAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCTTAATCATAATGTtgct > 1:1217981/1‑151 (MQ=255)
tAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCTTAATCATAATGTtgctg > 1:791982/1‑151 (MQ=255)
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GGTGGTCAGCAGCTTTCTTTATATCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGGCCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCCGTGATGCAACTGTGTAATGCGGCTGACAATACTTAACCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCTTAATCATAATGTTGCTG > NC_000913/4332163‑4332457
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
