Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F28 I0 R1 92 125.0 2504412 98.2% 2459332 226.8

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,394,323 T→G 13.3% V86G (GTC→GGC)  nnr → bifunctional NAD(P)H‑hydrate repair enzyme, C‑terminal domain ADP‑dependent (S)‑NAD(P)H‑hydrate dehydratase and N‑terminal domain NAD(P)H‑hydrate epimerase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,394,3230TG13.3% 291.7 / 3.1 119V86G (GTC→GGC) nnrbifunctional NAD(P)H‑hydrate repair enzyme, C‑terminal domain ADP‑dependent (S)‑NAD(P)H‑hydrate dehydratase and N‑terminal domain NAD(P)H‑hydrate epimerase
Reads supporting (aligned to +/- strand):  ref base T (43/52);  new base G (19/2);  total (65/54)
Fisher's exact test for biased strand distribution p-value = 1.66e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 124 total aligned reads displayed.

AAGAAAAACCCCGTAAGTATACCACACACCGTCTGGTACGCCGACGATATCCGCCGCGGAGAACGCGAGGCGGCAGATGTGCTGGGGCTCACACTCTATGAGCTGATGCTTCGCGCTGGCGAGGCCGCATTCCAGGTG‑TGTCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTACCGGTTTGCGGCAAGCGCCCCGCGAATCCATTAGCCAGTTAATCGACCACGCTAATTCCCATCCTGCGCCGATTGTG  >  NC_000913/4394085‑4394561
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                
aaaaaaacCCCCGAAATAATCCCCCCCGCCGTTTGTTCCGCCGCGGATACCCGCCCGGGAGAACGGGAGGGGGCGGATGGCGGGGGGCTCACTTTCTAGGGGCGGATGCTGCGCGCTGGGGGGGCGGCATTCCGGGTG‑TGTCGTTGGGCGTATCCGGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGt                                                                                                                                                                                                                                                  <  2:1100798/236‑1 (MQ=255)
      aaCCCCGTAAGTATACCACACACCGTCTGGTACGCCGACGATATCCGCCGCGGAGAACGCGAGGCGGCAGATGTGCTGGGGCTCACACTCTATGAGCTGATGCTTCGCGCTGGCGAGGCCGCATTCCAGGTG‑TGTCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GGTG‑GCTACGTGGGCGCGCGGACGGCCCAAGCGGTCgggct                                                                                                                                                                                                                                            >  2:60599/1‑236 (MQ=255)
               attaggcaccccacgtacTGGCACCCCGACGATACCCGCCGCGGAGAACGGGGGGCGGCAGGTGTGGTGGGGCGCCCACTCTATGCGGTGAGGATCCCCGCGGGGGGGGCCGCTTTCCAGGTG‑TGTCGGTCGGCGTACCCTGGCGGCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCa                                                                                                                                                                                                                                    <  2:432052/221‑1 (MQ=255)
                  accccccccacCGTCTGGTCCCCGAACAATCCCGGCGGGGGAGAGCGGGGGGCGGCAGATGTGCTGGGGCTCACCCTCTATGAGCTGATGCTTCGCGCTGGCGGGCCCGCATTCCAGGTG‑TGTCGTGCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACgtt                                                                                                                                                                                                                                <  2:1012017/231‑1 (MQ=255)
                    acaccccccctgtgtgtcggCCGTCGATACCCGCGGCGTAGAGGGGGGGGCGGCGGTGGGGCGGGGGCTCACATTCTAGGGGCTGATGCTGCGCGCTGGCGAGGCCTCATTCGGGGGG‑GGGCGTGCGGCTTAGCCTGACGCCCGCCGCTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACgttgt                                                                                                                                                                                                                              <  2:184896/220‑1 (MQ=255)
                        cacacCGTCTGGTACGCCGACGATATCCGCCGCGGAGAACGCGAGGCGGCCGATGTGCTGGGGCTCACACTCTATGAGCTGATGCTTCGCGCTGGCGAGGCCGCATTCCAGGTG‑TGTCGTTCGGCGTATCCTGCCGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGCGGTTG‑CCTCCCTGTTC‑CGCGACTGGCCACAACCGTCGGCCTTGAGGGCCCCGTGTTgg                                                                                                                                                                                                                           >  2:446529/1‑238 (MQ=255)
                        cacacCGTCTGGTACGCCGACGATATCCGCCGCGGAGAACGCGAGGCGGCAGATGTGCTGGGGCTCACACTCTATGAGCTGATGCTTCGCGCTGGCGAGGCCGCATTCCAGGTG‑TGTCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGGCGCGCGACTGGCCAAAGCGGGCGGCATTGAGGTCACgttggcccc                                                                                                                                                                                                                          >  1:1204689/1‑234 (MQ=255)
                          cacCGTCTGGTACGCCGACGATATCCGCCGCGGAGAACGCGAGGCGGCAGATGTGCTGGGGCTCACACTCTATGAGCTGATGCTTCGCGCTGGCGAGGCCGCATTCCAGGTG‑TGTCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGATGGGCGGTCATGGCAATAAAGGCGGC‑GGTG‑GCCTCGCGGTCCCCCGCCTGGGCAAACCGGGTGGCCTTGTGGTCCCGTTGTTgggc                                                                                                                                                                                                                         >  2:411577/1‑236 (MQ=255)
                           acCGTCTGGTACGCCGACGATATCCGCCGCGGAGAACGCGAGGCGGCAGATGTGCTGGGGCTCACACTCTATGAGCTGATGCTTCGCGCTGGCGAGGCCGCATTCCAGGTG‑TGTCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGG‑GATG‑GCCACGTGGGCGCGCGAACGGCCAAAGAGGGCGGCATTGAGGGCACGGTGTTGGcccc                                                                                                                                                                                                                       >  2:415968/1‑238 (MQ=255)
                           acCGTCTGGTACGCCGACGATATCCGCCGCGGAGAACGCGAGGCGGCAGATGTGCTGGGGCTCACACTCTATGAGCTGATGCTTCGCGCTGGCGAGGCCGCATTCCAGGTG‑TGTCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCa                                                                                                                                                                                                                       >  1:608545/1‑239 (MQ=255)
                           acCGTCTGGTACGCCGACGATATCCGCCGCGGAGAACGCGAGGCGGCAGATGTGCTGGGGCTCACACTCTATGAGCTGATGCTTCGCGCTGGCGAGGCCGCATTCCAGGTG‑TGTCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑CATG‑GCTTCGTGGTCGGGCGACTGGCCAAAGAGGTCGGGCTTGAGGGGACGTTTTTTGCCCa                                                                                                                                                                                                                       >  1:1020222/1‑239 (MQ=255)
                               tCTGGTACGCCGACGATATCCGCCGCGGAGAACGCGAGGCGGCAGATGTGCTGGGGCTCACACTCTATGAGCTGATGCTTCGCGCTGGCGAGGCCGTACTCCAGGTG‑TGTCGCGCGGCGTATCCTGACGCCCGCCACTGGTCGGCGCTGTGGGGTCGTGGTAATAACGGGGGC‑GGTGCGCT‑CGGGGGCGCGCGCGCGCCGAACGCGGGCGGCAGTGAGGGCGCGTCGTTCGccgcggca                                                                                                                                                                                                                   >  2:785060/1‑233 (MQ=255)
                               tCTGGTACGCCGACGATATCCGCCGCGGAGAACGCGAGGCGGCAGATGTGCTGGGGCTCACACTCTATGAGCTGATGCTTCGCGCTGGCGAGGCCGCATTCCAGGTG‑TGTCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTGCGTGGTGGCGCGACTGGCCACAGCGGTCCGGCTTGAGGTGACGTTCTTGGCCCAGgag                                                                                                                                                                                                                   >  1:153561/1‑239 (MQ=255)
                               tCTGGTACGCCGACGATATCCGCCGCGGAGAACGCGAGGCGGCAGATGTGCTGGGGCTCACACTCTATGAGCTGATGCTTCGCGCTGGCGAGGCCGCATTCCAGGTG‑TGTCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GAGG‑GCTACGGGGGTGCGCGGCTGGCCAAAACGGGCGGCATTGTGGGCACGTTGTGGGCCCCGgag                                                                                                                                                                                                                   >  2:1077939/1‑239 (MQ=255)
                               tCTGGTACGCCGACGATATCCGCCGCGGAGAACGCGAGGCGGCAGATGTGCTGGGGCTCACACTCTATGAGCTGATGCTTCGCGCTGGCGAGGCCGCATTCCAGGTG‑TGTCGTTCGGCGTATCCTGACGCCCGCCAC‑GGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGgaga                                                                                                                                                                                                                  >  1:905879/1‑239 (MQ=255)
                                cTGGTACGCCGACGATATCCGCCGCGGAGAACGCGAGGCGGCAGATGTGCTGGGGCTCACACTCTATGAGCTGATGCTTCGCGCTGGCGAGGCCGCATTCCAGGTG‑TGTCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCCTGGTAATAACGGCGGC‑GCTG‑GCTTCGTGGTGGCGCGGCGGGCCACAGCCGTCGGCCTTGAGGGCCAGTTGTTGGACCCggggg                                                                                                                                                                                                                  >  2:625176/1‑236 (MQ=255)
                                         cgacgaTATCCGCCGCGGAGAACGCGAGGCGGCAGCTGTGCTGGGGCTCACACTCTATGAGCTGATGCTTCGCGCTGGCGAGGCAGCATTCCAGGTG‑TGTCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCAGGGGAATAACGGCGGG‑GGTG‑GGTCTGTGGGCGCGGGACCGGCCAAAACAGACGGGGTTTGGGGCCCGTTGTTgggcacaggcggcgaacaa                                                                                                                                                                                                          >  2:253026/1‑221 (MQ=255)
                                         cgacgaTATCCGCCGCGGAGAACGCGAGGCGGCAGATGTGCTGGGGCTCACACTCTATGAGCTGATGCTTCGCGCTGGCGAGGCCGCATTCCAGGTG‑TGTCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCCACGGGGGCGCGCGACGTGCCAAAGCGGGCGGCAGTGAGGTCACGGTGGTGGGCCCGGGGAGT‑GACcaa                                                                                                                                                                                                         >  2:713422/1‑238 (MQ=255)
                                                             aaCGCGAGGCGGCAGATGTGCTGGGGCTCACACTCTATGAGCTGATGCTTCGCGCTGGCGAGGCCGCATTCCAGGTG‑TGTCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGGCGGCCTTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCcgc                                                                                                                                                                                     >  1:527373/1‑238 (MQ=255)
                                                                       ggcAGATGTGCTGGGGCTCACACTCTATGAGCTGATGCTTCGCGCTGGCGAGGCCGCATTCCAGGTG‑TGTCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GAAG‑GCTACGCGGGCGCGCGGCGTGGCAAAGCGGGGGGCCTTGTGGTGACGGTGTTGGGCCAGGGGGGC‑GGCCCACCCGTGGCGGGAGAAGCCGCGCTGGCAcggc                                                                                                                                                                          >  2:70583/1‑237 (MQ=255)
                                                                            ttgtgtgggggCTCACCCTCTTGGAGCTGATGCTCCGCGCTGGCGGGGCCGCTTTCCGGGTG‑TGTCGTTCGGCGTATCCTGACCCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGc                                                                                                                                                                      <  1:396215/231‑1 (MQ=255)
                                                                            ctgggCTGGGCCACGCAATCTATCAGCCGCTGCATCGGGCGGCCGGGACCGCATCCCAGCTG‑TGACGTTCGGCGTATCCGGACCCCCCCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGc                                                                                                                                                                      <  2:898735/234‑1 (MQ=255)
                                                                             tgggcgggggCTGACACTCTAGTGTCGGATGCTCCGCGGGGGCGGGTCCGCAACCCGGGGT‑TTTCGGTCGGCGTGTCCTGCCGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCa                                                                                                                                                                     <  2:254567/232‑1 (MQ=255)
                                                                             ggggcgggggCCCACCCTCTATGGGCTGAGGTTCCGGGGGGGGGAGG‑CGCCATCCAGGTGTTGCCGTCCGGCGAACCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCa                                                                                                                                                                     <  2:832976/232‑1 (MQ=255)
                                                                              gtgctggggcccccccctgttGAGGTGATGCTTGGCGCTGGCGGGGCCGCTTTCCAGGTG‑GGTCGTCCGGCGTAGCCTGGCGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATg                                                                                                                                                                   <  2:1134000/219‑1 (MQ=255)
                                                                              gtgCTGGGGCTCACACTCTATGAGCTGATGCTTCGCGCTGGCGAGGCCGCATTCCAGGTG‑TGTCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GAAG‑GCTACGTGGGTGCGCGACCGGCCGAAGCGGTCGGGCTTGAGGGCGCGTTGTTGGCCCCGGGGAGG‑GGCAAAACGTTGGCGGACGAGGCCGCGGTGGCGCGCGACGCCTg                                                                                                                                                                   >  2:88504/1‑239 (MQ=255)
                                                                                gCTGGGGCTCACACTCTATGAGCTGATGCTTCGCGCTGGCGAGGCCGCATTCCAGGTG‑TGTCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GGTG‑GCGACGTGGGGGCGCGCCTGGCCAAAGCGGTCGGCATTGAGGTCAAGTTGTTGGGCCAGGAGAGC‑GCCCACACGGTGCCGGGGGAGGAcggcccgggacgtggagccctgg                                                                                                                                                                 >  2:1198714/1‑218 (MQ=255)
                                                                                   ggggCTCACACTCTATGAGCTGATGCTTCGCGCTGGCGAGGCCGCATTCCAGGTG‑TGCCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGT‑GATT‑GCCACGAGGGCGCGCGGCAGGCCAAAGGTGCCGGCATTGGGGGCCCGTTGGTGGTCCCGG‑GAGCAGGGAAACTGCTGCAGGGAGAGGCCGCGCTGGCACGGGACGCCTGGGTag                                                                                                                                                              >  2:543718/1‑238 (MQ=255)
                                                                                      gCTCACACTCTATGAGCTGATGCTTCGCGCTGGCGAGGCCGCATTCCAGGTG‑TGTCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCCACGTGGTCGCGCGGCTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCCGGCGAGC‑GACAAACCCTTGCCGGAAGAGGCCGGCCTGGCAcgcggaagccgggtaaac                                                                                                                                                            >  2:1007482/1‑224 (MQ=255)
                                                                                      gCTCACACTCTATGAGCTGATGCTTCGCGCTGGCGAGGCCGCATTCCAGGTG‑TGTCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑CGTG‑GCCACGGGGGCGCGCGACTGGCCAAAACGGGCGGCGGTGAGGTGCCGGTGGTGGCCCAGGAGGGC‑GGCAAACCGCTTCCGGAAGAAGGCGCGCttggccgggaggcacgggtaaga                                                                                                                                                            >  2:391257/1‑216 (MQ=255)
                                                                                              tctAGGAGCTGATGCTGCGCGCTGGCGAGGCCGCATTCCGGGTG‑TGTCGTCCGGCGTACCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGc                                                                                                                                                   <  1:60599/239‑1 (MQ=255)
                                                                                                      cTGATGCTTCGCGCTGGCGAGGCCGCATTCCAGGTG‑TGTCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GGTG‑GCTACGTGGTCGCGCGACTGGGCCAAACGGTCGGCATTGAGGTCCCGTTGTTTGGCCCGGGGAGC‑GACCAACCGTTGCCGGGAGAGGCCCCGCCGGCGCGCGACGGATGGTTACACGCGGGGGGGGAGCTc                                                                                                                                             >  2:1064456/1‑237 (MQ=255)
                                                                                                      cTGATGCTTCGCGCTGGCGAGGCCGCATTCCAGGTG‑TGTCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGGATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGGTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGGTAAACGCGGGGGGCGGGATCCa                                                                                                                                           >  1:71242/1‑239 (MQ=255)
                                                                                                       tgttGCGTCGCGCGGGCGAGGCGGCATTGCAGGTG‑TGTCGTTCGGCGTATCCTGCCCCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCAt                                                                                                                                          <  1:368868/236‑1 (MQ=255)
                                                                                                       tGATGCTTCGCGCTGGCGAGGCCGCTTTCCAGGTG‑TGTCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCa                                                                                                                                           <  1:144431/238‑1 (MQ=255)
                                                                                                        gATGCTTCGCGCTGGCGAGGCCGCATTCCAGGTG‑TGTCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAACGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGCGGCGAGATCCATg                                                                                                                                         >  1:670893/1‑239 (MQ=255)
                                                                                                          tGCTTCGCGCTGGCGAGGCCGCATTCCAGGTG‑TGTCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGGGCGACTGGCCCAAGCGGACGGCAGTGAGGGGACGTTGTTGGCCCCGGAGAGC‑GGCAAACCGTTGGCGGGAGAGGGCGGCCTGGCCAGCGAAGCATGGGTAAAAGCgggggggggggtacgagat                                                                                                                                       >  2:807325/1‑226 (MQ=255)
                                                                                                          tGCTTCGCGCGGGCGGGGCCGCATTCCGGGTG‑TGGCGTTCGGCGTCCCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGc                                                                                                                                        <  1:961784/238‑1 (MQ=255)
                                                                                                           ggttCGCGCTGGCGGGGCCGCCTTCCGGGTG‑TGCCGGTCGGCGTACCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCtt                                                                                                                                      <  1:237365/237‑1 (MQ=255)
                                                                                                                gcgcTGGCGGGCCCGGATTCCGGGGG‑TGTCGCTGGGCGTACCCTCGCGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAat                                                                                                                                 <  1:429289/239‑1 (MQ=255)
                                                                                                                            ccGCATTCCGGGTG‑TGTCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGcc                                                                                                                     <  1:821762/238‑1 (MQ=255)
                                                                                                                                   ccAGGTG‑TCTCGTCCGGGGTTCCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATc                                                                                                               <  1:815048/237‑1 (MQ=255)
                                                                                                                                    cggttg‑tgtCGTTCGGCGTACCCGCGCGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGt                                                                                                            <  1:1035170/235‑1 (MQ=255)
                                                                                                                                     ggggtggtccGTTCGGGGTACCCGGGCGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGt                                                                                                            <  1:432838/230‑1 (MQ=255)
                                                                                                                                      gtgg‑tgtCGTTCGGCCTATCCGGCCGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTa                                                                                                           <  2:38383/235‑1 (MQ=255)
                                                                                                                                          gtgcggtggggCGTACCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGAt                                                                                                        <  2:527373/229‑1 (MQ=255)
                                                                                                                                          gggcggtgcGGCGTCTCGTGGCGCCCGCCACGGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGGTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGag                                                                                                        <  1:469369/230‑2 (MQ=255)
                                                                                                                                           tgtCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGGCGGCATTGAGGGCACGGTGTTGGCCCAGGGGAGC‑GACAAACCGGTGCCGGAAGAGGCCGCGCTGGCACGCGCAACATGGTTAAACGGGGGTGGCGAGGTCCATGGTTCGCATATTGT‑CTTGCCCggaactggcgatct                                                                                                      >  2:16338/1‑226 (MQ=255)
                                                                                                                                           tgtCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACCGGCCAAAGCGGTCGGCCTTGAGGGCACGTTGTTGGCCCCGGAGAGC‑GACAAACCCTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGGTAAACGCGGGTGGGGGGATCCATGCTTCGAATATTGT‑CTGGCCCGGCTCggggga                                                                                                         >  2:162341/1‑232 (MQ=255)
                                                                                                                                           tgtCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACCTGGGCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCCGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCCGGCACCCGAAGCCTGGTTTAAAGCGGGGGGGGGGATCCATGCTTCGCATATTTT‑CTGGCGCCAATCGGTGGATc                                                                                                       >  2:680635/1‑238 (MQ=255)
                                                                                                                                             tCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GGTG‑GCTACGTGGTCGCGCGACTGGCCCAAGCGGTCGGCCTTGAGGGCACGTTGTTGGCCCCGGGGGGC‑GACAAACAGTTGCCGGAAGAGGCCGCGCCGGCAAGCGAAGCCTGGTTAAACGCGGGGGGAGGGATCCCAGGTCTGACTATTGT‑CGTGCCCGCACTGGGAGATCTgg                                                                                                    >  2:1063677/1‑238 (MQ=255)
                                                                                                                                             tCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GGTG‑GCTACGGGGGCGCGCGACTGGCCCAAGCGGTCGGCCTTTAGGGCACGGTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGGAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGGGGGGGGAGCCCTGGCTCGGATATTGTCCTGGCCCGAA‑CGGGAGATCTgg                                                                                                    >  2:973000/1‑238 (MQ=255)
                                                                                                                                             tCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGGGCGACTGGGCAAAGCGGTCGGGCTTGGGGTCACGTTGTTGGCCCAGGGGAGC‑GACAAACCGTTGCCGGAAGAGGCGGCGCTGGCGCGCGAAGCATGGTTAAACACGGGTGGCGCGATCCACGCTCCGAGTATTGT‑CTGGCCCGAATCGGGAggacgga                                                                                                    >  2:1078789/1‑233 (MQ=255)
                                                                                                                                             tCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCCACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGGCACGGTGTTGGCCCCGGGGAGC‑GGCAAACCGTTGCCGGAAGAGGCCGCCCTGGCCAGCGAAGCACGGTTAAAAGCGGGGGGCGGGGTGCCTGCTTCGAATATTGT‑CTGGGCCCaacagggaagtcttg                                                                                                    >  2:724916/1‑226 (MQ=255)
                                                                                                                                             tCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCCACGGGGGCGCGCGGCTGGCCAAAGCGGTCGGCATTGAGGGCACGGTGTTTGCCCCGGAGAGC‑GACAAACCGTTGCCGGAAGAAGCCGCGCCGGCCCGCGGAGGCTGGGTGAAAGCGGGGGGCGAGGTGCCTGCTTCGAATTATGT‑CTGGCCCGacaccgcagggctgg                                                                                                    >  2:479331/1‑225 (MQ=255)
                                                                                                                                                 cgggCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGAttg                                                                                                 <  1:713422/236‑1 (MQ=255)
                                                                                                                                                      gtctCCTCACCCCCGCCCCTGGCTGTTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATg                                                                                           <  2:816237/236‑1 (MQ=255)
                                                                                                                                                             gccgcccgccACTGGCTGGTTGTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTGGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCgctgct                                                                                    <  1:499647/237‑1 (MQ=255)
                                                                                                                                                               cgcccgccACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAACGGGCGGGATTGAGGGCACGTTGTTGGCCCCGGGGGGG‑GGACAACCGTTTCCGGGAGAGGCCGCGCTGGCCAGCCACGCAGGGGTAAACCCGGGGGGGGGGATCCATGCTTCGCATCTTTT‑TTGGCCCGAAACCGTAGGTcctgttttttgttgcctgcctc                                                                                  >  2:50730/1‑218 (MQ=255)
                                                                                                                                                                  ccgccCCTGGCTGGTGCTGGGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGGCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTa                                                                               <  1:1011271/239‑1 (MQ=255)
                                                                                                                                                                  ccgccACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTa                                                                               <  1:1054807/239‑1 (MQ=255)
                                                                                                                                                                   cgccACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGG‑GATG‑GCCACGGGGTCGCCCGACTGGCCAAAGAGGTCGGCATTGAGGGGACGTTGGTGGCCCAGGAGGGA‑GAAAAAACGTTGCGGGAAGGGGCCGCGCTGGCACGCGAAGCACGGTTAAACGCGGGGGGCGAGAGACAGGGCTCGCGTATTGG‑CTGGGCCGCATCGGGGGATCTGAGTGTTGGTGTGATGCTCGCTa                                                                               >  2:255730/1‑238 (MQ=255)
                                                                                                                                                                           gctggTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGa                                                                                                    <  1:400405/209‑1 (MQ=255)
                                                                                                                                                                                   tgtgCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTACCGGTTTGCGGCAAgcg                                                              <  1:162341/239‑1 (MQ=255)
                                                                                                                                                                                     tgCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTACCGGTTTGCGGCAAgcgc                                                             >  1:183765/1‑238 (MQ=255)
                                                                                                                                                                                     tgCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGGGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATAGGTAGATCTGATTGTTGATGCGCTGCTCGGTACCGGGTTGCGGCAAgcgc                                                             >  1:206877/1‑238 (MQ=255)
                                                                                                                                                                                     tgCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGGTGCCGGAAGAGGGCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGGGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGTTTGTTGATGCGCTGCCTGGTACCGGTTTGCGGCAAgcgc                                                             >  2:938325/1‑238 (MQ=255)
                                                                                                                                                                                     tgCGGTCATGGTAATAACGGCGGC‑GAGG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGGCGGCATTGGGGGCACGTTGTTGGCCCAGGAGAGC‑GCCAAAACGTTGCCGGAAGAGGCCGCGCTGGCACGCGGAGCATGGTTAAACGCGGGGGGCGAGGTCCCTGCTTCGGATATTGT‑CTGGCCCGAATCGGTAGGTCTGATTGTTGATGAGCTGCTCGGTACCGGCTTGTGGCAAgggc                                                             >  2:895339/1‑238 (MQ=255)
                                                                                                                                                                                          tCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTACCGGTTTGCGGCAAGCGCCCcgcg                                                       >  1:337906/1‑239 (MQ=255)
                                                                                                                                                                                           cATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTACCGGTTTGCGGCAAGCGCCCCGCGa                                                      <  1:88504/239‑1 (MQ=255)
                                                                                                                                                                                           cATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTACCGGTTTGCGGCAAGCGCCCCGCGa                                                      <  2:608545/239‑1 (MQ=255)
                                                                                                                                                                                           cATGGTAATAACGGCGGC‑GAGG‑GCTACGTGGCCGCGCGAGTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTACCGGTTTGCGGCAAGCGCCCCGCGa                                                      <  2:55853/239‑1 (MQ=255)
                                                                                                                                                                                               gTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGGCTGGGCAAAGCGGTCGGCATTGGGGTCCCGTTGTTGGCCCCGGAGAGC‑GGCCAACCGTTGCCGGAAGAGGGCGCGCTGGGCCGCGGAGCCTGGTTAAACGCGGGGGGCGTGATCCCTGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCCCTGCTCGGTTACCGTTTTCGGCAAGCGGCCCGCGagt                                                    >  2:209474/1‑235 (MQ=255)
                                                                                                                                                                                                    aaCGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTACCGGTTTGCGGCAAGCGCCCCGCGAATCCATTa                                              >  1:277827/1‑238 (MQ=255)
                                                                                                                                                                                                      cggctgC‑GATG‑GCCACGTGGTCGCCCGACTGGCCAAAGCGGGCGGCATTGAGGGCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTACCGGTTTGCGGCAAGCGCCCCGCGAATCCATTAGcc                                           <  2:652225/239‑1 (MQ=255)
                                                                                                                                                                                                      cggcggC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTACCGGTTTGCGGCAAGCGCCCCGCGAATCCATTAGcc                                           <  1:479331/239‑1 (MQ=255)
                                                                                                                                                                                                      cggcggC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTACCGGTTTGCGGCAAGCGCCCCGCGAATCCATTAGcc                                           <  1:446529/239‑1 (MQ=255)
                                                                                                                                                                                                         cggc‑gATG‑GCTACGTGGTCGCGCGACTGGCCCAAGCGGGCGGCCTTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGGAGAGGCCCCGCTGGCACGCGAAGCATGGTTAAACGCGGGGGGCGAGATCCATGCTTCGCATATTGT‑CTTGGCCGAATCGGGCGATCTGATTGTTTATGCGCTGCTCGGTACCGGTTTGCGGCCAGCGCCCCGGGAATCCATTAGCCCGt                                        >  2:347548/1‑239 (MQ=255)
                                                                                                                                                                                                         cggc‑gATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCAcg                                                                                                                                                                            >  1:981456/1‑108 (MQ=255)
                                                                                                                                                                                                          ggc‑gATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTACCGGTTTGCGGCAAGCGCCCCGCGAATCCATTAGCCAGtt                                       >  1:852001/1‑239 (MQ=255)
                                                                                                                                                                                                                    cTACGTGGTCGCGCGATGGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTGGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCGTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTACCGGTTTGCGGCAAGCGCCCCGCGAATCCATTAGCCAGTTAATCGAc                                <  2:1046104/238‑1 (MQ=255)
                                                                                                                                                                                                                    cTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTACCGGTTTGCGGCAAGCGCCCCGCGAATCCATTAGCCAGTTAATCGAc                                <  1:889670/238‑1 (MQ=255)
                                                                                                                                                                                                                          gggcgcgcgCCGGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTACCGGTTTGCGGCAAGCGCCCCGCGAATCCATTAGCCAGTTAATCGACCACGCt                          <  1:878655/235‑1 (MQ=255)
                                                                                                                                                                                                                          ggTCGCGCGGCTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTACCGGTTTGCGGCAAGCGCCCCGCGAATCCATTAGCCAGTTAATCGACCACGCt                          <  1:411577/238‑1 (MQ=255)
                                                                                                                                                                                                                          ggTCGCGCGACAGGCCGAGGCGGGCGGCATTGAGGTCGCGGTGTTGGCCCAGGAGAGC‑GACAAACCGTGGCCGGAAAGGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTGCCGGTTTGCGGCAAGCGCCCCGCGAATCCATTATCCAGTTAATCGACCACGCt                          <  2:153561/238‑1 (MQ=255)
                                                                                                                                                                                                                             cgcgcgACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTACCGGTTTGCGGCAAGCGCCCCGCGAATCCATTAGCCAGTTAATCGACCACGCTAAt                       >  1:557999/1‑238 (MQ=255)
                                                                                                                                                                                                                             cgcgcgACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTACCGGTTTGCGGCAAGCGCCCCGCGAATCCATTAGCCAGTTAATCGACCACGCTAAt                       >  1:329558/1‑238 (MQ=255)
                                                                                                                                                                                                                              gcgcgACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTACCGGTTTGCGGCAAGCGCCCCGCGAATCCATTAGCCAGTTAATCGACCACGCTAAtt                      >  1:218400/1‑238 (MQ=255)
                                                                                                                                                                                                                              gcgcgACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTACCGGTTTGCGGCAAGCGCCCCGCGAATCCATTAGCCAGTTAATCGACCACGCTAATTc                     <  1:346761/239‑1 (MQ=255)
                                                                                                                                                                                                                              gcgcgACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTACCGGTTTGCGGCAAGCGCCCCGCGAATCCATTAGCCAGTTAATCGACCACGCTAATTc                     <  2:1112045/239‑1 (MQ=255)
                                                                                                                                                                                                                              gcgcgACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTACCGGTTTGCGGCAAGCGCCCCGCGAATCCATTAGCCAGTTAATCGACCACGCTAATTc                     <  2:852001/239‑1 (MQ=255)
                                                                                                                                                                                                                                gcgACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTACCGGTTTGCGGCAAGCGCCCCGCGAATCCATTAGCCAGTTAATCGACCACGCTAATTccc                   <  1:716527/239‑1 (MQ=255)
                                                                                                                                                                                                                                          aaaGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTACCGGTTTGCGGCAAGCGCCCCGCGAATCCATTAGCCAGTTAATCGACCACGCTAATTCCCATCCTGCGcc         <  1:1064456/239‑1 (MQ=255)
                                                                                                                                                                                                                                          aaaGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTACCGGTTTGCGGCAAGCGCCCCGCGAATCCATTAGCCAGTTAATCGACCACGCTAATTCCCATCCTGCGcc         <  1:565437/239‑1 (MQ=255)
                                                                                                                                                                                                                                            aGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGCTTGTTGATGCGCTGCTCGGTACCGGTTTGCGGCAAGCGCCCCCCGAATCCATTAGCCAGTTAGTCGACCACGCTAATTCCCATCCTGCGCCGa       >  2:702008/1‑239 (MQ=255)
                                                                                                                                                                                                                                            aGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTACCGGTTTGCGGCAAGCGCCCCGCGAATCCATTAGCCAGTTAATCGACCACGCTAATTCCCATCCTGCGCCGa       >  1:620981/1‑239 (MQ=255)
                                                                                                                                                                                                                                                 tCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTACCGGTTTGCGGCAAGCGCCCCGCGAATCCATTAGCCAGt                                        <  1:798893/201‑1 (MQ=255)
                                                                                                                                                                                                                                                 tCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTACCGGTTTGCGGCAAGCGCCCCGCGAATCCATTAGCCAGt                                        >  2:798893/1‑201 (MQ=255)
                                                                                                                                                                                                                                                 tCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTACCGGTTTGCGGCAAGCGCCCCGCGAATCCATTAGCCAGTTAATCGACCACGCTCATTCCCATCCTGCGCCGATtgtg  >  2:52978/1‑239 (MQ=255)
                                                                                                                                                                                                                                                 tCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTACCGGTTTGCGGCAAGCGCCCCGCGAATCCATTAGCCAGTTAATCGACCACGCTAATTCCCATCCTGCGCCGATtgtg  >  1:74273/1‑239 (MQ=255)
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                
AAGAAAAACCCCGTAAGTATACCACACACCGTCTGGTACGCCGACGATATCCGCCGCGGAGAACGCGAGGCGGCAGATGTGCTGGGGCTCACACTCTATGAGCTGATGCTTCGCGCTGGCGAGGCCGCATTCCAGGTG‑TGTCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGC‑GATG‑GCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGC‑GACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGT‑CTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTACCGGTTTGCGGCAAGCGCCCCGCGAATCCATTAGCCAGTTAATCGACCACGCTAATTCCCATCCTGCGCCGATTGTG  >  NC_000913/4394085‑4394561

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A