Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F18 I0 R1
|
274 |
115.5 |
2655328 |
86.7% |
2302169 |
226.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,975,376 |
A→G |
22.4% |
S78G (AGC→GGC) |
wecE → |
TDP‑4‑oxo‑6‑deoxy‑D‑glucose transaminase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,975,376 | 0 | A | G | 22.4%
| 157.7
/ 12.2
| 94 | S78G (AGC→GGC) | wecE | TDP‑4‑oxo‑6‑deoxy‑D‑glucose transaminase |
| Reads supporting (aligned to +/- strand): ref base A (50/20); new base G (15/8); total (66/28) |
| Fisher's exact test for biased strand distribution p-value = 6.06e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
TGATCACATGATTCCATTTAACGCACCGCCGGTGGTGGGAACCGAACTCGACTATATGCAGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCGT > NC_000913/3975138‑3975614
|
tGATCACATGATTCCATTTAACGCACCGCCGGTGGTGGGAACCGAACTCGACTATATGCAGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCACAGGGTTACT‑GACGCCGTCCTGCACCGCTTCCCTGGAGATGGCGGCGCTGCTGCTCGATATCCCGCCTGGGGCT‑GAAGTGGTACTGCCGa > 2:709436/1‑239 (MQ=255)
cacaTGATTCCATTTAACGCACCGCCGGTGGTGGGAACCGAACTCGACTATATGCAGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCCCGATATCCAGCCTGGCGAT‑GAAGGGATCATGCCGGGCTa > 2:449341/1‑239 (MQ=255)
tGATTCCATTTAGCGCACCGCCGGTGGTGGGAACCGAACTCGACTATATGCAGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAc‑c < 2:296669/239‑1 (MQ=255)
tCCATTTAACGCACCGCCGGTGGTGGGAACCGAACTCGACTATATGCAGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑AAGTTTTGGCAGCGCCAAAGGGTTACT‑GACGCCGTCCTGCACCCCTTCGCTGGAGATGGCGGCCCGGCTGCCCGGTATCCAGCCTGGCGAT‑GAAGGGATCATGCCAGGCTACAC‑CTT‑Tg > 2:1242497/1‑239 (MQ=255)
cATTTAACGCACCGCCGGTGGTGGGAACCGAACTCGACTATATGCAGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGGTATCCAGCCTGGCGCT‑GAAGGTATCATGCCGGCCCACAC‑CTT‑TGt > 2:399692/1‑238 (MQ=255)
tttAACGCACCGCCGGTGGTGGGAACCGAACTCGACTATATGCAGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGGGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCCCGATATCCAGCCTGGCGGT‑GAAGTGATCATGCCGAGCTACAC‑Ctt‑ttttt > 2:96165/1‑234 (MQ=255)
ttAACGCACCGCCGGTGGTGGGAACCGAACTCGACTATATGCAGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGGGCA‑CAGTTTTGGCAGCCCCAAAGTGTTACT‑GACGCCGTCCTGGCCCGCTTCCCTGGAGCTGGCGGCGCTGCTGCTCGCTATCCACCCTGGCGAT‑TAAGTGATCATGCCGGGCTACAC‑CAT‑TGtctc > 1:857736/1‑238 (MQ=255)
cGCACCGCCGGTGGTGGGTACCGAACTCGACTATATGCAGTCGGCAATGGGTAGCGGCAAACTGGGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGCGGTCGGGTCA‑ACGTTTTTGCAGCGCCAAAGTGTTACTCGAC‑CCGTTCTGCACCGCTCCCCCGGAGATTGCGCGTGTGCCGCCCGATCTCCACCCCGGCGTG‑GAAGTGACCAGACCGCGCTACCC‑CTT‑TGTCTCCGcc > 1:1009802/1‑238 (MQ=255)
cGCACCGCCGGTGGTGGGAACCGAACTCGACTATATGCAGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCCCGGTATCCAGCCTGGCGAT‑GAAAGGATCATGCCGAGCTACCC‑CTT‑TGTCTCCAcc > 2:147190/1‑238 (MQ=255)
cgccgGTGGTGGGAACCGAACTCGACTATATGCAGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCCAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGGGATGGCGGCGCTGCTGCTCCATATCCAGCCCGGCGAT‑GAAGGGGTCAGTGCGAGCTAAAC‑CCT‑TGCCCCCACCCCCAAt > 1:388591/1‑239 (MQ=255)
cgccgGTGGTGGGAACCGAACTCGACTATATGCAGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGGTATCCAGCCTGGGGAT‑GAAGTGATCATGCCGAGCTCCAC‑CTT‑TGTCTCCACCCCCaa > 2:1305233/1‑238 (MQ=255)
aaCCGAACTCGACTATATGCAGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGGGATCATGCCGGGCTACAC‑CTT‑TGTCTCCACCGCCAAA‑GCCTTTGtgcttc > 2:202092/1‑237 (MQ=255)
aaCTCGACTATATGCAGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGGGCTACAC‑CTT‑TGt > 2:267709/1‑208 (MQ=255)
gACTATATGCAGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGGGATCATGCCGGGCTACAC‑CTT‑TTTCTCCACCGCCAAT‑GCCTTTTTGCTGCCGGGCGC‑aaa > 2:821137/1‑239 (MQ=255)
gCAGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGGGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGttt > 2:204494/1‑239 (MQ=255)
aGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCCAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGGGCCGCTGCCCGATATCCCGCCTGGCGAT‑GCAGTGATCATGCCCGGGTACCC‑CCT‑TGTCTCCCCCGCCCAA‑GCCCTTGGGTTGCGTGGGCC‑AAAAACCGttttt > 1:702277/1‑239 (MQ=255)
aGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGGGGTGGCGGCGCTGCGGCTCGGTTTCCAGCCCGGCGCT‑CAGCGGGTCATGCCGGCCTCCAC‑CCT‑TGTCTCCCCGCCCAAT‑GCCTTTTGGCTGCGTGGGGC‑aaaaacagatttg > 1:401957/1‑231 (MQ=255)
aGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGAAATCCAGCCTGGCGAT‑GAAGGGATCATGCCGGGCTACAC‑CTT‑TGTCTCCACCGCCCAT‑GCCTTTGTGCTCCCTGGCGC‑CAAAATCGttttt > 2:254898/1‑239 (MQ=255)
aGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGGGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGttttt > 2:393534/1‑239 (MQ=255)
aGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGGGTTACG‑GACGCCGTCCTGCCCCGCTTCGCTGGGGATGGCGGACCTGCTCGCCGCTATCCATCCTGCCGAT‑GAAGGGGTAATTGCGGTCTAACC‑CTT‑TGTACCCACCCCCCAA‑GCCTTTTTGGCGCGGGGCGC‑AAAAAAAGttttt > 1:996534/1‑239 (MQ=255)
tCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑CAAAATCGttttttt > 2:545796/1‑237 (MQ=255)
tCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGGGGCTGGGGCG‑ACGTTTTGGCAGGGCCACAGTGTTACT‑GACGCCGTCCTCCACCGCTTTCCTGGGGATGGGGGCGCGCCTGCTCGGAATCCAGCCTGCCGAT‑GACGGTATCCAGCCGGGCACCCCACTT‑TGTC‑CCACCGCCAAC‑ACCCTTTTGCTACGGGGGGC‑AAAAAACCttttttt > 1:500571/1‑237 (MQ=255)
tCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGGGGCTGGAGCC‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCCTCGCCGGAGATGGCGGCGCTGCTGCCCCATATCCAGCCTGGGGAT‑GAAGGGATCCTGCCGAGCCACCA‑CTT‑TGTCCCCCACGCCCCA‑CCCTTTTTGACGCGGGGGGC‑ACAAAACtttttttg > 1:1143395/1‑237 (MQ=255)
tCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGGGGCTGGAGCA‑ACGTTTTGGCAGACCCAAAGTGTTACT‑GCCGCCGTCCTGCACCCCTTCGCTGGAGGTGGCGGCGCTGCTGCTCGGTATCCAGCCTGGCGATGGAAGT‑ATCATGCCCGGCTACCC‑CCT‑TGTCTCCCCCGCCCATACCCTTTTTCTTGGGGGGCCC‑AAAAA‑CGTTTTtgt > 1:149980/1‑239 (MQ=255)
ggCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGGTATCCAGCCTGGCCGT‑GAAGTGACCATGCCGAGCTACAC‑CTT‑TGTCTCCACCCCCACT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTgg > 2:610600/1‑239 (MQ=255)
gCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GCAGGGATCATGCCGAGCTACAC‑CTT‑TGGCTCCACCGCCAAT‑GCCTTTGGGCTGCGTGGCGC‑AAAAATCGTTTTtgtg > 2:181655/1‑237 (MQ=255)
gCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGGGGCTGGAGCA‑ACGTTTTGGCAACGCCAAAGTGGTACT‑GACGCCGTCCTGCCCCGCTTCGCTGGAGAAGGGGGCGCCGCCGCCCGATACCCAGCCAGGCTGT‑AAAGCAATCCTGCCGGGGTAAAC‑CTT‑TGTCTCCCCCGCCAAG‑TCCTTTTGGCCGTGTGGGGG‑CAAAATGCGTTTTGTGGa > 1:945360/1‑239 (MQ=255)
gattGGGTAGCGGCAACTTGTGGGGAGATGGGTGTTTTACCCGGCGCTGCCAGTAGTGGC‑GGGGCACACGTTTGGGCAGGGCCAAAGTGTTACG‑GCCCCCGGCCGGCACCGCGGCGGGGGAGATGGGGGCGCTGCTGCTCGATATCCGGCCTGGCGAT‑GAGGTGATCAGGCCGGGCTACCC‑CTT‑TGTCTCCGCCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGa < 1:96165/235‑1 (MQ=255)
ggTCGCGGCAAACGGGGGGGCGATGGGGGTTTTCCCGGTCGCTGCCAGCAGTGGCTGGAGCA‑ACTTTTTGGCAGCGCAAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGtt < 2:35831/237‑1 (MQ=255)
ggTAGGGGAAAACTGGGGGGCGATGGCGGTTTTACCCGGCGCTGCCAGCAGTGGATGGAGCA‑ACGTTTGGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGtt < 2:929249/237‑1 (MQ=255)
ggaaaaCGGTGTGGCGATGGCGGTTTCACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTGGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCgg < 2:1005807/235‑1 (MQ=255)
gcaagtgttttgggggtggggtttttACCCGCCGCTGCCAGCAGGGGCTTGGGCA‑CCTTTTTGGCAGGGCAAAAGTGTTCTG‑GGCGCGCTCCGGCACCGCTTGGGTGGAGATGGCGGCGCTGCTGCTCGTTATCCAGCCTGGCAAT‑GAAGTGATATTGCGGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑a < 1:11057/216‑1 (MQ=255)
gCAACCTGTGGGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑TTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑a < 2:857736/238‑1 (MQ=255)
gtggtgggcgtGGGGGTTTTCCCCTGCGCTGCCAGGAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCAAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATACCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACCC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATg < 2:996534/229‑1 (MQ=255)
gtgtgGCGGTGGCGGTTTTCCCGGTCGCTGCCAGCAGTGGCTGGAGCA‑CCGTTTGGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCCCCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACCC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATg < 2:562742/238‑1 (MQ=255)
tgGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCCAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTTCTCGATATCCAGCCTGGCGAT‑GCAGGGATAAGTCCCAGACACAC‑CTT‑TTTGTCCCCCGCCCAT‑GCCTTTTGTCTGCGTGGCCCAAAAAACCGTTTTTG‑GGGTGTTCGccccggaccccgtaaa > 1:950802/1‑225 (MQ=255)
tGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCCCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTTTGGATGTTCGCCCGG‑CACCCATGAACactcacg > 2:486045/1‑233 (MQ=255)
gcgcTTTTACCCGTCGCCGCCGGCAGTGACTACTGCA‑ACCTTTTGGCTGCGCCAAAGCGCTACT‑GACGCCGTCCTGCACCGCTTCGCTGGATATTGCGGCGCTGCTGCTCGCTATCCTGCCTGGCGAT‑GAAGTAGTAAGGCCGAGCGACAC‑CAT‑TGTCTCCCCCGCCAAT‑GCCCTTGTGCCTCGTGGCGG‑AAAAAACGGTTTTTTGGCGTTTCGTCCGGCACAcctgcaccacggacaa > 1:191227/1‑225 (MQ=255)
gCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCCAGCTCCAC‑CCT‑TGTCTCCCACGCCAAT‑GCCTTTGTGCTGCCGGGCGC‑AAAAATCGTTTTTGTGGGTGTTCGCCCCG‑ACACCATGacaaccgaag > 1:562742/1‑228 (MQ=255)
gCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGGGAACATGCCGAGCTTCCC‑CTT‑TTTCTCCCCCCCCAAT‑CCCCTTGGGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTGTCCCGG‑ACCCCATAAAAAACGACGaa > 1:303172/1‑239 (MQ=255)
aGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGGTGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGCCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGA‑CAAAATCGTTTTTTTGGATGTTCGCCGGG‑ACCCCATGAACATCGACGAAACGCTGAATAGAGGGGCGATCACCGACAAAAcg > 1:1114290/1‑239 (MQ=255)
aGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCCCCGACAAAAc > 2:601454/1‑238 (MQ=255)
ccA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGGTCGCCCGG‑ACACCATGAAAATCGAGGAAAAGCCGATTGAAGCTGCGagaaacagaaaaacaa > 1:229357/2‑224 (MQ=255)
cGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGCTGTTCGCCCGG‑CCACCATGAACATCGACGAACCCCTGATTGAATCGGCGATCACCGCCaaaccccccgt > 2:330649/1‑231 (MQ=255)
cGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑CCACCATGAACATCGACGAAACGCTGATTGAAGTGGCGATCACAGACAAAACGCGCGt > 2:939846/1‑239 (MQ=255)
cGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGA‑‑GAAGTGATCATGCCGGGCTACAC‑CTT‑TGTCTCCACCGCCACT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAGCACCGACGAAACGCGGATTAAAGCGGGAACCACCGACaaaccaccactt > 1:33602/1‑230 (MQ=255)
cGTTTGGGAAGCGCCAAGGTTTTCCT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACCC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGAt < 1:117564/171‑1 (MQ=255)
ttgggCAGCGCAAAAGTGTTACT‑GGCCCCGTCCGGCCCCGCTTCGTTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑TTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTAt < 2:950802/236‑1 (MQ=255)
agcagCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGACCATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACCCGCGGTa > 2:769335/5‑238 (MQ=255)
gcgcCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCgg > 2:117564/1‑171 (MQ=255)
cgcCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTTCTGCGTGGCGC‑CAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGCCGAAACGCTGCTTGAAGCGGCAACCCCCGAACAAACGCGCGGTAACCTGCggg > 1:1317399/1‑239 (MQ=255)
cgcCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑CCACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGCGCCg > 2:312213/1‑238 (MQ=255)
gcCAAGGTGTTACG‑GACCCCGTCCGGCCCCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCGGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCgg < 2:1001019/238‑1 (MQ=255)
caaaggtgtTACG‑GGCGCCGCCCGGCCCCGTTTCGGTGGAGATGGCGGCGCTGCTGCTCGATACCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCCCCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTc < 2:702277/234‑1 (MQ=255)
ttACT‑GACGCCGGCCTGCACCGCTTCGCGGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑Acg < 2:771037/238‑1 (MQ=255)
aCT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACCCg‑g > 2:485097/1‑239 (MQ=255)
cggccTGCCCCGCTTGGCTGGAGATGGCGGCGCTGTTGCTCGGTATCCAGCCTGGCGAT‑GAAGTTATCATGCCGGGTTACCC‑TTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGc < 2:149980/235‑1 (MQ=255)
cGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGCCAAAACGCGCGTTATCGTGCCGGTCCCTT‑ACGCG‑GGTGTGGcc > 2:925648/1‑239 (MQ=255)
aCCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCTTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAAt > 2:156986/1‑239 (MQ=255)
cccgtgcgggggAGAGGGGGGCGCTGCTGCTCGATTCCCATCCGGGCGAT‑GAAGTGATCATGCCGGGCTACCC‑CTT‑TGGCCCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATg < 2:361855/229‑1 (MQ=255)
ccGGTTCGTTGGGAATGCGGGCGCTGCTGCTCGATCTCCGGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATg < 2:1317399/239‑1 (MQ=255)
ccGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCG‑GCGAAATg > 2:1134115/1‑239 (MQ=255)
gCTTCGGGGGAGAGGGGGGCGCTGGTGCCCGATTTCCAGCCGGGCGAT‑GAAGTGATCATGCCGGGCTACCC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGa < 2:585826/239‑1 (MQ=255)
ctttttgtggttgtggggtgcctgctgccGTATTTCCAGCCGGGCGAT‑GAATTGCTCATGCCGAGCTACAC‑TTT‑GTTCTCCACCGCCAAG‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGa < 1:968165/218‑1 (MQ=255)
ctttCGCTGGGGGTGGCGGCGCTGCCGCTCGAGATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGa < 2:260482/237‑1 (MQ=255)
cTTCGCTGGAGATTGCGGCGCTGCAGCTCGATAACCCGCCTGGCGAT‑GAAGAGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGGGGCGC‑AAAACTCGTTTTTGCGGCTGTTCGCCCGG‑CCACCATGATCATCTCCGAAACCCTTATTGGCGCGGCGCACACCTGCAAAACACTCGTTAACATGCCTGTCCATT‑A‑GCGTGGCGGGGCCC‑ACGAAATGGaa > 1:934276/1‑238 (MQ=255)
cTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑TCCCCATTACCATGGCCGAAACGCTGATTGAAGCGGGCTTCACCGACAAAAACCCGGTTATCGCGCCGGTCCCTTAACGCG‑GG‑GGGGCCT‑GGGCAATgggc > 1:246453/1‑237 (MQ=255)
cTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAACTGGa > 2:433845/1‑238 (MQ=255)
cTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGa > 2:360295/1‑238 (MQ=255)
cTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGa > 2:837562/1‑238 (MQ=255)
cTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGGTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACACGCGCTATAGTGCCGGGCCATC‑ACCCG‑GGCGTGGCCG‑GCGaaaaaggc > 1:652348/1‑234 (MQ=255)
ttcgggggtgaTGGCGGCTTTGCTCTTCGTTACCCACCCGGCCGAG‑GAGTTGATCATGCCGGTCTACCC‑CTTGTGT‑TCCACCGTCAAT‑GCCTTTGGGGCGGGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGaca < 1:202092/230‑1 (MQ=255)
tgcGCTGGAGATGGCGGCGTTGCTGCCCGATATCCAGCTGGGCGAT‑GAAGTGATCATGCCGGGCTACCC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGaca < 2:303172/237‑1 (MQ=255)
cgcTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGACACCATTATGGCGTTGGCg > 2:1122715/1‑239 (MQ=255)
ctgctgctCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑AAACCATGACCACCGCCGAAACGCTGATTGAACCGGAGATCACCGACAAAAACACCGGAATCATGCCGGTTCACT‑TCCCC‑GCGGTGGCCG‑CGGAAAAGGAAACCACTGTGGGGTTGGCGaa > 1:892939/1‑239 (MQ=255)
ggtgccccgaattCCAACCGGGGGAT‑GAAGTGACTACGCCGGGCTACAC‑CTT‑TGTCTCACCCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGACACCATTATGGCGTTGGCGaaa < 2:1256936/227‑1 (MQ=255)
ttatCCCGCGTGGGAAT‑GAAGTGATCATGCCGAGCTCCCC‑TTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAAt < 2:388591/238‑1 (MQ=255)
tatCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGACACCATTATGCGGTTGGCGAAAAAGCAAAAtt > 2:756602/1‑239 (MQ=255)
aGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACCC‑CTT‑TGTCTCCACCGCCaa < 1:76193/52‑1 (MQ=255)
aGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCaa > 2:76193/1‑52 (MQ=255)
gcgtGGGGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAAtttgtttg < 2:1143395/236‑1 (MQ=255)
ccTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGc > 2:111922/1‑188 (MQ=255)
ggCGCT‑GAAGGGATCATGCCGAGCTACAC‑CTT‑TGTCTCCCCCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCACGG‑ACACCATGACCATCGCCGAAACGCTGATTGAAGCGGCGATACCCGACAAAACCCGCGTAATCTTGCCGGTCCATT‑ACCCG‑GGGGGGGCCT‑GAGACGGTGCAACCAATAGGGGCTTGGGGAAAACGTATAATTTTTTTggggg > 1:737344/1‑238 (MQ=255)
ggCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGACACCATTATg > 2:1261802/1‑207 (MQ=255)
ggCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGt > 2:39440/1‑239 (MQ=255)
ggCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGt > 2:1156322/1‑239 (MQ=255)
ggCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCACGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGCATAGGAGACCATTATGCCGTGGGCGACAAAGCA‑AAATTGTTTTTgggg > 1:309781/1‑237 (MQ=255)
ggCGAT‑GAAGTGATAATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGAGGATGTTCGCCCGG‑ACACCATGAACATCAACGAAACGATGATTGAAGCGGCGATCACCGACAAAACGCGCGGTATAGGGCCGGTCAATT‑AGGAG‑GTGGTGGCATGGCAACAGGCACACC‑TTTTGGGCTTGGGGGAAACGCAAAATTTGTTTGTggg > 1:659407/1‑238 (MQ=255)
aaGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATAGTGCCGGTCCATT‑AAGCG‑GGTGGGGCCT‑GCGAAAGGGGACCAATTATGGCGTTGGCGAAAAAAGATAATTTTTTTGTggggaaagag > 1:374562/1‑231 (MQ=255)
aaGTGATCATGACGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCACGG‑ACACCATGAACATCCACGAAACGATGATTGAAGGGGCGATCACCATCAAAACGCGAGATATCGAGCAGTTCAATT‑AAGCG‑GGGGGGGCCT‑GAGAAATGGACAGCATAATGGCAGAGGAGTAAAAGCAAAAAATGTTTATGGAaaaaggg > 1:543360/1‑237 (MQ=255)
caggCCGGGCTACCC‑ATT‑TGTCTCCACCGCCAAT‑GCCGTTGTTCTGGCTGGCGC‑AAAAATCGTTTTTGTTGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGGGATCCCCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTc < 2:394533/236‑1 (MQ=255)
tGCCGAGCTACCC‑TTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAg < 2:246453/239‑1 (MQ=255)
gCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑CCACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGCCAAAACGCGCGTTATCGTGCCGGTCCATT‑AGGCG‑GGGGTGGCCT‑GCGAAATGGCACCCATTATGGCGTTGGGGAAAAAGAATAATTTTTTTGTGGTAGAAAAAGcccgccagg > 1:439752/1‑232 (MQ=255)
gAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTTTGGTAGAAGATGCCGCCAAGGGCg > 2:11428/1‑239 (MQ=255)
gAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCg > 2:85102/1‑239 (MQ=255)
aGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCCTT‑ACTCG‑GGGGTGGCCT‑GCGAAATGGACACCGTTATGGCGTTGGCGGAAAACCATAATTTGTTTTGGGTAAAAAATGCCGcccgaggggg > 1:1281526/1‑230 (MQ=255)
aGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTTTGGTAGAAGATGCCGCTCAGGGCgg > 2:536002/1‑238 (MQ=255)
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TGATCACATGATTCCATTTAACGCACCGCCGGTGGTGGGAACCGAACTCGACTATATGCAGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCA‑ACGTTTTGGCAGCGCCAAAGTGTTACT‑GACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGAT‑GAAGTGATCATGCCGAGCTACAC‑CTT‑TGTCTCCACCGCCAAT‑GCCTTTGTGCTGCGTGGCGC‑AAAAATCGTTTTTGTGGATGTTCGCCCGG‑ACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATT‑ACGCG‑GGTGTGGCCT‑GCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCGT > NC_000913/3975138‑3975614
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
