Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A7 F9 I0 R1 103 124.7 2465218 97.5% 2403587 230.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,780,895 T→G 10.9% V357G (GTG→GGG)  lldD → L‑lactate dehydrogenase, FMN‑linked

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,780,8950TG10.9% 365.6 / 2.2 128V357G (GTG→GGG) lldDL‑lactate dehydrogenase, FMN‑linked
Reads supporting (aligned to +/- strand):  ref base T (26/83);  new base G (16/2);  total (43/85)
Fisher's exact test for biased strand distribution p-value = 1.89e-07
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 129 total aligned reads displayed.

CGCCAGCTGGACGGTGTACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC  >  NC_000913/3780657‑3781127
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                           
cgccAGCTGGACGGTGTACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGt                                                                                                                                                                                                                                             <  1:275483/239‑1 (MQ=255)
    aGCTGGACGGTGTACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTTACCTGCTAAATTTGGTCGGAAAAGAGATTAAAAGGGCg                                                                                                                                                                                                                                         >  1:300866/1‑239 (MQ=255)
       tGGACGGTGTACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGa                                                                                                                                                                                                                                        <  2:101719/237‑1 (MQ=255)
       tGGACGGTGTACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGa                                                                                                                                                                                                                                        <  2:635769/237‑1 (MQ=255)
        ggACGGTGTACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGGAAGTGGCGATg                                                                                                                                                                                                                                      >  1:376862/1‑238 (MQ=255)
               gtACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGAc                                                                                                                                                                                                                             <  2:622926/239‑1 (MQ=255)
                    ctctTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGgcg                                                                                                                                                                                                                        <  2:705865/239‑1 (MQ=255)
                    ctctTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGgcg                                                                                                                                                                                                                        <  1:718144/239‑1 (MQ=255)
                        tCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGaa                                                                                                                                                                                                                    >  2:125997/1‑239 (MQ=255)
                        tCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGaa                                                                                                                                                                                                                    >  2:369547/1‑239 (MQ=255)
                        tCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGaa                                                                                                                                                                                                                    >  2:4256/1‑239 (MQ=255)
                        tCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGGGTAGCTTAACTGGTTAATCTGTTCGAAAAAGAGATGAAAGGGGCGATG‑ACGCTGGCTTGCGCGaa                                                                                                                                                                                                                    >  1:167089/1‑239 (MQ=255)
                          cGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGa                                                                                                                                                                                                                                        >  2:124141/1‑218 (MQ=255)
                          cGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGa                                                                                                                                                                                                                                        <  1:124141/218‑1 (MQ=255)
                            cccGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAAAGATGAAAGGGGCGATG‑ACGCTGACTTGCGCGAAATCg                                                                                                                                                                                                                >  2:218340/1‑239 (MQ=255)
                               gTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGGGGTGCTAACCTGCTTAAATTGGTCGCACAAGAGATGAAAGGGGGGAGG‑ACGCTGTCCGGCCCGGAAACG‑aac                                                                                                                                                                                                            >  1:375856/1‑237 (MQ=255)
                                 gCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGGGTGGCTCAACCGCTTAATCTGCTCGCAAAAAGGATGGAAGGCGCGAGG‑ACGCTGACCGGGGCGGAACGG‑ATCa                                                                                                                                                                                                           >  1:1091550/1‑238 (MQ=255)
                                       cctgcTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACAACGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGGAGCGCATCTTGTTAATGTGTTCCGAAAAGAGAATAAAGGGGCGCGG‑GAGCCGCCTGGCGCGGAAACG‑ATTAGC‑GGAAt                                                                                                                                                                                                   >  1:949287/1‑239 (MQ=255)
                                          gcTATTGCAGATGCGGTGAAAGGGGATATAGCCATTCTGGCGGATAGCGGGATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCCCAATTTGATCGAAAAAGAGATGGAAGGGGCCCTG‑ACGCTTCCTGGCGCGAAATCG‑ATAAGA‑GAAATTat                                                                                                                                                                                                >  2:449155/1‑238 (MQ=255)
                                           cTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGGGTAGGTAACCTGCTAAATCTGATCGGAAAAGAGATGAAAAGGGCGGTG‑AAGCTGGCTGGCCCGAAAACG‑ATCAAG‑GAAATTaa                                                                                                                                                                                                >  1:297589/1‑237 (MQ=255)
                                                   gATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTTCTAAATCTGATCGAAAAAGAGAAGAAAGGGGCGATT‑AGGCTGACTTGCGCGAAATCGCTTCAG‑‑GAAACTACGCAAGAttt                                                                                                                                                                                       >  1:906955/1‑238 (MQ=255)
                                                   gATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGAtt                                                                                                                                                                                        <  1:482251/238‑1 (MQ=255)
                                                     tGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGc                                                                                                                                                                                     <  2:128174/239‑1 (MQ=255)
                                                     tGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGGGTTGCTAACCTGCTAAATCTGATCGGAAAAAAGATGAAAGGGGGGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGccaaaatcg                                                                                                                                                                                      >  1:58029/1‑230 (MQ=255)
                                                      gCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTc                                                                                                                                                                                       >  2:782947/1‑236 (MQ=255)
                                                      gCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGGAGCTAACCTGCTAAATCTGGTCGGAAAAGAGATTACAGTGGGGATG‑ACGCCGGCTGGCGCGAAATAG‑AACCGC‑GAAAATACGCCAGATTc                                                                                                                                                                                       >  1:212800/1‑236 (MQ=255)
                                                        ggTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGGTGATAACCTGCTTAATCTGATTGAAAAAGAGAAGGAAATGGCGACG‑ACGCCGCCTGGCGGGAAATCG‑ATAACA‑GAAAATACACACAAATCGCTgg                                                                                                                                                                                  >  1:788688/1‑239 (MQ=255)
                                                        ggTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGGGTAGCTAACCTGCTTAATCTGATCGAAAAAGAGATGAAAGTGGGGATG‑ACGGTGGCTGGCGCGAGATCG‑ATCAGC‑GAAATTAAGCAAGATTCGCTgg                                                                                                                                                                                  >  1:1033582/1‑239 (MQ=255)
                                                           gAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGc                                                                                                                                                                               <  2:291396/239‑1 (MQ=255)
                                                                 tGATATAGCCATTCTGGCGGATAGCGGAATTCGTAGCGGGCTTGATGTCGTGCGTATGATTGCGCACGGTGCCGACCGCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAggg                                                                                                                                                                           <  1:292203/237‑1 (MQ=255)
                                                                  gATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGc                                                                                                                                                                         <  2:1090270/238‑1 (MQ=255)
                                                                  gATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGc                                                                                                                                                                         <  2:171099/238‑1 (MQ=255)
                                                                  gATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGc                                                                                                                                                                         <  2:1220095/238‑1 (MQ=255)
                                                                  gATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGc                                                                                                                                                                         <  1:823765/238‑1 (MQ=255)
                                                                  gATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGc                                                                                                                                                                         <  1:573702/238‑1 (MQ=255)
                                                                  gATATAGCCAGTCTGGCGGATAGCGGAATTCGTAACGTGTTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTTGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGc                                                                                                                                                                         <  1:1094899/238‑1 (MQ=255)
                                                                       aGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTa                                                                                                                                                                   <  2:539844/239‑1 (MQ=255)
                                                                                 gCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGGAGCTAAACTGCTAAATCTGATCGGAAAAGGGATGAAAGGGGCGATG‑ACGCTGACTGGCGCGAAATCG‑AACAGC‑GAAATTACGGAAGATTCGCTGGGGCAGGGGGTGGGTAAAGAGGTgt                                                                                                                                                          >  1:516380/1‑237 (MQ=255)
                                                                                   ggATAGCGGGATTCGTAACGGGCTTGATGTCGTGCGTATGGTTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGGGGTGCGTACCCGCTTAATCTGGTCGGAAAAGAGGAGGAAGGGGGGGTGAACGCTGCATGGCCGCAAAAGG‑ATAAGC‑AAAAATACCCAAATTTGGCGGTGGGGGGGGCGGGGTAAAGGGTTGcg                                                                                                                                                         >  1:561919/1‑237 (MQ=255)
                                                                                         cGGATTTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGc                                                                                                                                                   >  2:1199158/1‑237 (MQ=255)
                                                                                          ggAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACt                                                                                                                                                <  1:1129413/239‑1 (MQ=255)
                                                                                                   aaCGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCa                                                                                                                                        <  2:561919/238‑1 (MQ=255)
                                                                                                   aaCGGGCTTGATGCCGTGCGTATGATTGCGCGCGGTGCGTACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGGCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCa                                                                                                                                        <  1:1188401/238‑1 (MQ=255)
                                                                                                           tGATGTCGTGCGTATGATGGCGCTCGGGGCCGACACCGTACTGCGGGGTCGTGCTTTCTGGTATGCGCTGGCAACAGCGGGCCAGGCGGGGGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGaaa                                                                                                                                <  1:62176/238‑1 (MQ=255)
                                                                                                            gATGTTGTGCGTATGATTGCGCGCGGGGCCTGCGCCGTACTGCTGGGTCGTTCTTTCTGGTATGCGCTGGCAACAGCTGGTCAGGCGGGTGTAACTAACCTGCTAAATCTGAACGAAAAAGAGATGAAAGTTGCGATG‑ACGCTGACTGGCTCGAAATCG‑ATCAGC‑GAAATTACGCAAGATGCGCTGGTGCAGGGGCTGGGTAAAGAATTGCCTGCGGCACTGGCTCCCATGGCGAATgg                                                                                                                              <  1:728436/239‑1 (MQ=255)
                                                                                                               gTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGGCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCGCCCATGGCGAAAGGGa                                                                                                                            <  2:20830/238‑1 (MQ=255)
                                                                                                                 cGTGCGTATCAGTGCGCGCGGGGCCGACACCGGACTGCTGGGTCGTGCTTTCTTGTATGCGCGGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGATTGGCGCGAAATCG‑ATCAGC‑TAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATg                                                                                                                         <  1:778042/239‑1 (MQ=255)
                                                                                                                  gTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGGAGCTAACCTGCTAAATCTGGTCGAAAAAGAGATGAAAGTGGCGGTG‑ACGCTGACTGGCGCGCAATCG‑ATCCGC‑GGAAATACGCAAGATTTCCTGGGGCAGGGGCGGGGTAAAAAGGTGGCTGCGGCACTGGCCCCCCTGGGGAAAGGGGATGc                                                                                                                        >  1:980392/1‑239 (MQ=255)
                                                                                                                   tGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGGGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCCGGGGCCGGGGCTGGGGAAAGAGGTGCCTGCGGCCCCGGCTCCCCTGGCGAAAAGGGATGCg                                                                                                                       >  1:591685/1‑239 (MQ=255)
                                                                                                                         tggttGCGCTCGGTGACGACACCGTCCTGCTGGGTCGTGCTTTCATGGATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAg                                                                                                                 <  1:672381/236‑1 (MQ=255)
                                                                                                                              gcgcTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGGCTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGGTGGGGAAAGAGTTGCCTGCGGCACTGGCCCCCATGGCGGAAAGGAATGCGGGATAGTCGtt                                                                                                            >  2:362508/1‑239 (MQ=255)
                                                                                                                               cgcTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTTATCGAAAAAGAGATGAAAGGGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGGAAAGAGTTGCCTGCGGCACGGGCGCCCATGGCGAAAGGGGATGCGGCATAGTCGttt                                                                                                           >  1:147358/1‑239 (MQ=255)
                                                                                                                                gcTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTg                                                                                                          <  1:4256/239‑1 (MQ=255)
                                                                                                                                  tCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTgcg                                                                                                        <  1:470606/239‑1 (MQ=255)
                                                                                                                                  tCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTgcg                                                                                                        <  2:410934/239‑1 (MQ=255)
                                                                                                                                         cGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCt                                                                                                  <  2:585882/238‑1 (MQ=255)
                                                                                                                                         cGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCt                                                                                                  <  2:906955/238‑1 (MQ=255)
                                                                                                                                         cGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCt                                                                                                  <  1:793331/238‑1 (MQ=255)
                                                                                                                                                gTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTaa                                                                                          <  2:58029/239‑1 (MQ=255)
                                                                                                                                                gTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGGAGCTAAACTGCTAAATCTGTTCGAAAAAGAGATGAAAGAGGGGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GCAATTACGCAAGATTCGCTGGTGCGGGGGCGGGGGAAAGAGTAGCCTGCGGCCCTGGCTCCCATGGGGAAAGGGAATGCGGCGAAGTCGTTTGAGCCCCCCCCCCCtt                                                                                           >  1:826324/1‑237 (MQ=255)
                                                                                                                                                    tgctgGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCct                                                                                      <  2:108419/239‑1 (MQ=255)
                                                                                                                                                    tgctgGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCct                                                                                      <  2:167089/239‑1 (MQ=255)
                                                                                                                                                      ctgGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCt                                                                                                  >  2:1148435/1‑225 (MQ=255)
                                                                                                                                                      ctgGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCt                                                                                                  <  1:1148435/225‑1 (MQ=255)
                                                                                                                                                       tgGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCctct                                                                                    <  2:537464/238‑1 (MQ=255)
                                                                                                                                                          gTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTccc                                                                                 <  2:147358/238‑1 (MQ=255)
                                                                                                                                                           tcttGCTTTCTTGTATGCGCGTGAAAAAGCGGGCGAGGTGGGGGTAGCTAACCTGTTAAAACGGATCGAAAAAGAGAGGAAAAGGGAGATG‑ACGCGGAGTGGCGCGAAAACG‑ATAAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCt                                                                                <  1:216617/235‑1 (MQ=255)
                                                                                                                                                            cGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCTCCCTAACCCTCTCCCTc                                                                               <  2:44233/238‑1 (MQ=255)
                                                                                                                                                              tGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGaa                                                                                                                           >  2:50118/1‑192 (MQ=255)
                                                                                                                                                              tGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGaa                                                                                                                           <  1:50118/192‑1 (MQ=255)
                                                                                                                                                                cTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCt                                                                                                  <  2:849162/215‑1 (MQ=255)
                                                                                                                                                                cTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAAACTGGT‑AATCTGATCGAAAAAGAGATGAAAGTGGCGGGG‑AAGCCTACTGGCGAGAAATAG‑ATCAGCGGAAATTA‑GAAAGATTTGCTGGTGCAAGGGCTTGGGAAAGAGGTGCCTGCGGCACTGGCTCCCATGGCGGAAGGGGATGCGGCAAAGGCGTTTGCGACCCCCGCCCCCAACCCACCCCCCCCgggga                                                                         >  1:23753/1‑237 (MQ=255)
                                                                                                                                                                 tttCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGga                                                                          <  2:788688/238‑1 (MQ=255)
                                                                                                                                                                       ggttGCGGTGGGAACAGGGGGGCAAGGGGGTGGTGGCAACCCGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGa                                                                   <  2:1043456/236‑1 (MQ=255)
                                                                                                                                                                          tGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCCGGTAAATCTGGTCGAAAAAGAGATGAAAGTGGCGGTG‑ACGCTGACTGGCGCGGAATCG‑GTCAGG‑GAAATTAAGGCAGAATCGCTTGGGCAGGGGCTGGGGAAAGAGGTTGCTGCCGCCACGGCTCCCATGGGGACAGGGAATTGGGCATAGTCGGTTGCGGCCCCCCACCCCAAccccccactcttatacaaatatctc                                                                 >  1:849162/1‑216 (MQ=255)
                                                                                                                                                                             gcTGTCAACAGCGGGCCAGGCGGGTGTAGCGAACCGGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGtt                                                              <  2:397440/238‑1 (MQ=255)
                                                                                                                                                                             gcTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGtt                                                              <  1:369547/238‑1 (MQ=255)
                                                                                                                                                                             gcTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGtt                                                              <  1:1153274/238‑1 (MQ=255)
                                                                                                                                                                                  cAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGgcg                                                         <  2:826324/238‑1 (MQ=255)
                                                                                                                                                                                  cAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGgcg                                                         <  2:1033582/238‑1 (MQ=255)
                                                                                                                                                                                  cAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGgcg                                                         <  2:1101666/238‑1 (MQ=255)
                                                                                                                                                                                   accAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGGGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGgcgc                                                        <  2:445900/236‑1 (MQ=255)
                                                                                                                                                                                   aaCAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCt                                                       <  2:410117/239‑1 (MQ=255)
                                                                                                                                                                                   aaCAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCt                                                       <  1:782947/239‑1 (MQ=255)
                                                                                                                                                                                    aCAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCtg                                                      <  1:737548/239‑1 (MQ=255)
                                                                                                                                                                                         gggCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCtgta                                                    <  2:300866/236‑1 (MQ=255)
                                                                                                                                                                                           gCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCtgtatgta                                                <  2:1091550/238‑1 (MQ=255)
                                                                                                                                                                                                 cGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCt                                          <  1:122316/238‑1 (MQ=255)
                                                                                                                                                                                                  gggTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTc                                         <  2:486061/238‑1 (MQ=255)
                                                                                                                                                                                                    gtgtAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCAc                                       <  2:279320/238‑1 (MQ=255)
                                                                                                                                                                                                              ccTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCCGGGAGAGGGGACCGTTCCGCGCTGTCTGTACTCCCTCACTCTGAAACGac                            >  1:177640/1‑239 (MQ=255)
                                                                                                                                                                                                                  cTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCCCCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACACCGAAACGaacca                         >  1:1006416/1‑234 (MQ=255)
                                                                                                                                                                                                                  cTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCCCCCCCACCCTCTCCCCCAGGGCGAGGGGACCGTTCGGCGCTGTATGTACTCCCCCCCCCTGCAACGTCAcc                         >  2:55851/1‑238 (MQ=255)
                                                                                                                                                                                                                      aTCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCAct                    <  2:375856/239‑1 (MQ=255)
                                                                                                                                                                                                                           aTCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCCCCCTAACCCCCTCCCTCAGGGGGAGGGGACCGTTCGGCGCTGTTCGTACTCCCTCACTCTGAAACGGCACCCCCCTCtttt               >  1:1224075/1‑239 (MQ=255)
                                                                                                                                                                                                                                        tGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCg    <  2:516380/237‑1 (MQ=255)
                                                                                                                                                                                                                                        tGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCg    <  2:980392/237‑1 (MQ=255)
                                                                                                                                                                                                                                        tGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGcc  <  2:591685/239‑1 (MQ=255)
                                                                                                                                                                                                                                        tGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGcc  <  1:890257/239‑1 (MQ=255)
                                                                                                                                                                                                                                        tGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAAGTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGcc  <  2:949287/239‑1 (MQ=255)
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                           
CGCCAGCTGGACGGTGTACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG‑ACGCTGACTGGCGCGAAATCG‑ATCAGC‑GAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC  >  NC_000913/3780657‑3781127

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A