Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A8 F17 I0 R1 115 121.7 2441348 96.4% 2353459 231.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,115,217 T→C 11.1% E121G (GAG→GGG)  glpX ← fructose 1,6‑bisphosphatase II

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,115,2170TC11.1% 275.6 / 3.3 117E121G (GAG→GGG) glpXfructose 1,6‑bisphosphatase II
Reads supporting (aligned to +/- strand):  ref base T (53/48);  new base C (2/13);  total (55/62)
Fisher's exact test for biased strand distribution p-value = 5.08e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 119 total aligned reads displayed.

TGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGT‑GGCG‑TGGTTTAGCCAGAATCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCGACTTTTTCACCAATGTAGAGCATCGGTGCTTCGTCGATTTCACCTTCACCAATGACGATGGTGCCGTCAATGTTGACCTGGTTGAGCATAA  >  NC_000913/4114981‑4115454
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                             
tGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGT‑GGCG‑TGGTTTAGCCAGAATCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTcc                                                                                                                                                                                                                                             <  2:333247/239‑1 (MQ=255)
tGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGT‑GGCG‑TGGTTTAGCCAGAATCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCCTTGGCTCCCGGCCCGTCCATCAGCTtctc                                                                                                                                                                                                                                              >  2:87442/1‑238 (MQ=255)
  tgcggCATCAAGGTGCGATTTGAGGCCGCATCGTCTCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCAGTTCAGCGATAACGGCATCGT‑GGTG‑TGGTTTTGTCAGAATCGTTACCGTCAGTTCGCCCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCa                                                                                                                                                                                                                                            <  2:89052/235‑1 (MQ=255)
       cATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGT‑GGCG‑TGGTTTAGCCAGAATCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACa                                                                                                                                                                                                                                      >  1:103405/1‑239 (MQ=255)
            aGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGT‑GGCG‑TGGTTTAGCCAGAATCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGCTCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATcc                                                                                                                                                                                                                                 >  1:1049372/1‑239 (MQ=255)
            aGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGT‑GGCG‑TGGTTTAGCCAGAATCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGGTCAGATCAACGGCGCCCTTGGGCCCCGGCCCGACAATCAGCTTCCCCATCTACATATcc                                                                                                                                                                                                                                 >  2:484445/1‑239 (MQ=255)
            aGGTGAGAATTGAGGCCGAAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGT‑GGCG‑TGGTTTAGCCAGAATCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGGTCCGATCAATGGTGCCTTTGGCCCCCCGCCCCACAATCAGCTTCTCCCTATACAtctc                                                                                                                                                                                                                                  >  2:22987/1‑238 (MQ=255)
              gTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGT‑GGCG‑TGGTTTAGCCAGAATCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAT‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGGTCCGATCCATGGGGCCTTTGGCTCCCGGCCCCACAATCACCTTCTCCATATACatcaccc                                                                                                                                                                                                                                >  2:1208401/1‑233 (MQ=255)
              gTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGT‑GGCG‑TGGTTTAGCCAGAATCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTCCATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGGTCAATGGGGCCTTTGGCTTCCGGCCCGACAATCAGCTTCTCCATATACATATccc                                                                                                                                                                                                                                >  1:281146/1‑237 (MQ=255)
              gTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGT‑GGCG‑TGGTTTAGCCAGAATCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGGTCAATGGCGCCTTTGGCGCCCGGCCCGACAATCAGCCTCTCCATATACATATccc                                                                                                                                                                                                                                >  2:193539/1‑237 (MQ=255)
              gTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGT‑GGCG‑TGGTTTAGCCAGAATCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCg                                                                                                                                                                                                                                >  1:149464/1‑238 (MQ=255)
                 agaATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGT‑GGCG‑TGGTTTAGCCAGAATCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGGTCCTTTGTCCCCCCGCCCCACAATCCGCTTCTCCCTAAACATATTCAgcg                                                                                                                                                                                                                             >  2:739282/1‑238 (MQ=255)
                  gaatggcgccagCAACGTCGCTGCCGAGAGTAGCAAATACGGCTACGCCGAGTTGGTGCATTTCAGCGTTGACGGCTCGGT‑GGCG‑GGGTTTAGCCTGAATCGTTTCCGTCAGTACTCTCAACGGTTTGCCAGG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGATGCAGGTTCAGATCAATGCTGCCTTTGTCTCGCGGCCCGTCAAGCAGCTTCGCCATATACATTTCCGgcga                                                                                                                                                                                                                            <  2:845926/227‑2 (MQ=255)
                  gaATTGACGCGGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGT‑GGCG‑TGGTTTAGCCAGAATCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGgcgc                                                                                                                                                                                                                            <  1:36052/238‑1 (MQ=255)
                      tGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGT‑GGCG‑TGGTTTAGCCAGAATCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCa                                                                                                                                                                                                                           >  1:59954/1‑235 (MQ=255)
                      tGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGT‑GGCG‑TGGTTTAGCCAGAATCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCa                                                                                                                                                                                                                           <  2:59954/235‑1 (MQ=255)
                      tGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGT‑GGCG‑TGGTTTAGCCAGAATCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCCTTGa                                                                                                                                                                                                                       >  1:1003651/1‑239 (MQ=255)
                        aGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGT‑GGCG‑TGGTTTAGCCAGAATCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCCATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCAtttggg                                                                                                                                                                                                                     >  1:580512/1‑235 (MQ=255)
                        aGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGT‑GGCG‑TGGTTTAGCCAGAATCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGGTCAGATCCATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAgg                                                                                                                                                                                                                     >  1:1150633/1‑239 (MQ=255)
                           ccGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGT‑GGCG‑TGGTTTAGCCAGAATCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGaa                                                                                                                                                                                                                   <  1:807127/238‑1 (MQ=255)
                            cGCACCGTCGCCGTCCGGAATGGAAAATCCGCGTACGCCGTGTTGCTGCATTTCAGCGATAACGGCACCGG‑GGCG‑GTGTTTAGCCAGCATCGTTACCGTCATTTCGCTCAACGGTTTGGCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAag                                                                                                                                                                                                                  <  2:1165117/238‑1 (MQ=255)
                             gCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGT‑GGCG‑TGGTTTAGCCAGAATCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGGTTCTCCATAGACATATCCGGCGCCTTGAGGAagaa                                                                                                                                                                                                                >  1:447570/1‑237 (MQ=255)
                                     gCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGT‑GGCG‑TGGTTTAGCCAGAATCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTAt                                                                                                                                                                                                        <  1:823695/239‑1 (MQ=255)
                                          cgggAAGAGCACATACGCGTACGCCGATTTGCTGCATTTCGGCGATAACGGCATCGG‑GGCG‑TGGTTTAGCCGGAATCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGcc                                                                                                                                                                                                    <  2:1032799/236‑1 (MQ=255)
                                          ccGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGT‑GGCG‑TGGTTTAGCCAGAATCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGcc                                                                                                                                                                                                    <  1:1157298/238‑1 (MQ=255)
                                             gAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGT‑GGCG‑TGGTTTAGCCAGAATCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCt                                                                                                                                                                                                   >  1:1172431/1‑236 (MQ=255)
                                                     aaTACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGT‑GGCG‑TGGTTTAGCCAGAATCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCa                                                                                                                                                                                         >  1:1039667/1‑238 (MQ=255)
                                                          gcgTACGCCGAGTTGCTGCATTTCAGCGATAACGGCAGCGT‑GGCG‑TGTTTTAGCCAGAATCGTTACCGGCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCa                                                                                                                                                                                   <  1:64045/239‑1 (MQ=255)
                                                               gtgaaaaagcgacagtttCAGCGATACCGCCATCGT‑GGGG‑GGGTTTAGCCGGAATCGTTCCCGCCAGTCCCCCCACCGGTTTGCCGGG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATACCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGcgcg                                                                                                                                                                              <  2:1034333/224‑1 (MQ=255)
                                                               gcccaggTTGCTGCATTCCACGAAAAAGGGCAGCGG‑GGCG‑GGGTTTGGCCAAAAAGGTACCCGTCAGTCCCCTAAAGGGTTTGCGGAG‑GGCCGCC‑GCCACATTGCGAAGGTTCTCCCCCAGCGGCAGGTTCAGAGCAATGGTGCTTTTGGCGCCGGGCCCGACAATCAGCTTCTCCATATACATACCCGGCGAATTGGGGAAGAGGCCTTTTTCGCCTACTGCCAGCTCCGCCAGcgcg                                                                                                                                                                              <  2:674957/233‑1 (MQ=255)
                                                                gCCGATTTGCTGTTTTTCGGGGA‑AAGCGCCTCGT‑GGCGTTGGTTAAGCAAGACTCGTACCCGTCGTTCCCCACACCGTTTTGCCG‑G‑GGCCGCCGGCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTAAGATCAAGGGTGCCTTGGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGt                                                                                                                                                                             <  2:1106378/239‑1 (MQ=255)
                                                                     gTTGCTGCATTTCAGCGTAAACGGCATCGT‑GGCG‑TGGTTTAGCCAGAATCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGc                                                                                                                                                                         <  1:22987/238‑1 (MQ=255)
                                                                      ttGCTGCTTTTCAGCGATACCGGCATCGT‑GGCG‑TGGTTTAGCCGAAATCGTTACCGTAAGTTCGCTCAACGTTTGGCCGGG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGcc                                                                                                                                                                        <  1:575570/238‑1 (MQ=255)
                                                                      gtgctgcATTGCGGCGATAACGGCA‑CGTGGGGG‑TGGTTGGGCAGGAATGTTTCCCGTCAGTTCGCTCAAGGGTGTGCGGGG‑CGCCGCC‑GCTACATTGCGCAGGTTATCGGCCAGCGGCGGGTTAAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCCCCATATACATATCCGGCGCTTTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGcc                                                                                                                                                                        <  2:580512/237‑1 (MQ=255)
                                                                                 cAGCGATAACGGCATCGT‑GGCG‑TGGTTTAGCCAGAATCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGGTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTTCGGAAGACGCCTTTATCGCCTCCTGCCATCACCGCCAGCGCGTTAggcatgccccactc                                                                                                                                                             >  2:158459/1‑225 (MQ=255)
                                                                                      aTAACGGCATCGT‑GGCG‑TGGTTTAGCCAGAATCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTcc                                                                                                                                                                                                                                             <  1:477101/153‑1 (MQ=255)
                                                                                      aTAACGGCATCGT‑GGCG‑TGGTTTAGCCAGAATCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTcc                                                                                                                                                                                                                                             >  2:477101/1‑153 (MQ=255)
                                                                                      aTAACGGCATCGT‑GGCG‑TGGTTTAGCCAGAATCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCCTCGACGTCa                                                                                                                                                        >  1:756466/1‑238 (MQ=255)
                                                                                         aCGGCATCGT‑GGCG‑TGGTTTAGCCAGAATCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGc                                                                                                                                                                    >  1:1034333/1‑223 (MQ=255)
                                                                                           ggCATCGT‑GGCG‑TGGTTTAGCCAGAATCGTTACCGTCAGTTCGCTCAACGTTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGcgcg                                                                                                                                                  <  1:32091/239‑1 (MQ=255)
                                                                                            gCATCGT‑GTGG‑TGGTTTGGCCACAATGTTTTCGGTCGGTTCGCCCACCGGTTGGCCGAG‑CGCCGCG‑GCGTCATTGCGCAGTTTATCCGCCAGCGGAGGGTTCAGCTCAATGGTGCCTTTGGTTCCCGGCCCGACAATCAGCTTCCCCATATACATATCCGGCGCATGGAGGAACCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGcgcg                                                                                                                                                  <  2:103405/238‑1 (MQ=255)
                                                                                                  t‑ggcg‑tggTTTAGCCAGAATCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCACTGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCCGGCCCCTCGCCGTCATGCCCGTGCCTTc                                                                                                                                           >  1:165078/1‑239 (MQ=255)
                                                                                                  t‑ggcg‑tggTTTAGCCAGAATCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCCACAATCCGCTTCTCCATATACATATCCCGCGCCTTGAGGAAGCCGCCTTTATCGCCTACTGCCAGCACCGCCCGCGCGTTAGCCTGGCCCCTCGCCGTCACGCGCGTGCCtt                                                                                                                                            >  2:32091/1‑238 (MQ=255)
                                                                                                      ggtgtgtgtAGCGAGAGCCGTTCCCGGCGGTGCGCCCAACGGTTGGCCGAG‑CCCCGCC‑GCTACATTCCGCAGGTTCTCCGCCAGCGGCAGGTTCAGATAAAGGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATGGAGAAAGCACCCTTTATCGCCTACGGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCa                                                                                                                                          <  2:1039667/230‑1 (MQ=255)
                                                                                                               aGCCAGAATCGTTCCCGTCAGTTCGCTCAACGTTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCaa                                                                                                                                <  1:881130/239‑1 (MQ=255)
                                                                                                                  gacatgtggtacccctcgtgcGCTCAGCGTTTCGCCGAG‑GCCCGCC‑GGTAAATGGCGCAGGTTACCCGCCGGCGGGAGGTTCAGATCAACGGTGCCTTTGGCTCCGGGCCCGCAAATCAGCTTCTCCATCGACATATCCGGCGGATTGAGGAAGCAGCCTTTATCGCCGACGGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCaa                                                                                                                                <  2:651900/216‑1 (MQ=255)
                                                                                                                  acgcacggtacccgacggtgcGCCCAACGTTTTCCCGGG‑CGCCGCC‑GCTACGTTGCGCATGTTATCCCCCACCGGCAGGTTCAGACCATGGGTGCCTTTGGCTCCCGGCCCGACAACCGGCTTCTCCATATCAATCCCCGGCGCATTGAGGAAGCAGCCTTTACCGCCTCCTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACa                                                                                                                              <  2:896126/218‑1 (MQ=255)
                                                                                                                     aaTCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTTGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCCTCGCCGGCATGCGCGTGCCTTCCATCGGGTCCACAGCaa                                                                                                                          >  2:455706/1‑239 (MQ=255)
                                                                                                                     aaTCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCCCCAGCGCGTTAGCCTGGCCCCTCGCCGGCAAGCGCCGGCCTTCAAACGGCTCCACAGCaa                                                                                                                          >  2:666710/1‑239 (MQ=255)
                                                                                                                     aaTCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGAACAATGGTGCCGTTGGCCCCCGGCCCGCCAATCAGCTTCTCCACATACATATCCTGCGCCTTCAGGACGCAGCCTTTATCCCCCACTGCCAGCCCCGCCACCGCGGTAGCCTGGCCCCTCCCCGCCCTACGCGCCCCCTCACTCGCCTCCACACCaa                                                                                                                          >  2:673278/1‑239 (MQ=255)
                                                                                                                     aaTCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCA‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGCTCAATGGTGCCTTTGGCTCCCGGCCCCACAATCAGCCTCTCCATATACATATCCGGGGCATTGAGGAAGCAGCCTTTATCCCCTACTCCCAGCACCGCCAGCCCGCTAGCCTTGCCCCTCGCCGTCATGCTCGTGCCCTCAATCgcgcccacact                                                                                                                            >  2:673303/1‑227 (MQ=255)
                                                                                                                      aTCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGGGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAat                                                                                                                         >  2:193461/1‑239 (MQ=255)
                                                                                                                                 gcgatcgccacaCGGTTTGCAGGGCCGCCGCT‑GCTCCAGTGCGCAGGGTATCCGCCGGCGGCAGTTCAAGACAAGTGGCTCTTTTGGCTCCGGGCCCCAAAATCAGCTTCCCCATATACAGACCCGGCGCTTGGAGGAAGCACCCTTTATCGCCTCCTGCCGGCCCCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTCCcgcg                                                                                                               <  2:1151684/228‑1 (MQ=255)
                                                                                                                                  aGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGt                                                                                                              >  1:339100/1‑238 (MQ=255)
                                                                                                                                     tcccccAACGTTTTGCCGGC‑CGCCGCC‑GCTACATTGCGCAGTTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTcgcc                                                                                                          <  1:666710/234‑1 (MQ=255)
                                                                                                                                        cTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCCTTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCCCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCAGGCCTTCAATCGGCTCAACCGCAATATCTACCGCGTCGCcgcg                                                                                                       >  1:1171476/1‑239 (MQ=255)
                                                                                                                                                tttGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGGTCAGATCCATGGTGCCTCTGGCTCCCTGCCCCACAATCAGCCTCTCCATATACATATCCCGCGCATTGAGGAACCAGCCTTTATCGCCTCCTGCCAGCACCCCCCGCCCCGTAACCCGGCCCATCGCCGTCACTGGCCTCCCTCCAATCGGCTCAACAGCACCATCCACCGCCTCTCCGCGccccgca                                                                                                >  2:600110/1‑234 (MQ=255)
                                                                                                                                                          cgccccc‑gcTACAGTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCACCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCGACttttt                                                                                      <  1:725980/239‑1 (MQ=255)
                                                                                                                                                          ccccgcc‑gcTACATTGCTCAGGTTATCCGCTAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATACCCGGCGCATTGAGGAAGCAGCTTTTATCGCCTGCTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCGACttttt                                                                                      <  1:5589/237‑1 (MQ=255)
                                                                                                                                                             cgcc‑gcTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCGACTTTTTCAc                                                                                   <  1:484445/239‑1 (MQ=255)
                                                                                                                                                             cccccgttccATTGGGCAGTTTATCCGCAGGCGTCAGGTTAAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAAGCAGCTTCTCCATATACATATCCGCCGCCGTGAGGAAGCAGCCTTTAGCGCCTACGGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCGACTTTTTCa                                                                                    <  2:167792/230‑1 (MQ=255)
                                                                                                                                                               cc‑gcTTCATGGCGCAGTTTACCCGCCACGGGCAGTTTCAGATAAATGGTGCCTGTGGCTCCGGGCCCGACAATCAGCTTCCCCATATACATACCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCGACTTTTTCACCa                                                                                 <  2:225938/239‑1 (MQ=255)
                                                                                                                                                                        ttGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAAGGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCCCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCGACTTTTTCACCAATGTagag                                                                         <  1:712625/239‑1 (MQ=255)
                                                                                                                                                                            gcAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATACCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCGACTTTTTCACCAATGTAGAGCAt                                                                      <  1:87442/238‑1 (MQ=255)
                                                                                                                                                                                gTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCGACTTTTTCACCAATGTAGAGCATCGGt                                                                  >  1:731840/1‑238 (MQ=255)
                                                                                                                                                                                     ccGCCAGCGGCAGGTTCAGATCTATGGAGCCTTTTGCGCCCGGCCCCACCATCAGCTTCTCCATATACATATCCGGCGCATTGCGGTACCAGCCTTTCTCCCCTCCTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCCTCATGCCCGCGCCTTCCCCCCGGCCAACAGCCATCTCTACCCCACCGCCCCGACGCGCACCGACTTTTTCACCacaatgaaacctccggccttcc                                                            >  2:532193/1‑218 (MQ=255)
                                                                                                                                                                                     ccGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCGACTTTTTCACCAATGTAGAGCATCGGTGCTtcg                                                            <  1:193461/239‑1 (MQ=255)
                                                                                                                                                                                          aGCGGCAGGTTCAGATCAATGGTTCCTTTGGATCCCGGCCCCACAATCAGCTTCTCCATATACATATCCCGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAACACCGCCACCGCGTTAGACTGGCCCATCGCCGCCATGAGCGTGCCTGCAACCGGATCAACAGCAACATCTACCGCGCCGCCGCGGCCACGACAGCCTTTTTCACCAATGTCGAGCATCCGTGCTtcgtcgct                                                       >  2:470681/1‑237 (MQ=255)
                                                                                                                                                                                          aGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCGACTTTTTCACCAATGTAGAGCATCGGTGCTTCGTCGAt                                                       >  2:252224/1‑239 (MQ=255)
                                                                                                                                                                                          aGCGGCAGGTTCAGATCAATGGGGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCCATATCTACCGCGTCGCCGCGACCAGTACCGACTTTTTCACCAATGTAGAGCATCGGGGCTTCGTCGAt                                                       >  1:1210831/1‑239 (MQ=255)
                                                                                                                                                                                            gggCAGGTTCGAATCAATGGCGCCTGGGGCGCCCTGCCCAACAAGCAGCTACCCCATATCCAAAGCCGGCGCTTGGAGGAAGCAGCTTTTAGCGCCTACTGCCAGCCCCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTGCAATCGGATCAACAGCAATATCTACCGCTTCGGCTCGACCAGTACCGACTTTTTCACCAATGTAGAGCATCGGTGCTTCGTCGAtg                                                      <  2:165078/237‑2 (MQ=255)
                                                                                                                                                                                             ggCAGGTTAAGATGAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCCCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCATACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCGACTTTTTCACCAATGTAGAGCATCGGTGCTTCGTCGAtt                                                      <  1:899173/237‑1 (MQ=255)
                                                                                                                                                                                                cggTTCAGACAAATGGTGCCTTTGGCGCCCGGCCCGACAATCAGCTTCCCCATATACATACCCGGCGCATTGAGGACGCAGCCTTTATCGCCTACTGCCAGCCCCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCGACTTTTTCACCAATGTAGAGCATCGGTGCTTCGTCGATttcacc                                                 <  2:716450/238‑1 (MQ=255)
                                                                                                                                                                                                  gTTCAGATCAATGGGGCCTTTTGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCCGCACCGCCAGCGCGTTAGCCTGGCCCCTCGCCGGCATGCGCGTGCCTTCAATCGGATCAACAACAATACCTCCCGCGTCGCCGCGACCAGTACCGACTTTTTCACCAATGTACAGCATCGGCGCTTCGTCTATttcaccc                                                >  2:63005/1‑237 (MQ=255)
                                                                                                                                                                                                     cagctcgtcggTGCCTTTGGCTGTCGGCCAGACACACACCTTCCCAAAATTCATATCCGGCGCATGGAGAACGCATCCTATACTGTCTCCCGCCAGCCCCGCCCGCGCGTTAGCATGGACCATCGCCGTCATGCGCGTGCCTTGAATCGGATCAACAGCGATATCTACCGCGTCGCCGCGACCAGTACCGACTTTATCACCAATGTAGAGCATCGGTGCTACGTCGATttcttcatca                                             <  2:887675/229‑8 (MQ=255)
                                                                                                                                                                                                            aTGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCg                                                                                             >  2:369383/1‑183 (MQ=255)
                                                                                                                                                                                                            aTGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCg                                                                                             <  1:369383/183‑1 (MQ=255)
                                                                                                                                                                                                             tGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGGCCCGTACCGCCTTTTTCACCAATGTAGAGCATCGGTGCTTCGTCGAATTCACCTTCCCCAATGAc                                     >  2:553282/1‑238 (MQ=255)
                                                                                                                                                                                                             tGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCGACTTTTTCACCAATGTAGAGCa                                                                       >  1:769613/1‑204 (MQ=255)
                                                                                                                                                                                                             tGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCGACTTTTTCACCAATGTAGAGCATCGGTGCTTCGTCGATTTCACCTTCTCCAATCACg                                    >  2:370443/1‑239 (MQ=255)
                                                                                                                                                                                                             tGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCGACTTTTTCACCAATGTAGAGCATCGGTGCTTCGTCGATTTCACCTTCACCAATGACg                                    >  2:962690/1‑239 (MQ=255)
                                                                                                                                                                                                             tGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCGACTTTTTCACCAATGTAGAGCATCGGGGCTTCCACGATTTCACCTTCACCAATgcac                                    >  2:1119798/1‑236 (MQ=255)
                                                                                                                                                                                                                  ccTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCGACTTTTTCACCAATGTAGAGCATCGGTGCTTCGTCGATTTCACCTTCACCAATGACGATGGt                               >  1:880800/1‑239 (MQ=255)
                                                                                                                                                                                                                   cTTGGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCGACTTTTTCACCAATGTAGAGCATCGGTGCTTCGTCGATTTCACCTTCACCAATGACGATGGt                               <  1:563418/238‑1 (MQ=255)
                                                                                                                                                                                                                     ttGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCGACTTTTTCACCAATGTAGAGCATCGGTGCTTCGTCGATTTCACCTTCACCAATGACGATGGGGcc                            >  2:853398/1‑239 (MQ=255)
                                                                                                                                                                                                                       ggCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGCTCACCAGCAATATCTACCGCGTCGCCGCGACCAGTACCGCCTTTTTCACCAATGTAGAGCATCGGTGCTTCGTCGATTTCACCTTCACCCATGACGATGGTGACg                           >  2:657111/1‑238 (MQ=255)
                                                                                                                                                                                                                       ggCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCGACTTTTTCACCAATGTAGAGCATCGGTGCTTCGTCGCTTTCACCTTCACCAATGACGATAGTGCCg                           >  2:1029722/1‑238 (MQ=255)
                                                                                                                                                                                                                       ggCTCCCGCCCCGCCAACCAGCTCCTCCATACACATATCCGCCGCATTGAGGAAGCAGCCTTTATCGCCTACGGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCGACTTTTTCACCAATGTAGAGCATCGGTGCTTCGTCGATTTCACCTTCACCAATGACGATGGTGCCGt                          <  2:1210831/239‑1 (MQ=255)
                                                                                                                                                                                                                       ggCGCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCGACTTTTTCACCAATGTAGAGCATCGGTGCTTCGTCGATTTCACCTTCACCAATGACGATGGTGCCGt                          <  2:1172431/239‑1 (MQ=255)
                                                                                                                                                                                                                           cccGGCCCGACATTCCGCTTTCCCATATACACTTCCGGCCCATTGAGGAGGCGCCTTTTACCCCCTACGGCCAGCCCCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCGACTTTTTCACCAATGTAGAGCATCGGTGCTTCGTCGATTTCACCTTCACCAATGACGATGGTGCCGTCAAt                      <  2:599934/239‑1 (MQ=255)
                                                                                                                                                                                                                              ggCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCGACTTTTTCACCAATGTAGAGCATCGGTGCTTCGTCGATTTCACCTTCACCAATGACGATGGTGCCGTCAATGtt                   >  1:813332/1‑239 (MQ=255)
                                                                                                                                                                                                                                 ccGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCCCCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCGACTTTTTCACCAATGTAGAGCATCGGTGCTTCGTCGATTTCACCTTCACCAATGACGATGGTGCCGTCAATGTTGAc                <  1:974118/239‑1 (MQ=255)
                                                                                                                                                                                                                                  cgcaaaTCAGCTCCCCCATCTACATAGCCGGCCCTTGGAGGACGCAGCCTTTATCGCCTACGCCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCGACTTTTTCACCAATGTAGAGCATCGGTGCTTCGTCGATTTCACCTTCACCAATGACGATGGTGCCGTCAATGTTGAcc               <  2:1201016/235‑1 (MQ=255)
                                                                                                                                                                                                                                  cGACAATCGGCTTCTCCATATACATAGCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCGACTTTTTCACCAATGTAGAGCATCGGTGCTTCGTCGATTTCACCTTCACCAATGACGATGGTGCCGTCAATGTTGAcc               <  1:1058498/239‑1 (MQ=255)
                                                                                                                                                                                                                                      aagcAGCTTCTCCATATACCTATCCGGCGCATTGAGGAAGCAGCCTTTAGCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCGACTTTTTCACCAATGTAGAGCATCGGTGCTTCGTCGATTTCACCTTCACCAATGACGATGGTGCCGTCAATGTTGACCTGGt           <  1:713348/236‑1 (MQ=255)
                                                                                                                                                                                                                                       aTCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCCGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCGACTTTTTCACCAATGTAGAGCATCGGTGCTTCGTCGATTTCACCTTCACCAATGACGATGGTGCCGTCAATGTTGACCTGGtt          <  1:600110/239‑1 (MQ=255)
                                                                                                                                                                                                                                       aTCAGCTCCTCCATATACATATCCGGCGCATTGAGGAAGCCGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCGACTTTTTCACCAATGTAGAGCATCGGTGCTTCGTCGATTTCTCCTTCACCAATGACGATGGTGCCGTCAATGGTGACCTGGtt          <  1:1201330/239‑1 (MQ=255)
                                                                                                                                                                                                                                          accTTCTCCATATCCATTCCCGCCGCATTTGGGAACCAGCCTTTACCGCCTCCTGCCAGCCCCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCGACTTTTTCACCAATGTAGAGCATCGGTGCTTCGTCGATTTCACCTTCACCAATGACGATGGTGCCGTCAATGTTGACCTGGTTGAg       <  2:861953/237‑1 (MQ=255)
                                                                                                                                                                                                                                           gCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCGACTTTTTCACCAATGTAGAGCATCGGTGCTTCGTCGATTTCACCTTCACCAATGACGATGGTGCCGTCAATGTTGACCTGGTTGAGc      >  1:803492/1‑239 (MQ=255)
                                                                                                                                                                                                                                               ctcCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCGACTTTTTCACCAATGTAGAGCATCGGTGCTTCGTCGATTTCACCTTCACCAATGACGATGGTGCCGTCAATGTTGACCTGGTTGAGCataa  >  1:371603/1‑239 (MQ=255)
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                             
TGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGT‑GGCG‑TGGTTTAGCCAGAATCGTTACCGTCAGTTCGCTCAACGGTTTGCCGAG‑CGCCGCC‑GCTACATTGCGCAGGTTATCCGCCAGCGGCAGGTTCAGATCAATGGTGCCTTTGGCTCCCGGCCCGACAATCAGCTTCTCCATATACATATCCGGCGCATTGAGGAAGCAGCCTTTATCGCCTACTGCCAGCACCGCCAGCGCGTTAGCCTGGCCCATCGCCGTCATGCGCGTGCCTTCAATCGGATCAACAGCAATATCTACCGCGTCGCCGCGACCAGTACCGACTTTTTCACCAATGTAGAGCATCGGTGCTTCGTCGATTTCACCTTCACCAATGACGATGGTGCCGTCAATGTTGACCTGGTTGAGCATAA  >  NC_000913/4114981‑4115454

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A