Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F9 I0 R1 260 102.5 2178490 93.2% 2030352 226.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,093,652 A→C 10.7% V207G (GTG→GGG)  rhaD ← rhamnulose‑1‑phosphate aldolase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,093,6520AC10.7% 287.7 / 2.7 131V207G (GTG→GGG) rhaDrhamnulose‑1‑phosphate aldolase
Reads supporting (aligned to +/- strand):  ref base A (55/53);  new base C (4/17);  total (59/72)
Fisher's exact test for biased strand distribution p-value = 8.27e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 132 total aligned reads displayed.

ACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGG  >  NC_000913/4093418‑4093877
                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                   
          tGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGtttt                                                                                                                                                                                                                      >  1:1011525/1‑239 (MQ=255)
          tGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGtttt                                                                                                                                                                                                                      >  1:784510/1‑239 (MQ=255)
          tGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGtttt                                                                                                                                                                                                                      >  1:5289/1‑239 (MQ=255)
          tGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAAGGtttt                                                                                                                                                                                                                      >  1:518978/1‑239 (MQ=255)
          tGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGGGGAAGGGCCACAACCCAAGC‑GAAAGattt                                                                                                                                                                                                                      >  1:641203/1‑239 (MQ=255)
          tGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGGCGGTCCGCGTCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAAAGgttt                                                                                                                                                                                                                      >  2:347520/1‑239 (MQ=255)
            cGGATCATGTTTGCTCCTTACAGCGCCAGCGCCCTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTg                                                                                                                                                                                                                    <  1:711963/239‑1 (MQ=255)
                tCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGGTTTTGCAt                                                                                                                                                                                                                 >  1:723664/1‑238 (MQ=255)
                acATGTTTGCTCCTTACAGCGCCAGCGACATGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCAt                                                                                                                                                                                                                 <  1:770642/237‑1 (MQ=255)
                    gTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCGTCTCtt                                                                                                                                                                                                            <  1:137634/239‑1 (MQ=255)
                         cTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCCCGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGCAGGTTTCATCCACCGTCGGTCCCCTCCCGAGAACCCCTGGGCAGGGCCAC‑ACACCAACGGAATGGTTTTGCATCCCTtggggg                                                                                                                                                                                                       >  2:407341/1‑235 (MQ=255)
                         cTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACCCCATGGAAGGGCCACAACACAAGC‑GCACGTTTTTGCATCTCTTGTGCg                                                                                                                                                                                                       >  1:822020/1‑239 (MQ=255)
                         cTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGCCTGTTTCATGACGCCCATCGAATAAACCTTCAATAATACTTGGGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGGCCGCTGCCGAAGACGCCGTGGCAGGACCCAAACACCAGC‑GAATGTTTTTGCATCCCTtgaggg                                                                                                                                                                                                       >  2:770642/1‑235 (MQ=255)
                          tCCTTACAGCGCCAGCGCACTGGCCAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCgg                                                                                                                                                                                                      <  1:1022909/239‑1 (MQ=255)
                             ttACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACCCCAGC‑GAACGTTTTTGCATCCCTTGTGCGGtg                                                                                                                                                                                                    >  2:678564/1‑237 (MQ=255)
                              tgcagcgcccgggcCCTGGCGAGGGGCGTAACGCCGAACAGATTGCCGAGGGCTTTAAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGGTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGc                                                                                                                                                                                                  <  2:689222/237‑1 (MQ=255)
                              tACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTCTCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGCTTAACCCGAAGGTTTAATCCACAGTCGGTCCGCTGCCGAAGACGCCGGGGAAAGGCCACCACACCAGC‑GAATGTTTTTGCAACTCTTGTGCGGtgg                                                                                                                                                                                                   >  2:748235/1‑236 (MQ=255)
                              tACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGCCGCCGTGGAAGGGCCACAACACCAGC‑GAAGGTTTTTGCATCCCTTGTGCGGTCg                                                                                                                                                                                                   >  1:538027/1‑238 (MQ=255)
                                 agcgccagcgcACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGGGACGGTCCGCTGCAGCAGCCGCCTGGGAAGGGCCCCAACAACAAC‑GAACGTTTTTGCATCCCTTGCGCGGTCGCCTg                                                                                                                                                                                               >  2:623640/1‑239 (MQ=255)
                                   cgccagcgcACTGGCGAGTGGCGTAACGCCGAAACGCTTTCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGTTGTCGATTAAACCGAAGGTTTCCTCCAGCGTCGGTCCGCTGCCGAAGACCCCGTGGAAGGGCCAACACCCCAGC‑GCATGTTTTTGCAtccattggtgggtggccgggg                                                                                                                                                                                             >  2:195604/1‑220 (MQ=255)
                                      cagcgcACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GACTGTTTTTGCATCTCTTGTCCGGTCGCCTGGCCGa                                                                                                                                                                                          >  1:753974/1‑239 (MQ=255)
                                       cgcgcCCGGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGGTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGAt                                                                                                                                                                                         <  2:243714/238‑1 (MQ=255)
                                       agcgcACTGGCGAGTCGCGTAACGCCGCCACGCTTGCAGAGCGCTATCACCTCTTCACGGCTGTTGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTTTGCTGTTTTTTCTGCGGTATCGATTAACTCGAAGGGTTCATCCAGCGTCGGTCCGCTGCCTAAGACGCCGTGGAAGGGCCAAAACACCAGT‑CAAGGTTTTTGGCTTTTTTGTTTGGACTCCTGGCCGAt                                                                                                                                                                                         >  2:687856/1‑239 (MQ=255)
                                        gcgcACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGAtt                                                                                                                                                                                        >  1:625236/1‑239 (MQ=255)
                                        gcgcACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAAACGCCGTGGAAGGGCCACAACACCACC‑GAAGGTTTTTGCATCCCTTGTGGGGGAGCCTGGCCGttt                                                                                                                                                                                        >  2:17489/1‑239 (MQ=255)
                                            ccTGGGGAGGTGCGGACCGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTTTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGt                                                                                                                                                                                    <  2:660376/238‑1 (MQ=255)
                                                 cGAGTGGCTTACCCCCGAACCGCTTGCCGAGCGCTATCATCTCTTCACGGCTGATGGGCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAAGACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTg                                                                                                                                                                               <  2:1078555/239‑1 (MQ=255)
                                                   gggggcttacccccGAAACCTTTGCCGGGCGCTATCAACTCTTCCCGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGcc                                                                                                                                                                             <  2:1011525/227‑1 (MQ=255)
                                                        cGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGc                                                                                                                                                                        >  1:134232/1‑238 (MQ=255)
                                                          tAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCAcc                                                                                                                                                                     >  1:267533/1‑239 (MQ=255)
                                                               cccaaaCGCTTGCCGCGCGCTTTCAACTCTTCCCGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTGCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCa                                                                                                                                                                <  2:5289/236‑1 (MQ=255)
                                                               ccGAAACGGTTGCCGAGCGCTATCAACTCTTCACGGCTTATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCa                                                                                                                                                                <  1:103106/239‑1 (MQ=255)
                                                                  aaaCGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGGTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCCCACAACCAGC‑GAATGTTTTTGCGCACCCTTTGCGGCGCCCTGGCCGCTTTC‑TCCGGGCCAGGGAGCCACCCACgg                                                                                                                                                             >  2:759811/1‑239 (MQ=255)
                                                                   aaCGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACACCACCAGC‑GAATGTTTTTGCATCTCTTGGGCGGTCGCCCGGCCGATTTCGTCCGTGCC‑GGGGACCATCCCCGGc                                                                                                                                                            >  2:90705/1‑239 (MQ=255)
                                                                             gggcgcttttcaCTCTTCACGGATGATGGTTTGTTTCCTGCCGCCCATCGAATAACCCTTCCCTAATTCTTGTGCTGATTTTTCTGCGGTGTCGAGTAAGCCGAAGGTTGCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCaa                                                                                                                                                  <  2:849509/228‑1 (MQ=255)
                                                                             acaggttATCACCCCTTCCCGGCTGATGGTCTGTTTCATTCCCCCCGTCGAATAAACCTTCACTAATCCTTGTGCTGATTTTCCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCaa                                                                                                                                                  <  2:646276/233‑1 (MQ=255)
                                                                                   ttatacctcttgccggtggATTGTCTTTTTCATGCGGCCCATCGAAAAAACCTTCACTAATACTTTGGCTGATTTTTCTGCGGTGTCGATTAAACCGAATGTTTCATCCGGCGTCGGTCCGGTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGcccg                                                                                                                                            <  2:387723/221‑3 (MQ=255)
                                                                                          tctTCCAGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATTCTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGaa                                                                                                                                     <  1:852078/239‑1 (MQ=255)
                                                                                          tctTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGaa                                                                                                                                     <  1:422449/239‑1 (MQ=255)
                                                                                          tcctCACGGTTGTTGGTTTTTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAACCCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGaa                                                                                                                                     <  2:518978/236‑1 (MQ=255)
                                                                                            ttCACGGCTGATGGTCTGTTTCATGCCGCCCGTCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACCCCATCCgggct                                                                                                                                     >  1:646276/1‑235 (MQ=255)
                                                                                             tCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCTTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATa                                                                                                                                   >  1:1060722/1‑238 (MQ=255)
                                                                                             tCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATac                                                                                                                                  >  2:138712/1‑239 (MQ=255)
                                                                                               aCGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATaccc                                                                                                                                >  1:463571/1‑238 (MQ=255)
                                                                                               aCGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATacc                                                                                                                                 >  1:369599/1‑238 (MQ=255)
                                                                                                 cgttggtGGTTTGTTTTATGCCGCCCATCGAATAAACCTTCACTAAGTCTTGGTCTGATTTTTCTGGTGTGTCGATTAAACCGAAGGTTTCATCCCGCGTCGGCTCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCGTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATaccacc                                                                                                                              <  2:1059689/233‑1 (MQ=255)
                                                                                                    tGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAg                                                                                                                            <  1:913141/238‑1 (MQ=255)
                                                                                                      cgggTCTGTTTCATGGCGCCCATCGAATAAACCTTCACTAATGCTTGTGCTGATTTTTCCGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGaca                                                                                                                         <  1:394860/237‑1 (MQ=255)
                                                                                                      aTGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCACAATGCCAACGCCATCC‑GGAATACCACAGGaca                                                                                                                         >  1:903715/1‑238 (MQ=255)
                                                                                                        ggTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACTCCATCCGGGAATACCCCCAgccctc                                                                                                                       >  1:552912/1‑234 (MQ=255)
                                                                                                             gTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCCCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCCCGGCAAAAAGCCAACCCCATCCGGGAAAACCACCAAACACACgggg                                                                                                                  >  2:347084/1‑237 (MQ=255)
                                                                                                              ttttctggcccccATCTAATAACCCTTCCATAATTCTTGGGCTGGTTTTTCGGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCGGAAGCCGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGtgc                                                                                                                 <  2:134232/229‑1 (MQ=255)
                                                                                                                   tGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGGGCC‑GGGCCCCATCCACGGCAAAATGCCAACGCCATCCGGGAAACCCACCAAACACCCGGGGCGGcc                                                                                                             >  2:450549/1‑238 (MQ=255)
                                                                                                                   tGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGACCGTGCC‑GGGCACCACCCCCGGCAAAATGCCAACCCCACCCGGGAATACCACCCGACACCCgtggccccc                                                                                                             >  2:394860/1‑230 (MQ=255)
                                                                                                                        cccATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCCCCAGACACCCGGGGCCGCCTTtccc                                                                                                       >  2:948280/1‑238 (MQ=255)
                                                                                                                        cccATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCACCTATTGTGCGGTCGCCGGGCCAGTTTGTCCCGCGCC‑GGGCCCCATCCCCGGCACCATGCCACCGCCATCCGGGATAACCGCCCGACACCCGGGGCTGCCTcccc                                                                                                        >  2:824033/1‑238 (MQ=255)
                                                                                                                        cccATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGCTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGCCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCAATCCGGGACTACCACCAGCCACTCGGGGCGGCCTTccac                                                                                                       >  1:452870/1‑237 (MQ=255)
                                                                                                                                attaaCCTTCACTAATGCTTGTGCTGATTTTTCGGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCACAGTTgg                                                                                                <  1:752228/235‑1 (MQ=255)
                                                                                                                                aaaacccTTTACTAATACTTGTGCCTGTTTTTCTCCGGGTTCGAGTAAACCGAAGGTTCCCTCCGGCGCCGGCGCGCTGCCGAAGCCGCCGGGGAATGGCCACACCCCCAGC‑GAATGTTTTTGCATCTCTTGGGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCACAGTTgg                                                                                                <  2:822020/233‑1 (MQ=255)
                                                                                                                                aTAAACCTTCACTAATTCTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCACAGTTGGc                                                                                               <  1:722329/239‑1 (MQ=255)
                                                                                                                                    aCCTTCAAGAATACTTGGGCTGATTTTTCGGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGGCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACTCCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCACAGTTGGCGAGt                                                                                           <  1:931580/239‑1 (MQ=255)
                                                                                                                                              aTACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTcc                                                                                                                                                                                  >  2:552069/1‑143 (MQ=255)
                                                                                                                                                    gtgCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCCCCAGCCACACGGGGCCACCTTCCCCCCGTTGGCgcggacagacccccggggcg                                                                           >  2:61666/1‑220 (MQ=255)
                                                                                                                                                    gtgCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCCCCAGACACCCGGTGCTGCCTTCCCCCAGTTGCCGAGTGACGACCGCggggccg                                                                           >  2:932200/1‑234 (MQ=255)
                                                                                                                                                      gCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCCCGGTTGTCGAGTGAAGACCGCGgtgcggtt                                                                         >  1:601648/1‑234 (MQ=255)
                                                                                                                                                      gCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGtt                                                                         <  1:138712/239‑1 (MQ=255)
                                                                                                                                                         ttttttttTGCGGTTGCGGTTAAACCGAAGGTTTCATCCGGGGTGGGTCCGCGGCCGAAGGCGCCGGGGAAGGGCCACAACCCCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTc                                                                      <  2:267533/237‑1 (MQ=255)
                                                                                                                                                         ttttttttTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGCGGCCGGGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCCCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTc                                                                      <  2:463571/237‑1 (MQ=255)
                                                                                                                                                         ttttttcgtccGGTGCCGATTAAACCGAAGGTTTCATCCGGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACCCCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTc                                                                      <  2:768372/229‑1 (MQ=255)
                                                                                                                                                         tgttttttTGGGGTGTCGGTTAAACCGAAGGTTCTATCCGGCGTCGGTCCGGTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGG‑GAATGTTTTTGCAACTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑AGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTc                                                                      <  2:346514/237‑1 (MQ=255)
                                                                                                                                                         gtttttttTGCGGTGTCGTTTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTc                                                                      <  2:1031836/237‑1 (MQ=255)
                                                                                                                                                         ggttttttggggttgtCGTTTAAACCCAAGGTTTCACCCCGGGTGGTTACGCTGCCGAAGACGCCGTGGAAGGGCCACAACCCCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTc                                                                      <  2:745011/226‑1 (MQ=255)
                                                                                                                                                         gATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTc                                                                      <  2:625236/239‑1 (MQ=255)
                                                                                                                                                           ttttttTGGGGTGTCGTTTAAACCGGAGGTTTCACCCAGGGTCGGTCCGCTGCCGAAGACGCGGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTGGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCaa                                                                    <  2:640783/239‑1 (MQ=255)
                                                                                                                                                           tttttCTGCGGTGTCTATTAAGCCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGGCGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCaa                                                                    <  1:885131/239‑1 (MQ=255)
                                                                                                                                                           tttttCCGGGGGTTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACCCCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCaa                                                                    <  1:892733/239‑1 (MQ=255)
                                                                                                                                                               tCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCCCCATCCACGGCAAAATGCCAACGCCATCCGGGAATCCCACCAGACACTCGGGGCTGCCTTCCCACACTTGGCGAGTGAAACCCGCGGGGTCGTTTTCAAGAAc                                                                >  2:19583/1‑239 (MQ=255)
                                                                                                                                                               tCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTAc                                                                <  1:347084/239‑1 (MQ=255)
                                                                                                                                                                gtGCGGTTACGATTAAACCGAAGGTTTCATCCCGCGTCGGTCCGCTGCCGAAGGCGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACa                                                               <  1:17489/238‑1 (MQ=255)
                                                                                                                                                                         cGATTAAACCGGAGCTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGGGGAAGGGCCACAACGCCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAg                                                       <  1:690408/238‑1 (MQ=255)
                                                                                                                                                                         cGATTAAACCGAGTGTTTCATCCAGCGTCGGTCCCGTGCCGAAGACGCCGGGGAAGGGCCACAACCCCAGC‑GAATGTTTTTGCATCCCGTGGGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAgg                                                      <  2:1060722/239‑1 (MQ=255)
                                                                                                                                                                             taacccgggggttccccccgccgtcgtTCCGCGGCCGAAGACCCCGGGGAAGGGCCACAACACCAGC‑GAAGGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCC‑GGAATACCACCAGACACTCGGTGCTGCCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGAt                                                 <  2:903715/218‑1 (MQ=255)
                                                                                                                                                                              acacgggaGGTTTCACCCAGCGTCTGTCCGCTGTGCAATCAGCCGGAGAACGGCCACACCACCAGG‑GAATGTTTTGGCATCTCTTGTGCAGGCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCGCCAGACACTCGGTGCTGCCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGAt                                                 <  2:132656/232‑1 (MQ=255)
                                                                                                                                                                                    aaGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCACAGTTGGCGAGTGAAACCCCCGGGGTCGTTTTCAAGTaacatggggggggcggacagggt                                           >  2:753477/1‑217 (MQ=255)
                                                                                                                                                                                          tCATCCAGCGGCGGTCCGGTGCCGAAGACGCCGTGGAAGGGCCACAACCCCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGgtggc                                     <  1:19583/239‑1 (MQ=255)
                                                                                                                                                                                              ccAGCGTCGGTCCGCTGCCGAAGGCGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGgtggcgtgg                                 <  1:753477/239‑1 (MQ=255)
                                                                                                                                                                                              ccAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGTGCCACAACACCAGC‑GAATGTTTTTGCATCTCGTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCGTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGGGAGGGCGATCAGGTTGgtggcgtgg                                 <  1:325811/239‑1 (MQ=255)
                                                                                                                                                                                               cAGCGTCGGTCCGGTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGgtggcgtggc                                <  1:572997/239‑1 (MQ=255)
                                                                                                                                                                                                 gCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCCCAGTTGGCGAGTGAAGACCGCGGTGCCGTTTTCAAGAACACAGGGGAGGGGGGTCAGGTggggggggggggcg                              >  2:691638/1‑231 (MQ=255)
                                                                                                                                                                                                  cGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGCACCTCGGGGCTGCCTTCCCACCGTTGGCGAGTGAAGACCGCGGTGTCGGTTTCAAGAACCTAGATGAGGCGGATCAGGATGgtggcgtggcgag                             >  2:897301/1‑236 (MQ=255)
                                                                                                                                                                                                  cGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCCCAGTTGGCGGGTGAAGCCCGCGGGGTCGTTTTCAAGTACAAAGGGGAGGGCGATCCGGGTGGGGGCGGGGGAgg                             >  2:956062/1‑238 (MQ=255)
                                                                                                                                                                                                  cGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCACAGTTGGCGAGTGaa                                                                                        >  2:1037692/1‑180 (MQ=255)
                                                                                                                                                                                                  cGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCACAGTTGGCGAGTGaa                                                                                        <  1:1037692/180‑1 (MQ=255)
                                                                                                                                                                                                       gtccgccccccaaggcctcggggAAGGGCCCCACCCCCCGC‑GAATTTTTTTGCATCCCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGCCCCCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATg                        <  2:261598/218‑1 (MQ=255)
                                                                                                                                                                                                        tCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGGCCC‑GGGCACCCTCCACGGCAAAATGCCAACGCCCTCCGGGAAACCCCCCAGACACTCGGGGCTGCCTTCCCACCGTTGCCGAGTGACGACCCCGGTGTCGTTTTCCGGTACATAGGGCATGGCGATCCGGTTGgtggcggggcggggcgaga                       >  2:1059084/1‑230 (MQ=255)
                                                                                                                                                                                                            ccgCCGAAGTCGCCGTGGAAGGGCCCCACCCCCAGC‑GAATGTTTTGGCATCTCTTGTGCGGTCGCCGGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCAc                   <  2:46612/237‑1 (MQ=255)
                                                                                                                                                                                                            cTGCCGAAGACGCCGTGGAAGGGCCACAACCCCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCAc                   <  1:36772/239‑1 (MQ=255)
                                                                                                                                                                                                                         cGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCAGGATAACCCGACCTTTGCCg      >  1:212987/1‑239 (MQ=255)
                                                                                                                                                                                                                          gTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCACCGTTGGCGAGTGAAGACCGCGGGGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGGGGCGTGGCAGGGCATGCTCCCCCGATCTTTGCCGt     >  1:1065819/1‑239 (MQ=255)
                                                                                                                                                                                                                              aaGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTtgg  <  1:109581/238‑1 (MQ=255)
                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                   
ACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCAGCGTCGGTCCGCTGCCGAAGACGCCGTGGAAGGGCCACAACACCAGC‑GAATGTTTTTGCATCTCTTGTGCGGTCGCCTGGCCGATTTCGTCCGTGCC‑GGGCACCATCCACGGCAAAATGCCAACGCCATCCGGGAATACCACCAGACACTCGGTGCTGCCTTCCCACAGTTGGCGAGTGAAGACCGCGGTGTCGTTTTCAAGTACATAGGTGAGGGCGATCAGGTTGGTGGCGTGGCAGTGCATGATCACCCGATCTTTGCCGTTGG  >  NC_000913/4093418‑4093877

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A