Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F9 I0 R1 113 83.2 1840812 91.6% 1686183 224.4

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,916,431 T→G 11.3% H315P (CAC→CCC)  atpD ← F1 sector of membrane‑bound ATP synthase, beta subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,916,4310TG11.3% 234.2 / 2.3 109H315P (CAC→CCC) atpDF1 sector of membrane‑bound ATP synthase, beta subunit
Reads supporting (aligned to +/- strand):  ref base T (34/54);  new base G (15/3);  total (52/57)
Fisher's exact test for biased strand distribution p-value = 6.11e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 109 total aligned reads displayed.

CACGCGCTACCACCAGTTTGTCTTCTTCAGACAGTTCATCCATACCCAGGATGGCGATGATGTCTTTCAG‑TTCCTGATAACGTTGCAGGATGGACTGAACGCCACGCGCGGTGTCGTAGTGTTCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAACCTACCGCTGAAGGCATACGGCCCAGCAGTGCGGATACTTCCGTACCGGCCAGGGTGTAACGATAGATGTTGTCAACGAACAGCAG  >  NC_000913/3916195‑3916660
                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                         
cccggcgtACCCCCAGTTTGTCTTCCTCAGACAGTTCATCCATACCCAGGATGGCGATGATGTCTTTCAG‑TTCCTGATAACGTTGCAGGATGGACTGAACGCCACGCGCGGTGTCGTAGTGTTCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTg                                                                                                                                                                                                                                          <  1:179659/231‑1 (MQ=255)
cACGCGCTACCACCAGTTTGTCTTCTTCAGACAGTTCATCCATACCCAGGATGGCGATGATGTCTTTCAG‑TTCCTGATAACGTTGCAGGATGGACTGAACGCCACGCGCGGTGTCGTAGTGTTCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGGgc                                                                                                                                                                                                                                         >  1:668163/1‑239 (MQ=255)
cACGCGCTACCACCAGTTTGTCTTCTTCAGACAGTTCATCCATACCCAGGATGGCGATGATGTCTTTCAG‑TTCCTGATAACGTTGCAGGATGGACTGAACGCCACGCGCGGTGTCGTAGTGTTCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGGAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGGgc                                                                                                                                                                                                                                         >  1:917936/1‑239 (MQ=255)
  cgcgCTACCACCAGTTTGTCTTCTTCAGACAGTTCATCCATACCCAGGATGGCGATGATGTCTTTCAG‑TTCCTGATAACGTTGCAGGATGGACTGAACGCCACGCGCGGTGTCGTAGTGTTCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGCCGGGTCAGTACCCCGGTTGCGTCAAGGGgcgc                                                                                                                                                                                                                                       >  1:499765/1‑239 (MQ=255)
  cgcgCTACCACCAGTTTGTCTTCTTCAGACAGTTCATCCATACCCAGGATGGCGATGATGTCTTTCAG‑TTCCTGATAACGTTGCAGGATGGACTGAACGCCACGCGCGGTGTCGTAGTGTTCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTgcgc                                                                                                                                                                                                                                       >  1:877041/1‑239 (MQ=255)
   gcgcTACCACCAGTTTGTCTTCTTCAGACAGTTCATCCATACCCAGGATGGCGATGATGTCTTTCAG‑TTCCTGATAACGTTGCAGGATGGACTGAACGCCACGCGCGGTGTCGTAGTGTTCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTCGATACCCAGCGACGCGATCTGACGGCTCAGTACCACGGTTTCGGCAAGGTGCGCa                                                                                                                                                                                                                                      >  1:885798/1‑239 (MQ=255)
          ccccaGTTTGTCTTCTTCAAACAGTTCATCCATACCCAGGGTTGCGATTATGGCTTTCAG‑TTCCTGATATCGTTGCAGGATGGACTGAACGCCACGCGCGGTGTCGTAGTGTTCCTGACCATCCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAggtgg                                                                                                                                                                                                                               <  2:205872/237‑1 (MQ=255)
               gTTTGTCTTCTTCAGCCAGTTCATCCATACCCAGGATGGCGATGATGTCTTTCAG‑TTCCTGATAACGTTGCAGGATGGACTGAACGCCACGCGCGGTGTCGTAGTGTTCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGCGGAGTCCAGCGGGTCAACCGCCCGGTAAGTACCCAGAGACGCGCACAGCCGGGCCAGACACCCGGTTGCGTCACGGGAGGCAAAGGGGGGTGcg                                                                                                                                                                                                                          >  2:414140/1‑238 (MQ=255)
                         ttcAGACAGTTCATCCATACCCAGGATGGCGATGATGTCTTTCAG‑TTCCTGATAACGTTGCAGGATGGACTGAACGCCACGCGCGGTGTCGTAGTGTTCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGGGCGCAAAGGGGGGTGCCGGAGAC‑ggg                                                                                                                                                                                                                >  1:870658/1‑238 (MQ=255)
                                  ttCATCCATACCCAGGATGGCGATGATGTCTTTCAG‑TTCCTGATAACGTTGCAGGATGGACTGAACGCCACGCGCGGTGTCGTCGTGTTCCTGACCAACCACCAGCGGGTCCAGCGGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGTGAGATACACAAGGCCGCGACTTGACGGCTCCGTACCAACGGAGCGTCCAGAGGCGCAACgggggtgtcggggaagggggaagcacacg                                                                                                                                                                                                       >  2:31220/1‑216 (MQ=255)
                                  ttCATCCATACCCAGGATGGCGATGATGTCTTTCAG‑TTCCTGATAACGTTGCAGGATGGACTGAACGCCACGCGCGGTGTCGTAGTGTTCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGGGGGCAAAGGTGGGTGCCGGAGAC‑GGGCCgggcaag                                                                                                                                                                                                       >  1:200903/1‑238 (MQ=255)
                                   cagtcccatcccTGGATGGTGATGGTGTCTTTCAG‑TTCCTGATAACTGTGCAGGATGGACTGAACGCCACGCGCGGTGTCGTAGTGTTCCTGACCAACCGCCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGGCagtcaagtc                                                                                                                                                                                                     <  2:238717/230‑1 (MQ=255)
                                          ttcccAGGTTGGCGTTGATGTTGTTCAG‑TTCCGGATAACGTTGCAGGATGGACTGAACGCCACGGGCGGTGTCGTAGTGTTCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCa                                                                                                                                                                                              <  2:572455/237‑1 (MQ=255)
                                          tccccggtgttgCGATGGTGTTTTTTAG‑TTCCTGTGATCGTGGGGGGGTGGACTGAACGCCACGCGTGGGGTGGTGGTGTTCCTGACCAACCTCCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCCGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCGGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCa                                                                                                                                                                                              <  2:486721/228‑1 (MQ=255)
                                          tcccccggtgtgggattgtgTCTTTACG‑TGCCGGATAACGGTGGAGGATGGACGGACCGCCCCGCGCGGTGGCGTAGTGTTCCTGGCCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCa                                                                                                                                                                                              <  2:499765/221‑1 (MQ=255)
                                          tACCCAGGATGGGGATGATGTCTTTCAG‑TGCCTGATAACGTTGCAGGATGGGCTGAACGCCAGGCGCGGTGTCGTAGTGTTCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCa                                                                                                                                                                                              <  1:618016/239‑1 (MQ=255)
                                          agcccAGGATGGCGATGATGTCTTTCAG‑TTCCTGATAACGTTGCAGGATGGACTGAACGCCACGCGCGGTGTCGTAGTGTTCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCa                                                                                                                                                                                              <  1:133083/237‑1 (MQ=255)
                                            ccctggggggCGCTTATGTTTTTCAG‑GTCCTGATAACGTTGCAGGATGGACGGAACGCCACGCGGGGGGTCGTAGTGTTCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAgg                                                                                                                                                                                            <  2:200903/231‑1 (MQ=255)
                                            cccAGGATGGCGATGATGTCTTTCAG‑TTCCTGATAACGTTGCAGGATGGACTGAACGCCACGCGCGGTGTCGTAGTGTTCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAgg                                                                                                                                                                                            <  1:78133/239‑1 (MQ=255)
                                            cccAGGATGGCGATGATGTCTTTCAG‑TTCCTGATAACGTTGCAGGATGGACTGAACGCCACGCGCGGTGTCGTAGTGTTCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGACCTGACGGCCCAGGACCACCGTTGGGGCAAGGTGGGCAAAAGGGGTGGCCGGGGAC‑GGGTCAGTCAAGTAATCCGCAgg                                                                                                                                                                                            >  2:388282/1‑239 (MQ=255)
                                            cccAGGATGGCGATGATGTCTTTCAG‑TTCCTGATAACGTTGCAGGATGGACTGAACGCCACGCGCGGTGTCGTAGTGTTCCTGACCAACCACCAGCGGGTCCAGCTGAAGGCTGGTGGAGTCCAGGGGGTCAACGACCGGGAGGATACCCCAAGACGGGCTCTCACGGCCCAGAACCACGGGTCCGGCAGGGTGCGAAAAGGCGGTTGCCGAGGAC‑GGGACagacaagaacaccccggg                                                                                                                                                                                            >  2:319296/1‑228 (MQ=255)
                                            cccAGGATGGCGATGATGTCTTTCAG‑TTCCTGATAACGTTGCAGGATGGACTGAACGCCACGCGCGGTGTCGTAGTGTTCATGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCCGGTACATCCCCAAAGACGCCGACTGACGGCCCAGTACCACGGTTGCGTCAAGGAGCGCAAGAGGGGTTGCCGGCGAA‑CGgtcagggaaggaacccgccgg                                                                                                                                                                                            >  2:661123/1‑223 (MQ=255)
                                              cAGGATGGCGATGATGTCTTTCAG‑TTCCTGATAACGTTGCAGGATGGACTGAACGCCACGCGCGGTGTCGTAGTGTTCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTa                                                                                                                                                                                          <  1:388282/239‑1 (MQ=255)
                                               aGGATGGCGATGATGTCTTTCAG‑TTCCTGATAACGTTGCAGGATGGACTGAACGCCACGCGCGGTGTCGTAGTGTTCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGGGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGCCGGCTCAGCACCCCGGGTGGGTCCAGGAGGGCCAAGGGGGTTGCCGGAAAC‑GGGGCAGGCAAAGCATCCGCCGGGAc                                                                                                                                                                                         >  2:407942/1‑239 (MQ=255)
                                                 gATGGCGATGATGTCTTTCAG‑TTCCTGATAACGTTGCAGGATGGACTGAACGCCACGCGCGGTGTCGTAGTGTTCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGGGCAAAAGTGGTTGCCGGAGAC‑GGGGCAGCCAAGGCATcccccggacct                                                                                                                                                                                        >  1:238717/1‑229 (MQ=255)
                                                     gCGATGATGTCTTTCAG‑TTCCTGATAACGTTGCAGGATGGACTGAACGCCACGCGCGGTGTCGTAGTGTTCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGGGCGCAAAGGGGGTTGCCGGGGAC‑GGGTCAGCCAAGTCATCCGCAGGTACggaa                                                                                                                                                                                     >  1:213168/1‑234 (MQ=255)
                                                      ggtttatgTCTTTCTG‑TTCCTGATAACGTTGCAGGATGGACTGAACGCCCCGCGCGGTGTCGTAGTGTCCCTGACCAACCCCCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATAc                                                                                                                                                                                   <  2:877041/233‑1 (MQ=255)
                                                      cggtgatgTC‑TTCAGATTCCTGAAAACGTTGCAGGAGGGACTGAACGCCACGCGCGGTGTCGTAGTGTTCCTGCCCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATAc                                                                                                                                                                                   <  1:901631/235‑1 (MQ=255)
                                                         tgatgTCTTTCAG‑TTCCTGATAACGTTGCAGGATGGACTGAACGCCACGCGCGGTGTCGTAGTGTTCCTGGCCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGc                                                                                                                                                                                <  1:407942/238‑1 (MQ=255)
                                                         tgatgTCTTTCAG‑TTCCTGATAACGTTGCAGGATGGACTGAACGCCACGCGCGGTGGCGTAGGGTTCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGc                                                                                                                                                                                <  1:384031/238‑1 (MQ=255)
                                                           atgTCTTTCAG‑TTCCTGATAACGTTGCAGGATGGACTGAACGCCACGCGCGGTGTCGTAGTGTTCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGGGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGAGGCGGTCTGACGGCTCAGTACCCCGGTTGCGGCAAGGGGCGCAAAGGGGGGTGCCGGGAAG‑GGGTCGGTCAAGCCACCCCCAGGAACggaaaatggcgg                                                                                                                                                                             >  2:738750/1‑228 (MQ=255)
                                                                         ccTGATAACGTTGCAGGATGGACTGAACGCCACGCGCGGTGTCGTAGTGTTCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGGGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGACTACTGCCTGTACGGAGGTGATa                                                                                                                                                                >  1:577927/1‑239 (MQ=255)
                                                                                       agagacagcTGAACGCCACGCGCGGTGTCGTAGTGTTCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTtg‑‑gt                                                                                                                                               <  1:88914/231‑1 (MQ=255)
                                                                                            gggcTGAACGCCCCGGGCGGGGTCGTAGTGTTCCGGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAg                                                                                                                                           <  1:688200/235‑1 (MQ=255)
                                                                                              aCTGAACGCCACGCGCGGTGTCGTAGTGTTCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAg                                                                                                                                                                      >  1:130602/1‑212 (MQ=255)
                                                                                              aCTGAACGCCACGCGCGGTGTCGTAGTGTTCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGGGTTAGAAC‑CAGTTTTG‑‑GTGGAgggg                                                                                                                                        >  1:129432/1‑237 (MQ=255)
                                                                                              aCTGAACGCCACGCGCGGTGTCGTAGTGTTCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGGGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTAAACTGCCGGTACGGAGGGGATAGAAC‑CCGTTTTg‑‑ggggggggg                                                                                                                                        >  1:624542/1‑237 (MQ=255)
                                                                                                 gAACGCCACGCGCGGTGTCGTAGTGTTCCTGACCAACCACCAGCGTGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATa                                                                                                                                     <  1:286879/239‑1 (MQ=255)
                                                                                                  aaCGCCACGCGCGGTGTCGTAGTGTTCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCCGAGCCGCGATCTGACGGCCCAGTACACCGGCAGCGTCAAGGGGCGACAAGGGGGGTGCCGG‑GACAGGGGCACTCAAGGCATCCGCAGGTACGCATAGTGCCTGTACGGAGGGGATAAAAC‑CCGtttttgggggggggaaaa                                                                                                                                      >  2:902153/1‑225 (MQ=255)
                                                                                                  aaCGCCACGCGCGGTGTCGTAGTGTTCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCa                                                                                                                                                                                              <  1:538656/184‑1 (MQ=255)
                                                                                                  aaCGCCACGCGCGGTGTCGTAGTGTTCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGGACGTATACTGCCTGTACGGAGGGGATAGAAC‑CAGTTTtg‑‑gtggcagggaaac                                                                                                                                    >  1:115688/1‑230 (MQ=255)
                                                                                                   aCGCCACGCGCGGTGTCGTAGTGTTCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGGGATAGAAC‑CAGTTTtg‑‑gtgtggaggggata                                                                                                                                   >  1:123219/1‑228 (MQ=255)
                                                                                                       cACGCGCGGTGTCGTAGTGTTCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCCAAGGAGGTTGCCGGAGAC‑GGGTCCGTCAAGTCATCCGCAGGACCGTACACTGCCTGAACGGAGGGGGTTGAACACACTTTTG‑‑GGGGGGGGGaaaggtca                                                                                                                                >  2:663771/1‑232 (MQ=255)
                                                                                                          gcgcgGTGTCGTAGTGTTCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTCGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGGGGTTGCCGGAGAC‑GGGTCAGCCAAGTCATCCTCAGGGACGTATACTGCCTGACCGGAGGGGAAAGAAC‑CAACTTTG‑‑GGGGAGGGGAAAccgttctct                                                                                                                            >  2:88914/1‑231 (MQ=255)
                                                                                                                 gtcggagttgtccgtgccaacccCCAGGGGGTCCAGGTGCCGGTCGGTGGAGTCCGGCGGGTCAACGGCCGGGTAGATACCCAGGGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCTGCAGAACg                                                                                                                      <  1:414140/222‑1 (MQ=255)
                                                                                                                      aGTGTTCCTGACCAGCCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCg                                                                                                                                                                                                >  1:366039/1‑162 (MQ=255)
                                                                                                                      aGTGTTCCTGACCAGCCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCg                                                                                                                                                                                                <  2:366039/162‑1 (MQ=255)
                                                                                                                          ttCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCCCGGTTGCGTCCAGGTGCGCCAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGGGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGAAACGTTCCTGCAGAACGCCCAGctct                                                                                                             >  1:765802/1‑238 (MQ=255)
                                                                                                                          ttCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGGGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGTTAGAAC‑CAGTTTTG‑‑GTGGAGGTGTTACGTTCCTGCAGAACGCCCATccct                                                                                                             >  1:551846/1‑238 (MQ=255)
                                                                                                                            ccTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGGCGCGATCTGACGGCTCAGTACCACGGGTGCGTCAAGGGGCGCCAAGGGGGTTCCCGGAGAG‑GGGTCAGCCAAGTAACCCCCAGGTACGTTTACGGTCTGTACGGAGGGGATAGAAC‑CAACTTTG‑‑GTGGGGGAGACACGTTTCTCCCCAACCCCCATCtcctcc                                                                                                          >  2:912544/1‑239 (MQ=255)
                                                                                                                            ccTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCa                                                                                                                                                                                              <  1:671651/158‑1 (MQ=255)
                                                                                                                            ccTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCa                                                                                                                                                                                              >  2:671651/1‑158 (MQ=255)
                                                                                                                               gACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGGGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCTTCCGAACGCCCATCTCTTCCGc                                                                                                        >  1:678439/1‑238 (MQ=255)
                                                                                                                                accaaccaCCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGGATACTGCCTGTACGGAGGGGATAGAAC‑CAGTTTTG‑‑GTGGAGGGGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCa                                                                                                      >  1:264174/1‑239 (MQ=255)
                                                                                                                                    accaccAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGGGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAggg                                                                                                   >  1:45278/1‑238 (MQ=255)
                                                                                                                                     ccccccgCGGGTCCCGCTGACGGCTGGTGGAGTCCCGGGGGTCAACGGCCGGGTAGATCCCCAGAGACGCGATCTGACGGCTCAGTGCCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTc                                                                                                 <  2:870658/233‑1 (MQ=255)
                                                                                                                                     cccccaGCGGGTCCAGGGGACGGCGGGTGGGGTCCAGGGGGTCAACGGCCGGGTAGATCCCCAGGGACGCGATCTGACGGCTCAGTCCCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTc                                                                                                 <  2:624542/236‑1 (MQ=255)
                                                                                                                                            cGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCCGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGGGATAGAAC‑CAGCTTTG‑‑GTGGAGGGGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTgtt                                                                                          >  1:427445/1‑237 (MQ=255)
                                                                                                                                                tCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGGGATAGAAC‑CAGTTTTG‑‑GTGGGGGGGATACGTTCCTGCAGAACGCCCATCTCTTCCCCCCGGGGCGGCTGATAAcc                                                                                      >  2:572316/1‑239 (MQ=255)
                                                                                                                                                tCCAGCTGACGGCTGGGGGAGTCCAGCGGGTCCACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGCGCGCAAAGGTGGTTGCCGGAGAC‑GGGCCAGTCAAGTCATCCGCAGGAACGTATACTGCCTGGACGGGGGGGATAGAAC‑CAGGTTTG‑‑GTGGAGGGGATACGTTCCTGCAAAAAGCCCAACCCTTCACCCAGGGGCGGCTggaaaac                                                                                      >  2:453867/1‑233 (MQ=255)
                                                                                                                                                    gCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGGACGTATACTGCCTGTACGGAGGTGATAGAAA‑CAGTTTTG‑‑GTGGAGGGGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAACCTAc                                                                                   >  1:343205/1‑238 (MQ=255)
                                                                                                                                                              ggtggAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGGGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAACCTACCGCTGAAGGCa                                                                        <  1:280471/239‑1 (MQ=255)
                                                                                                                                                              ggtggAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAACCTACCGCTGAAGGCa                                                                        <  1:912544/239‑1 (MQ=255)
                                                                                                                                                               gtggGGTCCGGGGGGTCAACGGCCGGGTAAGTGCCCAGGAGCGGGATCTGGCGGCCCAGTACCCCGGTTGGGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAACCTACCGCTGAAGGCa                                                                        <  2:632805/238‑1 (MQ=255)
                                                                                                                                                               gggggctCCGGCGGGTCACCGGCCGGGTGAAGCCCCAGGGACGGGATCGGACGGCCAAGTACCAGGGTGGCGTCAAGGTCCGCAATGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCGGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAACCTACCGCTGAAGGCa                                                                        <  2:445345/232‑1 (MQ=255)
                                                                                                                                                               gccaggTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAACCTACCGCTGAAGGCa                                                                        <  1:155864/233‑1 (MQ=255)
                                                                                                                                                                gcgtcgggtgtgtataagaggaagggTAGATACCCAGAGGCGCGAGCGGACGGCTCAGGCCCACGGTTGGGTCAAGGTGCGGAAAGGTGGTTGCCGGAGGC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAACCTACCGCTGAAGGCATa                                                                      <  2:252343/216‑1 (MQ=255)
                                                                                                                                                                      ccAGCGGGTCAACGGCCGGGTAGATCCCCAGGGACGCGATCTGACGGCTCAGTACCACGGGTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAACCTACCGCTGAAGGCATACGGcc                                                                 <  1:738750/238‑1 (MQ=255)
                                                                                                                                                                       cggCGGGTCCACGGCCGGGTAAGTCCCCGGGGGCGCGGTCCGACGGCCCAGTACCCCGGTTGCCTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAACCTACCGCTGAAGGCATACGGCCca                                                               <  2:297843/237‑1 (MQ=255)
                                                                                                                                                                               cAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGAACGTATACTGCCTGTACGGAGGGGAAAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCTGCAGAACGCCCAACTCTTCCGCCAGGGTGGGCGGTTAACCTACCGCTGAAGGCAAACGGCCcacaaggggg                                                       >  2:750130/1‑231 (MQ=255)
                                                                                                                                                                               cAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGGCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAAAAC‑CCGTTTTG‑‑GTGGGGGTGAACCGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGCGGCCTGATAACCAACCGCTGAAGGCATACGCCCcacccgggc                                                        >  2:155864/1‑231 (MQ=255)
                                                                                                                                                                                 ccGGCCGGGTAGATACCCGGAGAAGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAACCTACCGCTGAAGGCATACGGCCCAGCAGTGCGGa                                                     <  2:885798/238‑1 (MQ=255)
                                                                                                                                                                                 agggCCGGGTGTATACCCAGGGACGGGATGTGGCGGCACAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAACCTACCGCTGAAGGCATACGGCCCAGCAGTGCGGa                                                     <  2:427445/237‑1 (MQ=255)
                                                                                                                                                                                 aCGGCCGGGTAGAAACCCATGGTCGCGGGTTGACGGGTCAGGACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAG‑GGGTCAGTCAAATCATCCGCAGGTACGTATCCTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAACCTACCGCTGAAGGCATACGGCCCAGCAGTGCGGa                                                     <  1:886623/239‑1 (MQ=255)
                                                                                                                                                                                       gggTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACGGCCTGTACGGAGGCGGTCGAAC‑CAGGTTTG‑‑GGGGAGGTGATACGTTCCTGCAGAACGCCCATCTCCTCCTCCAGGGTCGGCTGATAACCTACCCCCGAAGCCAAACGGccccgaaaggcgggcactcc                                               >  2:574174/1‑222 (MQ=255)
                                                                                                                                                                                            gATACCCAGGGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAACCTACCGCTGAAGGCATACGGCCCAGCAGTGCGGATACTTCCGTAc                                          <  1:572316/239‑1 (MQ=255)
                                                                                                                                                                                               aCCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAACCTACCGCTGAAGGCATACGGCCCAGCAGTGCGGATACTTCCGTACCg                                        >  1:649373/1‑238 (MQ=255)
                                                                                                                                                                                                cccagggacccggttctgcGGCTCCGTTCCCCGGTTGGGTCAAGGGTCGCAAAGGTGGTTGCCGGAGTC‑GGTGCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTCTG‑‑GTGGAGGTGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAACCTACCGCTGAAGGCATACGGCCCAGCAGTGCGGATACTTCCGTACCGGc                                      <  2:426132/221‑1 (MQ=255)
                                                                                                                                                                                                cccAGGGACGCGATCGGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAACCTACCGCTGAAGGCATACGGCCCAGCAGTGCGGATACTTCCGTACCGGc                                      <  1:353422/239‑1 (MQ=255)
                                                                                                                                                                                                  ccgcgcgccgATCTGACGGCTCAGTACCCCGGTTCCGGCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGGCAAGGCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTGCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAACCTACCGCTGAAGGCATACGGCCCAGCAGTGCGGATACTTCCGTACCGGCCa                                    <  2:202219/231‑1 (MQ=255)
                                                                                                                                                                                                  caggagcgggttCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAACCTACCGCTGAAGGCATACGGCCCAGCAGTGCGGATACTTCCGTACCGGCCa                                    <  1:663771/228‑1 (MQ=255)
                                                                                                                                                                                                   agagACGCGATCTGACGTCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTCTACTGACTGTACGGAGGTCATAGAAC‑CAGTTTTG‑‑GGGGAGGGGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAACCTACCGCTGAAGGACTACGGCCACGCCGTGCGGGTAATTCCGAACGGGCCAg                                   >  2:504739/1‑239 (MQ=255)
                                                                                                                                                                                                   agagACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGCTAACCTACCGCTGAAGGCATACGGCCcagca                                                            >  1:252343/1‑214 (MQ=255)
                                                                                                                                                                                                   agagACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGAGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACGTCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGAAACGTTCCTGCAGACCGCCCATCTCTTCCGCAAGTGCCGGCGGTCAAACTACCACTGCAGGCATACAGCCCAACACGCGGGAAACCTCCATACCGCCCAg                                   >  2:339769/1‑239 (MQ=255)
                                                                                                                                                                                                    ggggcggggtttGACGGCTCAGTTCCACGGTTGCGTCAAGGGGCGCAAAGGTGGGTGCCGGAGAC‑GGGTTCGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTGGTGTGGAGGTGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAACCTACCGCTGAAGGCATACGGCCCAGCAGTGCGGATACTTCCGTACCGGCCa                                    <  2:123219/228‑1 (MQ=255)
                                                                                                                                                                                                        gccgttCTGACGGCTGAGTTCCACGGTTGCGTAAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAACCTACCGCTGAAGGCATACGGCCCAGCAGTGCGGATACTTCCGTACCGGCCAGGgtgt                              <  2:551846/234‑1 (MQ=255)
                                                                                                                                                                                                        cgggATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAACCTACCGCTGAAGGCATACGGCCCAGCAGTGCGGATACTTCCGTACCGGCCAGGgtgt                              <  1:750130/236‑1 (MQ=255)
                                                                                                                                                                                                        cgcgTTCTGTCGGCTCAGTTCCGCGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCATTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAACCTACCGCTGAAGGCATACGGCCCAGCAGTGCGGATACTTCCGTACCGGCCAGGgtgt                              <  2:264174/239‑1 (MQ=255)
                                                                                                                                                                                                        cgcgATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCTGAGAC‑GGGTCAGTCAAGTCATCCGCAGGGACGAAAACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGCAGGGGTTACGTTCCTTCGTAACCCCCATCCCTTCCGCCAGGGTCGGTTGCAACACTACCGCTGAAGGCAAACGGCCCCCGCGTGGGGATACTTCCTTCCCGCGCAggggcg                              >  2:563764/1‑236 (MQ=255)
                                                                                                                                                                                                         tgtgtagtagggcgaggttccACGGTTGCGTCAAGGGGGGCAAAGGTGGTTGCCGGATGC‑GGGTCAGGTAAGTCCTCCGGAGGTACGTATCCTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAACCTACCGCTGAAGGCATACGGCCCAGCAGTGCGGATACTTCCGTACCGGCCAGGgtgt                              <  2:514973/219‑1 (MQ=255)
                                                                                                                                                                                                         ggggtttggcgggtaaggcccACGGGGGCGGCAAGGTGCGCAAAGGTGGTTGCCGGAGCC‑GGGGCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GGGGAGGGGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAGCCTACCGCTGAAGGCATACGGCCCAGCAGTGCGGATACTTCCGTACCGGCCAGGgtgt                              <  2:678439/219‑1 (MQ=255)
                                                                                                                                                                                                         gcgAGCGGACGGTTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAACCTACCGCTGAAGGCATACGGCCCAGCAGTGCGGATACTTCCGTACCGGCCAGGgtgt                              <  1:77374/238‑1 (MQ=255)
                                                                                                                                                                                                          cgATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAACCTACCGCTGAAGGCATACGGCCCAGCAGt                                                          >  1:613399/1‑209 (MQ=255)
                                                                                                                                                                                                          cgATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAACCTACCGCTGAAGGCATACGGCCCAGCAGt                                                          <  2:613399/209‑1 (MQ=255)
                                                                                                                                                                                                              tgtaCGGCTCAGTTCCACGGTTGCGTCAAGGTGCGCAAAGGGGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAACGTACCGCTGAAGGCATACGGCCCAGCAGTGCGGATACTTCCGTACCGGCCAGGGTGTAACGa                         <  2:129432/235‑1 (MQ=255)
                                                                                                                                                                                                                gACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAACCTACCGCTGAAGGCATACGGCCCAGCAGTGCGGATACTTCCGTACCGGCCAGGGTGTAACGATAg                      <  1:73352/239‑1 (MQ=255)
                                                                                                                                                                                                                            ccACGGTTGGCGCAAGGTGCGCAAAGGTGGTTTCCGGAGAC‑GGGTCAGTAAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAACCTACCGCTGAAGGCATACGGCCCAGCAGTGCGGATACTTCCGTACCGGCCAGGGTGTAACGATAGATGTTGTCAACg          <  1:842622/239‑1 (MQ=255)
                                                                                                                                                                                                                            ccACGGTTGCGTAAGGGTGCGCAAAGGTGGGTGCCGGAGAC‑GGGTCAGTCAAGTTAGCCGCAGGGTAGTAGACTGCCTGTACGGAGGTTATAGACC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAACCTACCGCTGAAGGCATACGGCCCAGCAGTGCGGATACTTCCGTACCGGCCAGGGTGTAACGATAGATGTTGTCAACg          <  1:504739/239‑1 (MQ=255)
                                                                                                                                                                                                                                    gCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAACCTACCGCTGAAGGCATACGGCCCAGCAGTGCGGGTACTTCCGTACCGGCCCGGGGGTAAAGATAAAAGTTGTCAGCGAAaagcag  >  2:854409/1‑239 (MQ=255)
                                                                                                                                                                                                                                    gCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAACCTACCGCTGAAGGCATACGGCCCAGCAGTGCGGATACTTCCGTACCGGCCAGGGGTTAACCATAGATGCTGTccctttaaacac   >  1:514973/1‑227 (MQ=255)
                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                         
CACGCGCTACCACCAGTTTGTCTTCTTCAGACAGTTCATCCATACCCAGGATGGCGATGATGTCTTTCAG‑TTCCTGATAACGTTGCAGGATGGACTGAACGCCACGCGCGGTGTCGTAGTGTTCCTGACCAACCACCAGCGGGTCCAGCTGACGGCTGGTGGAGTCCAGCGGGTCAACGGCCGGGTAGATACCCAGAGACGCGATCTGACGGCTCAGTACCACGGTTGCGTCAAGGTGCGCAAAGGTGGTTGCCGGAGAC‑GGGTCAGTCAAGTCATCCGCAGGTACGTATACTGCCTGTACGGAGGTGATAGAAC‑CAGTTTTG‑‑GTGGAGGTGATACGTTCCTGCAGAACGCCCATCTCTTCCGCCAGGGTCGGCTGATAACCTACCGCTGAAGGCATACGGCCCAGCAGTGCGGATACTTCCGTACCGGCCAGGGTGTAACGATAGATGTTGTCAACGAACAGCAG  >  NC_000913/3916195‑3916660

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A