Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F92 I0 R2
|
37 |
124.6 |
2246525 |
89.6% |
2012886 |
283.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
2,173,361 |
Δ2 bp |
100% |
pseudogene (1‑2/442 nt) |
gatC ← |
pseudogene, galactitol‑specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol‑specific enzyme IIC |
| |
seq id |
position |
change |
freq |
score |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,173,361 | 0 | C→. | 100.0%
| 16.5
| 115 | pseudogene (2/442 nt) | gatC | pseudogene, galactitol‑specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol‑specific enzyme IIC |
| Reads supporting (aligned to +/- strand): new base (55/52): ref base (4/4): total (59/56) |
| Fisher's exact test strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.05e-03 |
| * | NC_000913 | 2,173,362 | 0 | C→. | 100.0%
| 15.7
| 115 | pseudogene (1/442 nt) | gatC | pseudogene, galactitol‑specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol‑specific enzyme IIC |
| Reads supporting (aligned to +/- strand): new base (55/51): ref base (2/5): total (59/56) |
| Fisher's exact test strand distribution p-value = 2.71e-01 |
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 6.97e-04 |
Only 100 of 121 total aligned reads displayed.
GGTAATGGGAGAACCGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCACCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCACAA‑AACCCACGGTGACAGGCTCGCCAAATGGACCAAATTTGCGCTGAATATCGTCGGCGCTAAATTTAATTC > NC_000913/2173062‑2173662
||
ggTAATGGGAGAACCGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCAACGATGCAAGGCGAACGCCGTCGCAACGAAGACGCCGAGGCTGCCAAGATCGACAACGGGAAGCACCGGAGTAACCGGGACAAAA‑AC‑AGCAAGTAAAAGTGTGAGGGGGAGAAAAATGCGGCTTGCAGATcccac > 1:758832/1‑300 (MQ=255)
tGGGAGAACCGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCCATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTCAGGTGCGGAACAGATTTCCACGATGCACGGCGCCCCCCATCGCCACGACGAAGCCGTTGGTGGCACGATTCCCAAACGGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAATACAAATGGTGAGTGCGTTAAAAATCAGGCTTTCCGCTACCACCccgtt > 1:503184/1‑299 (MQ=255)
tGGGAGAACCGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCCCACAC‑AC‑CGCAATTAAAATGGTGAATGGGCTAAAAAGCCGGCTTGCCGAAacaacagccca > 2:103694/1‑295 (MQ=255)
gggAGAACCGCTCTGTTCCGTTGAAGCAACCACACACACGGCTTTGAACGCCCCAGCATTATACGCCAGTTGGGGAGGCAAACCAAGAGTTGGCGTCGCGCTCTAGTGTGTGGTGCTCATAATGATGACACACGAGAGTAAGGTGCGGAACAGATGTCCACGATGCACGGCGACCGCCATCGCCAGGAAGAAGGCGAGGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACTCAA‑AC‑CGCATTTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATaccaccgccg < 2:757455/299‑5 (MQ=255)
atgggtagaagaggaagatagAAGCCACCATACGCACGGCTTGTAACGCCGCAGCATTAGCCTCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGGTCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATaccaccgccgtat < 1:571783/280‑8 (MQ=255)
aaCCGCCCGGATCCATTTAAGCCACCATACCCCCCGATTTTAACGCCCCAACAATAGCCGCCAGTTGGGTGTGCAAACCAATAGGTGGCGTCGCGAGCAACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTc < 2:683838/300‑1 (MQ=255)
gCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTACGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAACAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCcaga > 1:606426/1‑300 (MQ=255)
ctgacacATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAAACAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGAGTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCagcagc < 1:639480/295‑1 (MQ=255)
aTTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGCTGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCCAGATCGCCAAACGGCAGCCCCTGATTACCCGGCACACAC‑AC‑AGCACTTAAACTGGTGCGTGGAAGAAAAATACGGCTTGCCGATACCACCC‑‑CCGTATCTCCCACCAACACCGcc > 2:934690/1‑300 (MQ=255)
aTTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCCCCCAA‑AC‑AGCAATTACAATGGGGAGTGGGATAAAAATCAGGCTTGCCGAAcccaccgccgtacccttcccttttacacat > 2:571772/1‑276 (MQ=255)
actccacccTCCCCCCCGCTTTTCACGCCCCCGCAATAGCACGCAGTTGGGTATGCAAACAAATAGTTTGCGTCGCGATCACCAGGGTGATGCTCATAAGGATGACACCCGAGATTAAGGGGCGGAACAGATTTCCGCGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATc < 2:606415/298‑1 (MQ=255)
ccaccaTACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCACCAAACGGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGCTACCA‑‑CCGCCGTATGTCCCAGCAGCCACGCCGGacccag > 2:1023854/1‑296 (MQ=255)
ccaTACCCCCGGCTTGTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGCGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCACGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAC‑AC‑AGCAATTCAAATGGTGAGTGGGAAAAAAATCAGGCTTGCCGATACAA‑‑CCGCCGTATGTCCCCGCAGCCACGCCGGATCAAGGca > 2:70947/1‑300 (MQ=255)
cccccGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACCGGGTGATGCTCATAATGCTGACACCCGAGATTAAGGTGCGGCACAGCTTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACCA‑AC‑AGCAATTAAAATGGTGAGGGGGATAAAAATCAGGCTTGCAGA‑ACC‑CACCACCGTATTCCCCAGCAGCACCGCCGGATCAAGGCCAAACa > 2:666054/1‑301 (MQ=255)
gCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTTTGCAAACCAATAGTTTGCGTCGCTATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCTCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGAAGCACGTGATTACCCGGCACACAA‑AC‑AGCAATTACAATGGTTACTGGGATAAAAATCATGCTTGCAGATACCA‑‑CCGCCGTATGTCACAGCAGCAACGcggtctcacggcacatcaagca > 1:1031415/1‑278 (MQ=255)
gCTTTAAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCCCCTGATTACCCGGCCAGCAC‑AC‑AGCAATTAAACTGGGGAGGGGGAGAAAAATCAGGCTTGCCGATCCCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGAACAAGGCCAATCAGGAAc > 2:447568/1‑300 (MQ=255)
gCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGGATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCCGGAACTCCTGACCACCGaa > 1:469477/1‑299 (MQ=255)
ttAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGGGAGTGGGATAAAAATCAAGCTTGCCGATACCA‑‑CCACAGTATGCCCCAGAAGCAACGCCGGATCAAGGCCAAGCAGGAACTCCTGACGCCCAAACTTc > 1:519513/1‑300 (MQ=255)
ccAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCCCACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGAAGCAACGCCGGACCAAGGCCAATCAGGAACCCCTGACCGCCCAACTTCGCCtcaca > 2:957319/1‑297 (MQ=255)
ccAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTaa > 1:1061942/1‑301 (MQ=255)
aaaaccaaaagttgtcgcagacacccccatggTGAGGGTAATAATGTGGACACCCGAGATTAAGGTGCGGACCACATTGCCACGTGGAACGACGACCGCCATCGCCACGACGGAGACGATGGTGGCAAGATCGCCAAACGGCAGCAACTGATGACCCGGCACACAA‑CC‑AGCGATTAAAATGGTGCGTGCGATAAAAATCAGGCTTGCCGGTACCA‑‑CCGCCGTATGTCCCAGCAACAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCACCTGTGAACGACTACGAGcc < 2:177814/271‑1 (MQ=255)
aaCCAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATCCCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAACCGACTACGAGCATg > 1:735018/1‑301 (MQ=255)
ccAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAATTCAAATGGTGAGTGGGCTAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTCACCGCCGAACTTCGCCTCTAACCGACTACCAGCATg > 1:358084/1‑299 (MQ=255)
ccAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCCGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCATg > 1:748337/1‑299 (MQ=255)
aaacagtatgaatctcgcaacacaTGGTAGTGCTTATAATGATGCAACCATAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCTACCTCCATCGCTACGAAGAAGCCGCTGGTAGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACTCCGGATCAAGGCCAATCAGGAACTTCTGACCGCCGAACGTCGCCTGTAAACGACTACGAGCCTGCtt < 2:291308/281‑1 (MQ=255)
aaaTAGTTAGCGGGGCGATCAAAAGGGTGAGGCTCAAAATGATGAAACCCAGGATTAAGGTGAGGAACAGAGGTCCACGATGGACGGCGACCGCCATCGCCACGAAGAAGACGATGGTGGCAAGATCGCCAACCGGCAGCACCTGATTACCCGGAACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCtt < 1:442744/300‑1 (MQ=255)
gTTGGCGACGCGATCCACAGGGTGAGGCTCAGAATGAAGACACCCGAGATTAAGGTGCGGAACAGATGTCCACGAGGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAATTAAAAGGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCg < 1:1023884/300‑1 (MQ=255)
ttggCGTCGCGATCCACGGGGTGATGCGAATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCAACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGAGGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGa < 1:934719/297‑1 (MQ=255)
acccaaaggtggagtgtaaTAATGAGGCCACCCGAGATGAAGGGGCGGAACAGAGTGCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATGACCCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AAc < 2:1061910/283‑1 (MQ=255)
acccACAGTGTGATGCTCATAATGATCACCCGCTCGATTAAGGTGCTGAACCGATTTCCACAATGCACGGCGACCGACATCGCACCCAAGAAGCCGACGGTGGCAAGATCGCCAAACGGCAGCACCTGATGACCCCGCACACAA‑AC‑AGCAATTAAAATGGAGAGGGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCCACGCCGGATCAAGGCCAATCAGGAACTCCTGATCGCCGAAATTAGCCTGTAAACGACTGCGAGCCTGCTTAGCGATGGGCGTTA‑AAc < 1:786277/299‑1 (MQ=255)
aTCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAACCGGCAGCACCTGATTACCCGGCACACAA‑CC‑CGCACTTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATCCCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGTATCCAGGCCACTCAGGAACTCCGGCCCACGGACCTTCGCCTGTGAACAACTACGCGACTGCTTGGCGAGGGGCGTTa‑ac > 1:948751/1‑299 (MQ=255)
aTCCACAGGGTGATGCTCATAATGATGACACACGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AAc < 1:498854/301‑1 (MQ=255)
ccACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCCGCAACGCCGGATCCAGGCCAATCAGGATCTCCTGACCGCCGAACTTCGCCTGTAAAc > 1:667223/1‑266 (MQ=255)
ccACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AAcc > 1:164848/1‑300 (MQ=255)
ccACAGGGTGATGCGCATAATGATGACACCCGAGATTAAGGGGCGGAACAGATTTCCACGAGGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AAcca < 1:649520/301‑1 (MQ=255)
ccAAAGGGGGATGCGCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGATGGCAAGATCGCCAAACGGCAGCACCTGATGACCCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AAc < 1:387033/299‑1 (MQ=255)
ggTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAC‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCCGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCCGCAGCAACGCCGGATCAAGGCCAATCCGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGCCTACGACCCTGACTAGCCATGGCCGTTA‑ACccctccatt > 2:426402/1‑300 (MQ=255)
gTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAACGGGCAGCACCTGATTACCCGGCAAACAA‑AC‑AGCAATTAAAACGGTCAGCGGGATAAAAATCAGGCTTGCCGATACCA‑‑CAGACGTATGTCCCCGCCGCAACGCCGAACCAACGCCAATCACGACCTCCTCACCGCCGCCCCTACCCTGTACACGACTACCAGCCTGCTCCGCGATCGGCCTTACAACCA‑CCatga > 2:765009/1‑301 (MQ=255)
gTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGAGCGCCAAACGGCAGAACCTGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGGGAGTGGGATAAAAATCAGGCTTGACGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCAGGAGCACGGCAAATCAGGAACTCCTGACCGCCGAACTGCGCCTGTAAACGACTAAGAGCCTGCCTAGAGAGGGGCGTAC‑AAccatcaatta > 1:122563/1‑299 (MQ=255)
gatgaCACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGACTTGCCGATACCA‑‑ACGCCGTATGTCCCAGCAGAAACGCCGGATCAAGGCCAATCGGGAACTCTTCACCCCCGACCTCCGCCTGTAACCGCCTCCAAGCCTGCTCAGCCATGGCCGTTA‑CACCATCCATGCAGGCTTTAATccc > 1:352378/1‑298 (MQ=255)
ccggagaCTAAGGTTCGGAACAGATTGCCACGATGCACGGCGACCGCAATCGCCACGAAGAAGCCGATGGTGGCAAGATCTCCAAACGGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCa < 1:957349/298‑1 (MQ=255)
cccgtgcatAAGGTGCGGAACAAATTCCGACGCGGCACAGCGACCGCCGTCGCCACGAAGAAGCCGATGGTGGGAAGATCGCCAAACGGCAGCACCGGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGTTGGAGGGATAAAAATCAGGCTCGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCa < 2:8875/293‑1 (MQ=255)
agaTTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGGGGGATAAAAATCAGGCTTGCAGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCAAATCAGGAACTCCTGCCCGCAGAACTTCGCATGTAAACGACTAAGAGCCGGCTGCTCGATGGGCGTTA‑AACCCTCCGTGATGGGTTTAGTCACACGTGGCATTag > 1:730868/1‑301 (MQ=255)
taTTAAGGTGAAGCACAGAATGCCACGGTGGACGGCGACCGTCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAACTAAAATGGTGAGTGGGATAAAGATCAGGCTTGCCGATACCA‑‑CCGCCGTATGGCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCATTagc < 1:77904/300‑1 (MQ=255)
aaTTAAGGTGCGGAACAGATTTCCACGATGACCGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCATTagc < 1:116391/300‑1 (MQ=255)
ttgtgtaacagattgtgtcGATGCACGGTGATGGCCATCGCCTCCAATAAGGCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAATTAAGATTGCGAGTGGGAGTACAATCAGGCTTCCCGATACCA‑‑CCGCCGTATGTACCAGCAGCAACGCCGGATCAAGGCCACTCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCAt < 1:1073667/281‑1 (MQ=255)
gTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGACTGCTTAGCGATGGGCGTTA‑CACCATCAATGATGGGTTTACTCACCCGTGGCCTTAGCAGAATCa > 1:1056258/1‑301 (MQ=255)
gCGGAACAGATTTGCACGATGCACGGCGACCGCCATAGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACGCGGCACACAA‑AC‑AGCAATGAAAATGTTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCAc < 1:646629/300‑1 (MQ=255)
cGGAAACGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTcc < 2:728617/198‑1 (MQ=255)
ggttgcaaagacgaacgcggACCGGCATCGCGAAGAAGAAGGCGGGGGTGGCAAGAGCGCCAAACGGCAGGACCTGATGACCCGGCACACAA‑AC‑AGCAATGAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGGATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGccgccg < 2:1103516/281‑1 (MQ=255)
aTGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACTGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATCCCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCCCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTC‑ACCCATCCATGATGGGCTTAATCACCCGCGGCTTTGGCAGCATCATTACCCCATTTTTTCCCGc > 1:140147/1‑300 (MQ=255)
aacacgcaccGCCACGAAAAGGCCGAAGTTGGCAAAACCGCCAAACGGAAGAACCTGATTAACCGGCACACAA‑AC‑AGCAATTAAAATGTGGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAAt < 2:519506/292‑1 (MQ=255)
cccccATCGCCACGAAGAAGCCGAGGGTGGAAAGAACGCCAAACGGAAGCACCTGATTCCCAGGCACAGAA‑AC‑AGCAAGTAAAATGATGAGTGGGATAAAAATCAGGCTGGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAGCGCCGGATAAAGGACAAGCAGTAACTCCGGACCGCCGAACTTCGCCTGTAAAGGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATac < 2:734992/298‑1 (MQ=255)
cccACCGCCACGAAGAAGCAGATGGGGGCAAGAACGCCAAACGGGAGCACATGATTACCCGGCACACAA‑AC‑AGCAATTAAAAGGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑CCTG‑CGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATacac < 1:964220/300‑1 (MQ=255)
ccACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATCGGCTTAATCCCCCATGGCATTAGCCGCCTCACTGCCGCCGTTTTTACCGCCAGCTCCACTATCCCTTTGa > 1:419421/1‑300 (MQ=255)
cacacacgaagACGAGGGTGAGACGAACGCCAAACGGCGACAGCTCATT‑GCCGGCACAAAA‑ACAAGCAATTAAAATGGGGAGGCGGATAAAAATCAGCGTTGCCGATACCA‑‑CCGCCGTATGACCCAGCGGCAACGCCGGATCAAGGCCAATCAGGAACGCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGAGGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGAc < 2:517327/294‑1 (MQ=255)
aagagggggacaaggcacaccAAGATGGCCAAACGGCAGCACCGGATTACCCGTCCAAAAA‑AC‑AGCAATTACAAGGGGGAGTGGGATAAAAGTCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCCGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGAc < 1:877309/280‑1 (MQ=255)
gaagCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTCGCGATGGGCGTTA‑AACCATCCATGCTGGGTTTAATCCCCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCCATCCCCCTTTTCCATCGTaa > 2:12830/1‑301 (MQ=255)
gCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCATTagc < 1:829679/244‑1 (MQ=255)
gCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCATTagc > 2:829653/1‑244 (MQ=255)
cGATGGTGGCAAAACCCCCAAACTGCAGCACCTGATCACCCGGCACACAA‑AC‑AGCAATTACAATGGTGAGTGGGAGAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTCTGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCTCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCcgc < 1:1015991/301‑1 (MQ=255)
tggtggAAAGAGCGCCAAACAGTAGCACCTGATTACCCGGCACACAA‑AC‑AGCAAATAAAATGGGGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTAGGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCGGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAg < 1:666066/301‑1 (MQ=255)
cAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGAGCTGGGCTTTA‑AACCATCCATGCGGGGTTTCATCCCCCGTGGCCTTCGCAGCCTCCCTTCCCCCGTTTTTACCCCCCGCTGCAATCCACCTTTTAcctgctccttaaccacacctt > 2:877282/1‑280 (MQ=255)
aTCGCCAAACGGCAGAACCTGATTACCCGGCAAACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGa < 1:12830/299‑1 (MQ=255)
cccACACGGCAGCACCAGATCACCCTGCCCACCA‑GA‑AGTAATTCAAAAGGTGGGGAGGAGAACAATCAGGGATGCCGATGCC‑CCGC‑CCGTAAGGCCACGCAGCAACGCCGGATCGAGGCCAAGCGGGAACTACGGACAGCCGAACTGTGCCTGGAAACGACTAAGAGCCTGCTTAGCGATTGGCGTTA‑AACCATCCATGATGTGGTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCGTTGACATCGTAACCCGCGAGGATGCCGATAATc < 2:573499/300‑1 (MQ=255)
cccAAACAGAAGCAACTGAATACCCGTCCAAAAA‑AC‑ATCAATAAAAATGGTGGTGGGGAGAAAAATCAGGCGTTCCACTACCA‑‑CCGCCTGATGTCCCAGCAGCAACGCCGGAGTAAGGCCAAGCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCGTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATc < 2:948721/300‑1 (MQ=255)
aaaCGGAAGCACCTGAATACCCTGCAAAAAA‑AC‑AGCAATTAAAAGGGTGAGTGGGAGAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAAGCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACGACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGc < 1:816976/301‑1 (MQ=255)
actgcaacaCCTGATTACCCGTCA‑ACAACAC‑AGAAATGAAAGTGGGTAGTGGGATAAACATCAGGCTTGCCGCTACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGACGAACTTCGCCTGGAATCGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGccc < 1:70948/298‑1 (MQ=255)
caacttacaaCCCCGCACGCAA‑AC‑AGCAATTTAAATCGTGTGGGGGATAAAAATCAGGGGTGACGGAACCA‑‑CCGCGGGATTGCCCAGCAGTTACGCCCGATCATGGCTAAGGAGGAGCTCCTTACCGCCGAACTTCGCCTGTACCCGACTACGAGCCTGCTTAGCGATGTGCGTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTGAc < 1:1036938/228‑1 (MQ=255)
caCCTGATTACCCGGCACACAA‑CC‑AGCTATTAAAACGGTGAGTGTGATACAAATCAGTCTTTCCGACACCA‑‑CCGCCGTATGTCCCATCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTCTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAATCAACCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCTAGGATGCCGATAATCAGCCCCATcac < 1:1026915/300‑1 (MQ=255)
cacggATTAACCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGGGGGATAAAAATCAGGCTTGCCGATCCCA‑‑CCGCCGTATGCCCCAGCAGCAACGCCGGATCAAGTCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCACaa < 2:291707/297‑1 (MQ=255)
ccTGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTTCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGACCTTCGCCTGTCAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTACTCACTCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCACCTGCCATCCACCTTTGACATCGTAACCCGCTATGATGCCGATAATCACccccctaccaa > 1:117725/1‑293 (MQ=255)
tGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGCTACCA‑‑CCGCCGTATGTCCCAGCAGCAAAGCCGGATCAAGGCCAATCAGGAACTCCTGACAGCCTAACTTCGCCTGTAAACAACTACGAGCCTCCTTAGCTATGGACGTTA‑ACCCATCCATCATGGGTTTAATCACCCGTTGCCTTAGCAGCATCACTTCCCCCTTTTTTACCTCCAGCTGCCATACCCCTTTGACCTCCTCCCCAGCACGGCTCCCTCTATTCAGCCCCCTCACaa‑ac > 1:869925/1‑299 (MQ=255)
tGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCACCGCCGGATCAAGGCCAATCCGGCACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTACTTAGCGATGGGCGTTA‑AACCATCCATGATGGGGTTACTCACCCGTGGCATTGGCAGCATCCATGCCGACGTTTTTACCGACAGCTGCAATAAACCTTTGAATTAGTAACCAGCAAGGATTACGATAATACACCCCAGCACaa‑aa > 1:783904/1‑300 (MQ=255)
tGATTACCCGGCACACAA‑AC‑AGCAATTAAAAGGGGGGGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGGCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTTACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCACAA‑AAc < 2:1056227/301‑1 (MQ=255)
aaTTAACCGTCACACAA‑CC‑AGCAATTAAAATGGTGAGTGTCATAAAAATCAGCCTTGCCGCGAC‑‑CCCCGCCGTATGTCCTAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCTTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCACAA‑AAcc < 1:463980/300‑1 (MQ=255)
ggCACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCTCCGTTTTTCCCGCCCCCTGCATTCCCCCTTTTACATCGTACCCCCCGATGATGCCGCAAACCGCCCCCAT‑ACAACACCCCACGGtaa > 2:389271/1‑299 (MQ=255)
gCAAACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATacac < 1:1042523/240‑1 (MQ=255)
acaA‑AC‑AGCAATTAAAATGGGGAGGGGGATAAAAATCATGCTGCCCCATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCACAA‑AACCCACGGTGACAGGc < 1:447574/301‑1 (MQ=255)
caA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCCGCTGCAATACACCTTTGAc > 2:455497/1‑242 (MQ=255)
cccaaacggaaggaaaaTGGTTAGTGGGACAAAAAAGAGGCTGGGCGAT‑‑GACCACGCCGGATGTCCCAGCAGCAACGCCTGATCAAGGCCAAGCCGGAACTCCTGACCGGCGAAATTCGCCTGTAAACGACGACGGGCGTGCTGAGCGATGGGCGGTA‑AGCCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCACAA‑AACCCACGGTGACAGGc < 2:523114/288‑1 (MQ=255)
c‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCCGCATCCCTGCCGCCGTTTTTACCGCCAGCTGCAATACAACTTTGCCATCGTAACCCGCCAGGATGCCGTTACTCAGCCCCATCCCAC‑AAACCACGCTTCCAGGCCCGc > 2:947717/1‑300 (MQ=255)
catcaatgtacagtgggAGCGGGATAAAAACCAGGCGTGCCGATACAA‑‑CCGCCGTATTGCCCAGAAGCAACGCCTGATCAATGCCAATCAGGATCGCCTGCCCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCTATGTGCGTTA‑AACCATCCATGAAGGGTTTAATCACCCGTGGCATTAGCATCATCACTGCCGCCGTTTGTACTGCCAGCTTCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCACAA‑AACCCACGGTGa < 1:77861/275‑1 (MQ=255)
cAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTC‑AACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAAAACACCTTTGACCTCGTAACCCGCCACGCTTCCGAAAATCAGCCCCCTCCCAA‑AAccccacgtgcccagctcgcccaa > 1:178127/1‑281 (MQ=255)
cAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑CACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCACTACACCTTTGACCTCGTAACCCGCCAGGCTGCCGATAATCACCCCCCTCACAA‑AACCCCCGGTGACCGGCCCCCCaca > 2:352905/1‑299 (MQ=255)
aaTTAAAATGGTGAGTGGGATAAAACTCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCCTAACCCGCGAGGCTGCCGCTAATCAGCCCCATCCCAA‑CACCCACGTTGACAGGCCCGCCAAAt > 2:335428/1‑301 (MQ=255)
aTTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑CACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATCCACCTTTGACATCGTAACCCGCGAGGATGCCGATACTCACCCCCCTCCCAC‑ACCCCCCGGTAACCGGCCCGCCCAATg > 2:1093053/1‑301 (MQ=255)
ttAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AAc > 1:578163/1‑150 (MQ=255)
ttAAAATGGTGAGTGGGATAAAAATCAGGCTGGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AAc < 2:578151/150‑1 (MQ=255)
aaaaTGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATACTCAGCCCCATCACAA‑AACCCACGGTGACAGGCTCGCCCAATGGa > 1:53668/1‑300 (MQ=255)
aaaTGGTGAGTGGGATAAAAACCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGACGCAACGCCGTATCAAGGCCAATCCGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCAGCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCACAA‑AACCCACGGTGACAGGCTCGCCAAATGGAcc < 2:419416/301‑1 (MQ=255)
aaggTGAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATAAGGAACTCCTGACCGCCGAACTTCGCATGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGAATCACTGCCGCCGTTTTTACCGCCAGCTGCACTac > 1:933568/3‑218 (MQ=255)
gAGTGGGATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTCATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTGCCGCCAGCTGCAATACACCTTTGACATCTCAACCCGCGCGCATGCCGATCACCCCCCCCATCCCAA‑AACCCACCGTGACAGGCCCCCCAAATGGACAACAttt > 2:890318/1‑300 (MQ=255)
tgagaaaaaaaTCAGGCTTGCCGATACCACCC‑‑CCGTATTGCCCGGCACACACGCCGGGTCAAGGCCAATCAGGAACTCCTGACCGCCGAACGTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCCCTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACAGCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCACAA‑AACCCACGGTGACAGGCTCGCCAAATGGACCAAATTTgcgc < 1:1062724/295‑1 (MQ=255)
ggATAAAAATCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCCTCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCACTACACCTTTGCCa > 2:520754/1‑218 (MQ=255)
aaaaaTCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCGGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCACCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAGTCACCCGTGGCATTAGCAGCATCACTGCCGCAGTTTTTACCGCCAGCTGAAATACACCTTTGACATAGTAACCCGCGCGGATGCCGATAATCAGCCCAATCCCCA‑AACCCACGGTGACAGGcacttcacacggacccagatttagatgcaaa > 1:851327/1‑271 (MQ=255)
aaaaTCAGGCTTGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTCACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCCAAA‑AACCCACGGTGACAGGCTCGCCAAAGGGACCAAATTTgcgatacata > 1:875862/1‑293 (MQ=255)
tGCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGa < 2:147382/107‑1 (MQ=255)
gCCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTTCCGCCGATTTTACCGCCAGCTGCAATACACCATTGACATCGTAACCCGCGAGGATGCCGATAATCAGCACCATTCCAA‑AGCCCACGGTGACAGGCTCGCCAAATTGACCAAATTTGCGCTGAATCTCGTCGGCGCTaa > 1:278539/1‑301 (MQ=255)
cccGCCGTATGTCCCAGCAGCAACGGCGGACTAAGGCCAATCAGGAAGTACCGACCGCCGAACGTCGCACGCAAACTACTACGAGCCTTCTGAGAGATGAGCGTTA‑AACCATCCATGAGGGGTGTAAGCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTGGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCACAA‑AACCCACGGTGACAGGCTCGCCAAATGGACCAAATTTGCGCTGAATATCGTCGGCGCTAAATTTAATTc < 2:135544/301‑1 (MQ=255)
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GGTAATGGGAGAACCGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAA‑AC‑AGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATACCACCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTA‑AACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCACAA‑AACCCACGGTGACAGGCTCGCCAAATGGACCAAATTTGCGCTGAATATCGTCGGCGCTAAATTTAATTC > NC_000913/2173062‑2173662
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
|---|
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |
GATK/CNVnator alignment
N/A