Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F84 I10 R1
|
267 |
426.1 |
13521957 |
97.0% |
13116298 |
150.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,489,775 |
C→T |
V97M (GTG→ATG) |
yjgR ← |
DUF853 family protein with NTPase fold |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,489,775 | 0 | C | T | 95.2%
| 1141.6
/ 32.8
| 354 | V97M (GTG→ATG) | yjgR | DUF853 family protein with NTPase fold |
| Reads supporting (aligned to +/- strand): ref base C (9/8); new base T (171/166); total (180/174) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.12e-01 |
Only 100 of 367 total aligned reads displayed.
AGCCCCTGATCGTCAGCAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCG > NC_000913/4489627‑4489921
|
cccTGATCGTCAGCAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCAcatcacca < 7:1072110/151‑1 (MQ=255)
gATCGTCAGCAATGCGGAAGATGATATTCAGCACGCCAGATTGGACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCgg < 5:1508306/151‑1 (MQ=255)
gATCGTCAGCAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACatcaccacc < 5:1330742/149‑1 (MQ=255)
gATCGTCAGCAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCgg < 1:932858/151‑1 (MQ=255)
gATCGTCAGCAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCgg > 5:640300/1‑151 (MQ=255)
aTCGTCAGCAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCgg > 7:453879/1‑150 (MQ=255)
aTCGTCAGCAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCCGATGGCCTTTCTCGCCAAACATATCCCACATCACCACCgg > 8:948865/1‑150 (MQ=255)
cGTCAGCAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCGCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGAt < 6:851067/150‑1 (MQ=255)
gacAGCAAAGCGGATGATGATATTCATAACGCGAGATAGCACATCGTTGAGATTCAACACTCGTGCCAGCAACAGCGGCCCCAGAACCGAAACCGTCGACCGCACCGCATGGCATATCACGCCAAAGATATCGCACATCACCACCCGATTg > 4:1371491/3‑151 (MQ=255)
cAGCAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGc > 4:904399/1‑151 (MQ=255)
cAGCAATGCGGAAGATGATATTCAGAACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCTGATCCGATACCGGCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGc < 4:1652581/151‑1 (MQ=255)
aGCAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGc > 6:220266/1‑150 (MQ=255)
gCAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCAt < 7:628156/151‑1 (MQ=255)
cAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATg < 7:1562717/151‑1 (MQ=255)
cAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATg > 4:362237/1‑151 (MQ=255)
cAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATg > 3:286913/1‑151 (MQ=255)
cGGAAGATGATATTCGGCCCGCAGGATTGCACATCGTTGAGATGCAACATTCGTCCCAGCAACAGCGGCCCCACATCCGAACCCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATAACCCACATCACCACCGGATTGGCATGCGGtt > 2:1336180/1‑151 (MQ=255)
cGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGtt < 5:699050/151‑1 (MQ=255)
cGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGtt < 4:767518/151‑1 (MQ=255)
ggAAGTTGATATTCTTCTCGCCAGATTCGACATCTTTGAGATTCAACAGTCTTGCCAGCAACAGCGGCCCTAGATCCGAAACCTTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTg < 6:1625776/151‑1 (MQ=255)
gAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGc > 8:728743/1‑151 (MQ=255)
gatgatATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAg < 5:1681577/151‑1 (MQ=255)
atTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTg < 1:1173593/151‑1 (MQ=255)
cAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGAc < 6:335768/150‑1 (MQ=255)
cAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACg > 8:619476/1‑151 (MQ=255)
cAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCCTGCCAGCAACACCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGAc < 5:881958/150‑1 (MQ=255)
ccACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGcc < 3:1239769/150‑1 (MQ=255)
cGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGat > 7:1200893/1‑151 (MQ=255)
gCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGat > 6:453758/1‑150 (MQ=255)
gCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGat > 3:769925/1‑150 (MQ=255)
cAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATAtt < 1:1002901/151‑1 (MQ=255)
aTTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGTCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATAttttt > 5:321715/1‑151 (MQ=255)
ttGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATAttttt > 3:1172500/1‑150 (MQ=255)
gCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAg < 7:1016138/151‑1 (MQ=255)
gCACATCGGTGAGATTCAACAGGCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTaa < 2:1248104/150‑1 (MQ=255)
cacaTCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGc < 2:664447/151‑1 (MQ=255)
caTCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCt < 2:1131075/151‑1 (MQ=255)
aTCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCtt > 6:130476/1‑151 (MQ=255)
cGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTg < 2:1082311/150‑1 (MQ=255)
cGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGc > 7:1131043/1‑151 (MQ=255)
cGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGc > 3:19914/1‑151 (MQ=255)
cGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCATTGc > 1:720380/1‑151 (MQ=255)
tGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGa < 2:1595094/150‑1 (MQ=255)
tGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGa < 4:502806/150‑1 (MQ=255)
gagaTTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGc > 4:312215/1‑151 (MQ=255)
agaTTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCa < 8:144342/151‑1 (MQ=255)
ccacacTCGTGCCAGCAACCGCGGCCCCAGACCCGCCACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGtttt < 6:1669843/149‑1 (MQ=255)
cAACAGTCGTGCCAGCAACAGCGGCCCCAGCCCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGtttt > 1:984937/1‑151 (MQ=255)
cAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGtttt > 8:1647764/1‑151 (MQ=255)
cAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGtttt < 3:903974/151‑1 (MQ=255)
cAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGtttt < 6:1215501/151‑1 (MQ=255)
cAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGAGATTTTTAAGCCTTGCGAGCAGtttt > 2:268349/1‑151 (MQ=255)
cAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCCTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTcc < 1:1253759/151‑1 (MQ=255)
aGTCGTGCCAGCAACAGCGGCCGCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCg < 2:899347/151‑1 (MQ=255)
cGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGaca < 3:443516/151‑1 (MQ=255)
cGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGac > 8:1518646/1‑150 (MQ=255)
gCCAGCAACAGCGGCCCCAGAGCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCg < 1:809573/151‑1 (MQ=255)
cAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTcct < 3:1401033/151‑1 (MQ=255)
aaCAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTcctg > 3:1335194/1‑151 (MQ=255)
cAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTcctgcc < 3:1617976/151‑1 (MQ=255)
gCCCCAGAGCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACGGTTCCTGCCTgcgc < 4:1517450/151‑1 (MQ=255)
aGATCCGAAACCGTCTCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGACGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGc < 1:192221/151‑1 (MQ=255)
tCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCgg > 6:59598/1‑151 (MQ=255)
gAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTc > 6:1513438/1‑150 (MQ=255)
gAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTc > 1:538711/1‑150 (MQ=255)
gAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTc > 7:834054/1‑150 (MQ=255)
aaaCCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCAGATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTc > 7:947842/1‑149 (MQ=255)
aaCCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGa < 7:1434298/151‑1 (MQ=255)
gTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGc > 2:1308491/1‑151 (MQ=255)
gCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCtt < 5:464759/151‑1 (MQ=255)
gCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCtt > 3:63602/1‑151 (MQ=255)
cccGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCttt > 2:1561539/1‑151 (MQ=255)
ccGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATc > 8:1210534/1‑151 (MQ=255)
ggATGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATc > 5:390318/1‑149 (MQ=255)
tGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGGTCGCCTTTCACATCAGcc > 5:910445/1‑150 (MQ=255)
tGGCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGcc > 7:1359800/1‑150 (MQ=255)
ggCCTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCAt > 2:589578/1‑151 (MQ=255)
ccTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATaa < 1:151959/151‑1 (MQ=255)
cTTTCTCGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATaa > 6:1035044/1‑150 (MQ=255)
ttCTCGCCAAAGATATCCCACATCACCACCGGATTGGCACGCGGTTGCCAGTCATTGACGCCGATATATTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAac < 4:1059763/150‑1 (MQ=255)
tctcGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAaca < 7:360494/150‑1 (MQ=255)
ctcGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACAcc > 8:386725/1‑151 (MQ=255)
gcGCCAAAGATCTCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCg < 1:402452/150‑1 (MQ=255)
cGCCAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAacac < 8:826606/148‑1 (MQ=255)
ccAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGc > 1:362322/1‑150 (MQ=255)
ccAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCa < 5:1082020/151‑1 (MQ=255)
cAAAGATATCCCCCATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCAc > 7:743984/1‑151 (MQ=255)
cAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCAc < 7:153825/151‑1 (MQ=255)
cAAAGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCAc > 8:1060511/1‑151 (MQ=255)
aaaGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACg > 6:70393/1‑151 (MQ=255)
aaaGATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACg < 3:1594600/151‑1 (MQ=255)
gATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCg < 8:527314/151‑1 (MQ=255)
gATATCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCg < 7:237284/151‑1 (MQ=255)
atCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGAtt < 2:424068/151‑1 (MQ=255)
atCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGAtt > 1:1476766/1‑151 (MQ=255)
atCCCACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGAtt < 4:1131840/151‑1 (MQ=255)
atCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGAtt < 6:144747/151‑1 (MQ=255)
cccACATCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTc < 8:321204/151‑1 (MQ=255)
cacaTCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCg < 5:8344/151‑1 (MQ=255)
cacaTCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCg > 7:175989/1‑151 (MQ=255)
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AGCCCCTGATCGTCAGCAATGCGGAAGATGATATTCAGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCGCACCGGATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCG > NC_000913/4489627‑4489921
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
