Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F18 I0 R1
|
274 |
115.5 |
2655328 |
86.7% |
2302169 |
226.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,699,211 |
G→T |
14.7% |
L333F (TTG→TTT) |
bcsG → |
DUF3260 family cellulose production inner membrane protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,699,211 | 0 | G | T | 14.7%
| 261.6
/ 6.7
| 115 | L333F (TTG→TTT) | bcsG | DUF3260 family cellulose production inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base G (29/66); new base T (16/2); total (46/69) |
| Fisher's exact test for biased strand distribution p-value = 4.59e-06 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 115 total aligned reads displayed.
GCATCCACTGTGGTCGCATTTCGATATTGAGTTCAAGAACTTTAACTCCGCCACCTCCTACAGTGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGC‑ACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAACAGCCGTAGTGCCACGTTCT‑ACAACACGCTTCCACTGCATG‑ACGGCAACCATTATCCGGGGGTCAGCAAAACAGC > NC_000913/3698983‑3699435
|
gCATCCACTGTGGTCGCATTTCGATATTGAGTTCAAGAACTTTAACTCCGCCACCTCCTACAGTGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGC‑ACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGGTTTTTTGAaag‑agttc > 2:1252747/1‑235 (MQ=255)
aTCCACTGTGGTCCGATTTCGATATTGACTTCAAGAACTTTAACTCCGCCACCTCCTACAGTGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGC‑ACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑Tcgc < 2:306726/239‑1 (MQ=255)
ctttgGTCCCATTTCGATTTTGAGTTCAAGAACTTTAACTCCGCCACCTCCTAAAGTGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGC‑ACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGaaaa < 2:307269/236‑1 (MQ=255)
cgtgggTCGCTTTTCGATATTGAGTTCAAGGACTTTACCTCCGCCACCTCCTACAGTGGCCTGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGC‑CCACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGaaaa < 2:374949/235‑1 (MQ=255)
tgtgGTCGCATTTCGATATTGAGTTCAAGAACTTTAACTCCGCCACCTCCTACAGTGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGC‑ACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGCTAACCTTTCGAAACTGGGCTTTACCCACCCCCTGATGATGGGACATAACGGCACGTTCGGC‑GGTTTTTTTGAAA‑AA‑AT‑TTGCGaaaaa > 1:469353/1‑238 (MQ=255)
tgtgGTCGCATTTCGATATTGAGTTCAAGAACTTTAACTCCGCCACCTCCTACAGTGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGC‑ACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATAATGGGACATAACGGCCAGTTCGGC‑GGGTTTTTTAAAT‑AA‑GT‑TTGCTGAAAt > 2:602473/1‑239 (MQ=255)
gtgGTCGCATTACGATATTGAGTTCAAGAACTTTACCTCCCCCCCCTCCTACAGTGGCCGGGCGGCGATCCTTTTCCTGCGCGCCAGCTGCGGGCAGACTTCGC‑ACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATg < 2:597775/239‑1 (MQ=255)
tgGTCGCATTTCGATATTGAGTTCAAGAACTTTAACTCCGCCACCTCCTACAGTGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGC‑CCACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTATTTGATAACCTTTAGAAACAGGGCTTTACCCAGCACCTGAGGATGGGCCATAAAGGCAAGTCTGGG‑GGGTTTTTTAAAA‑TA‑GT‑Tctgggacaaag > 1:1312644/1‑229 (MQ=255)
gCATTTCGATATTGAGTTCAAGAACTTTAACTCCGCCACCTCCTACAGTGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGC‑ACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGGTTGATAACCTTTCGAAACTGGGCTTTACCAAGCACCCGATGCTGGGACAATACGGCCCGTTTGGC‑GGGTTTTTGTAAA‑AA‑GT‑TACGGAAAAAgggggcg > 1:1252915/1‑238 (MQ=255)
aTTTCGATATTGAGTTCAAGAACTTTAACTCCGCCACCTCCTACAGTGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGC‑ACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTTaaaa‑aaatagtcgaaaaaaggggggag > 1:306361/1‑218 (MQ=255)
tttCGATATTGAGTTCAAGTACTTTAACTCCGCCACCTCCTACAGTGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCCGCGGACAGACTTCGC‑ACACTAATCTGTATCAACCGGCAAATAACGACTGCTATATGTTTGATAACCTTTCCAAACTGGGCTTTACCCAACACCTGATGTTGGGAGCTAAAGCACAGTCCGGA‑GGTTTTTTAATAG‑AA‑GTCTCGCAaaaaacggagagac > 1:518452/1‑229 (MQ=255)
tttCGATATTGAGTTCAAGAACTTTAACTCCGCCACCTCCTACAGTGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGC‑ACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTTAAAGAAA‑GT‑TCGGGaaagagcggcatg > 2:924839/1‑228 (MQ=255)
tttCGATATTGAGTTCAAGAACTTTAACTCCGCCACCTCCTACAGTGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGC‑ACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTAACCAGCACCTGATGATGGGACATAACGGCCAGTTCGGG‑GGTTTTTTTTAAA‑GA‑GT‑TCGCGaaaaaagggggcgta > 1:509723/1‑228 (MQ=255)
tCGATATTGAGTTCAAGAACTTTAACTCCGCCACCTCCTACAGTGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGC‑ACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGGTTTTTTAAAG‑AA‑AT‑TCGCGGAAATTGGCGCATgtcg > 2:249091/1‑236 (MQ=255)
tCGATATTGAGTTCAAGAACTTTAACTCCGCCACCTCCTACAGTGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGC‑ACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGACCCTGATGATGGGACATAACGGCCAGTTTGGCGGGTTTTTTGAAA‑‑AA‑AT‑TTGCGAAAATggcggcgacgag > 1:1118903/1‑233 (MQ=255)
aGTTCAAGAACTTTAACTCCGCCACCTCCTACAGTGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGC‑ACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGCCATAACGGCCAGGTCGGC‑GGATTTTTGTAAG‑AA‑GT‑TCGGGCAAAAGGCGGCATCCAGAGC‑GGAtta > 2:109498/1‑238 (MQ=255)
ttCAAGAACTTTAACTCCGCCACCTCCTACAGTGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGC‑ACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGGTTTTTGGAAG‑AA‑GT‑TCGCGAAAAGTGGGGGATGCAAGAC‑GAATTgtg > 2:179355/1‑237 (MQ=255)
ttCAAGAACTTTAACCCCTCCACCTCCTACAGTGGCCCGGCGGCTATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGC‑ACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGa < 2:715061/238‑1 (MQ=255)
tCAAGAACTTTAACTCCGCCCCCTCCTACAGTGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGC‑ACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑Tg < 2:820035/239‑1 (MQ=255)
atgtccTTTAACCCCCCCCCCTCCCTCAGTGGCCCGGCGGCGCTCCGTTTACTGCGCGCCAGGTGCGGGCAGACTTCGC‑ACACTAACCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGa < 1:451039/234‑1 (MQ=255)
ccACCTCCTACAGTGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGC‑ACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATTATGGGACATAACGGCCAATTCGGC‑GGTTTTTTTTAAG‑AAGGT‑TGGCGAAAA‑GACGGCCTGCGGAGC‑GCATTGA‑ggggaaacaaaaaaatgccg > 1:697354/1‑222 (MQ=255)
ccACCTCCTACAGTGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGC‑ACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTTAAAG‑AA‑GT‑TTGCGGAAATGGCGGCATGCCGAGC‑GGATTTA‑TGGGTCAAA‑CAAAACTCCCg > 2:916871/1‑239 (MQ=255)
ctgggCCCGGCGGAGTTCCGTTTACGGCGCGCCAGCTGCGGGGACACTTCGC‑ACACTAATCTGTATAAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑t < 1:916871/236‑1 (MQ=255)
tGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGC‑ACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGCCATAACGGCCAGTTCGGC‑GGGTTTTTGTAAG‑AG‑AT‑TCTCGAAAAAAGCGGCAATCACGGC‑GAATTTA‑TTGGAcaaa‑aaaaaacaccgggttttttttggg > 1:1112771/1‑219 (MQ=255)
tGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGC‑ACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTTAAAG‑AA‑GT‑TCGCGAAAATGGCGGCAGGCAGAGG‑GAATTGT‑TGGATCAAA‑AAAATATGCCGGGTATTTtgg‑tg‑g > 2:1322739/1‑239 (MQ=255)
ggCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGC‑ACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTTAAAC‑AA‑GT‑TCGCGAAAATGGCGGGCCGCACGGC‑GGATTTT‑TGGGGCAAA‑AAAATATGCCGGGTTTTTTTT‑Tg‑gg > 1:902707/1‑239 (MQ=255)
gCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGC‑ACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTTAAAG‑AA‑GT‑TCGCGGAAAAGGCGGCATTCAGAGC‑GGAATGATTGGTTCAAA‑‑AAATCTGCCCGGTATTTTGT‑Tg‑g > 2:177294/1‑237 (MQ=255)
gCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGC‑ACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTTAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GGATTGA‑TGGGTCAAA‑CAAATCTGCCGGGTATTTTGC‑Tg‑ggg > 2:597917/1‑238 (MQ=255)
ttctttttctgccggacaggaccGGTCAGTCTTCGCAACAC‑AATCTGGATCCAGCGGCAAATAAAGACTGATATCGTGTTGCTAACCTTTCGGAGCTGGGTGTTACACAGCCCCAGATGATGGTGCATGGCTGCCAGATCGGC‑GGTTTTGTGAAAG‑AA‑GT‑TCGCGAGAATGGCGGCATGCAGAGC‑GGGTTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCg < 1:1057360/217‑1 (MQ=255)
ctttttcctccccgcatgttGCGGTCAGATTTCGC‑ACCTTAACCTGTATCAACCGGCAAATAACGACTGTTTTCTGTTTGATAACCGTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGc < 1:37429/220‑1 (MQ=255)
ccGTTTACTGCGCGGCAGCTGCGGGCAGACTTCGC‑ACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCg < 2:697354/238‑1 (MQ=255)
gcgcgcCAGCTGCGGGCAGACTTCGC‑ACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATggcg > 2:893686/1‑164 (MQ=255)
gcgcgcCAGCTGCGGGCAGACTTCGC‑ACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATggcg < 1:893686/164‑1 (MQ=255)
cgcgcCAGCTGCGGGCAGACTTCGC‑ACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCCTGCCGAGC‑GGATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGT‑CG‑GGCTTTTATGGTTCGCCGGTTTATg > 2:600239/1‑238 (MQ=255)
tcacggtgggggctgccctCGC‑ACTCTAATGTTGACAAACCGACAAATATCGGCTGCTATCTGGTTGATAAACTTTCCAACCTGGGCTTTACCCAGCACCAGATGACGGAACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑a < 1:109498/221‑1 (MQ=255)
gcCAGCTGCGGGCAGACTTCGC‑ACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTTAAAG‑AA‑GT‑TCCGGACAATAGGGGCCTGCAGGGC‑GAATTGA‑TGGATCAAA‑CAAATATTCCGGTTATTTTGC‑AG‑GGGTTTGTTGGTTTGCCGGGTTATGACG‑a > 2:631560/1‑239 (MQ=255)
ccAGCTGCGGGCAGTCTTCGC‑ACACTAACCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑a < 2:489047/238‑1 (MQ=255)
gCTGCGGGCAGACTTCGC‑ACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGGAAA‑AA‑AT‑TCGCGAAAAATGCGGGCTGGAAAGC‑GAGATTT‑TGGAGCAAA‑AAAAACTGCCGGTTATTTTGC‑GT‑GGCGTTGTAGGTTCGCCGGGTTAtatcacaacc > 1:252762/1‑230 (MQ=255)
tGCGGGCAGACTTCGC‑ACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GC‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCg < 2:475871/238‑1 (MQ=255)
tGCGGGCAGACTTCGC‑ACACTAATCTGTAACAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCg < 2:82355/238‑1 (MQ=255)
atgtgtataagagcccgcccTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCg < 2:644203/219‑1 (MQ=255)
tCGC‑ACCCTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCg < 2:306361/239‑1 (MQ=255)
tCGC‑ACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCg < 2:146983/239‑1 (MQ=255)
tCGC‑ACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCg < 2:469353/239‑1 (MQ=255)
aatAATCTGTATCACCCGGAAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACGGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGc < 1:1020621/200‑1 (MQ=255)
aaTCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TTGCGGAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CCAAGATGCCGGTTATTTTTC‑TG‑GGCTTTTATGGGTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCgctggc‑ttg > 2:1036291/1‑236 (MQ=255)
tCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGTAAG‑AA‑GT‑TCGCGAAAATGGCGGCAAGCCGAGC‑GAATTTA‑TGGGTCAAA‑AAAATCTGCCGGTTCTTTTGC‑TG‑GGCTTTGATAGGTTGCCGGGTTTTAACG‑ATACCCCCGTGC‑TTTAACGctggg‑tggggg > 1:885872/1‑236 (MQ=255)
aTCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGGAAG‑AA‑GT‑TCCGGAAAAAGGCGGCCTGCAAAGG‑GGATTGT‑TGGATAAAA‑AAAAACTTCCGGGTGTTTTTC‑TG‑GGGTTTTGTGGTTTCCCGGGTTTTTACGAAAACCCCTGTGT‑TAAAccctgggggggggttgcc > 1:122256/1‑223 (MQ=255)
aTCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑AAACCGCTTGGC‑TTAAACGCTGGC‑TGGACGTTTcc > 2:249357/1‑239 (MQ=255)
aTCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GG‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATAACGCTGTGC‑TTAACCGCTGGC‑TGGACGTTAcc > 2:19549/1‑239 (MQ=255)
aacGGCAAATAACGGCTGCTATTTGTTTGATAACCTTTCCAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTACGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑aaa < 2:203545/237‑1 (MQ=255)
aCCGGCAAATAACGCCTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGGTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑aaa < 2:509723/239‑1 (MQ=255)
aCCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TTGCGAAAATAGCGGGCAGCACGGG‑GGATTGT‑TGGATCCAA‑CCAAATTCCCCGTTATTTTTT‑CT‑GGCTTTGCTGGGTGCCCGGTTTTTTAAC‑AAACCCCTGTGG‑TTAACCgccgggcgggcgggtcagcaa > 1:17201/1‑223 (MQ=255)
aCCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAC‑AA‑GT‑TCTCGAAAATGGCGGCCTGCCGAGC‑GGGTTGT‑TTGGTCAAA‑CAAAACTGCCGGGTTTTTTTC‑TT‑GGCTTTTATAGGTTGCCGGTTTTTGACG‑AAACCGCATTGC‑TTAAACGCTGGC‑GGGACGTTACCG‑aaa > 1:310585/1‑239 (MQ=255)
ggCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAg < 2:1118903/239‑1 (MQ=255)
tGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAACAGCCg < 2:1244152/239‑1 (MQ=255)
tGCTATCGGTTTGATAACCTTTCGAAACGGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAACAGCCg < 2:1235234/239‑1 (MQ=255)
gtttttCTTTTTTAAAACCTTTCGAATCTGGGCTTTACCCAGGCACTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGAATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAACAGCCg < 1:1010362/234‑1 (MQ=255)
tCTGTTTGATAACCTTTCGAAACTGGGCTTTCCCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTGTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAACAGCCGTAGTg < 2:1184225/239‑1 (MQ=255)
tCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGGTTTGATGGTTCGCCGGTTTTTGACG‑GTACCGCTGGGC‑TTAACCGCCGGC‑TGGACGTTACCG‑GAAAAGGTAAACACAGCCGTAGt > 2:402649/1‑238 (MQ=255)
tCTGTTGGATAACCTTTCGAAACTGGGCTTTACCCAGCCCCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAACAGCCGTAGTg < 2:512155/239‑1 (MQ=255)
tttttGATAACCTTTCGAAACTGGGTGTTTCCCAGCACCTTGTGCGGGGACATAACGGCCCGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGGTAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCCAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAACAGCCGTAGTGcc < 1:111114/237‑1 (MQ=255)
tGTTTGATACCCTTTCGAAACGGGGCTTTACCCAGCCCCTGATGATGGGACATAACGGCCAGTGCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAACAGCCGTAGTGcc < 2:647001/239‑1 (MQ=255)
tGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGcc < 2:800430/136‑1 (MQ=255)
tGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAACAGCCGTAGTGcc < 2:122256/239‑1 (MQ=255)
tGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAACAGCCGTAGTGcc < 2:1013158/239‑1 (MQ=255)
gTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAACAGCCGTAGTGCCa < 2:291057/239‑1 (MQ=255)
tttGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTTTAAG‑AA‑GG‑TCGCGAAAAAGGGGGCAAGCAGAGC‑GAATTTA‑TGGGTCAAA‑CAAATCTTACGGGTATTTTTCTTG‑GGGTTTTGTGG‑TCGCCCGGTTTTGACG‑ATAACCCCGTGC‑TTAAACCCTGGCGTGGGCGTACCCC‑AAAAAAAAAAAAACaccgacaggcaac > 1:1235234/1‑227 (MQ=255)
tttGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTTATGGTTTGCCGGTTTTTGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAACACCCGCACTGCCAc > 2:740789/1‑239 (MQ=255)
tttGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTTTGACG‑ATACCGCTTTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAACAGCCGTAGTGCCa > 2:1010362/1‑238 (MQ=255)
ttGATAACTTTGTGAACGCGGGTTTTACCCAGCCCCTGGAGGTGGGACATAACGGCCAGTTCGGG‑GGTTTGTGTAAAG‑AA‑TT‑TCACGAAAATGGCTGCATGCAGAGA‑GAAGTGA‑TGGAGCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGGTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAACAGCCGTAGTGCCACg < 1:1322739/239‑1 (MQ=255)
ttGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTGCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAACAGCCGTAGTGCCACg < 2:902707/239‑1 (MQ=255)
ttGATAACCTTTCGAAACGGGGCTTTACCCAGGACCTGATGATGGGAAATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAACAGCCGTAGTGCCACg < 2:14306/239‑1 (MQ=255)
gATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑GA‑AT‑TCTCCAAAATGGCGGCACGCAGAGC‑GAATTTG‑TGGCTCAAA‑ACAATCTTCCGGTTATTTTTC‑TG‑GGCTTTGTTGGTTTCACGGCTTTTTGCC‑ACTCCGCTGGGC‑TTAACCGGTTGG‑TGGGAGGTACGG‑AACAAGATaaaaaaaagagcagtggcgacgg > 1:558943/1‑221 (MQ=255)
ccTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GG‑TCGCGGAAATGGCCGCCAGCACGAC‑GGATTTT‑TGGATTAAAGCAAAAC‑ACCGCGTATTTTTC‑TGAGGCTTT‑TGGGGTGGCCGCGTTTTGACG‑AAACCCCCGTGCTTTACCCCCTGGT‑CGGA‑GTTACCG‑GAAAAGAGaaaaaaacacgaggagccaccgccaacc > 1:36536/1‑216 (MQ=255)
cTTTCGAAATTGGGCTTTTCCAAGACCTTGATGGGGGGAAATAGCGGCCAGGTCGGG‑GGTTTTTGGAAAG‑AA‑GG‑TCGCGAAAATGGCGGCATGCAGGGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCGGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAACAGCCGTAGTGCCACGTTCT‑acaa < 1:600239/239‑1 (MQ=255)
cTTTCGAAATGGGGCTTTACCCAACACCTGATGATGGGCAAAAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑GCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACGG‑AAAAAGATAAAAACAGCCGTAGTGCCACGTTCT‑acaa < 1:718124/239‑1 (MQ=255)
cTTTCGAAACGGGGCTTTCCCCAGCACCTGATGATGGGAAATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAACAGCCGTAGTGCCACGTTCT‑acaa < 2:504177/239‑1 (MQ=255)
ttCGAACCTGGGCTTTACCCGGCACCGTATGATGGGAAATTACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAAGCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAACAGCCGTAGTGCCACGTTCT‑acaaca < 2:817732/239‑1 (MQ=255)
ttCGAAACGGGGCTTTACCCAGCACCTGATGATGGGAAATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAACAGCCGTAGTGCCACGTTCT‑acaaca < 2:1186690/239‑1 (MQ=255)
aCTGGGCTTTACCCAGCACCGGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAACAGCCGTAGTGCCACGTTCT‑ACAACACGCTTc < 2:885872/239‑1 (MQ=255)
tggtgtttACCCGGGGCCTGTAGGTGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAAGGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTGCCG‑AAAAAGATAAAAACAGCCGTAGTGCCACGTTCT‑ACAACACGCTTCCa < 2:223495/234‑1 (MQ=255)
tttACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAACAGCCGTAGTGCCACGTTCT‑ACAACACGCTTCCACTGCa < 2:543107/239‑1 (MQ=255)
ttACCCAGCACCTGATGATGGGACATAACGGCCAGGTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAACAGCCGTAGTGCCACGTTCT‑ACAACACGCTTCCACTGCAt < 2:65885/239‑1 (MQ=255)
gCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTTGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAAAAGCCGTAGTGCCACGTTCT‑CCAAACCGCTTCCCCTCCCTG‑ACGGCa > 2:204450/1‑239 (MQ=255)
cACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTTAAAG‑AA‑GT‑TCGCGGAAATGGCCGCCAGCAGGGC‑GAATTGA‑TGGATCAAA‑CAAATCTGACGGGTCTTTTTC‑TG‑GGCTTTGTTGGTTTGCCGGCTTATGACG‑CACACGCTGTGC‑TTAACCCCCGGC‑TTGACGTTTCCGTCAAAAGAT‑AAAACAGCCCTACGTCCACCTTCTCACAACACCCTAcccagcataacagaaa > 1:284670/1‑225 (MQ=255)
ctggggaaggtaCATAACGGCCAGTTCGGC‑GTTTTTTAGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGACGGTTATTTTGC‑TG‑GGCTTTGAGGGTTCGCCGGTTTATGACG‑ATCCCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAACAGCCGTAGTGCCACGTTCT‑ACAACACGCTTCCACTGCATG‑ACGGCAACCa < 2:809132/228‑1 (MQ=255)
cTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GG‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAACAGCCGTAGTGCCACGTTCT‑ACAACACGCTTCCACTGCATG‑ACGGCAACCa < 2:1075803/239‑1 (MQ=255)
gatgatGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAGTTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAACAGCCGTAGTGCCACGTTCT‑ACAACACGCTTCCACTGCATG‑ACGGCAACCAtt < 2:310585/239‑1 (MQ=255)
gatgatGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCCGCATGCAGAGCAGAATGTA‑TGG‑TCAAG‑AAAAACTGCCGGTTAATTTGC‑TG‑GGCCTTGATGGTTCGCCAGGTTATTACG‑CGAACCCTGTGC‑TTAACCGCTGGG‑TTGGCGCGCCCC‑TAAAAGATAAAACCAGACGAAAGCCCACGTTCC‑AAAAAAACCTTCCAcaaccaaaagggaaacaaa > 1:494941/1‑221 (MQ=255)
gatgGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAACAGCCGTAGTGCCACGTTCT‑ACAACACGCTTCCACTGCATG‑ACGGc < 2:927445/229‑1 (MQ=255)
gggAAAAAACGCCCGGTTCGGT‑GTTTTTTTTAAAA‑AA‑GT‑TCCAGAAAACGGCGGCATGCAGAGC‑AACTTTA‑TTGATCAAA‑CAAATCGGCTGTTTATTTTGC‑TG‑GGCTTTGATGTGTCGCCGGTTTATGACG‑ATCCCGCTTGGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAACAGCCGTAGTGCCACGTTCT‑ACAACACGCTTCCACTGCATG‑ACGGCAACCATTAGCCg < 1:687927/238‑1 (MQ=255)
ccATACCGGCCAGTTCGGG‑GGTTTTTTAAAAG‑AA‑GT‑TCGGCAAAATGTCGGCCAGCAGAGC‑GAATTGA‑TGGATCAAT‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAACAGCCGTAGTGCCACGTTCT‑ACAACACGCTTCCACTGCATG‑ACGGCAACCATTATCCgggg < 2:752571/237‑1 (MQ=255)
aaaTAACGGCCAGTTCGGG‑TGTTTTTAGAAAG‑AA‑GT‑TGGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAACAGCCGTAGTGCCACGTTCT‑ACAACACGCTTCCACTGCATG‑ACGGCAACCATTATCCgggg < 2:526126/236‑1 (MQ=255)
actAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGGGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATTTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAACAGCCGTAGTGCCACGTTCT‑ACAACACGCTTCCACTGCATG‑ACGGCAACCATTATCCGGGGGt < 2:638584/237‑1 (MQ=255)
cGGCCATGTCGGG‑GGTTTTTTGAAAG‑AA‑GT‑TCGAGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑CGGACGTTACCG‑AAAAAGATAAAAACAGCCGTAGTGCCACGTTCT‑ACAACACGCTTCCACTGCATG‑ACGGCAACCATTATCCGGGGGTCAGCa < 2:1312644/239‑1 (MQ=255)
ccAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCAAGCAGAGC‑GGATTTA‑TGGATCAAA‑AAAAACTGCCGGTTTTTTTTC‑TG‑GGCTTTTCTGGTTCGCCGGGTTATGACC‑CTAACGCCTGGC‑TTAAACGCTCGC‑TCGGCGTTACCG‑CAAAAGATAAAAACCACCGGAGGGCCCCGTTCT‑CCAAACCGCCTCCACTGCAAGAACGGC‑ACAACTATCCCGGGGCCGACaaaa > 1:1286848/1‑239 (MQ=255)
tCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAACAGCCGTAGTGCCACGTTCT‑ACAACACGCTTCCACTGCATG‑ACGGCAACCATTATCCGGGGGTCAGCAAAACa < 2:1112771/236‑1 (MQ=255)
tCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAAGTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCACTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAACAGCCGTAGTGCCACGTTCT‑ACAACACGCTTCCACTGCATG‑ACGGCAACCATTATCCGGGGGTCAGCAAAACa < 2:1283874/236‑1 (MQ=255)
tCGGC‑GGTTTTTGGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAACAGCCGTAGTGCCACGTTCT‑ACAACACGCTTCCACTGCATG‑ACGGCAACCATTATCCGGGGGTCAGCAAAACa < 2:485684/236‑1 (MQ=255)
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GCATCCACTGTGGTCGCATTTCGATATTGAGTTCAAGAACTTTAACTCCGCCACCTCCTACAGTGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGC‑ACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGC‑GGTTTTTTGAAAG‑AA‑GT‑TCGCGAAAATGGCGGCATGCAGAGC‑GAATTGA‑TGGATCAAA‑CAAATCTGCCGGTTATTTTGC‑TG‑GGCTTTGATGGTTCGCCGGTTTATGACG‑ATACCGCTGTGC‑TTAACCGCTGGC‑TGGACGTTACCG‑AAAAAGATAAAAACAGCCGTAGTGCCACGTTCT‑ACAACACGCTTCCACTGCATG‑ACGGCAACCATTATCCGGGGGTCAGCAAAACAGC > NC_000913/3698983‑3699435
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
