Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F9 I0 R1 260 102.5 2178490 93.2% 2030352 226.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,873,621 T→C 11.3% S285G (AGC→GGC)  dgoK ← 2‑oxo‑3‑deoxygalactonate kinase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,873,6210TC11.3% 301.8 / 2.3 127S285G (AGC→GGC) dgoK2‑oxo‑3‑deoxygalactonate kinase
Reads supporting (aligned to +/- strand):  ref base T (65/43);  new base C (9/8);  total (75/52)
Fisher's exact test for biased strand distribution p-value = 6.03e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 128 total aligned reads displayed.

GAGCGCATCGACCTGTTCAGGTTTCAGTACCGTACCTGCGCCAATCAACGCCTTGTCGCCGTACGCATCAACGATGGCGGGAATGCTTTGCTCCCATTGTGGGGAATTCAGCGGGATTTCAACCGCGTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTCCCAGCAC‑ATGCGAGGCGCGAACT  >  NC_000913/3873384‑3873856
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                            
   cgcATCGACCTGTTCAGGTTTCAGTACCGTACCTGCGCCAATCAACGCCTTGTCGCCGTACGCATCAACGATGGCGGGAATGCTTTGCTCCCATTGTGGGGAATTCAGCGGGATTTCAACCGCGTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCCAAATGGCGA‑TCCGCGGGGGTTTAGTTTGCCCCTGCAGGAGGGAGGGTCCtt                                                                                                                                                                                                                                          >  1:189681/1‑239 (MQ=255)
   cgcATCGACCTGTTCAGGTTTCAGTACCGTACCTGCGCCAATCAACGCCTTGTCGCCGTACGCATCAACGATGGCGGGAATGCTTTGCTCCCATTGTGGGGAATTCAGCGGGATTTCAACCGCGTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCtt                                                                                                                                                                                                                                          >  1:939061/1‑239 (MQ=255)
   cgcATCGACCTGTTCAGGTTTCAGTACCGTACCTGCGCCAATCAACGCCTTGTCGCCGTACGCATCAACGATGGCGGGAATGCTTTGCTCCCATTGTGGGGAATTCAGCGGGATTTCAACCGCGTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCCCAAAATGGCGA‑TCAGCGGGGGTTTAGTTTGCCACTGCCTGAGCGATGCTCCtt                                                                                                                                                                                                                                          >  1:686796/1‑239 (MQ=255)
         gACCTGGTCAGGTTTCAGTTCCGTTCCTGCGCCAATCAACGCCTTGTCGCCGTACGCATCAACGATGGCGGGAATGCTTTGCTCCCATTGTGGGGAATTCAGCGGGATTTCAACCGCGTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCa                                                                                                                                                                                                                                    <  1:329386/239‑1 (MQ=255)
         ctccTGTTCAGGGTTCAGTGCCGTTCCTGGCCCAATACACGCCTTGGCGCCGGCCGCATCAAGGATGGCGGGAATGCTTTGCTCCCATTGTGGGGAATTCAGCGGGATTTCAACCGCGTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCa                                                                                                                                                                                                                                    <  2:649680/237‑1 (MQ=255)
           ccTGTTCCGGTTTCAGTTCCGTACCTGCGCCCATCAACGCGTTGGCGCCGTACGCAACAACGAGGGCGGGCATGCTTTGCTCCCATTGGGGGGAATTCAGCGGGATTTCAACCGCGTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGc                                                                                                                                                                                                                                  <  2:1029929/239‑1 (MQ=255)
           ccTGTTCAGGTTTCACTACCGTACCTGCGCCAACCAACGCCTTGGCGCCGTACGCATCAACGATGGCGGGAATGCTTTGCTCCCATTGTGGGGAATTCAGCGGGATTTCAACCGCGTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGc                                                                                                                                                                                                                                  <  1:337384/239‑1 (MQ=255)
                       tCAGTACCGTACCTGCGCCAATCAACGCCTTGTCGCCGTACGCATCAACGATGGCGGGAATGCTTTGCTCCCATTGTGGGGAATTCAGCGGGATTTCAACCGCGTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACCT‑GCG‑CCAGCGCCTCGTCCGGCGGAATACCCCCCAAAATGGGGA‑TCCGCGGGAGGTTCGGTGGCCACCCCAGGGGCGAGGCCCCCTATAACAGCCCGAAAtacagg                                                                                                                                                                                                                      >  2:954137/1‑234 (MQ=255)
                         aGTACCGTACCTGCGCCAATCAACGCCTTGTCGCCGTACGCATCAACGATGGCGGGAATGCTTTGCTCCCATTGTGGGGAATTCAGCGGGATTTCAACCGCGTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCgtg                                                                                                                                                                                                                     >  1:688531/1‑238 (MQ=255)
                              cgtaccTGCGCCAATCAACGCCTTGTCGCCGTACGCATCAACGATGGCGGGAATGCTTTGCTCCCATTGTGGGGAATTCAGCGGGATTTCAACCGCGTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGACCGATGCTCCTTATACCACCCTGAAATGCCGTGCcgccc                                                                                                                                                                                                               >  1:653526/1‑239 (MQ=255)
                              cgtaccTGCGCCAATCAACGCCTTGTCGCCGTACGCATCAACGATGGCGGGAATGCTTTGCTCCCATTGTGGGGAATTCAGCGGGATTTCAACCGCGTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGGTTAGTTTGCCCCTGCATGAGCGATGCTCCTTTTACCAGCCTTAAATCCCgtgcggcc                                                                                                                                                                                                                >  1:81154/1‑233 (MQ=255)
                                taccTGGCCCAATCAACGCCTTGTCGCCGTACGCATCAACGATGGCGGGAATGCTTTGCTCCCATTGTGGGGAATTCAGCGGGATTTCAACCGCGTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATAc                                                                                                                                                                                                                                      <  1:654416/214‑1 (MQ=255)
                                taccTGCGCCAATCAACGCCTTGTCGCCGTACGCATCAACGATGGCGGGAATGCTTTGCTCCCATTGTGGGGAATTCAGCGGGATTTCAACCGCGTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTCATACCGCGCAAAATGGCGA‑TCAGCGGGGGTTTAGTTTGCCCCTGCACGCGCGATGCTCCTTTTACCAACCTGAAATTcccgttcccccg                                                                                                                                                                                                              >  2:879450/1‑228 (MQ=255)
                                taccTGCGCCAATCAACGCCTTGTCGCCGTACGCATCAACGATGGCGGGAATGCTTTGCTCCCATTGTGGGGAATTCAGCGGGATTTCAACCGCGTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGAGGCTCCTTATACCAACCTGAAATGCCGGGTcgcccg                                                                                                                                                                                                              >  1:869342/1‑238 (MQ=255)
                                taccTGCGCCAATCAACGCCTTGTCGCCGTACGCATCAACGATGGCGGGAATGCTTTGCTCCCATTGTGGGGAATTCAGCGGGATTTCAACCGCGTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑CCAGCGGGAGTTTAGTTTGCCACTGCCTGACCGCTGCTCCTTATTCCCGCCTGAAATGCCGGGTcgcccg                                                                                                                                                                                                              >  1:991161/1‑238 (MQ=255)
                                  ccTGCGCCAATCAACGCCTTGTCGCCGTACGCATCAACGATGGCGGGAATGCTTTGCTCCCATTGTGGGGAATTCAGCGGGATTTCAACCGCGTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTcgcccgcc                                                                                                                                                                                                            >  1:714404/1‑238 (MQ=255)
                                   cTGCGCCAATCAACGCCTTGTCGCCGTACGCATCAACGATGGCGGGAATGCTTTGCTCCCATTGTGGGGAATTCAGCGGGATTTCAACCGCGTCGAA‑CCCGGC‑GTCAATCACCGCCCCAACAT‑GCG‑CCAGCGCCCCGCCGGGCGTAAAACCCCCCAAAATGGCGA‑TCCGCGGGAGTTTCTTTTTCCCCTGCATGGGCGAGGCCCCTTTAACCACCCCGAAATGCCGGGGcgcccgccc                                                                                                                                                                                                           >  2:603257/1‑237 (MQ=255)
                                     ggcccaaataaCGCCTTGGCCCCGTGCCGATCAACGATGGCGGGAAGTCTTTGCCCCCATTGGGGGGAATTCAGCGGGATTTCAACCGCGTCGAA‑CCCGGC‑GTCAATCCCCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTATTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCAccg                                                                                                                                                                                                        <  2:81154/230‑1 (MQ=255)
                                     gcgcCAATCAACGCCTTGTCGCCGTACGCATCAACGATGGCGGGAATGCTTTGCTCCCATTGTGGGGAATTCAGCGGGATTTCAACCGCGTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCCCGCAAAATGGCGA‑TCAGCGGGAGGTTAGTTTGCCCCTGCACGGGCGATGCCCCTTATAACAACCCGAAAAGCCGGGGCCCCCGCCAcc                                                                                                                                                                                                         >  2:1007631/1‑238 (MQ=255)
                                     gcgcCAATCAACGCCTTGTCGCCGTACGCATCAACGATGGCGGGAATGCTTTGCTCCCATTGTGGGGAATTCAACGGGATTTCAACCCCGTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCCCGTCGGGCGTAATACCGCGCGAAATGGCGA‑TCAGCGGGGGTTTCGGTTGCCACGGCATGAGCGGTGCCCCTTTAACCCGCCTGAAAAGCCGTGTcgcccacacac                                                                                                                                                                                                         >  2:922384/1‑232 (MQ=255)
                                          aaTCAACGCCTTGTCGCCGTACGCATCAACGATGGCGGGAATGCTTTGCTCCCATTGTGGGGAATTCAGCGGGATTTCAACCGCGTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCC‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGGGGTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAAAGCCGTTTCGGCCGCCAccgccga                                                                                                                                                                                                    >  1:772156/1‑237 (MQ=255)
                                            tCAACGCCTTGTCGCCGTACGCATCAACGATGGCGGGAATGCTTTGCTCCCATTGTGGGGCATTCAGCGGGATTTCAACCGCGTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACCT‑GCG‑CCCGAGCCTCGTCGGGCGCAATACCACGCAAAATCGCGA‑TCAGCGGGGGCTTAGTTTGCCACTGCGTGCGCGAGGTCCCTTTAACCAGCCCGAAAAGCGgtgagtccgccccccccgcccaa                                                                                                                                                                                                 >  2:202015/1‑219 (MQ=255)
                                                ccccttcgcGCCGGGCGCATCGACGTGGGGGGGAATGCTTTTCCCCCTTTGGGGGGAATTCGCCGGGATTCCACCCGCGCCGAC‑CCCGGC‑GTCAATCCCCCCGCCAACAG‑GCG‑CCAGCGCCGTGGCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCg                                                                                                                                                                                             <  2:151640/231‑1 (MQ=255)
                                                          ccGTACGCATCAACGATGGCGGGAATGCTTTGCTCCCATTGTGGGGAATTCAGCGGGATTTCAACCGCGTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGGGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATc                                                                                                                                                                                    >  1:758967/1‑238 (MQ=255)
                                                             tACGCATCAACGATGGCGGGAATGCTTTGCTCCCATTGTGGGGAATTCAGCGGGATTTCAACCGCGTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCCCCGTCCCGTCGCAACCCCTCg                                                                                                                                                                                   >  1:564419/1‑236 (MQ=255)
                                                             tACGCATCAACGATGGCGGGAATGCTTTGCTCCCATTGTGGGGAATTCAGCGGGATTTCAACCGCGTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCCCCGTCACGTCGCAAccctacccct                                                                                                                                                                                >  1:857537/1‑232 (MQ=255)
                                                                 caacacagggggggggAATTTTTTCCCCCCTTTGGGGGAATTTCAGCGGGTTTACACCCGGGTCGAC‑CCCGGC‑GTCAACCCCCGCGCCAACAG‑GCG‑CCGGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGaaa                                                                                                                                                                            <  2:785195/226‑1 (MQ=255)
                                                                  ataaaCGATGGCGGGAATGCTTTGCTCCCATTGTGGGGAATTCGGCGGGATTTCACCCGCGTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAG‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGaaa                                                                                                                                                                            <  1:477223/235‑1 (MQ=255)
                                                                  aTCAACGGTGGCGGGAATGCTTTGCTCCCATTGGGGGGAATTCAGGGGGATTTCAACCGCGTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGaaa                                                                                                                                                                            <  1:208483/238‑1 (MQ=255)
                                                                   ccaccggtggtggGAATCGTTTGCTCCCATTGTGGGCATTCCAGGGGGATTTCAGCGCGGCCGAC‑CCCGGC‑GGCAACCACCGCGCAAGCAT‑CCG‑CCCGGGTCTCGTCGGGCGTAATCCCGCGCAAAAGGGCTA‑TCAGCGGGAGTTTGGTTTGCCCCTGCAAGAGCGATGCTCCTTATACCAGCTTGAAATGCCGTGGCGCCCGCCTCCGCCGTCACGTCGCAACCCATCGCCTGAAAgg                                                                                                                                                                          <  2:189681/232‑1 (MQ=255)
                                                                            gCGGGAATGCTTTGCTCCCATTGTGGGGAATTCAGCGGGATTTCAACCGCGTCGAG‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCTTCCCGTCGCAACCCATCGCCTGACAAGCTTGCTGGt                                                                                                                                                                 >  1:579638/1‑239 (MQ=255)
                                                                            gCGGGAATGCTTTGCTCCCATTGTGGGGAATTCAGCGGGATTTCAACCGCGTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCGGAAAGGCTTGCTGGt                                                                                                                                                                 >  1:97357/1‑239 (MQ=255)
                                                                             ggggAATGCTTTGCCCCCATTGGGGGGAATCCAGCGGGTTTTCAACCGCGGCGAC‑CCGGGC‑GCAAATCCCCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATCCCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAgg                                                                                                                                                                          <  2:605233/228‑1 (MQ=255)
                                                                                  ttGCTTTCCCCCCCTTGTGGGGATTCCAGCGGGTTTTCACCCGCGCCGAA‑CCCGGC‑GTCAATCCCCGCGCAAACAT‑GCG‑CCGGCGCCTCGTCGGGCTTAATCCCGCGCAAATTGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAgcgcg                                                                                                                                                           <  2:398721/238‑1 (MQ=255)
                                                                                   gtcTTTGCCTCCTTTGTGGGAATTTCGGC‑GGTTTTCCACCCCGCCGAACCCCGGG‑GTAAAGCACCGCCCCAACGG‑GCG‑CAGGCGCCTGGTGGGGCGTAATCCCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAAGGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAgcgcg                                                                                                                                                           <  2:350840/236‑1 (MQ=255)
                                                                                      tttGCTCCCTTTGGGGGGAATCCAGCGGGTTTTCAACCGGGGCCAC‑CCCGGC‑GTCAACCCCCGCGGCAACAG‑GCG‑CCAGCGCCTCGGCGGGCGTAATCCCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAAGGCCGTGCCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGt                                                                                                                                                       <  2:564419/239‑1 (MQ=255)
                                                                                      tttGCCCCCGTGGGGGGGAGTTCGGGGGGA‑TTCAACCGGGGCGGA‑CCCGGCGGTCAGCCCCCGCG‑CAAGATGGCG‑CCATCGCCTCGCCGGGGTTAATACCGGGCAAAATGGCGA‑GCAGCGGGAGTTTAGTTTGCCATGGCAGGGGCGATGCTCCTTATGCCAGCCGGAATGGCGGGGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGt                                                                                                                                                       <  2:318180/239‑1 (MQ=255)
                                                                                       ttGCTCCCATTGTGGGGAATTCAACGGGATTTCAACCGCGTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCCCCCCCGTCACGTCGCAACCCATCGCCTTAAAGGCTTGCTggga                                                                                                                                                                >  1:605233/1‑227 (MQ=255)
                                                                                          cTCCCATTGTGGGGAATTCAGCGGGATTTCAACCGCGTCGAA‑CACGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGACGGGCGTAATACCGCGCAAAAGGGCGA‑TCAGCGGGGGTTTAGTTTGCAACTGCATGAGCGAAGCTGCTTATACAAGCCGGAAATGCAGTGTCCCCCGCCCCCCACGCCCCGCACCAACCCATCGACTGAAAGGCTTGCTGGGAGCGCGGGGCCAgg                                                                                                                                                   >  2:915542/1‑238 (MQ=255)
                                                                                               aTTGTGGGGAATTCAGCGGGATTTCAACCGCGTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTACCCCGCGGTCAACGagg                                                                                                                                               >  1:896705/1‑236 (MQ=255)
                                                                                                tgttgGGGATTTCAGGGGGTTTTACCCCGGGTCGAC‑CCGGGC‑GTCAACCCCCGCGCCAACAG‑GCC‑CCAGCGCCTCGGCGGGCGTAACCCCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATCCCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGtt                                                                                                                                             <  2:714404/236‑1 (MQ=255)
                                                                                                  ggggggTATTCCGCGGGTTCTCACCCGCGTCGCA‑CCCGGC‑GTCTAGCCCCGCGCCAACTT‑GCC‑CCAGCGCCTCGTCGGGCGTAATCCCGCGCAAAATGCCGT‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATCCCAGCCTGAAAGGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTcc                                                                                                                                           <  2:9611/237‑1 (MQ=255)
                                                                                                    ggggAATTCAGCGGGATTTCAACCGCGTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCg                                                                                                                                          >  1:625809/1‑238 (MQ=255)
                                                                                                     gggAATTCAGCGGGATTTCAACCGCGTCGCA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATAGCCTGAAAAGCTTGCTCGTACCGCCCGGCAACCGAGGTTCCGGc                                                                                                                                        >  1:751702/1‑239 (MQ=255)
                                                                                                       gAATTCAGCGGGATTTCAACCGCGTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCCCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGAGGTTCCGGCg                                                                                                                                       >  1:555109/1‑238 (MQ=255)
                                                                                                          ttCAGGGGGATTTCAACCGCGTCGAA‑CCCGGC‑GTCAATCCCCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAAAACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACaa                                                                                                                                   <  1:574833/239‑1 (MQ=255)
                                                                                                          ttCAGCGGGATTTCAACCGCGTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCCCGTCCCAACCCATCCCCTGAACAGCTCGCTGGTAGCGCGCGGCCAGCGATGTTCCGGCGGCaa                                                                                                                                   >  1:1019709/1‑239 (MQ=255)
                                                                                                               ggggTTTTCAACCGCCGGGCA‑CCCGG‑‑GGCAAACCCCCCGGCAACAC‑GCGCCCGGGGCCTTGTGGGGCGTAAGACCGGGAAAAATGGCGA‑TCAGGGGGAGTGTAGTTGGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTg                                                                                                                              <  2:451452/238‑1 (MQ=255)
                                                                                                                    tttCACCCGGGTCGAC‑CCCGGC‑GTCAATCCCCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATCCCGCGCAAAAGGGCGA‑TCAGGGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATgg                                                                                                                          <  1:271898/238‑1 (MQ=255)
                                                                                                                     tccAACCGCGTCAAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCg                                                                                                                        <  1:721535/237‑1 (MQ=255)
                                                                                                                            gcgTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGCAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCCCGGTCCGCGATGTTCCGGCGACAAGGGGGATGGCGGGTTGAt                                                                                                                 >  2:292817/1‑239 (MQ=255)
                                                                                                                            gcgTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGCGGCCAAGGGGGATGGGGGGTTGAt                                                                                                                 >  1:87918/1‑239 (MQ=255)
                                                                                                                            gcgTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGGGTCGCCCGCCACCGCCGTCCCGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCACCGATGTTCCGGCGACAAGGGGGATGGCGTGTGGAt                                                                                                                 >  1:470737/1‑239 (MQ=255)
                                                                                                                             ggTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTAGGGCGTAATCCCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTGGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATg                                                                                                                <  1:935096/238‑1 (MQ=255)
                                                                                                                             cgccGAA‑CCCGGC‑GTAAACCCCGGCGCAAAAGT‑GCG‑CCAGCGCCGCGTGGGGCGAAATCCCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACGGCATGAGCGATGCCCCTTATACCAGCCGGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATg                                                                                                                <  2:816941/236‑1 (MQ=255)
                                                                                                                             cgTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTTAAAGGCTTGCTGGTAGCGCGCGGTCAGCGAGGTTCCGGCGACAAGGGGGAAggggggtgtagg                                                                                                                >  2:897842/1‑229 (MQ=255)
                                                                                                                             cgTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCCCCCGGTCAGCGATGTTCCGGCGACCAGGGGGATGGCGGGTTGATg                                                                                                                >  1:816941/1‑239 (MQ=255)
                                                                                                                             cgTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATAGCGC‑TCAGCGGGAGTTTAGTTTGCCACTGCATGCGCGATGCTCCTTATACCCGCCTGCAGTGCCGTGACGCCCGCCACCGCCGTCACGCCCCAACCCATCGCCTGAAAGGTCTGCTGGCAGCGCCGGGTCACGAATTGTCCGCCCCCAAGGGTGGTAGCgtgggtaag                                                                                                                >  2:408691/1‑233 (MQ=255)
                                                                                                                             cgTCGAA‑CCCGGC‑GTCAACCCCCGCGCCAACAT‑GCG‑CCAGCGCCTCGCCGGGCGTAATCCCGCGCAAAAGGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATg                                                                                                                <  1:603257/239‑1 (MQ=255)
                                                                                                                                cGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGGGTAATCCCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATggg                                                                                                              <  1:868414/238‑1 (MQ=255)
                                                                                                                                      ccggggcgacctcccgtgcccAACCT‑GCC‑CCAGGCCCTGGGCGGGCTAAAACCCGCGC‑AAATGGGGATTCGAGGGGGGTTTAGTTTGCCACGGCATGGGCGATGCCCCTTAACCCAGCCTGAAAGGCCGTGTCGCCCGCCCCCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCcaca                                                                                                         <  2:61530/220‑1 (MQ=255)
                                                                                                                                          c‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGCGATGGCGTGTTGATGGGCCACATAGTc                                                                                                    >  1:180407/1‑239 (MQ=255)
                                                                                                                                                aTCCCCGCGCCAACGT‑GCG‑CCAGGGCCTCGGCGGGCGTAATACCGCGCAAAATGGCAA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCa                                                                                               <  1:1007631/239‑1 (MQ=255)
                                                                                                                                                aTCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGCCAAGGGTGATGGCGTGTTGATGGGCCACCTAGTCgcgc                                                                                                >  1:185818/1‑238 (MQ=255)
                                                                                                                                                       cgcCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCTCGCCACCGCCGCCACGTCGCAACCCTTCGCCTGCAAGGCTTGCTGGTAGCGCCCGGTCCGCCAGGTTTCCGGGCCCAGGGTGGAGGCGGGGTGAGGGGCcaccacacgccgcacacaggc                                                                                        >  2:85519/1‑221 (MQ=255)
                                                                                                                                                       cgcCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCCCCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGGGATGGCGTGTTGATGGGCCCCAAAGCGgcgcgaacgggg                                                                                        >  2:1003262/1‑231 (MQ=255)
                                                                                                                                                               t‑GCG‑CCAGCGCCTCGGCGGGCGTAATCCCGGGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTg                                                                                <  1:262166/239‑1 (MQ=255)
                                                                                                                                                                  cg‑cCAGGGCCTCGTCGGGCGTAATACCGCGAAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCCCCTTACACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTg                                                                                <  1:893892/237‑1 (MQ=255)
                                                                                                                                                                  cg‑cCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAAACCATCGCCTGAAAGGCTTGCTGGTAGCCCGCGGCCAGCGATGTTCCGGCGAAACGGGGGTGGGCGGGTTGAGGGGCCACAAAgcccgcccaacgggggccccccgc                                                                               >  2:576303/1‑215 (MQ=255)
                                                                                                                                                                     ccAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCGGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGCCGTCCGTGTAGCGCGCGGGCAGCGATGTTCCAGGGACAAGGGGGGTGGCGGGTTGATGGTCCACCGAGTCgcgccacctcgccgacctttgggc                                                                            >  2:125971/1‑219 (MQ=255)
                                                                                                                                                                                  gggtcttattccgccaaatggggCGC‑TCGGCGGGAGTGTTGTTCGCCCCGCCAGGACGGTGGCTCCTTAACCCGGCCGGAAATGCCGTGTCGCCGGCCCCCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCa                                                               <  2:138898/218‑1 (MQ=255)
                                                                                                                                                                                   ggCGTAAGCCCGCGCAAAATGGGGA‑TCCGCGGGAGTTTATTTTGCCACTGCAGGGGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCa                                                               <  1:368314/238‑1 (MQ=255)
                                                                                                                                                                                    ttaagggccccccaaaagTGGCGA‑CCCGCGGGAGTTTGGTTTGCCACTGAATGGCCGTTGCCCCTTATACCAGCCGGAAATGCCGTGCCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCaga                                                             <  2:1037283/225‑1 (MQ=255)
                                                                                                                                                                                         aTACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCATTGCATGAGCGATGCCCCTTATACCAGCCTGAAAGGCCGTGTCGCCCGCCCCCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGaa                                                        <  1:969553/239‑1 (MQ=255)
                                                                                                                                                                                              gcgcAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGCTGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTc                                                    >  1:603742/1‑238 (MQ=255)
                                                                                                                                                                                              gcgcAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGGGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCGCCGCCAACCAAAAAACCaagaaaaaatac                                                    >  2:321163/1‑227 (MQ=255)
                                                                                                                                                                                               cgcAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGTTGGGCCCCATAGTCGCCCCTACTGGCGACCCCTGGGCCAATAAAAAAACCAAAAAAAAATTCGc                                                  >  2:224882/1‑239 (MQ=255)
                                                                                                                                                                                               cgcAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGGGTTGATGGGCCACCTAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGc                                                  >  2:299617/1‑239 (MQ=255)
                                                                                                                                                                                               cgcAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGGGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCACTCAACAAACCAAGCAAAAATTCga                                                  >  1:963061/1‑238 (MQ=255)
                                                                                                                                                                                                   aaggggCGA‑TCGGGGGGGGTTTGGTTTGCCCCCGCATGGCGGGTTCCCCTTAGCCCAGCCGGAAGTTCGGGGGCCGCCGCCGCCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGAc                                              <  2:346886/235‑1 (MQ=255)
                                                                                                                                                                                                    aaTGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTCGCGCGCGGGCAGCGATGTTCCGGCGCCAAGGGGGATGGGGGGTTGATGGGCCACATAGCCGCGCATACTGGGGACCTCTGGGCCAACACACAAAACAAAAAGaaaaaccctaccc                                             >  2:274359/1‑229 (MQ=255)
                                                                                                                                                                                                          gA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCACCAAACCAGAGAGAAATTCGcctgtctcttca                                       >  1:1037283/1‑228 (MQ=255)
                                                                                                                                                                                                             tCAGGGGGAGTTTAGTTTGCCACGGCATGAGCGAGGCTCCTTATCCCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTcgcg                                     <  1:997050/239‑1 (MQ=255)
                                                                                                                                                                                                               aGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCCCATAGGCGCGCATACTGGCGACCTCTGCGCCAATCAAAAAACCCGAGAAAAATTCGCTGACCTGTTCGCggg                                   >  2:967366/1‑239 (MQ=255)
                                                                                                                                                                                                               aGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCCCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGGGTTGATGGGCCACATAGTCGCGCATACTGGCGACCCCTGCGCCAATCACAAAACCAGAGGGAAATTCCCGGCACTGTTCGCggg                                   >  2:640395/1‑239 (MQ=255)
                                                                                                                                                                                                                   ggATTTTAGTTTGCCCCTGCAGGGGCGATGCTCCTTATCCCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGaa                                <  1:897842/238‑1 (MQ=255)
                                                                                                                                                                                                                   ggAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTg                                                                                                                                                                      <  1:39014/104‑1 (MQ=255)
                                                                                                                                                                                                                   ggAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTg                                                                                                                                                                      >  2:39014/1‑104 (MQ=255)
                                                                                                                                                                                                                     agtttagtttCCCACTGCATGTGCGCTGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCCCCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAgt                              <  1:307348/238‑1 (MQ=255)
                                                                                                                                                                                                                         taggttGCACCTCCATGAGCGATACGCCTTATACCGGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTcc                         <  1:922384/239‑1 (MQ=255)
                                                                                                                                                                                                                            tttCCCCCTGCATGGGCGTTGCTCCTTATCCCAGCCTGAAAGGCCGTGCCGCCCGCCCCCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTCCCAg                      <  2:180407/239‑1 (MQ=255)
                                                                                                                                                                                                                                ccACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGCCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACAAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGGGTTCCCAGaac‑a                 >  1:902134/1‑239 (MQ=255)
                                                                                                                                                                                                                                    tGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTCCCAGCAC‑ATGCg             >  1:1038904/1‑239 (MQ=255)
                                                                                                                                                                                                                                      cATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCTCGGGGAAGTGTTCCAAgaccatcctgg            >  1:834402/1‑229 (MQ=255)
                                                                                                                                                                                                                                           gggtcgCTCCTTTACCCCGCCGGAAAGGCGGTGGCGCCCGCCCCCGCCGTCACGGCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTCCCAGCAC‑ATGCGAGGcgcg      <  2:869342/234‑1 (MQ=255)
                                                                                                                                                                                                                                           gCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTAGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGACACATAGTCGCGCATACTGGCGACCTCTGCGCCACTCAACAAACCAGAGAGCAATTCGCTGACCTGTTCGAGGGGAAGTGTTCCCCGCAC‑AGCCGCGGcgcg      >  1:463605/1‑239 (MQ=255)
                                                                                                                                                                                                                                              aTGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGCTGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCCCGGGGAAAGGGTCCCAGCAA‑ATGGAAGGGGCGaa    >  2:241225/1‑238 (MQ=255)
                                                                                                                                                                                                                                              aTGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGCCAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTTTTCGCGGGGAAGGGTT‑CCAACACAATGCGGGGGGCGaaa   >  2:938015/1‑238 (MQ=255)
                                                                                                                                                                                                                                              aTGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGGGTTCCCAGCAC‑ATGCGAGGCGCGa     >  1:645533/1‑237 (MQ=255)
                                                                                                                                                                                                                                                gCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGGGTTCCCAGCAC‑ATCCGAGGCGCGAACt  >  1:975460/1‑238 (MQ=255)
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                            
GAGCGCATCGACCTGTTCAGGTTTCAGTACCGTACCTGCGCCAATCAACGCCTTGTCGCCGTACGCATCAACGATGGCGGGAATGCTTTGCTCCCATTGTGGGGAATTCAGCGGGATTTCAACCGCGTCGAA‑CCCGGC‑GTCAATCACCGCGCCAACAT‑GCG‑CCAGCGCCTCGTCGGGCGTAATACCGCGCAAAATGGCGA‑TCAGCGGGAGTTTAGTTTGCCACTGCATGAGCGATGCTCCTTATACCAGCCTGAAATGCCGTGTCGCCCGCCACCGCCGTCACGTCGCAACCCATCGCCTGAAAGGCTTGCTGGTAGCGCGCGGTCAGCGATGTTCCGGCGACAAGGGTGATGGCGTGTTGATGGGCCACATAGTCGCGCATACTGGCGACCTCTGCGCCAATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTCCCAGCAC‑ATGCGAGGCGCGAACT  >  NC_000913/3873384‑3873856

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A