Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F9 I0 R1
|
260 |
102.5 |
2178490 |
93.2% |
2030352 |
226.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,054,191 |
T→G |
10.0% |
T363P (ACC→CCC) |
glnG ← |
fused DNA‑binding response regulator in two‑component regulatory system with GlnL: response regulator/sigma54 interaction protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,054,191 | 0 | T | G | 10.0%
| 281.8
/ 2.4
| 128 | T363P (ACC→CCC) | glnG | fused DNA‑binding response regulator in two‑component regulatory system with GlnL: response regulator/sigma54 interaction protein |
| Reads supporting (aligned to +/- strand): ref base T (45/60); new base G (17/2); total (66/62) |
| Fisher's exact test for biased strand distribution p-value = 2.65e-04 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 130 total aligned reads displayed.
TGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTCCAGCTCTGGCTGCGCTTCGGAAAGCAGATTTTGATGACCGGAACGCAGCGCTCTGTCTGCCCACTGCGCAAGAAGCGTCGCCCAGCTGTCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGTTCGCGCAGCGGCGGCAGATGAACGCGGATAACGTTCAGGCGGTGGAACAGATCCTCACGGAACTTACCTTCCTGCACTCGCTGTTCG > NC_000913/4053953‑4054426
|
tGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTCCAGCTCTGGCTGCGCTTCGGAAAGCAGATTTTGATGACCGGAACGCAGCGCTCTGTCTGCCCACTGCGCAAGAAGCGTCGCCCAGCTGTCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCACATCCTGAATCAACACTTCCTGCCCGCCGGCCATCCCCGTTAGCAACCGCCAGgt > 1:1055892/1‑239 (MQ=255)
aaCGCGGTCGTCAGTAACGTCCGCTCCAGCTCTGGCTGCGCTTCGGAAAGCAGATTTTGATGACCGGAACGCAGCGCTCTGTCTGCCCACTGCGCAAGAAGCGTCGCCCAGCTGTCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCACCT‑g > 1:756046/1‑239 (MQ=255)
aaCGCGGTCGTCAGTAACGTCCGCTCCAGCTCTGGCTGCGCTTCGGAAAGCAGATTTTGATGACCGGAACGCAGCGCTCTGTCTGCCCACTGCGCAAGAAGCGTCGCCCAGCTGTCCGGTTGCATTTGCGAAGTACTCCCCGCAACCGTTGATCCAAACAGTTCGCCGGGCAAATCCTGAATCAAAACTTCCTGCCCGGCGGCCATCACCCTTAGCCCCCGGACGGGGTTTTcccaccg > 2:532463/1‑234 (MQ=255)
tgtcgtcAGTACCGTCCGGCCCAGCTCGGGGCGGGCTTCGGAAAGCAGTTTTTGATGACCGGAACGCAGCGCTCTGGCTGCCCACTGCGCAAGAAGCGTCGCCAAGCTGTCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCa < 2:844634/238‑1 (MQ=255)
gttctcAGTAACCTCCGCTTCAGCTTTGGCTGCGCTTCGGAAAGCAAATTTTGATGGCCGGAACGCAGCGGTCTGTCTGCCCACTGCGCAAGAAGCGTCGCCCAGCTGTCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCAc < 2:17086/235‑1 (MQ=255)
gtcgtcAGTAACGTCCGCTCCAGCTCTGGCTGCGCTTCGGAAAGCAGATTTTGATGACCGGAACGCAGCGCTCTGTCTGCCCACTGCGCAAGAAGCGTCGCCCAGCTGTCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTGGCCGGGCAAATCCTGAATAACCACTTCCTGCACGGCGGCCATCCCCCTTCCCCAGAGGAAGGGGATTTCCAGCT‑Ggcgccc > 2:651546/1‑237 (MQ=255)
aCGTCCGCTCCAGCTCTGGCTGCGCTTCGGAAAGCAGATTTTGATGACCGGAACGCAGCGCTCTGTCTGCCCACTGCGCAAGAAGCGTCGCCCAGCTGTCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGc < 1:791303/239‑1 (MQ=255)
cGCTCCAGCTCTGGCTGCGCTTCGGAAAGCAGATTTTGATGACCGGAACGCAGCGCTCTGTCTGCCCACTGCGCAAGAAGCGTCGCCCAGCTGTCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGGGTTTTCCAGCT‑GGGCCACGTTCCC‑CGGCCAcc > 1:251959/1‑237 (MQ=255)
cGCTCCAGCTCTGGCTGCGCTTCGGAAAGCAGATTTTGATGACCGGAACGCAGCGCTCTGTCTGCCCACTGCGCAAGAAGCGTCGCCCAGCTGTCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGCCCATCACCGTTAGCCAGCGGCAGGAGTTTTCCAGCG‑GGCGCCCgggtgccggccccg > 2:584696/1‑225 (MQ=255)
tCCAGCTCTGGCTGCGCTTCGGAAAGCAGATTTTGATGACCGGAACGCAGCGCTCTGTCTGCCCACTGCGCAAGAAGCGTCGCCCAGCTGTCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGGGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCCCGCCAg > 1:782180/1‑239 (MQ=255)
ccAGCTTTGGCTGCGCTTCGGAAATCAGATTTGGATGACCGGAACGCAGCGCTTGGTCTGCCCACTGCGCAAGAAGCGGCGCCCAGCTGTCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGa < 1:584696/239‑1 (MQ=255)
ccAGCTCTGGCTTCGCGTCGGAAAGCAGATTTTGATGACCGGAACGCCGCGCTCTGTCTGCCCACTGCGCAAGAAGCGTCGCCCAGCTGTCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGa < 1:229185/239‑1 (MQ=255)
ccAGCTCTGGCTGCGCTTCTGAAAGCAGATTTGGATGACCGGAACGCAGCGCTCTGTCTGCCCACTGCGCAAGAAGCGTCGACCAGCTGTCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACTCTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGa < 1:651546/239‑1 (MQ=255)
ccAGCTCTGGCTGCGCTTCGGAAAGCAGATTTTGATGACCGGAACGCAGCGCTCTGTCTGCCCACTGCGCAAGAAGCGTCGCCCAGCTGTCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGa < 1:957382/239‑1 (MQ=255)
gCTGCGCTTCGGAAAGCAGATTTTGATGACCGGAACGCAGCGCTCTGTCTGCCCACTGCGCAAGAAGCGTCGCCCAGCTGTCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCCGCGGCAGGGGTTTTCCAGCG‑CGCGCACCTTGCCGGGGCCACCCCAAACG‑GTCaga > 2:229185/1‑239 (MQ=255)
gCTGCGCTTCGGAAAGCAGATTTTGATGACCGGAACGCAGCGCTCTGTCTGCCCACTGCGCAAGAAGCGTCGCCCAGCTGTCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTCAATCAACACTTCCTGCCCGGCGGCCATCACCGCTAGCCAGCGGCAGGTGTTTTTCAGCC‑GGCGCACGTTGCC‑TGGCCACCCCCGACGCGGCaga > 1:541088/1‑239 (MQ=255)
cgcTTCGGAAAGCAGATTTTGATGACCGGAACGCAGCGCTCTGTCTGCCCACTGCGCAAGAAGCGTCGCCCAGCTGTCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGCGTTTTCCGGCT‑GGCGCACGTTGCC‑TTGCCCCGCCAGACGCGTCAGacca > 1:802852/1‑238 (MQ=255)
gcTTCGGAAAGCAGATTTTGATGACCGGAACGCAGCGCTCTGTCTGCCCACTGCGCAAGAAGCGTCGCCCAGCTGTCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGGGTTTTCCAACT‑GGCGCACGTTGCC‑TGGCCACGcacgacccgcccgatca > 1:432653/1‑221 (MQ=255)
cGGAAAGCAGATTTTGATGACCGGAACGCAGCGCTCTGTCTGCCCACTGCGCAAGAAGCGTCGCCCAGCTGTCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCCCGCCAGACCCGTCAGAGCAGCTTcc > 1:62987/1‑238 (MQ=255)
aGATTTTGATGACCGGAACGCAGCGCTCTGTCTGCCCACTGCGCAAGAAGCGTCGCCCAGCTGTCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCg < 1:32297/238‑1 (MQ=255)
ggtttttattcccGGAACGCCGCGCTCTGTCTGCCCACCGCGCAAGAAGCGTCGCCCCGCTGGCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCCCCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGa < 2:836355/228‑1 (MQ=255)
atttgtatgaCCGGAACGCCGCGCTCTGTCTGCCCACGGCGCAAGAAGCGTCGCCCGGCTGGCCGGTTGCATTTGCGAAGTACTCGCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACCCTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGa < 2:476340/232‑1 (MQ=255)
ttttGAAGACCGGAACGCAGCGCTCTGTCTGCCCACTGCGCAAGAAGCGTCGCCCAGCTGTCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTGCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGa < 1:323403/237‑1 (MQ=255)
tttGATGACCGGAACGCAGCGCTCTGTCTGCCCACTGCGCAAGAAGCGTCGCCCAGCTGTCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAACCAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGGGGTTTCCAGCTGGGCGCCCG‑TGCC‑TGGCACCGCCAGCCGCGGCAGGACCGCCTCGGGTTCCGGCTgg > 2:213635/1‑238 (MQ=255)
cgcTCTGTCTGCCCACTGCGCAAGAAGCGTCGCCCAGCTGTCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGGTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCCGACGCGTCAGAGCCGCTTCGGTTTCCGGATGCAGTAAATTCGCtttcacg > 1:453576/1‑233 (MQ=255)
gcTCTTTCTGCCCCCTGCCCAAGAAGCTTCCCCCAGCTTTCCGGTTGCCTTTGCGAAGTTCTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTTAATCAACCCTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGcc < 2:782180/239‑1 (MQ=255)
tctgCCCACTGCGCAAGAAGCGTCGCCCAGCTGTCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGGGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCCGTAACTTCCCTTCTACGCCCAGtt > 1:695724/1‑238 (MQ=255)
ctgCCCACTGCGCAAGAAGCGTCGCCCAGCTGTCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTcg < 1:2643/239‑1 (MQ=255)
cccctggccAAGAAGCCTCGCCCAGCTGGCCGGTTGCATTTGCGAAGTTCCCCCCGCAACCGTTGATTCAAACAGGTCGCCGGGCAAATCCTGAATCACCACTTCCTGCCCGGCGGCCATCCCCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTcgcgcg < 2:724637/231‑1 (MQ=255)
cTGCGCAAGAAGCGTCGCCCAGCTGTCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTcggccgcg > 1:238769/1‑238 (MQ=255)
cTGCGCAAGAAGCGTCGCCCAGCTGTCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACCTTGCC‑TGGCCACGCCAGACCCGGCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCCCTTCTACCCCCCGTTCCCGCgggg > 2:1004272/1‑239 (MQ=255)
cTGCGCAAGAAGCGTCGCCCAGCTGTCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGGGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCCGTTcgcgcgcg > 1:836596/1‑238 (MQ=255)
cTGCGCAAGAAGCGTCGCCCAGCTGTCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGCGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGGGCAGCTTCGGTTTCCCGAGGCAGTAACTCCGCTTTTACCCCCAGTTcgcgcgcg > 1:607719/1‑238 (MQ=255)
tGCCCAAGAAGCGTCCCCCAGCTGTCCGGTTGCATTTGCTAAGTCCTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGc < 2:65617/239‑1 (MQ=255)
gggcAAGAAGCGTCGCCCAGCTGTCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCa < 1:1004272/237‑1 (MQ=255)
gcgcAAGAAGCGTCGCCCAGCTGTCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTTCC‑TGGCCACGCCAGACGCGTCAGATGCGCTTCGGTTTCCGGATGCCGTAACTTCCCCTCTACGCCACGTTcgcgcggcgga > 2:290897/1‑234 (MQ=255)
gcgcAAGAAGCGTCGCCCAGCTGTCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCCCACGTTGCC‑CGGCCCCCCCAGACCGGTCAGAGCACCTTCGGTTTCCGCATGCGGTAACTTGCCTCTTACGCCCATTGcgcgcgcgcga > 2:888587/1‑236 (MQ=255)
gcAAGAAGCGTCGCCCCGCTTTCCGGTTTCTTTGGGGAAGTGCCCCCCGCAACCGTTGATTCAAACAGTTCCGCGGGCCAATCCTGAATCCACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAc < 2:471834/239‑1 (MQ=255)
gcAAGAAGCGTCGCCCAGCTGGCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACGTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAc < 1:180604/239‑1 (MQ=255)
gTCGCCCAGCTGTCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGGaaaaa > 1:105877/1‑239 (MQ=255)
ggTCCGGTTGCATTTGCGAAGTACCCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGgcgcgc < 1:877070/237‑1 (MQ=255)
tCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCCATTCCCGCGCGGCAAC‑CTGTAAAAAATAGCGCCCCa > 2:954149/1‑238 (MQ=255)
tCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCCCGCGGCAAC‑CTGCTAAAAATGGCGCGcccg > 1:136314/1‑237 (MQ=255)
tCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGGTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGCCCGAGCAGCTTCGGTTTCCGGAGGCGGGAACTTCGCTTCTACGCCCAGTTCGCGACCGGCCAC‑CTGTaaaaaagagcggccaaa > 2:941596/1‑228 (MQ=255)
tCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCCGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGGGTTTTCCAGCT‑GGCGCCCGTTGCC‑TGGCCACCCCCGCCCCGCCCAGGCGGCTTCGGTTTCCGGATGCAGTACATTTCCTTCTTCCCCCAGTTCCCGGCCGGCAAC‑CTGGAAAAAAAGGGACGCCAg > 2:672782/1‑239 (MQ=255)
ccgtgtggattttggatttgctctCCGAAACCGTTGATGCAAACAGTTCGCCGGACAAATCCGGGAGCAACCCTTCCTGCCCGGCGGCCAGCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTACCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGa < 2:149194/219‑1 (MQ=255)
ttGCATTTGCGAAGTACTCCCCGGAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑gg < 1:716612/238‑1 (MQ=255)
tttGCGAAGTACTCTCCGCCACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACTCTTCCTGCCCGGCGGCCAGCACCGTTAGCCGGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAata < 1:520079/239‑1 (MQ=255)
tttGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑CGGCCCCCCCAAACGCGCTCGAGCGACTTCGGGTTCCGGATTCCGCAACTTCGCTTCCACGCCCAGTT‑GCCCGCGGGAACACTGTaaaaaaacgcccgcagaacaggggaaa > 2:1005855/1‑218 (MQ=255)
ctccccccaCCGTTGATTCGAGCAGTTCGCCGGGACAATCCTGAACCAACCCTTCCGGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑CGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGt < 2:130506/231‑1 (MQ=255)
ccGCAACCGTTGATTCAAACCGGTCGTCGGGCAAATCCTGAACCAACCCTTCCTGCCCGGCGGCCATCACCGTTATCCAGCGGCAGTTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGTCGTTcg < 1:140434/239‑1 (MQ=255)
cGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGa > 1:1070191/1‑214 (MQ=255)
cGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGa < 2:1070191/214‑1 (MQ=255)
gtttaagggccgggggtgggcccccGGGCAAATCCCGAACCAACCCTTCCCGCCCGGCGGCCATCCCCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGTTCgcgc < 2:725311/216‑1 (MQ=255)
aaCCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGGTGCAGGAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATAGCGCGCCAGAC‑GGGGAAACACTTCCCgcacttccgccg > 2:838222/1‑228 (MQ=255)
aaCCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCC‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGCGCAGCTTCGGTTTCCGGATGCAGGAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CCGTAAAAAAATGCGCGCCACACAGGGGaaacttcccccaccgtccccaa > 2:189699/1‑219 (MQ=255)
aaCCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGGGTTTTCCAGCT‑GGCGCCCGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGCTGTAGTAACTTCGCTTCACCGCCCAGTTCGCCCGGGGCAAC‑CTGTAAAAAATGGGCGGCCCGAA‑CGGGAATAACTTtccccagttacgcca > 2:452504/1‑227 (MQ=255)
ttGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCCAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATATTCCCGACGTTCGCGCAgaggg > 1:364046/1‑238 (MQ=255)
ttGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGTTCGCGCAgcggc > 1:553915/1‑239 (MQ=255)
tCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCCACGTTCGCGCAGCGGCGCCAg > 1:933948/1‑239 (MQ=255)
gTTCGCCGGGCAAATCCTGAAGCAACTTTTCCCGCCCGGGGGCCATCCCCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGTAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGTTCGCGCAGCGGCGGCAGATGAAcg < 2:407068/239‑1 (MQ=255)
ttCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGTTAGCGCAGCGGCGGCAGATGAAcgc > 1:90652/1‑239 (MQ=255)
ccccGGGCAAATCCTGTATCCACCCTTCCCGCCCGGCGGCCATCACCGTTAGCCCGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGGTTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGTTCGCGCAGCGGCGGCAGATGAACGCgg < 2:311363/237‑1 (MQ=255)
ccGGGCAAATCCGGGATCACCCCTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCATGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGTTCGCGCAGCGGCGGCAGATGAACGCGGAt < 1:969273/239‑1 (MQ=255)
cGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGCCGTTCGCGCAACggcggccgcggccccttata > 1:725311/1‑224 (MQ=255)
gCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGTTCGCGCAGCGGCGGCAGATGAAGGCGGATAACg > 1:311363/1‑239 (MQ=255)
atccgggaccAACCCTCCCCGCCCGGGCGCCATCCCCGGTAGCGCGCGGCAGGTGTTTTCCAGCT‑GGCTCACGTTGCC‑TGGTCACGCCAGACGCGTCAGAGCAGCGTCGGTTTCCGGATGCAATAACTGCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGTTCGCGCAGCGGCGGCAGATGAACGCGGATAACGTTCa < 2:777102/230‑1 (MQ=255)
acccctaaaacacccTTCCGGCCCGGGGGCCATCCCCGTTACCCAGGGGCGGGTGTTTTCCCGCT‑GGCGGACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGTTCGCGCAGCGGCGGCAGATGAACGCGGATAACGTTCa < 2:695724/225‑1 (MQ=255)
cccgAATCAACCCTTCCTGCCCGGCGGCCATCCCCGGTAGCCAGCGGCAGGGTTTTTCCAGCT‑GGCGCCCGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGTTCGCGCAGCGGCGGCAGATGAACGCGGATAACGTTCAgg < 1:672782/236‑1 (MQ=255)
ccTGAATCCACCTTTCCTGCCCGGCGCCCCTCCCCTTTGGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGTTCGCGCAGCGGCGGCAGATGAACGCGGATAACGTTCAgg < 2:756046/239‑1 (MQ=255)
ccTGAACCAACCCTCCCCGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCGGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGTTCGCGCAGCGGCGGCAGATGAACGCGGATAACGTTCAgg < 2:889253/239‑1 (MQ=255)
gaactaacctttCCTGCCCGGGGGCCATCCCCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGTAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGTTCGCGCAGCGGCGGCAGATGAACGCGGATAACGTTCAGGCgg < 1:452504/229‑1 (MQ=255)
gAATCAACCCTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGTTCGCGCAGCGGCGGCAGATGAACGCGGATAACGTTCAGGCgg < 1:290897/239‑1 (MQ=255)
cgcAACGCTTCCGGCCCGGCGGCCAGACCCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGTTCGCGCAGCGGCGGCAGATGAACGCGGATAACGTTCAGGCgg < 1:297132/235‑1 (MQ=255)
aaCACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTccc > 2:822488/1‑187 (MQ=255)
aaCACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTccc < 1:822488/187‑1 (MQ=255)
cacTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGGGCGGCCAC‑CTGTAAAAAATGGCGGGCCAAAC‑GGGGAAAATCTTCCCACCGTTCGCCCACAGGCGGCGGATGAAAACGGATAACATTCAGGCGGGGGaaaa > 2:850140/1‑237 (MQ=255)
ttCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGTTCGCGCAGCGGCGGCAGATGAACGCGGATAACGTTCAGGCGGTGGAACAGAt < 1:353557/239‑1 (MQ=255)
tCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACCCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCCCTTCTACGCCCAGTTCGCGCGCGGCCAC‑CCGTAAAAAATGGCCCCCCAGAC‑GGGGAATATCTTCCCGACGTTCGCCCCGCGGCGGCCGCTAAACGCGGGAAACGTTCaccggcggggaacaaa > 2:793236/1‑223 (MQ=255)
tCCTGCCCGGCGGCCATCACCCTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGTTCGCGCAGCGGCGGCAGATGAACGCGGATAACGTTCAGGCGGTGGAACAGATc < 1:23725/239‑1 (MQ=255)
gCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGGTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGTTCGCGCAGCGGCGGCAGATGAACGCGGATAACGTTCAGGCGGTGGAACAGATCCTCa < 1:946856/239‑1 (MQ=255)
gCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGGGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCACCAGCA‑CGGGAATATCTTCCCGACCTTTGCCCAGCGGCGGCCACTGAAACCCGCAAAAGTTCAGGCGGGGGCAAAGagactcc > 2:1043886/1‑233 (MQ=255)
gCCCGGCCGCCATCCCCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGTTCGCGCAGCGGCGGCAGATGAACGCGGATAACGTTCAGGCGGTGGAACAGATCCTCa < 1:693118/239‑1 (MQ=255)
cgccGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGTTCGCGCAGCGGCGGCAGATGAACGCGGATAACGTTCAGGCGGTGGAACAGATCCTCa < 1:353693/237‑1 (MQ=255)
ccccGGCGGCCTTCCCCGTTAGCCCGCGGCGGGGTTTTTCCAGCT‑GGCGCCCGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAACATCTTCCCGACGTTCGCGCAGCGGCGGCAGATGAACGCGGATAACGTTCAGGCGGTGGAACAGATCCTCa < 2:432653/238‑1 (MQ=255)
ccGGGGGCCCTCCCCGTTGGCCGGGGGCGGGTTTTTTCCAGCT‑GGGGCACGTGGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGTTCGCGCAGCGGCGGCAGATGAACGCGGATAACGTTCAGGCGGTGGAACAGATCCTCACg < 2:932892/239‑1 (MQ=255)
gcggcCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCCGAGCAGCTTCGGTTTCCGGATGCAGTAACTTAGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGTTCGCGCAGCGGCGGCAGATAAACCCGGATAACGTTTAGGCGTGGGAACAGATCCTCACggga > 1:161155/1‑237 (MQ=255)
gcggcCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGTTCGCGCAGCGGCGGCAGATGCACCCGGGTAAAGTTCCGGCGGTGGAACAGATCCTCACGGa > 1:60012/1‑238 (MQ=255)
ggcCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGTTCGCGCAGCGGCGGCAGATGAACGCGGATAACGTTCAGGCGGTGGAACAGATCCTCACGGAACt > 1:766965/1‑239 (MQ=255)
tggcccgggggaGGTGTTTGCCGGCT‑GGCGCTCGTTGCC‑GGGCCACGGCAGACGGGTCAGGGCAGGTTCGGTTTCCGGATGCAGTAACTTCGCCTCGACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGTTCGCGCAGCGGCGGCAGATGAACGCGGATAACGTTCAGGCGGTGGAACAGATCCTCACGGAACTTACCTTCCTGCa < 2:1055892/228‑1 (MQ=255)
gCCAGGGGGGGGTGTTTTCCGGGG‑GGCGCACGTTGCC‑TGGCCACGCCAGGCGGGGCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGTTCGCGCAGCGGCGGCAGATGAACGCGGATAACGTTCAGGCGGTGGAACAGATCCTCACGGAACTTACCTTCCTGCACt < 2:214551/239‑1 (MQ=255)
gCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGTTCGCGCAGCGGCGGCAGATGAACCCGGATAACGTTCAGGCGGTGGAAACGATCCTCACGGAACTTACCTTCCTGCAc > 1:384149/1‑238 (MQ=255)
cAGGGGCGGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGTTCGCGCAGCGGCGGCAGATGAACGCGGATAACGTTCAGGCGGTGGAACAGATCCTCACGGAACTTACCTTCCTGCACTCg < 1:849654/239‑1 (MQ=255)
cAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGTTCGCGCAGCGGCGGCAGATGAACGCGGATAACGTTCAGGCGGTGGAACAGATCCTCACGGAACTTACCTTCCTGCACt < 1:13506/237‑1 (MQ=255)
gCGGCAGGTGTTTGCCAGCT‑GGCCCACGTTGCC‑TGGCCACGCCAGACGGGTCAGAGCAGCTTCGGTTTCCGGATGCAGGAACTTCGCTTCTACGCCCAGGTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGTTCGCGCAGCGGCGGCAGATGAACGCGGATAACGTTCAGGCGGTGGAACAGATCCTCACGGAACTTACCTTCCTGCACTCGCt < 1:213635/239‑1 (MQ=255)
cGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGTTCGCGCAGCGGCGGCAGATGAACGCGGATAACGTTCAGGCGGTGGAACAGATCCTCACGGAACTTACCTTCCTGCACTc > 1:707673/1‑235 (MQ=255)
cAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGTTCGCGCAGCGGCGGCAGATGAACGCGGATAACGTTCAGGCGGTGGAACAGATCCTCACGGAACTTACCTTCCTGCACTCGCTGtt < 1:838222/238‑1 (MQ=255)
ggTTTTTTCCAGCC‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGTTCGCGCAGCGGCGGCAGATGAACGCGGATAACGTTCAGGCGGTGGAACAGATCCTCACGGAACTTACCTTCCTGCACTCGCTGTTCg < 1:850140/238‑1 (MQ=255)
ggTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑Ct < 1:569750/110‑1 (MQ=255)
ggTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑Ct > 2:569750/1‑110 (MQ=255)
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TGCGTATGTCGCAACGCGGTCGTCAGTAACGTCCGCTCCAGCTCTGGCTGCGCTTCGGAAAGCAGATTTTGATGACCGGAACGCAGCGCTCTGTCTGCCCACTGCGCAAGAAGCGTCGCCCAGCTGTCCGGTTGCATTTGCGAAGTACTCTCCGCAACCGTTGATTCAAACAGTTCGCCGGGCAAATCCTGAATCAACACTTCCTGCCCGGCGGCCATCACCGTTAGCCAGCGGCAGGTGTTTTCCAGCT‑GGCGCACGTTGCC‑TGGCCACGCCAGACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAAC‑CTGTAAAAAATGGCGCGCCAGAC‑GGGGAATATCTTCCCGACGTTCGCGCAGCGGCGGCAGATGAACGCGGATAACGTTCAGGCGGTGGAACAGATCCTCACGGAACTTACCTTCCTGCACTCGCTGTTCG > NC_000913/4053953‑4054426
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
