Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F84 I10 R1
|
267 |
426.1 |
13521957 |
97.0% |
13116298 |
150.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,366,668 |
C→T |
A36T (GCC→ACC) |
dcuA ← |
C4‑dicarboxylate antiporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,366,668 | 0 | C | T | 97.0%
| 1338.3
/ 19.2
| 399 | A36T (GCC→ACC) | dcuA | C4‑dicarboxylate antiporter |
| Reads supporting (aligned to +/- strand): ref base C (7/5); new base T (189/197); total (197/202) |
| Fisher's exact test for biased strand distribution p-value = 5.70e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.00e-01 |
Only 100 of 399 total aligned reads displayed.
TCGGGTTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGTTTTTTAACAAGTTGATATTAGATTGTT > NC_000913/4366521‑4366815
|
tCGGGTTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAAGGGGATGTTACCGGGTTTAACGCCAATAGCGGTaa < 5:579145/150‑1 (MQ=255)
ttACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAAcc > 4:723720/1‑150 (MQ=255)
gtACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGAGAGTCCAGACCGCCACCACCCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCa < 2:538435/150‑1 (MQ=255)
tACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCa < 1:18946/150‑1 (MQ=255)
cGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGcc > 7:1083225/1‑150 (MQ=255)
cagcagCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCAccccc > 1:1374970/1‑151 (MQ=255)
agcagcTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCAccccc > 4:127436/1‑150 (MQ=255)
agcagcTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCa < 1:1270555/151‑1 (MQ=255)
cagcTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAAt > 6:377348/1‑151 (MQ=255)
agcTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCGGCCCCCATc > 4:831849/1‑151 (MQ=255)
gcTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCACTcc > 3:653929/1‑151 (MQ=255)
gcTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATcc < 2:647735/151‑1 (MQ=255)
gcTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATcc < 3:782467/151‑1 (MQ=255)
gcTTTTCTGTCTCATGAACCAGATAGTCCAGACAGCCAGCAACATGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATCTTACCGGGTTAAACGCCAATAGCGGTAAGAACCAGCACCCCCAATcc > 5:1257939/1‑151 (MQ=255)
cTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCCATCCg > 8:662618/1‑151 (MQ=255)
ttttCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGc > 1:678556/1‑151 (MQ=255)
tttCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCg < 7:1287115/149‑1 (MQ=255)
tgtctgATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGc > 4:1409960/1‑150 (MQ=255)
gatgaACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAAc < 4:533717/150‑1 (MQ=255)
gaACCAGATATTCCAGACCGCCAGCAACCTTCATGGCAGAAATATCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGTATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCaa < 6:1197877/150‑1 (MQ=255)
gaACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCCCTCCGCCTGCAAAACCAAt > 8:1287339/1‑151 (MQ=255)
gaACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAAt < 8:26334/151‑1 (MQ=255)
gcgaatcgTCCAGATCGCCAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGCACCAGCACCCCCAATCCGCCTGCAACACCAATAcc > 4:937055/8‑151 (MQ=255)
ccAGATAGTCCAGACCGCCAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATAcc < 2:79144/151‑1 (MQ=255)
ccgATAGTCCAGACCGCCAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCt < 2:153042/149‑1 (MQ=255)
cAGATAGTCCAGACCGCCAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAACCCAATAccg > 5:1570708/1‑150 (MQ=255)
aGATAGTCCAGACCGCCAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCCCCCCCCCTCCGCCTGCAAACCCCATACCt > 8:340735/1‑150 (MQ=255)
gATAGTCCAGACCGCCAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTAt < 4:1641429/151‑1 (MQ=255)
gATAGTCCAGACCGCCAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTAt < 5:265355/151‑1 (MQ=255)
ccAGACCGCCAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAAGCCGCCTGCAACACCAATACCTATTccccc > 8:1103253/1‑151 (MQ=255)
cAGACCGCCAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGAAAAACCACTAcatctaccaccc > 1:817211/1‑140 (MQ=255)
aCCGCCAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAAt < 3:464587/151‑1 (MQ=255)
ccGCCAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATc < 5:1139695/151‑1 (MQ=255)
cGCCAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAACCCAATACCTATTCCCCCCAATCt > 4:29169/1‑151 (MQ=255)
cGCCAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCt > 7:1221436/1‑151 (MQ=255)
gCCAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCCCCCCCACTCCGCCTGCAAAACCACTACCTATTCCCCCCACTCTg > 8:1403359/1‑151 (MQ=255)
cAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCCCCCCCAATCCGCCTGCAACACCAATACCTATTCCCCCCAATCTGgc > 3:1017591/1‑151 (MQ=255)
cAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCCCCCCCAAGCCGCCTGCCAACCCAAGACCTATTCCCCCCAATCTGGCGcc > 3:1507200/1‑151 (MQ=255)
cATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCCCCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCaaga > 4:1068399/1‑149 (MQ=255)
cATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAACACCAATCCCTATTCCCCCCAATCTGGCGCCCaaga > 2:961172/1‑149 (MQ=255)
cATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCaaga > 7:894847/1‑149 (MQ=255)
aTGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATAGAACTGGATGTTACCGGGTTTAACGCAAATAGCGGTAAGAACCAGCACCACAAATCCGCCTTCAAAAACAATAAATATAACACCCAAACAGGCGACCaaga > 1:464265/1‑148 (MQ=255)
gCAGAAATAGCGGCGATAACAGCCATGATAATGGAGATGACATGGAACTGGACGTTACCGGGTTTAACGCCAATAGGGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCg < 2:1207499/151‑1 (MQ=255)
gAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCCATCCGCCTGCAACACCACTACCGATTCCCCGCAATCTGGCGCCCAAGAAGCTCGcc > 4:1563285/1‑150 (MQ=255)
aaaTAGCGGCGATAACCTCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAg < 3:55755/151‑1 (MQ=255)
aTAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCa < 7:958821/151‑1 (MQ=255)
aaGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCaa < 6:634377/150‑1 (MQ=255)
aGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCaaa < 7:208955/151‑1 (MQ=255)
aGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCaa < 5:671664/150‑1 (MQ=255)
cggcgATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCGCCCCCAATCCGCCTGCTAAAGCAATACCTATTCCCCCCAATCTGGCGCCCAAGATGATCGCCAGCAAAAc > 6:1101930/1‑151 (MQ=255)
cggcgATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAAc < 5:84534/151‑1 (MQ=255)
ggcgATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACt < 7:390366/151‑1 (MQ=255)
gcgATTACCTCCATGATAATTGAGATGACATCGAACGTGATTTTACCGGTTTTAACGCCAATATCGTTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCTCCAGCAAAACTa < 6:932916/151‑1 (MQ=255)
gcgATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTa < 7:151859/151‑1 (MQ=255)
aTAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGGACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACAatg > 6:1560642/1‑150 (MQ=255)
aCCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTatgatg > 6:1244755/1‑150 (MQ=255)
ccGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTatgatg > 6:1303611/1‑149 (MQ=255)
aTGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTa < 3:212540/151‑1 (MQ=255)
aTGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCGGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTcg > 3:1167899/1‑149 (MQ=255)
aTAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCCCCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACa > 5:77577/1‑150 (MQ=255)
tAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCCCCCCCAATCCGCCTGCAAACCCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGCTCGCCAGCAAACCTATGATGAGTTCTACAAc > 3:1380410/1‑151 (MQ=255)
aaTGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGCTCGCCAGCAAAACTATGATGAGTTCTACAACt > 7:508368/1‑151 (MQ=255)
aaTGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTAGTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACt > 2:883199/1‑151 (MQ=255)
aTGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTa < 8:464856/151‑1 (MQ=255)
ggAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAACCCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGc > 5:957949/1‑151 (MQ=255)
gagaTGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCGCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTCGCGCCCAAGCAGATCGCCAGCAAAACTATGATCAGTTCTACCACTAGc > 6:519093/1‑150 (MQ=255)
gagaTGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCa < 1:1189797/151‑1 (MQ=255)
gagaTGACATCGAACGGGATGTTACCCGGTTTAACGCCAAAAGCGGTAAGAACCAGCCCCCCCAGTCCCCCGGCAAAACCAATACCAATTGCCCCCAAACTGGCGCCCAAGAAGATGGCCCGCCAAACTATGAAGAGTTGGACAGCTAgg > 1:1687654/1‑149 (MQ=255)
aTGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCatat < 7:591121/151‑1 (MQ=255)
tGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATAtt > 8:715415/1‑151 (MQ=255)
gACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTa < 5:1411869/151‑1 (MQ=255)
gACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTa < 1:337429/151‑1 (MQ=255)
aCATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAg < 5:1659411/151‑1 (MQ=255)
gAACGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGacttc > 2:693486/1‑151 (MQ=255)
aaCGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATCCCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGccttcc > 2:1625595/1‑151 (MQ=255)
aCGGGATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGccttcct < 1:593538/151‑1 (MQ=255)
gggATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTg < 1:1446959/151‑1 (MQ=255)
gggATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTg < 3:1264479/151‑1 (MQ=255)
ggATGTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGt < 2:218461/151‑1 (MQ=255)
gTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCTCCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGtttt < 1:1110699/150‑1 (MQ=255)
gTTACCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGtttt < 6:185301/150‑1 (MQ=255)
aCCGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAACCCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGTTTTTTa > 1:946150/1‑150 (MQ=255)
cGGGTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGTTTTTTAACa < 3:708749/151‑1 (MQ=255)
gTTTAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCTCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGTTTTTTAACAAGt < 6:1656063/151‑1 (MQ=255)
ttAACGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGTTTTTTAACAAGtt < 1:1573367/150‑1 (MQ=255)
aaCGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGTTTTTTAACAAGTTGat < 2:360585/151‑1 (MQ=255)
aaCGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGTTTTTTAACAAGTTGat < 2:184975/151‑1 (MQ=255)
aaCGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGTTTTTTAACAAGTTGat > 4:343320/1‑151 (MQ=255)
aaCGCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGTTTTTTAACAAGTTGa < 7:76043/150‑1 (MQ=255)
gCCAATAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGTTTTTTAACAAGTTGATAtt < 4:212132/151‑1 (MQ=255)
cccAATAGAGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGTTTTTTAACAAGTTGATAtt < 2:1285349/150‑1 (MQ=255)
aaTAGCGGTAAGAACCAGCCCCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGTTTTTTAACAAGTTGATAtt > 5:363435/1‑148 (MQ=255)
aaTAGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGTTTTTTAACAAGTTGATAtt > 6:77733/1‑148 (MQ=255)
aaTACCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGTTTTTTAACAAGTTGATATTAGa < 1:1074791/151‑1 (MQ=255)
aTAGCGGTAAGAACCAGCACACCCAATCAGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCACAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGAATATTACCCTACCTTGTTTTTTAACAAGTTGATAtt > 1:889596/1‑147 (MQ=255)
aGCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGTTTTTTAACAAGTTGATATTAGATTg > 4:633327/1‑151 (MQ=255)
gCGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGTTTTTTAACAAGTTGATATTAGATTGt < 7:1415889/151‑1 (MQ=255)
ccGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGTTTTTTAACAAGTTGATATTAGATTGt < 3:895675/150‑1 (MQ=255)
cGGTAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGTTTTTTAACAAGTTGATATTAGATTGtt > 1:905925/1‑151 (MQ=255)
cGGTAAGAACCAGCACCCACAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGTTTTTTAACAAGTTGATATTAGATTGtt < 8:1538910/151‑1 (MQ=255)
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TCGGGTTACGGCGCAGCAGCTTTTCTGTCTGATGAACCAGATAGTCCAGACCGCCAGCAACCTGCATGGCAGAAATAGCGGCGATAACCGCCATGATAATGGAGATGACATCGAACGGGATGTTACCGGGTTTAACGCCAATAGCGGCAAGAACCAGCACCCCCAATCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTGTTTTTTAACAAGTTGATATTAGATTGTT > NC_000913/4366521‑4366815
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
