Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F9 I0 R1
|
260 |
102.5 |
2178490 |
93.2% |
2030352 |
226.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,680,531 |
A→G |
11.4% |
I470T (ATC→ACC) |
yhjJ ← |
putative periplasmic M16 family chaperone |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,680,531 | 0 | A | G | 11.4%
| 246.1
/ 3.4
| 109 | I470T (ATC→ACC) | yhjJ | putative periplasmic M16 family chaperone |
| Reads supporting (aligned to +/- strand): ref base A (52/39); new base G (11/2); total (63/46) |
| Fisher's exact test for biased strand distribution p-value = 7.23e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 109 total aligned reads displayed.
CCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTC‑TATCCAGC‑TCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTAAGGAAATCCTGCCGCAGTTTCTGATATTGCTCCGGCG‑CGATATCGACAACCTGATTTTGCAACGAACGCATCCGCTGACCCATCAGAATATCGGTATCAGCTC > NC_000913/3680295‑3680768
|
ccGTTATTCAGTATCGGGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTC‑TATCCAGC‑TCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGAtt < 1:306782/239‑1 (MQ=255)
ccGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTC‑TATCCAGC‑TCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGAtt < 1:197510/239‑1 (MQ=255)
ccGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTC‑TATCCAGC‑TCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGGCATCCGTGGCGACAGAGGGGGTCGCACCGCCGGGGAATGGGGCCCTGAtt > 2:1076945/1‑239 (MQ=255)
ccGTTATTCAGTACCGGGGCGCGATTATCCCGCGTTGGGCGATGCCAGCGTAAACGCAACATATGCAAAAGGCTCGATAAAGTGTTACCCCTC‑TATCAAGC‑TCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGAtt < 1:907417/239‑1 (MQ=255)
cAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGAAAACGCAGCATATGCAAAAGCCTGGATAAAGTGTTACCCCTC‑TATCCAGC‑TCATCCATAAATACCTGATGGTTGTGCTAACTAATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCACACGTGGCTACAGAGGTGGTCGCAGCGGCGGATGATGGGGCCATGATTTGATcccc > 1:485936/1‑238 (MQ=255)
tATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTC‑TATCCAGC‑TCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTCCTGTGCAGGTGGAATATCCGTCCCTTCAGGCTGTACGTCATCCGTGGCCACAGAGGTGGGCGCAACGGCGGGAGAGGGGGCCCCGATTTGATccccaac > 2:864825/1‑235 (MQ=255)
tATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTC‑TATCCAGC‑TCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCTTGGCGACAGAGGTGGTCGCAGCGGCGGCAGATGGGGCCATGATTTTTTCCCAGa > 1:992284/1‑238 (MQ=255)
tATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTC‑TATCCAGC‑TCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCCCAGCGGCGGGAAAAGGGGCGAAAAAGTGATCCCAAAc > 2:338530/1‑239 (MQ=255)
cggcgCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTC‑TATCCAGC‑TCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGCTGGGGCCATGGATTGATCCCCGACCGcc > 1:4819/1‑238 (MQ=255)
cggcgCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTC‑TATCCAGC‑TCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGAAGATGGGGCCATGATTTGATCCCCAACCg > 1:1008451/1‑236 (MQ=255)
cgcgATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTC‑TATCCAGC‑TCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGCACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGAGTGGGCCCGGGTTTTGTCCCACACCGccgcca > 1:824699/1‑235 (MQ=255)
gATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTC‑TATCCAGC‑TCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACg < 1:888250/239‑1 (MQ=255)
tCCCGCGTGAGGCGATGCCAGCGTAACCGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTC‑TATCCAGC‑TCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTc < 1:844869/239‑1 (MQ=255)
cgTGAGGCGATGCCAGCGCAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTC‑TATCCAGC‑TCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGAATATTGGGCCATGATTTGATTCCCGACCCCCTGCAACACTTTCCTGtt > 1:979476/1‑239 (MQ=255)
gTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTC‑TATCCAGC‑TCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCCTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCCTGGTTTGATCCCCAACCGCCCCGCACCCTTTCAAGTTa > 2:545826/1‑239 (MQ=255)
tGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTC‑TATCCAGC‑TCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTTATCCCAGACACCCTCCCACACTTTCATGTTaa > 1:1081586/1‑239 (MQ=255)
cGCAGAATTTGCAAAGGGCTGGATAAAGTTTTCCCCCTC‑TACCCAGC‑TCATCCATAAATCCCTGATGGTTGTGCTAACCCACCACCATCAGGCATTACTGGGCAGGGGGAATACCCGTCACTTCAGGATGTACGTCATCCGTGGCGACGGAGGTGGTCGCGGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGc < 2:1081586/239‑1 (MQ=255)
cGCAACATATGCAAAAGGTTGGATAAAGTGTTACCCCTT‑CATCCGGC‑GCACCCAAAAATGCCTGATGGTTGTGATAACTCATCACCATCGGGCATTACTGTGCAGGGGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGCCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGc < 2:40677/239‑1 (MQ=255)
gaatgtttaaaagagacggggAAAAAGTGTTACCCCTC‑TACCCAGC‑TCATCCAAAAATCCCTGAGGGTTGTGCTAACTCATCCCCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGc < 1:944141/219‑1 (MQ=255)
cagtaTATTAAAAAGGGTGGAAAAAGTTTTCCCCCCC‑CTCCCAGC‑TTACCCATAAATTCCTGATGGTTGTGCAAACCCATCCCCAACAGGCTTTACGGTGCAGTGGAAATACCCGTCCCTTCAGGATGTACGTCACCGGTGGCGACAGGGGTGGCCCCAGTGGCGGTAGATGGGCCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTg < 2:942348/239‑1 (MQ=255)
ctacgCAAAAGGGTTGATAAGTTGTTCCCCCTG‑TACCCCGC‑TCATCAATAAATACCTGATGTGTGTGTTAACTCATCCCCATCGGGCATTTCTGGGCAGGTGGAATACCCGACCCGTAAGGATGTCCGGGATCCTGGGGGAAAGGGGTTGTGGCGCGGGTGGTAGATGGGGCCCTGATTTGACCCCGGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTgcag < 2:979476/234‑1 (MQ=255)
atttGCAAAAGGCTGGATAAAGGGTTCCCCCTC‑TACCCAGG‑TCACCCAAAAATCCCGGATGTTTGTGCTAACTCACCCCCAACAGGCATTACTGGGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGGGGTAAATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTgcagc < 2:732646/236‑1 (MQ=255)
atatGCAAAAGGCTGGATAAAGTGTTACCCCTC‑TATCCAGC‑TCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTgcag < 1:25757/238‑1 (MQ=255)
atatACAAAAGGCTGGAAAAAGTGTTACCCCTC‑TATCCAGG‑TCATCCATAAATCCCTGATGGGTGGGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTgcagc < 1:68634/239‑1 (MQ=255)
atagGCAAAAGGCTGGAAAAAGT‑TTTCCCCTCTTAACCAGT‑TTACCCATAAATCCCGGAGGTTGGTGCTAACTCATCACCATCAGGCATTACTGGGCAGGGGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTgcagc < 2:608688/239‑1 (MQ=255)
tGGATAAAGTGTTACCCCTC‑TATCCAGC‑TCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGGTAAATTCCGGCTCGCCTTTCGGCGTCAGCAGGATTAACGCCa > 1:350355/1‑239 (MQ=255)
tAAAGTTTTTCCCCTC‑T‑TCCCGCGTTAGCCAAAAATCCCTGAGTGTTGTCTTAACTCAACCCCATCGGGCATTCCTGGGCAGGGGGAATTCCCGGCCCTTCGGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCatat < 2:170361/238‑1 (MQ=255)
tttcccccTC‑TATCCACC‑TCATCCAAAAATTCCGGGTGGTTGTGCTAACCCATCACCATCGGGCATTTCTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCCTCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGa < 2:814786/235‑1 (MQ=255)
tACCCCTC‑TATCCAGC‑TCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGGCCTTGTTTTATCCCCAACCGCCTGCAAAGCTTTCATGTTAAATTCCGGCTCGCCTTTTGGCTGCAGCCGGATTAAACGCATATAATTcaaaa > 2:403797/1‑235 (MQ=255)
c‑tATCCAGC‑TCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATTGTTTGATCCCAGACCGGCTGCAACGCCTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCGGCAGAATTAAAGCCATAACATTccgaaacagtgt > 2:901024/1‑228 (MQ=255)
c‑tATCCAGC‑TCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTTATCCCAGACCGCCCGCAACCCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCCGCAGAATTAAAGCCctaaaatttcgcaacctttg > 2:513101/1‑222 (MQ=255)
c‑tATCCAGC‑TCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTTGGCTGCCCCCATATTAACGcccattaatttcaaaacatttt > 2:11302/1‑219 (MQ=255)
cAGC‑TCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCCGCCACGCTTTCCTGTTAAATTCCGGCCCGCCCTTCGGCTGCCCCAGCATTAACGCCACTACATTTGACA‑Accatttacccc > 2:272409/1‑229 (MQ=255)
c‑TCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGGCCGCCTGCAACGCTTTCATTTTAAAATTCGGCCCCCCTTTTGGCTGCAGCAGGATTAAAGCCCTAAAATTCACCA‑ACCCTTGAcagaca > 2:503377/1‑233 (MQ=255)
c‑TCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGGATTAAAGCCATATCATTGGCCA‑ACTGTTGACGCAGa > 1:582509/1‑238 (MQ=255)
ctcccccAAAAATCCCTGGTGGTTGGTCAACCTCATCCCCATGGGTATTTCCTGTGCAGGTGGAATTCCCGCCCCTTCAGGATTTACTACATCCGTGGCGACGGGGGTGGTGGCAGGGGGGGTAGATGGGGCCTGGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGAt < 2:649307/234‑1 (MQ=255)
aTCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCCTGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTTAATTCCGGCTCGCCTTTCGGCTGCAGCCGTATTAACGCCATATCATTCACCA‑AATGTTTACCCAAATc > 1:727560/1‑237 (MQ=255)
aTCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTTATCCCAGACCGCCTGCAACCCTTTCAGTTTAAATTCCGGGCCGCCTTTCGGCTGCCGAAGAATTAAAGCCAAACCATCCCCAA‑AATGTTTACGCAGAAccc > 2:957852/1‑238 (MQ=255)
aTCCATAAATACCTGATGGTTGTGCCAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACCCCATATCATTCTACA‑ACTGTTTACGCGGAt > 1:129428/1‑236 (MQ=255)
ccATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGGTTTGATCCCAGACAGCCTGCAAAGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGAACCAGAATTAACGCCATATAATTCGACA‑ACTGTTGACCCCGATCCGGa > 2:200006/1‑239 (MQ=255)
ccATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCCTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGGCTTAACGCCATATCATTCGACA‑ACCGTTGACGCCGATCCCGa > 2:92415/1‑239 (MQ=255)
aaaaTCCCTGATGGTTGGGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGAttt < 1:1071551/238‑1 (MQ=255)
aattccgtttttttGTGCAAACTCATCCCCCTCGGGCATTACGGTGGGAGGGGAATTCCCGCCCCTTCGGGAGTTGCGTCAACCGTGGGGACAGAGGGGGCCGCCGGGGGGGTAGAGGGGCCCATGGTTGGACCCCATGCCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTaa < 2:12290/227‑1 (MQ=255)
aaTACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCCTGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCACCAGTATTAAACCCAATTCAATCGCCA‑ACCGTTGaaccaaaccccagtttaa > 2:468152/1‑222 (MQ=255)
cTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCCTGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCCCGCCTTTCGGCGTCACCAGGATTAACGCCCTAACATTCGCAC‑ACCGTTGGCCGAGATCCGGGTTTaaaaaa > 2:1071551/1‑234 (MQ=255)
cTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATTTTAAATTCCGGCTCGCCTTTCGGCTGCCGCAGGATTAAAGCCATATCATTCGCCA‑ACTGTTGTCCCCGATCCTGATTTAACaac > 2:1067306/1‑236 (MQ=255)
tGATGGTTGTGCTAACTCATCACCATCGGGCATTACTGTGCAGGTGGAATAGCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGACCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACAtctc < 1:338530/239‑1 (MQ=255)
gagggTTGTGCTACCCTATCACCATCAGGCATTACTGTACAGGTGGAATACCCGTCCCTTCAGGATGTACGTCCTCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATctct < 1:403797/236‑1 (MQ=255)
gATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCGGCAGACTTTACGCCATATCATTTGACA‑ACTGTTGTCGCAGATCCCGATTTAAAAttcc > 1:439728/1‑235 (MQ=255)
aTGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATctct > 1:647136/1‑238 (MQ=255)
tgccTAACCCATCCCCTTTAGGCATTACTGGGCAGGGGGAATACCCGGCCCTTCAGGATGTCCGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCa < 1:513101/236‑1 (MQ=255)
gtgCCAACACACCACCATCGGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGGGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGGCCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCa < 1:210074/239‑1 (MQ=255)
ggtcaaaCTCACCCCCAACGGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTCCGTCATCCGTGGCGACGGAGGTGGTCGCAGGGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCa < 1:1076945/234‑1 (MQ=255)
gggCTAACTCATCCCCATCAGGCATTACGGTGCAGGTGGAATATCCGTCCCTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCa < 1:11302/237‑1 (MQ=255)
tgCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAg > 1:188661/1‑239 (MQ=255)
tgCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCCCGCCTTTCGGCCGCAGCAGGATTAACGCCATATCATTCGCCA‑ACTGTTGCCGCAGATCCTGATTTaaacacttacccgtccg > 1:62555/1‑224 (MQ=255)
tgCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGGAGATTGGGCCAAGGTTTGATCCCAGACCGCCTGCAACGCTTTCCTGGTAAATTGCGGCTCCCCTTTCGCCCGCAGCAGTATTAACGCCATCTCATTCGAAC‑ACTGTTGAACCCAATCATCAATTAACAACCCTAccagcag > 2:347618/1‑234 (MQ=255)
tcatcaCCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTTCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCgg > 1:254445/1‑160 (MQ=255)
ccccATCGGGCATTACTGGGCAGGTGGAATCTCCGTCCCTTCAGGATGTACGTCATCCGTGGCGACAGGGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTAAGGa < 1:92415/237‑1 (MQ=255)
caCCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCCGACCGCCTGCAACGCTTTCATGGTAAATTCCGGCTCGCCTTTCGGCTGCAGCCGGATTAACGCCTAATCATTCGCCA‑ACTGTTGACGCCGATCCTGATTTAACATCTCTACCGTCAGGCTTTTAAGGa > 1:133567/1‑239 (MQ=255)
ccccctgtttttACTTTGAAGGTGGAATACCCGTCACTTAAGGATGTCCGTCACCCGGGGCGACAGAGGTGGCAGCAGGGGCGGTAGAGGGGGCCATGTTTTGACCCCGGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTAAGGaaa < 2:377508/229‑1 (MQ=255)
ccATCGGGCATTACTGTGCAGGTGGAATACCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGGGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCTGCAGTATTAACGCCATATCa < 1:977520/179‑1 (MQ=255)
ttcaCTGTGCAGGCGGAATTTCCGTCACGTCAGGGTGGTCCGCACCCGGGGCGACAGAGGTGGTCGCAGGGGGGGTAGATGGGGCCATGATTTGACCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTAAGGAAATCCTGCCg < 1:497737/235‑1 (MQ=255)
tttggtggcggggggtatacCCGTCACTTCGGGATGTCGGTCATCCGTGGGCACAGGGGGGGCCGCAGGGGCGGTAGATGGGGCCATGATTTGACCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTAAGGAAATCCTGCCGCa < 2:765063/223‑1 (MQ=255)
ttACTGGGCAGGTGGAATACCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGGGGTGGCCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTAAGGAAATCCTGCCGCa < 1:272409/239‑1 (MQ=255)
tACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGGTTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATCCCTACCGTCAGGCCATTAAGGAAATCCTGCCGCAg > 1:805603/1‑239 (MQ=255)
gtgCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGGAGATGGGGCCATTATTTGATCCCAGACCGCCTGCAACGCCTTCATGTTAAATTTCGGCTCGCCTTTCGGCTGCAACCGTATTTACGCCCTTTCCATCCACA‑ACTGTTGACGCCGCTCCTCTTTTAAAATCCATACCTCCAGGCCTTTAAGGAAATCAGGCCCCCGtttt > 2:825847/1‑238 (MQ=255)
gCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATCCATACCGTCAGGCTATTAAGGAAATCCTTCCGCCGTTTCTg > 1:872140/1‑239 (MQ=255)
cAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCCTGGTTTGTTCCCAGACCGCCTGAAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATTTCATTCGCCA‑AATGTTTACGCAGAGCCTGATTTTAAACCTCTACCGTCAGGCCTTTTAGGAAAACATCCCCCAGTTTCTGa > 2:942373/1‑239 (MQ=255)
gggaaaTACCCGTCCCTTCGGGATGTACGTCACCCGGGGCGACAGGGGTGGTCGCAGGGGGGGTAGATGGGGCCATGATTGGACCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTAAGGAAATCCTGCCGCAGTTTCTGata < 1:901024/234‑1 (MQ=255)
gTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGGTTTTATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCCCCTTTCGGCCGCAGCAGTATTAACGCCAAATACTTCGACA‑ACCTTTTACGCCGATCCTGATTTTACACCCCTACCGTCCGGCTATTAAGGAAAACCTTCCCCCGTTTTTTatat > 2:844042/1‑239 (MQ=255)
gTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATAATTCGACACCCTTGTGA‑GCAGATCCTGATTTTACACCCCCACCGCCAGGCCATTAAAGAAAACCTGCCGCAGTTTTTGaaat > 2:62882/1‑239 (MQ=255)
gTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGAATTTATCCCAGACCGCCTTCAAAGCCTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGGTTTAACGCCATATCATTCTGCA‑AATGTTGCACCACAACCCGGTTTAAAACCTCCTCCCTCAGGGCATTTAGGAAAAACCTCCGCAGttttttgtaa > 2:1012196/1‑232 (MQ=255)
gAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGCTTTAACATCTCTACCGTCAGGCTATTAAGGAAATCCTGCCGCAGTTTCtagaattt > 1:152312/1‑231 (MQ=255)
gTCCCTTCAGGATGTACGTCATCGGTGGCGACAGAGGGGGCCGCGGCGGCGGTAGATGGGGCCATGATTTGACCCCAAACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTAAGGAAATCCTGCCGCAGTTTCTGATATTGCTCCGgcg‑c < 1:1005115/239‑1 (MQ=255)
gTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTCTTAAGGAAATCCTGCCGCAGGTTCTGATATTGCCCCGggg‑c > 1:3407/1‑239 (MQ=255)
tCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAAATGGGGCCATGATTTGTTCCCAGACCCCCTGCAACGCTTTCATGTTAAATTTCGGCTCCCCTTTCGGCTGCAGCACTATTAACGCCTTATCCTTCGACC‑CATGTTTACCCGGATCCCAATTTTACCTCTCTACCCTCAGGCTATTTAGAAAAACCTCCCGCCATTTCTTATAttttccccggggg > 2:309861/1‑228 (MQ=255)
aCGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTTATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGTCCCGGGTCCTGGTTTAAAAACTCTACCCTCAGGGTATTAAAGAAAACCCGCCCACGTTTCTGAAATTTCCCCCGGG‑CGGTATCGCAAACCta > 2:369075/1‑238 (MQ=255)
aCGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTAAGGAAATCCTGCCGCCGTTTCTGATATTGCTCCGGCG‑CCATATCGACaa > 1:950898/1‑235 (MQ=255)
aCGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTAAGGAAATCCTGCCGCAGTTTCTGTAATTGTTCCGGGC‑CGATATCGCCAAccgg > 1:189411/1‑237 (MQ=255)
aTCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGGTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTTACGCCGATCCCGATTTAACATCTCTACCGTCAGGCTATTAAGGAAATCCTGCCGCAGTTTCTGATATTTCTCCGGCG‑CGATATCGACAAACTGAtttt > 2:1078306/1‑239 (MQ=255)
gTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑Ac < 2:464605/132‑1 (MQ=255)
gTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑Ac > 1:464605/1‑132 (MQ=255)
tggtCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTCACGCCATATCCTTCGACA‑ACCGTTTACGCAGATCCTGATTTAAAATCTCTACCTCTAGGCTATTTAGGAAAGTCTGCCGCAGGTTTTGTTATTGCCCCGGGC‑CGCTATTAACAACCTCCtttttgaacaaaaccctacgc > 2:615820/1‑222 (MQ=255)
ggcggaggggggggaggtGGGGCCATGTTTTCACCCCAGACCGCCTGAAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTAAGGAAATCCTGCCGCAGTTTCTGATATTGCTCCGGCG‑CGATATCGACAACCTGATTTTGCAACGAACGCATCCGCt < 2:647136/221‑1 (MQ=255)
cgcggcgggggtgagtGGGGCCTGGTTTTTACCCCAGACCGCTTGCAAAGTTTTCATGTTAAATTCCGGCTCGCCTTGAGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTAAGGAAATCCTGCCGCAGTTTCTGATATTGCTCCGGCG‑CGATATCGACAACCTGATTTTGCAACGAACGCATCCGCTGa < 2:992284/223‑1 (MQ=255)
ccgggggggggtgatgggggCCTTGGTTGGCCCCCGGGCCGGCTGCAACGTTTTAATTTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTAAGGAAATCCTGCCGCAGTTTCTGATATTGCTCCGGCG‑CGATATCGACAACCTGATTTTGCAACGAACGCATCCGCTGa < 2:129428/222‑1 (MQ=255)
cGCAGGGGCGGTAGATGGGGCCATGATTGGACCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTAAGGAAATCCTGCCGCAGTTTCTGATATTGCTCCGGCG‑CGATATCGACAACCTGATTTTGCAACGAACGCATCCGCTGa < 1:1067306/238‑1 (MQ=255)
aGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACCCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGGATTAACGCCCTATCATTCGACA‑ACTGTTGACGCCGATCCTGATTTAACATCTCTACCGTCAGGCTATTAAGGAAAACCTGCCGCCGTTTTTGATATTTGTCCGGCGCCGAT‑TCGCCAACCTGATTTTGCCACAAACACAACCGCTGcccc > 2:553049/1‑238 (MQ=255)
gcggcgGTAGATGGGGCCATGATTTGACCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTAAGGAAATCCTGCCGCAGTTTCTGATATTGCTCCGGCG‑CGATATCGACAACCTGATTTTGCAACGAACGCATCCGCTGACCCAt < 1:957852/239‑1 (MQ=255)
cggcggTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCGACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCCGCAGCAGTATTAACGCCATAACATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTAAGGAAATCCTGCCCCCGTTTCTGCTATTGCTCCGGCG‑CGCTATCGGACACCCGATTTTTCACAGAACCCATACGCCCAccccac > 2:404649/1‑236 (MQ=255)
ggTAGATGGGGCCATGATTTGACCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTAAGGAAATCCTGCCGCAGTTTCTGATATTGCTCCGGCG‑CGATATCGACAACCTGATTTTGCAACGAACGCATCCGCTGACCCATCAGa < 1:200006/238‑1 (MQ=255)
aGATGGGGCCTTGATTTGACCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTAAGGAAATCCTGCCGCAGTTTCTGATATTGCTCCGGCG‑CGATATCGACAACCTGATTTTGCAACGAACGCATCCGCTGACCCATCAGAatat < 1:403142/239‑1 (MQ=255)
ggCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTAAGGAAATCCTGCCGCAGTTTCTGATATTGCt > 1:632433/1‑173 (MQ=255)
ggCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTAAGGAAATCCTGCCGCAGTTTCTGATATTGCTCCGGCG‑CGATATCGACAACCTGATTTTGCAACGAACCCATCCGCTGACCCCTCAGAATATCGGTAt > 1:689686/1‑239 (MQ=255)
ctaTGATTTGATCCCAGACCGCCTGAAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTAAGGAAATCCTGCCGCAGTTTCTGATATTGCTCCGGCG‑CGATATCGACAACCTGATTTTGCAACGAACGCATCCGCTGACCCATCAGAATATCGGTATc < 1:754740/236‑1 (MQ=255)
cATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTAAGGAAATCCTGCCGCAGTTTCTGATATTGCTCCGGCG‑CGATATCGACAACCTGATTTTGCAACGAACGCATCCGCTGACCCATCAGAATATCGGTATCa > 1:700570/1‑238 (MQ=255)
aTGTTTTGACCCAAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTAAGGAAATCCTGCCGCAGTTTCTGATATTGCTCCGGCG‑CGATATCGACAACCTGATTTTGCAACGAACGCATCCGCTGACCCATCAGAATATCGGTATCAGc < 1:864825/239‑1 (MQ=255)
tGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTAAGGAAATCCTGCCGCAGTTTCTGATATTGCTCCGGCG‑CGATATCGACAACCTGATTTTGCAACGAACGCATCCGCTGACCCATCAGAAAATCGGGATCAGc > 1:246543/1‑238 (MQ=255)
gATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTAAGGAAATCCTGCCGCAGTTTCTGATATTGCTCCGGCG‑CGATATCGACAACCTGATTTTGCAACGAACGCATCCGCTGGCCCATCAGAATATCGGTATCAGccc > 1:797042/1‑237 (MQ=255)
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CCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTC‑TATCCAGC‑TCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA‑ACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTAAGGAAATCCTGCCGCAGTTTCTGATATTGCTCCGGCG‑CGATATCGACAACCTGATTTTGCAACGAACGCATCCGCTGACCCATCAGAATATCGGTATCAGCTC > NC_000913/3680295‑3680768
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
