Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F9 I0 R1
|
131 |
136.1 |
2723430 |
98.1% |
2671684 |
229.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,745,559 |
A→C |
17.8% |
T253P (ACA→CCA) |
yiaN → |
2,3‑diketo‑L‑gulonate TRAP transporter large permease protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,745,559 | 0 | A | C | 17.8%
| 263.6
/ 8.4
| 100 | T253P (ACA→CCA) | yiaN | 2,3‑diketo‑L‑gulonate TRAP transporter large permease protein |
| Reads supporting (aligned to +/- strand): ref base A (30/49); new base C (18/2); total (49/51) |
| Fisher's exact test for biased strand distribution p-value = 2.88e-05 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 108 total aligned reads displayed.
GGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCAACCGTTGGTCGATTCACCGCGTCTGCTGTTTATCGTCATTATGGTGGCTATCCTGATTGTCGGCATGGTCATGG > NC_000913/3745321‑3745793
|
gggCATTGCCCCTGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCca < 1:116858/239‑1 (MQ=255)
ggCATTGCCCCTGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCca < 1:1255863/238‑1 (MQ=255)
ggCATTGCCCCTGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCca < 1:401016/238‑1 (MQ=255)
ggCATTGCCCCTGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCca < 1:425284/238‑1 (MQ=255)
ggCATTGCCCCTGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCca < 1:485999/238‑1 (MQ=255)
cTGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGGTT‑CCC‑TCCGGCCGC‑TTTTTCCCCACCC‑AAT‑CCCGGGCCG‑TTGCTGCTTTCTCTGCGCTGTTTGTCCACCCC‑GTTAtttg > 1:1132372/1‑237 (MQ=255)
tGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGGGGCAGGCCAGTCGCTTTAATTTCCCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTAcc < 1:12618/239‑1 (MQ=255)
gatgatgGGCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCCGCCCG‑TTTTTCCCTACCG‑CAG‑ACGGGGGCG‑GTGCTGCTTTTTTTGCGCGGTTTTTCTCCCCC‑GGTATTTAcccgggaa > 2:548692/1‑233 (MQ=255)
tgGGCGCAACGCTGATGCTTACCGGGGGGTGGCAGGCCAGTCGCCTTAATTTCCCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑Ac < 1:131976/238‑1 (MQ=255)
gggCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGGTT‑TGC‑CCCGGCCCG‑TTTTCCCCTACCG‑AAG‑CCGGGGCCG‑CTGGTGCTTTCTATCGGCTGTTTGTCGCCCCA‑GTTATTTTCCGTGAAATG‑ACC‑t > 1:1132535/1‑239 (MQ=255)
cgcAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGGTT‑CTCTTCCGCCGTG‑TTT‑CCCCTTCCC‑AAA‑CCGGGGGCG‑TTTGTGCTTTTTATGCGCTGTTTGTTGCCCCA‑GGTTTTTTccctcgaaataccctc > 2:826180/1‑224 (MQ=255)
gcAACGCTGATGCTTCCCTGGTGGTGGCAGGCCAGCCGCTTTAATTTCCCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCg < 1:328312/238‑1 (MQ=255)
gcAACGCTGATGCTTACCTGGGGGTGGCAGGCCATTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGc < 1:177300/239‑1 (MQ=255)
gcAACGCTGATGCGTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGc < 1:843133/239‑1 (MQ=255)
cAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑TGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAC‑CCGGGGCCG‑GTGCTGCTTTCTATGCGCTGTTTGTCGCCCCA‑GATATTTACCCTGAAATG‑ACC‑TTTGc > 1:205512/1‑238 (MQ=255)
cAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGcc < 1:669070/239‑1 (MQ=255)
cAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCCG‑TTTTCCCCTACCG‑AAG‑CCCGGGCCG‑TTGCTTCTTTCTTTTCGCCGTTTGTCGCCACA‑GGTATTTTCCGTGGAATT‑ACC‑TTCGc > 1:1034279/1‑238 (MQ=255)
cAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCCGCCTT‑TTTTCCCCTCCCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTCTGCGCTGTTTTTCGCCCCA‑CTTATTTACCGTTAAATT‑AAC‑TTTGc > 1:424869/1‑238 (MQ=255)
cAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCCGCCTG‑GTTTCCCCTACCG‑AAC‑ACGGGGCCG‑CTGCTGCTTTTTATTAGCCGTTTTTTGCCACA‑GGTATTTTCCGTGAAATG‑ACC‑TTTGc > 2:958211/1‑238 (MQ=255)
cAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGGTT‑TGC‑TCCGGCCTT‑TTTTCCCCCACCG‑AAG‑CCGGGGGCG‑CTGCTGCTTTTTATTCGCTGTTTGTCGCCACA‑GCTTTTTTACGTGAAATT‑ACC‑TTCGc > 1:1173021/1‑238 (MQ=255)
tGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACt < 1:548692/238‑1 (MQ=255)
tGCTTCCCTGGTGGGGGCAGGCAAGTCGCCTTAATTTCCCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACt < 1:560496/235‑1 (MQ=255)
gCTTTCCTGGTGGGGGCAGGCCAGTCGCCTTAATTTCCCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGc < 2:1067212/239‑1 (MQ=255)
gCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTCCCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCca < 1:563728/200‑1 (MQ=255)
ttACTTGTTGGTGGCAGGCCAGTCGCCTTAATTTCCCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTGCCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAt < 1:557307/239‑1 (MQ=255)
gtggtggCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGGTT‑CCC‑GCCGGGCTG‑TTTTGCCCTCCCG‑ACGCCCGGGGCCG‑‑TGCCGCTTTTTGTTCGCAGGTTGTTGGCTCAGGTTTTTTACAG‑ACAATA‑ATC‑TTCGCCCCCCTTTGGccttga > 2:560496/1‑230 (MQ=255)
cAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGgcg < 1:1273452/238‑1 (MQ=255)
ccAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGGTT‑CTC‑TCCGGGCTG‑TTTTACCCTACCC‑CAG‑GCGGGGCCG‑CGGCTGCTTTTTATGGGCTGTTTGTCTCCACA‑GGTATTTTCCGTGAAAAGAACCTTTCGCCAC‑CTTT‑GCAA‑GTACTCATTGGGgcggc‑g > 2:243765/1‑239 (MQ=255)
tCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑TGC‑CCCGGGCCG‑GTTTCCCCTACCGCAAC‑CCGGGCCCG‑TTG‑TGCTTTCTCTTCTGTGGTTTTTGCCCCC‑GGTATTTATCGTGAAAAT‑AAC‑TTCGCCACACCTTTGCAT‑CTCTACATTGTAGCGGC‑Gaaaa > 2:382945/1‑239 (MQ=255)
cGCCTTAATTTGCCCCGCCAGCAAAAAGCAACGATGCATGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑GCC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAac < 1:1355306/239‑1 (MQ=255)
cGCCTTAATTACCCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑Gaa < 2:113629/236‑1 (MQ=255)
tttAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAaccac < 1:1353419/238‑1 (MQ=255)
tAATTTCCCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCt < 1:731793/239‑1 (MQ=255)
aaTTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTc < 1:337301/239‑1 (MQ=255)
ccccGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGt < 1:896914/239‑1 (MQ=255)
cccGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑TGC‑TCCGGCCTG‑TTTTCCCCTACCC‑AAG‑CCCGGGCCG‑GTGCTGCTTTCTTTGCGCTGTTTGTCGCCCCC‑GTTATTTACCGTTAAATT‑CTC‑CTCGCCACACTTTGTCAT‑GTACTCATTTGCGCCGC‑GGAAACCCACCCAgttgtt > 2:1167707/1‑239 (MQ=255)
ccAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGGTT‑TGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTTCTTCTTTTTATTCGCGGTTTTTTGCCCCC‑GTTATTTACCCTTGAAAG‑ACC‑TTCGCCCCACCTTGGCAT‑TTACTCCTTTGTGCGGG‑GGAAAACACCCCCGTgggttttt > 1:55000/1‑233 (MQ=255)
gAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑TGC‑TCCGGCCTG‑TTTTCCCCTACCC‑AAG‑CCGGGGCCG‑GTGCTGCTTTTTCTGCGCTGTTTTTTGCCCCA‑GTTTTTTTCCGTGAAATG‑ACC‑TTCGCCCCACTTTGGCAT‑GTACTCCTTTGCGCGGC‑GGAAAACACCCCAGTGGGTTTG‑TTTTTGGTGGGCTCGGcaccaat > 2:22653/1‑235 (MQ=255)
aTCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTc < 1:348210/239‑1 (MQ=255)
tCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCca < 1:674273/132‑1 (MQ=255)
cTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑TGC‑TCCGGCCTG‑TTTTCCCCTACCC‑AAG‑CCGGGGCCG‑GTTCTGCTTTTTTTGCGCTGTTTTTCGCCCCA‑GTTATTTACCGCGAAAAG‑ACC‑TTCGCCCCACCTTTGCAT‑GGTCTCCTTGGCGCGGC‑GAAAACCCCCTCACTGGGTATG‑GTTCTGGTGGCCTCGGCCCA‑AGttttc > 2:718369/1‑236 (MQ=255)
ggCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGcc < 1:81641/239‑1 (MQ=255)
ggCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGGTT‑TGC‑CAAGGCCTG‑TTTACCCCTACCG‑CAA‑ACGGGGGCG‑GTGCTGCTTTCTTTGTTCTTTTTATCGCCCCC‑CGTATTTACCGTGCAATT‑TCG‑TTCACCGCAGCTTAGCCA‑GTTCATCTTTGCGCGGC‑GGAAAACAACCCAGGGGGTATG‑TTTTTTGTGGcgcttacacacattttacc > 2:1208179/1‑220 (MQ=255)
cACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCt < 1:1246412/238‑1 (MQ=255)
cACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCt < 1:678853/238‑1 (MQ=255)
aCTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTgg < 1:1017291/239‑1 (MQ=255)
aCTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGGTT‑TGC‑TTCCGCCCG‑TTTTCCCCCACCG‑AAG‑CCCGGGGCG‑TTGCTTCTTTTTTTGCGCCGTTTTTCGCCCCA‑GTTTTTTTCCGTGAAAAT‑ACC‑TTCCCCCCACTTTTGCCT‑GTACTCATTGGGGCCGG‑GGAAACCCCCTCCGGGGGTTTG‑GTTTTGGGGGCCTCGGCCCACATTTTCCGctgg > 2:871141/1‑236 (MQ=255)
ttttGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑TGC‑TCCGGCCTG‑TTTTTCCCCACCC‑ACA‑CCCGGGGCG‑CTGCTCTTTTTCATCCGCAGTTTTTCACCACC‑GTTATTTCCCGTTAAATG‑CCC‑CTTCCCACACCTTGGCAT‑GTACTTCATGGCGCCGC‑GACAACACCCTCAACGGGTTTG‑TTTCTTGTGGGCCCGGCCCa‑aaactccacccgtccag > 2:648249/1‑223 (MQ=255)
ttttGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCt < 1:778415/233‑1 (MQ=255)
ttttGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGGTT‑CTC‑TCCGGCCCG‑TTTTCCCCCCCCC‑AAG‑CCCGGGGCG‑GTGCTGCTTTCTTTTCGCTGTTTTTCGCCCCA‑GTTAtttt > 2:674273/1‑131 (MQ=255)
ttttGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGGTT‑CGC‑TCCCGCCTG‑TTTTCCCCCACCG‑AAG‑CCGGGGGCG‑TTTCTGCTTTTTTTGCGCTGTTTGTCGCCACC‑GGTATTTTCCCTGAAATG‑ACC‑TTCGCCCCCCCTTTGCAT‑TTACTCATTTGCGCGGC‑GAAAACCACCCCCGTGGTTATT‑TTTTTTGTGGGCTCGGCACC‑AATTTTCGCCTGGccgg > 2:799357/1‑236 (MQ=255)
ttGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCCG‑TTTACCCCTACCG‑AAA‑CCGGGGCCC‑TTGGTGCTTTTTATGCGCCGTTTTTCGCCCCA‑GTTATTTTCCGTGAAATG‑ACC‑TTCGCCACCCTTTTGGCT‑GTACTCATTGTCGCGGC‑GAAAAACACCTCCGAGGTTTTG‑TTTCTGGTGGCCTCGGCACA‑CGTTTCCGccccgcggttt > 2:247737/1‑230 (MQ=255)
ccGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTTCCCCTACCG‑AAG‑CCGGGGGCG‑GTGCTGCTTTCTATGCGCTGTTTTTCGCCACA‑GTTATTTATCGTGAAAAG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTTGCGCGGC‑GAAAACCACCCCCGTGGGTTTG‑TTTCTGGTGGCATCGGCACA‑AGTTTTCGCCTGGCTGCTTACCAtt > 2:5612/1‑239 (MQ=255)
ccGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGGTT‑TGC‑TTCCGCCTT‑CTTTCCCCTACCA‑AAA‑GCGGGGCCG‑GTGCGGGTTTCTTTGCTCTGGTTGTCGCCACC‑GTTTTTTTCCTTGAAAAG‑AAC‑TTTGCCACCATTTTGCATAGTA‑TCATTTGGGCGGCTGAAACCCACC‑CAGTGGTTGTGCTTTTGGGTGGCGCCGGCCCA‑GATTTCCCCCGGCCTGAtacacct > 2:785461/1‑233 (MQ=255)
ggTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑TGC‑TCCCGCCCGTTTTTCCCCTCCCC‑AAC‑CCGGGG‑CG‑GTGCTGCTTTCTTTGCGCTGTTTTTTGCCCCA‑CCTTTTTTCCCTGCAATT‑ACC‑TTCTCCCCCCTTTTGCAT‑GTGCCCACTGGCCCGGC‑GCAAAACACCCCCCTGGGTTTT‑TTTCTTGTTGCCTTGCCCCC‑AGTTTTCCCCCTGCCGATTaacctc > 2:778415/1‑232 (MQ=255)
tCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGaa < 1:392589/239‑1 (MQ=255)
gcTGATTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑GCCGGCCTG‑TTTACCCCTTCCG‑CAG‑CCGGAGCCG‑TTGTTTCTTTCTATGCGCTGTTTGTCGCCCCA‑GTTATTTGCCGTGAAATG‑ACC‑TTCGCCACACTTTGGGAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTGTCCGCCTGGCTGATTACCATTGCTGAACTGCCg < 2:212907/238‑1 (MQ=255)
cTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑TCC‑TCCGGCCTG‑TTTTCCCCTACCG‑AAG‑CCCGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑‑TCCCCACACTTTTGCAT‑GTTCTCATTTGCGCGGC‑GAAAACCACCCCCGGGGTTATG‑TTTTTGGTGGGCTCGGCCCA‑AGTTTTCGCCCGGCTGGTTACCATTTCTGAACTTCCcatg > 1:908482/1‑239 (MQ=255)
tGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCgatg < 1:469558/239‑1 (MQ=255)
gTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCgatga < 1:1300488/239‑1 (MQ=255)
ttccagtattctttttGGCGGGTTTCCGC‑TCGGCCCTT‑TTTCCCCTTACCG‑‑AG‑GCGGGGCCGTTTGTTGCTTTCTATGGCTTGTTTGTCGCCCCA‑TTAATTTACCGGGAAATG‑CCC‑TTCGCC‑CCCCTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGttt < 2:813675/225‑1 (MQ=255)
tcCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCT‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGttt < 2:1096778/239‑1 (MQ=255)
tcCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGttt < 2:271290/239‑1 (MQ=255)
tcatcaTTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTTCCCCTACCG‑AAG‑CCCGGGGCG‑TTGCTGCTTTCTTTGCTCTTTTTGTCGCCCCA‑Gttttttt > 2:541982/1‑96 (MQ=255)
tcatTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTa < 1:989624/239‑1 (MQ=255)
ttattGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTg < 2:1034279/239‑1 (MQ=255)
gggTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCAACCGtt < 1:960017/239‑1 (MQ=255)
ttt‑CGC‑CCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCAACCGTTgg < 1:920625/238‑1 (MQ=255)
tt‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑CCC‑TTCGCCACGCTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCCCCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCACCCGTTGGt < 2:1132535/238‑1 (MQ=255)
cGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCAACCGTTGGTCGATTCAc < 1:1353555/239‑1 (MQ=255)
gCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCAACCGTTGGTCGATTCAcc > 1:337736/1‑238 (MQ=255)
tG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCAACCGTTGGTCGATTCACCGCGt < 1:1152874/239‑1 (MQ=255)
ttACCCCTCCCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCAACCGTTGGTCGATTCACCGCGTctg < 2:597018/239‑1 (MQ=255)
aCCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCAACCGTTGGTCGATTCACCGCGTCTGCTGTTTAt < 1:1122120/239‑1 (MQ=255)
aCCG‑AAG‑CCGGGGCAG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCGCCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCAACCGTTGGTCGATTCTCCGCGTCTGCTGTTTAt < 1:1208179/239‑1 (MQ=255)
ccG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCAACCGTTGGTCGATTCACCGCGTctgc > 2:1209999/1‑231 (MQ=255)
ccG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCAACCGTTGGTCGATTCACCGCGTCTGCTGTTTAtt > 1:1274466/1‑238 (MQ=255)
ccG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCAACCGTTGGTCGATTCACCGCGTCTGCTGTTTATc > 1:730223/1‑239 (MQ=255)
ccG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCAACCGTTGGTCGATTCACCGCGTCTGCTGTTTATc > 2:417698/1‑239 (MQ=255)
ccG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCAACCGTTGGTCGATTCACCGCGTCTGCTGTTTATc > 2:566063/1‑239 (MQ=255)
ccG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCAACCGTTGGTCGATTCACCGCGTCTGCTGTTTATc > 1:539501/1‑239 (MQ=255)
ccG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGACCCACTTTGGCAT‑GTACTCATTGGCGCGGC‑GTAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGCACTGCCGATGATGGTTTCTGATTTACTGCAACCGTTGGTCGATTAACCGCGTCTGCTGTTTATc > 1:1199316/1‑239 (MQ=255)
ccG‑AAG‑CCGGGGCCG‑TTGCGGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGCGGTTATG‑TTTCTGGTGGCCTAGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTACTGATTTACTGCAAACGTTGGTCGATTCACCGCGACTGATGTTTATc > 2:1318907/1‑239 (MQ=255)
g‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCAACCGTTGGTCGATGCACCGCGTCTGCTGTTTATCGTCAt > 1:253726/1‑239 (MQ=255)
ggggCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCAACCGTTGGTCGATTCACCGCGTCTGCTGTTTATCGTCATTAt > 2:1076383/1‑239 (MQ=255)
ggCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCAACCGTTGGTCGATTCACCGCGTCTGCTGTTTATCGTCATTAtgg > 2:541771/1‑239 (MQ=255)
ggCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCAACCGTTGGTCGATTCACCGCGTCTGCTGTTTATCGTCATTAtgg > 1:632966/1‑239 (MQ=255)
gctgctTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCAACCGTTGGTCGATTCACCGCGTCTGCTGTTTATCGTCATTATGGTGGCTa > 1:919430/1‑238 (MQ=255)
tgctTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCAACCGTTGGTCGATTCACCGCGTCTGCTGTTTATCGTCATTATGGTGGCTATcc < 1:648249/239‑1 (MQ=255)
gcTTTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCAACCGTTGGTCGATTCACCGCGTCTGCTGTTTATCGTCATTATGGTGGCTATCCTGATTGTCGGCa < 2:938246/239‑1 (MQ=255)
gcTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCAACCGTTGGTCGATTCACCGCGTCTGCTGTTTATCGTCATTATGGTGGCTATCCTGATTGTCGGCa < 1:1111712/239‑1 (MQ=255)
gcTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCAACCGTTGGTCGATTCACCGCGTCTGCTGTTTATCGTCATTATGGTGGCTATCCTGATTGTCGGCa < 2:684885/239‑1 (MQ=255)
gcTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCAACCGTTGGTCGATTCACCGCGTCTGCTGTTTATCGTCATTATGGTGGCTATCCTGATTGTCGGCa < 1:1098640/239‑1 (MQ=255)
tGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCAACCGTTGGTCGATTCACCGCGTCTGCTGTTTATCGTCATTATGGTGGCTATCCTGATTGTCGGCATg > 2:132954/1‑239 (MQ=255)
ttGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCAACCGTTGGTCGATTCACCGCGTCTGCTGTTTATCGTCATTATGGTGGCTATCCTGATTGTCGGCATGGTc < 1:634045/239‑1 (MQ=255)
ttGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCAACCGTTGGTCGATTCACCGCGTCTGCTGTTTATCGTCATTATGGTGGCTATCCTGATTGTCGGCATGGTc > 1:984188/1‑239 (MQ=255)
tGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCAACCGTTGGTCGATTCACCGCGTCTGCTGTTTATCGTCATTATGGTGGCTATCCTGATTGTCGGCATGGTCa < 1:252510/239‑1 (MQ=255)
gTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCAACCGTTGGTCGATTCACCGCGTCTGCTGTTTATCGTCATTATGGTGGCTATCCTGATTGTCGGCATGGTCAt < 1:1167707/239‑1 (MQ=255)
cGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCAACCGTTGGTCGATTCACCGCGTCTGCTGTTTATCGTCATTATGGTGGCTATCCTGATTGTCGGCATGGTCATgg > 2:737488/1‑239 (MQ=255)
cGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCAACCGTTGGTCGATTCACCGCGTCTGCTGTTTATCGTCATTATGGTGGCTATCCTGATTGTCGGCATGGTCATgg > 1:679657/1‑239 (MQ=255)
|
GGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTT‑CGC‑TCCGGCCTG‑TTTACCCCTACCG‑AAG‑CCGGGGCCG‑TTGCTGCTTTCTATGCGCTGTTTGTCGCCACA‑GTTATTTACCGTGAAATG‑ACC‑TTCGCCACACTTTGGCAT‑GTACTCATTGGCGCGGC‑GAAAACCACCTCAGTGGTTATG‑TTTCTGGTGGCCTCGGCACA‑AGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCAACCGTTGGTCGATTCACCGCGTCTGCTGTTTATCGTCATTATGGTGGCTATCCTGATTGTCGGCATGGTCATGG > NC_000913/3745321‑3745793
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
