Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F18 I0 R1
|
274 |
115.5 |
2655328 |
86.7% |
2302169 |
226.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
1,404,865 |
A→G |
16.1% |
E42G (GAG→GGG) |
abgR → |
putative DNA‑binding transcriptional regulator of abgABT operon |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,404,865 | 0 | A | G | 16.1%
| 215.4
/ 6.1
| 94 | E42G (GAG→GGG) | abgR | putative DNA‑binding transcriptional regulator of abgABT operon |
| Reads supporting (aligned to +/- strand): ref base A (33/44); new base G (15/2); total (48/46) |
| Fisher's exact test for biased strand distribution p-value = 8.86e-04 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
ACTGATTTTTCACAGTTTTAACCGTTCATAAATTACCCTGACACAATCATCTGCATTAAAGTAGATGCCAGTTTCTTTGGTCTGATAAATAACGGTTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACAAGGGCAACTGGCAGGGCAGATTAATATCGGCATGGGGGCCAGTATTTCCCGCAGTCTGATGCCAGCTGTCATATCT‑CGTTTTCATCAG > NC_000913/1404632‑1405097
|
aCTGATTTTTCACAGTTTTAACCGTTCATAAATTACCCTGACACAATCATCTGCATTAATGTAGATGCCAGTTTCTTTGGTCTGATAAATAACGGTTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTAGGGCTTTTGTTGAAGTGGCTCTTCAAGGCAGCATTTGACGGGCGAGCCGCATGTTGAAAATTTCGCAACCCGAGCTGA‑GGTAATCTCATCAGAGGCTag > 1:843116/1‑239 (MQ=255)
tGATTTTTTACATTTGTAACCGTTCAAAATTTACCCTGACACAATCATCTGTATTAACGGAGGTGCCAGTTTCTTTGGACTGATAAATAACGGGTCTCGGCGGCGGTATGGTTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTCTAAGTGGCTTGTAAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTtgaa < 1:362649/239‑1 (MQ=255)
aTTTTTCACAGTTTTAACCGTTCATAAATTACCCTGACACAATCATCTGCATTAAAGTAGATGCCAGTTTCTTTGGTCTGATAAATAACGGTTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCCGCACTGG‑GTAAATCTATTTCGGGGCTagaaga > 2:110754/1‑239 (MQ=255)
ttttCACAGTTTTAACCGTTCATAAATTACCCTGACACAATCATCTGCATTAAAGTAGATGCCAGTTTCTTTGGTCTGATAAATAACGGTTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGGATGTTGAATATGTCGCAACCGGCACTGG‑GTAAATCTATTCAGGGGCTAGaagaag > 2:1212094/1‑239 (MQ=255)
gTTTTAACCGTTCATAAATTACCCTGACACAATCATCTGCATTAAAGTAGATGCCAGTTTCTTTGGTCTGATAAATAACGGTTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTTAATATTTAGCAACCGGCACTGG‑ATAAATCTATTCAAGAGCTCGAAGAAAGGTTAgcg > 2:1047418/1‑239 (MQ=255)
gTTCATAAATTACCCTGACACAATCATCTGCATTAAAGTAGATGCCAGTTTCTTTGGTCTGATAAATAACGGTTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCCGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCCACCGGCCCTGA‑GGAAATCTTTTTAGGGGCTAGAAGAAGGGTTAACGGCGCAAc > 2:480472/1‑237 (MQ=255)
ttCATAAATTACCCTGACACAATCATCTGCATTAAAGTAGATGCCAGTTTCTTTGGTCTGATAAATAACGGTTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGc < 2:1313437/212‑1 (MQ=255)
tCATAAATTACCCTGACACAATCATCTGCATTAAAGTAGATGCCAGTTTCTTTGGTCTGATAAATAACGGTTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCCGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GGAAATCTATTCAGGGGCCAGAAAAAGGGTTAAGGGCGCAAcccct > 2:314282/1‑235 (MQ=255)
tCATAAATTACCCTGACACAATCATCTGCATTAAAGTAGATGCCAGTTTCTTTGGTCTGATAAATAACGGTTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGGAGCATTCGCGGAGCGAGCCGGATGTTGAATATGTCGCAACCGGCACTGA‑GGAAATCTATTTAGGAGCTAGAAGAAGGGGTAGAGGCGTAACTCtt > 2:940604/1‑239 (MQ=255)
tCATAAATTACCCTGACACAATCATCTGCATTAAAGTAGATGCCAGTTTCTTTGGTCTGATAAATAACGGTTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGGCAGGGCAGCATTCGCGGAGCGAGCCGGATGTTGAATATGTCGCAACCGGCACTGA‑GTAATTCTATTCAGGGGCTAGTAGAAGGGTTAAAGGCGCAACTCtt > 2:792799/1‑239 (MQ=255)
tttcccgtacacAATCAGTCGCATTAAAGTAGATGCCAGTTTCTTTGGTCTGATAAATAACGGTTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGc < 2:243953/231‑1 (MQ=255)
tttcccTGACACAATCCACTGCATTAAAGGTGATGCCAGTTTCTTTGGTCTGATAAATAACGGTTATCGGTGGCGTAATGGCTTTTCAGGTAAAAATTCATCAAATGCGGGCTTTTGTTGAAGTGGCTCGGCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGc < 1:923346/236‑1 (MQ=255)
ttACCGTTACACAACCGTTTGATTTAAAGTAGATGCGAGTTTTTTTGGTCTGATAAATAACGGTTAGCGGTGGCGTCAGGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTGGAAGTGGCTCGGCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGc < 1:149737/239‑1 (MQ=255)
tcccTGACACAATCATCTGCATTAAAGTAGGTGCCAGTTTCTTTGGTCTGATAAATAACGGTTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCg < 2:843116/238‑1 (MQ=255)
acacAATCATCTGCATTAAAGTAGATGCCAGTTTCTTTGGTCTGATAAATAACGGTTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATTTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTCGAAGAAGGGGTAGCGGCGCAACTCTTTTTTTGCCGTAGTaa > 2:192996/1‑239 (MQ=255)
aaTCATCTGCATTTAAGTAGATGCCAGTTTCGTTGGTCTGATAAATAACGGGTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGc < 2:594474/239‑1 (MQ=255)
atcttttGCTTTAAAGTAGATCCCATTTTTTTTGGTTTGAAAAATTACGGTTATGGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCg < 1:1212094/233‑1 (MQ=255)
tcctcTGTATTAAAGTAGATGCCAGTTTCTTTGTGCTGATAAATAACGGTTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGt < 1:330898/236‑1 (MQ=255)
tcatcTGCATTAAAGTAGATGCCAGTTTCTTTGGTCTGATAAATAACGGTTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCTGGGCAGCATTCGCGGAGCGGGCCCACTGTTTAATATGTGGCAGCCGG‑ACCGACGGAACACTATTCCAGGGCTAGAGGAAGGGTTTGCGGCGCACCCCCTTTTTTGccctgggaaaagagt > 1:43419/1‑226 (MQ=255)
tcaatcgCATTAAAGTAGGTGCCAGTTTCTTTGGTCTGATAAATAACGGTTAGCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGt < 2:1310818/233‑1 (MQ=255)
caatctctttgaaattgcattccATTTTTTTTGGTTTTATAAATACCGGTTATCGGTTGCGTCAAGGCTTTTCAGGCAAAAATTCATCAAAGTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCATTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGt < 1:480472/218‑1 (MQ=255)
tcTGCATTAAAGTAGATGCCAGTTTCTTTGGTCTGATAAATAACGGTTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTGTAGGCAGCATTCGCGGAGCGAGCCGCATGTTGGATATGTCGCAACCGGCACTGA‑GTAAAACTTTTAACGGGTTAGAAGAGAGGTTGACGGCGCCAACCTTTTTTTCCCgtacaaaaagggggaa > 1:337922/1‑226 (MQ=255)
cTGCATTAAAGTAGATGCCAGTTTCTTTGGTCTGATAAATAACGGTTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTTGGGGAGAGAGCCGAAAGTTTTATATGTGGCAACCGGCCCTGG‑GTAAATCTATTTAGGAGGTTGAAAGAAGGATAGCCGCCAAACTCtttttttccccgaggaaaaggcgaagg > 1:299635/1‑218 (MQ=255)
cTGCATTAAAGTAGATGCCAGTTTCTTTGGTCTGATAAATAACGGTTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGGATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTCGACAAAGGGTTAGCGGGCCAACTCTTTTTTTGCCGCAGTAAAGGCgggcag > 2:1046899/1‑234 (MQ=255)
cTGCATTAAAGTAGATGCCAGTTTCTTTGGTCTGATAAATAACGGTTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTTGCCGGAGTAAAAGCGGGACg > 2:914238/1‑239 (MQ=255)
gCATTAAAGTAGATGCCAGTTTCTTTGGTCTGATAAATAACGGTTATCGGTGGCGTCATGGCTTTTCAGGGAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGGAGCATTCGCGGGGCGAGCCGAATGTTGGAAATGTGGCAACCGGACCTGG‑GTAAAACTATTCAGGGACTGGAAAAAGGGTTAGCGAGGCAACCCttattttccacagagaaaaacgggaagga > 1:503821/1‑216 (MQ=255)
aaGTAGATGCCAGTTTCTTTGGTCTGATAAATAACGGTTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATTTCGTAACCGGCACTTG‑GTAAATTTATTCAGGGGCTGAAAGAAGGGTTGACGGGCCAAAGCTTTTTTTCCCGCCGTAAAAGCTTGTCCTTAAc > 2:1315226/1‑236 (MQ=255)
gATGCCAGTTTCTTTGGTCTGATAAATAACGGTTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGGGCCGGATGTTGGATATGTCGCAACCGGGACTTG‑GTAAATCTATTCAGGAGCTAAAAGAAGGGTTAACGGCGCAACTCTTTTTTCGCCGTAGTAAAGGGGTGACGTTAACTGATGCCg > 2:78382/1‑239 (MQ=255)
gATGCCAGTTTCTTTGGTCTGATAAATAACGGTTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGGGCTAGAAGAAGGGTTAGCGGGGCAACCCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCg > 2:685965/1‑239 (MQ=255)
gATGCCAGTTTCTTTGGTCTGATAAATAACGGTTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCAATCGCCGCGCGAGCCGAATATTGGATATTTTGCAAACCGCCCTTA‑GGAAAACTATTCAGGGGCTCGAAGAAGGGTTAGCGGCGCCACTCTTTTTTCGCCGCAGTAAAGACGGGACGTTAAATGA‑GCCgg > 1:821125/1‑239 (MQ=255)
aTGCCAGTTTCTTTGGTCTGATAAATAACGGTTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCCTTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCCGCACTGA‑GTAAATCTCTTCAGGAGCTAAGAGAAGGGTTAACGGCGCGAACCTTTTTTTCCCGGAAAAAAAGCGGGACGGTAAcaggagacgg > 1:547527/1‑230 (MQ=255)
aTGCCAGTTTCTTTGGTCTGATAAATAACGGTTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGACGAGCGAGCCCAATTTTGAATATGTCGCAAACGGACCCGC‑GGAAATCTATTTAAGGGCTTGAAGAAGGGGTAAACAGGCCACCCTTTTTTCCCCGGAGTAAAAGTGTGAAGGTAACTggagacgg > 1:195512/1‑232 (MQ=255)
cAGTTTCTTTGGTCTGATAAATAACGGTTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATTTCGCAACCGGACCTGG‑GTAAAACTATTCAGGAGCTTGAAGAAAGGTTAAGGGCGCAAACCTTTTTTCTCCGTTGTAAAAGCGGGAGGTTAACTGGTGCCggggga > 2:1271287/1‑235 (MQ=255)
tttCTTTGGTCTGATAAATAACGGTTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGGGTGACGTTAACTGATTCCGGG‑GAAAGt > 2:500038/1‑239 (MQ=255)
tGGTCTAGTAAAGTACGGTTTTCGGTGGCGTGATGGCTTTTCGGGTAAAAATTCATCAAATGCGGGGCTTGTTTTAAGAGGCTCGCCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTAt < 1:940604/239‑1 (MQ=255)
ttaaataaCGGTTTTCTGTGGCTCCAGGGCTTTTCAGTTAAAAATTCATCAAAGTCGGGCTTTTTGTGAAGTGGGCCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACg < 1:1214052/238‑1 (MQ=255)
ataaataaCGGTTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGCATATGTCGCAACCGGCCCTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTCGTAAAGGCGTGACGTTAACTGATGCCGGG‑GACAGTTTTTTTCTGccc > 2:213908/1‑236 (MQ=255)
ataaataaCGGTTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTTAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCTCCGTAGTAAAGGGCGGACGTTAACTGTTTCCGGTGGAAAGtttttttacccc > 2:505621/1‑231 (MQ=255)
ataaataaCGGTTAGCGGTTGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGGCATGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGGAACCGGCACTGA‑GTAAATCTAGTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCTGGT‑GAAAGTTTTTATCAGCACg < 2:46489/239‑1 (MQ=255)
taaaaatggtttcgcGGGGGCGTAATGTGTTTTCGGGAAAAAAGTCATCAAATTGGGGTTTGTGGTGAAGTGGCCCGACAGGGCAGCATTGGCGGAGCGATCCGAATGTTGAATATGGCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGc < 1:1236688/225‑1 (MQ=255)
taaCGGTTGCGGGTGGGGTCGTGGCTTTTAAGGTAAAAATTCATCAAATTGGGGCTTTTTTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGGCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGt < 1:1046899/239‑1 (MQ=255)
aaCGGTTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCCTCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGGGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCCTAGTAAAGGGGTGAGGTTAACTGATGCCGGG‑GAAAGGTTTTTTCACTACGcccg > 2:227769/1‑235 (MQ=255)
aCGGTTATCGGTGGCGTCAGGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCt < 2:627867/239‑1 (MQ=255)
gTTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCTCCGTAGTAAAGGCGGGACGTTAACTGATGCCGGT‑GAAAGGTTTTTTTAGCACGCCAGGCTAAt > 2:527445/1‑239 (MQ=255)
gTTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGc < 1:970406/189‑1 (MQ=255)
gTTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGc > 2:970406/1‑189 (MQ=255)
gTTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCAATCGCGGAGCCGGCCGAATGTTGAATATGTTGCCACCGGCACTGC‑GGAAATCTATTCACGAGCTAGAAAAAAGGGTAGCGGGCCAACCCTTTTTTTTCCCTAGAAAAAGCTGGGGAGTAACTGGTGCCGGT‑GAAAGTTTTTAACAGAACgaagtgcaaaa > 1:562993/1‑229 (MQ=255)
tttgggggggtgtaTGGTTTTTCGGGTAAAAATTCATCAAATTCGGGTTTTTGTTGAAGTGGCCCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTc < 1:965402/226‑1 (MQ=255)
gcctgggtttttCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGGCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCt < 1:914238/231‑1 (MQ=255)
cATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGAAGGATTCGCGGAGCGGGCCCAATGTTGAATTTGTGGCAAACCGCACGTA‑GTAAATCTATTCTGGAGCCTACAGAAGGGTTAAAGGCGGCCCTCCTTTTTTTGCGTATTAAAAGTGTTCCGGTAAATGATGCCCGG‑GAAAGTATTTTTAAATAGGCCACTCTAATTCttaagaagtggg > 1:1128601/1‑229 (MQ=255)
ggtttttAAGGTAAAAATTCATCAAATTCGGGCTTTGTTTGAAGGGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTgcgcg < 1:685965/236‑1 (MQ=255)
ggCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTgcgcg < 2:43419/239‑1 (MQ=255)
ggCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTgcgcg < 2:736650/239‑1 (MQ=255)
ggCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGAACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGTTTAGCGGCGCAGCTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTgcgcg < 2:1197658/239‑1 (MQ=255)
ggCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGGTGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTgcgcg < 2:135467/239‑1 (MQ=255)
ttCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGGGCCGAATTTTTAATTTGTCGCCACCGGCACTTG‑GGAAAACTATTCAGGGGCTGGAAGAAGGGTTATCGGCGCAACTCTTTTTTTTCCGTGGTAAAGGGGTGTCGTTAACTGATGCCCGT‑GGAAGTTTTTATCCTAACCCCACGCAAATATTTGAAGAGcgccggcaagc > 1:353999/1‑228 (MQ=255)
gttAAAAATTCCTTAATTTCGGGTTTTTTTTTGAGTGGCTCGCCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAag < 1:644459/237‑1 (MQ=255)
gTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGTTGCCGGG‑GGAAGTTTTTATCAGCACGCCAGTCTAATTCTTTAAAAGCTGGGCGCAGCCCAaga > 2:567902/1‑239 (MQ=255)
tAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAaga < 2:821125/238‑1 (MQ=255)
tcaAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGcc < 2:1058926/239‑1 (MQ=255)
aacaaTTCGGTGGTTTGTTGACGTGGCTCGTCAGGACAGCATGCGAGGAGCAGGCCGAATGTTGAATAGGTCGCAACCGGCACTGA‑GTAAAGCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCGTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTAGCAGCACGCCAGTCTAATTCATGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGcc < 1:783474/236‑1 (MQ=255)
aTTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGG‑GAAAGTTTTTATCAGCCCCCCAGCCTAATTCTTGAAAAGCTGCGCGCAGCCCAAGAGGAATTTCGCCAAc > 2:808718/1‑238 (MQ=255)
gggCTTTTGTTGAAGGGGCTCGTCAGGGCAGCATTCGGGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACaa < 2:547527/239‑1 (MQ=255)
aGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACAAGGGCAACTggca < 2:289788/238‑1 (MQ=255)
aGTGGCTCGTCAGGGCAACATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACAAGGGCAACTggcag < 2:1211419/239‑1 (MQ=255)
gggctggcAGGGCAGATTTTGCGGGGCGAGCCGAATGTTGAATAGGTCGCAACCGGCACTGA‑GTAAATCTATCCAGGAGGTAGAATAAGGGTTATCGGCGCAACTCTTGTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGTCAACGACAAGGCCAACTgataggg < 1:656588/231‑1 (MQ=255)
gCTCGTCAGGGCAGCCTTCGCGGCGCGAGACGGATGTTGAATCTGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGCAGAAGGGTTAACGGCGCCACTCTTTTTTCGCCGTAGTAAAGGCGGGACGGTAACTGATGCCGGG‑GAAAGTTTTTTTTAATACCCCAGACTAATTCTTGGAAAGCCGCGCGCGGCCCAAAATGGGATTGGCCAAACACAAgggacacagggcgggga > 1:934912/1‑225 (MQ=255)
cGTAAGGGCAGCATTGGCGGGGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACAAGGGCAACTGGCAGGGCAGAt < 2:1086647/239‑1 (MQ=255)
gcagcaTTCGGGGAGCGAGCCGAATGGTGAATATGGCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACAAGGGCAACTGGCAGGGCAGATTAatat < 2:503821/238‑1 (MQ=255)
ttccgggAGCTAGCCTGATGTTGAATGTGTCGCAACCGGCCCTGA‑ATAAATCTATTCAGGATCTAGAAGAAGGGTTAGCGGCGAAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACAAGGGCAACTGGCAGGGCAGATTAATATCGGCATg < 1:1074743/234‑1 (MQ=255)
gcgGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAAAGCTGCGCGCAGCCCAAGAGAATATTCGCCAACGCCAAGGGAAACCGGCAGGGAAAGTTAAAACCGGCATgggg > 1:262349/1‑239 (MQ=255)
ggtacgagcggtgtGTTGAATAGGTCGGAAGCGGCATTGA‑GAAAATTTGTTCAGGGGGTAGAAGAAGGGTTCGGGGGCGAACGGTTTTTTCGCCGTAGTAAAGGCGGTAGTGTAACGGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCGAGAGGATATTCGCCAACGACAAGGGCAACTGGCAGGGCAGATTAATATCGGCATggggg < 1:227769/225‑1 (MQ=255)
gagcCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACAAGGGCAACTGGCAGGGCAGATTAATATCGGCATGGGGGCCAGt < 2:299635/238‑1 (MQ=255)
agcCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGCCTACTTCTTGAAGAGCTGCCCGAAGCCCAACAGGATATTCGCCAACGACAAGGGCAACTGGCAGGGCCAAATAAAAACGGCCGTGGGGCCAGAAt > 1:920077/1‑239 (MQ=255)
cgatttttGAATTTTGCGAAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAAAAGGGTTAGCGGCGCAAGTTTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACAAGGGCAACTGGCAGGGCAGATTAATATCGGCATGGGGGCCAGTAt < 1:110754/230‑1 (MQ=255)
attgtGAAAATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGGGGTAGAAAAAGGGTTAGCGGCGCAACTCTTTTGTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACAAGGGCAACTGGCAGGGCAGATTAATATCGGCATGGGGGCCAGTATTTCCCg < 2:1121408/235‑1 (MQ=255)
tGTTGAATATGTCGAAACCGGAACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGGGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACAAGGGCAACTGGCAGGGCAGATTAATATCGGCATGGGGGCCAGTATTTCCCGc < 2:206575/239‑1 (MQ=255)
gTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACAAGGGCAACTGGCAGGGCAGATTAATATCGGCATGGGGGCCAGGATTTCCCCCAGTCTGATg > 2:863531/1‑238 (MQ=255)
cGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACAAGGGCAACTGGCAGGGCAGATTAATATCGGCATGGGGGCCAGTATTTCCCGCAGTCTGATGCCa > 2:760950/1‑239 (MQ=255)
cGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGAGACGTTAACTGATGCCGGT‑GAACGTTTTTATCAGCACGCAAGTCTAATTCTTGAAGAGCTGCGCGCAGACCAAGAGGAGATTCGCCAACGCCAAGGGCAACTGGCCGGGCAGATTAAAACTGGCATGGGGGCCAGCATTTCCCGCCGCATGATGCCa > 1:1022696/1‑239 (MQ=255)
gCAACCGGCCTTGA‑GTAAATCTATTCGGGAGCTAAAAGAGGGTTTAGCGGGGCAACGCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACAAGGGCAACTGGCAGGGCAGATTAATATCGGCATGGGGGCCAGTATTTCCCGCAGTCTGATGCCAg < 1:314282/239‑1 (MQ=255)
ccctccGGCATTGG‑TTAAATTTTTGAAGGAGATAGAAGAAGGTTTAGGTGCGCAACTTTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACGGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACAAGGGCAACTGGCAGGGCAGATTAATATCGGCATGGGGGCCAGTATTGCCCGCAGTCTGATGCCAg < 1:1047418/235‑1 (MQ=255)
cccaCCGGCACTTA‑TTAACTTTATTACGGATGTAGAAGAAGGGTTGGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGCCGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACAAGGGCAACTGGCAGGGCAGATTAATATCGGCATGGGGGCCAGTATTTCCCGCAGTCTGATGCCAg < 1:863531/236‑1 (MQ=255)
ccacccgggcctggtttaattttttCGGGAGGTAGAATAAGGTTGAGCGGCGCAATTGTTTTTTGGCCGTAGTAAAGGCGGGACGTTAACGGAGGCGGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACAAGGGCAACTGGCAGGGCAGATTAATATCGGCATGGGGGCCAGTATTTCCCGCAGTCTGATGCCAg < 1:505621/216‑1 (MQ=255)
gA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACAAGGGCAACTGGCAGGGCAGATTAATATCGGCATGGGGGCCAGTATTTCCCGCAGTCTGATGCCAGCTGTCATAtct‑c > 2:860378/1‑239 (MQ=255)
a‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGCCAAGGGCAACTGGCAGGGCAGATTAATATCGGCATGGGGGCCAGCATTTCCCGCAGTCTGATGCCAGCTGTCATGTCT‑Cg > 2:1185049/1‑239 (MQ=255)
ttCAGGAGCTGGAAGAGGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGCCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACAAGGGCAACTGGCAGGGCAGATTAATATCTGCATGCGGGCCAGAAGTTCCCGCAGTCTGCTGCAAGCTGCCAT‑TCTCCGTTTtaatca > 1:1238270/1‑238 (MQ=255)
ttCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACAAGGGCAACTGGCAGGGCAGCTTAATATCGGCCTGGGGGCCAGAATTTCCCGCAGTCGGATGCCAGCGGTAAAATCC‑CGtttgaataag > 1:511661/1‑232 (MQ=255)
ttCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACAAGGGCAACTGGCAGGGCAGATTAATATCGGCATGGGGGCCAGTATTTCCCGCAGTCTGATGCCAGCTGTCATATCT‑CGTTTtcatca > 2:99224/1‑238 (MQ=255)
ttCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACAAGGGCAACTGGCAGGGCAGATTAATATCGGCATGGGGGCCAGTATTTCCCGCAGTCTGATGCCAGCGGTCATATCT‑CGTTTtcatca > 2:507593/1‑238 (MQ=255)
ttCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACAAGGGCAACTGGCAGGGCAGATTAATATCGGCATGGGGGCCAGTATTTCCCGCAGTCTGATGCCAGATGTCATATCT‑CGTTTtcatca > 2:874177/1‑238 (MQ=255)
ttCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTAGCCAACGACAAGGGCAACTGGCAGGGCCGATTAATATCGGCATGTGGGCCCGTATTTCCCGCAGACTGCGGCCAGCTGTCATATCC‑GGTTTtcgaga > 1:849791/1‑234 (MQ=255)
gAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACAAGGGCAACTGGCAGGGCAGATTAATATCGGCATGGGGGCCAGTATTTCCCg > 2:7216/1‑197 (MQ=255)
gAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACAAGGGCAACTGGCAGGGCAGATTAATATCGGCATGGGGGCCAGTATTTCCCg < 1:7216/197‑1 (MQ=255)
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ACTGATTTTTCACAGTTTTAACCGTTCATAAATTACCCTGACACAATCATCTGCATTAAAGTAGATGCCAGTTTCTTTGGTCTGATAAATAACGGTTATCGGTGGCGTCATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGA‑GTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGT‑GAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACAAGGGCAACTGGCAGGGCAGATTAATATCGGCATGGGGGCCAGTATTTCCCGCAGTCTGATGCCAGCTGTCATATCT‑CGTTTTCATCAG > NC_000913/1404632‑1405097
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
