Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F28 I0 R1
|
140 |
172.9 |
3477528 |
97.9% |
3404499 |
226.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,745,396 |
A→C |
20.1% |
L198F (TTA→TTC) |
yiaN → |
2,3‑diketo‑L‑gulonate TRAP transporter large permease protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,745,396 | 0 | A | C | 20.1%
| 211.1
/ 11.0
| 136 | L198F (TTA→TTC) | yiaN | 2,3‑diketo‑L‑gulonate TRAP transporter large permease protein |
| Reads supporting (aligned to +/- strand): ref base A (49/49); new base C (2/29); total (57/79) |
| Fisher's exact test for biased strand distribution p-value = 5.52e-06 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 136 total aligned reads displayed.
CGCTCTACTGGTGCCGATGATGCGCAGCG‑CCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGCCACAGTTATTTACCGTGAAATGACCTTCGCCACACTTTGGCATGTACTCATTGGCGCGGCGAAAACCACCTC > NC_000913/3745159‑3745629
|
cGCTCTTCTGGTGCCGATGATGCGCAGCG‑CCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCACCGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTAc < 2:1445101/239‑1 (MQ=255)
gTGCCGATGATGCGCAGCG‑CCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCCGGCATGATGATGGGCGCAACCCTG‑ATGCCTACCTTGTGGGGGC‑AGGGCCGGCG‑CC‑CTACTTTACcc‑ccccccga > 2:805769/1‑235 (MQ=255)
ggcggttgatgCGCGGGG‑CCACATATCCGGGCACCCGGGCGGCGGGGTTGATGCACTCTGGCGGCATTATCGCGCCAATTTTTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGAGTATCCAGCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCAGGATGATGGGCGCAACGCTG‑ATGCTTCCCGGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTCCCC‑CGCCAGCa < 1:11314/232‑1 (MQ=255)
gCCGATGATGCGCAGCG‑CCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGGAACGCTG‑ATGCTTACCTGGTGGGGGC‑AGGCCAGTCG‑CC‑TTAATTTTCCC‑CGCCAGCaaa > 2:257757/1‑239 (MQ=255)
ccGATGATGCGCAGCG‑CCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTTCCCCTGGCATGATGATGGGGGCAAACCCG‑ATGCTTACCTGGTGGGGGC‑AGGCCCGGCGCCC‑TTAATTT‑CCC‑CCCCAGCcaaa > 1:217733/1‑239 (MQ=255)
tgatgCGCAGCG‑CCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCCTTTCCCCCGGCATGTTGGTGGGCGCCACCCTT‑ATGCTTACCCGGTGGTGGC‑CGGCCCGTCG‑CC‑CTCATTTCACC‑CACCCGCcaaaaacc > 1:1592443/1‑236 (MQ=255)
tgatgCGCAGCG‑CCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGc < 2:568413/238‑1 (MQ=255)
cgcgGCG‑CCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTGCGGCGTTTCCAGCGGATTACCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTCCCC‑CGCCAGCAAAAAGCAA‑CGa < 2:637860/238‑1 (MQ=255)
gcAGCG‑CCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATGCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCAGGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGGGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGAt < 2:504802/238‑1 (MQ=255)
ccAGCGCCCAACTATCCGGCCAACCGGGCGGGGGGGCTGTTTGCCTTTGGCGTCATTATCGCGCCAATTATTCCCCCTTCCATTCCTTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTTTTTATGGCGGGCATTGCCCCGGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCGGGGGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTCCCC‑CGCCAGCAAAAAGCAA‑CGa < 1:16363/237‑1 (MQ=255)
cg‑cCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCGTTGCCCCTCGCATGATGGTAGGCGGCACCCTGTTTGTTTACCT‑GTGGGGGG‑AGGCCCGTCGCCC‑TGATTTTCCCC‑CCCCACCAAAAAACacgctcgcgg > 1:312891/1‑230 (MQ=255)
cg‑cCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGGATGATGATGGGCGCAAACCTG‑ATGCTTACATGGGGGGGGC‑AGGCCCGTTG‑CC‑TTAATTTAACC‑CGCCCGCAAAAAGCAA‑CGATG‑CCgg > 2:587340/1‑239 (MQ=255)
cg‑cCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAgg > 2:1671820/1‑239 (MQ=255)
caccTAGCCGGGCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTAGTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGAGGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CT‑TTAATTTACCC‑CGCCAGCACAAAgaacggaatcgccag < 1:805769/235‑15 (MQ=255)
aCTATCCGGTCACCCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTCCCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATc < 2:441786/239‑1 (MQ=255)
tATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑Cg < 2:1285311/225‑1 (MQ=255)
ccGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGc > 2:1611207/1‑238 (MQ=255)
cacccGGGCGGCGGGGCTGTTTGCCTTGGGCGGCATTACCGCGCCAATTTTTCCCCCTTCCATTCCGTTAATTATCTCCGGCTTTCCCGGGGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCTGGGAATGATGAGGGGCGCACCGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTATTTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCtt < 1:1609739/236‑1 (MQ=255)
cAACCGGGCGGGGGGGCTTTTTGCCTCGGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCTTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCTTTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGTTTACCTGTTGGTGGC‑AGGCAAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCActct < 1:1307606/238‑1 (MQ=255)
aCCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGGATTTCCCCCCGGCTGGTGGTGGGGGCCACGCTG‑ATGCTTACCTGGGGGGGGCGAGGCC‑GGCG‑GC‑TTAATTTATCC‑CCCCCCCCAAAAGCAA‑CGATGCCGGGAAACTT‑GCCACTCttt > 1:709872/1‑239 (MQ=255)
aCCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCCTTGCCCCTGGGATGATGATGGGCGCCACGCTG‑ATGCTTACCTGGGGGGGGC‑AGGCCAGGCG‑CC‑TTTATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CCGGGAAACT‑GGCCCCCtttt > 2:927937/1‑239 (MQ=255)
aCCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCCGGCATGGTGATGGGGGCAACGCCG‑ATGCTTTCCTGGGGGGGGC‑AGGCCAGTCT‑CCTTTAATTTACCC‑C‑CCACCACAAAAACA‑CGATG‑CCGGGCATCT‑TGctcttata > 1:1285311/1‑234 (MQ=255)
ccGGGCGGCGGGGTTGTTTGCCTCTGGCGGGATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCTTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTCCCTGGTGGTGGC‑AGGCCATTCG‑CT‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTg < 1:991051/239‑1 (MQ=255)
gggCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCCTTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGGGGGGGG‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCCGCAAAAAGCAA‑CGATG‑CAGGGAATCT‑GGCACTCttttttt > 2:755804/1‑236 (MQ=255)
ggcggcGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGGTGGGCGGAACGCTG‑TTGCTTTCCTGGTGGGGGC‑GGGGCCGTCG‑CC‑TTTAATTACCC‑CCCACGGAAAAAGCAA‑CGATG‑CAGGGAAACT‑GGGACTCttttttt > 1:1455948/1‑235 (MQ=255)
ttGCCTCTGGCGGCATTATCGCTCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTCCCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGgcg < 2:1031288/239‑1 (MQ=255)
gCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCt < 2:1604445/239‑1 (MQ=255)
ctttGGCGGCATTACCGCGCCAATTTTTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTCCCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGt < 1:1590318/236‑1 (MQ=255)
ctctGGCGGCTTTATCGCCCCAATTATCCCCCCTTCCTTTCCTTTTTTTATCTCCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTTTTTAGGGCGGGCATTGCCCCGGGCATGATGAGGGGCGCAACGCTG‑ATGCTTACCTGGGGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTCCCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGt < 1:1163217/239‑1 (MQ=255)
ctctGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTTCCCCTGGCATGCTGATGGGCGCAAAGCTG‑CTGCTTACTTGGGGGGGGC‑AGGCCCGTCG‑CC‑TTAATTTACCC‑CGCCCCGAAAAAGAAA‑CGAGG‑CCGGAAATCG‑GGCGCTCTTTTGTTCCCGGTATATGGGGGCTGt > 1:712084/1‑239 (MQ=255)
gcggcATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTTGTGGTGGC‑AGGCCAGTCG‑CC‑TTAA‑TTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGGACTCTTTTGTGTCCGGGATCTGGGCGCTGTttctt > 2:947735/1‑238 (MQ=255)
ggcATTATCGCGCCAATTATTCCCCCTTCCATTCTGTTTATTATCGTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTAGGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGCCG‑CT‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTttcttc < 1:869226/238‑1 (MQ=255)
ggaaTTATCGCGCAAATAATCCCCCCTTCCATTCCGTTTATTATCTCCGGCTTTTCCAGCGGATTACCCATCGGTAACTTGTTTAGGGGGGGCATTGCCCCGGGCATGATGATGGGCGCACCGCTG‑ATGCTTACCTGGGGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTCCCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTttcttc < 1:257757/235‑1 (MQ=255)
aTTATCGCCCCATTTATTCCCCCTTCCATCCCTGTTATTATCGTCGGCGTTCCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGCCGCAAGGCGG‑ATGCTTACCTGGGGGTGGC‑GGCCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGt < 1:927937/239‑1 (MQ=255)
cAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTTTTTATGGCGGGCATTGCCCCTGGCATAATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGgcg < 2:720412/215‑1 (MQ=255)
aaTTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTCCCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGgcg < 2:563737/214‑1 (MQ=255)
ttattCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGc < 2:1099409/239‑1 (MQ=255)
cccccTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGtt > 2:1105037/1‑239 (MQ=255)
cccTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTTCCCCTGGCACGATGATGGGCGCAACGCTG‑ATGCTTACCTGGGGGGGGC‑AGGGCAGTCG‑CC‑TTATTTTACCC‑CCCCAGCCAAGAGCAC‑AGCGG‑CAGGGAAACT‑GCCCCTCTTTTTTTTCCGCGAACTCGGCGCTGTTTCTTccccttctcttatacaaatctcac > 1:720412/1‑216 (MQ=255)
ccTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTTCCCCTGGCATTATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CCCCCGCAAAAAACAA‑CGATG‑CAGGGAATCT‑GGCACTCTTTTGTTTCCGGTATCTTGGCGCTGTTTCTTccctttctcttttacccctcctacg > 1:563737/1‑215 (MQ=255)
ccTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCGGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTCCCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGgc < 2:1514548/203‑1 (MQ=255)
ttCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCGGGCATGATGAGGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCt < 2:402890/239‑1 (MQ=255)
tCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCCTTGCCCCTGGCATGATGATGGGCGCAACGCTT‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑CTAATTTACCC‑CGCCAGCAAAAAGGAA‑CGATG‑CAGGAAATCT‑GGCCCTCTTTTGTCTCCGGTCTCCTGGCGCTGTTTCTTCCAGTCATCCTTATTGGC‑GGGctttgtc > 1:1483657/1‑234 (MQ=255)
tCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCCGGCATGATGATGGGCGCAACGCTT‑ATGCTTACCTGGGGGGGGC‑AGGGCAGTCG‑CC‑TTAATTTACCC‑CCCCAGCAAACAACAA‑CGATA‑GAGGGAAACA‑GGCACTCTTTTGTTTCCGCGATCGCGGCGCTCGTTTTTTCTGACATCATTATTGGT‑GGGtgttgtt > 1:418476/1‑232 (MQ=255)
aTTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCCGCCAAAAGCAA‑CGAGG‑CGGGAAATCT‑GGCACTCTTTTGTCTCCCGTATCTTGGCGCGTTTTCTTCCAGTCATCATTCTTGGC‑gggggtttctccc > 1:1242858/1‑228 (MQ=255)
ttCTGTTTTTTATCTTCGGCGTTTCCAGCGTATTTTCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGGGGTGGC‑AGGCCAGTCG‑CT‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGc < 1:1671820/239‑1 (MQ=255)
ttCCTTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTCCCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGc < 2:1280062/239‑1 (MQ=255)
ttCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGc < 2:1178823/239‑1 (MQ=255)
ttCCGTTTATTATCTGCGGCGTTCCCAGCGATTTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑GGGCCAGTCT‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGc < 2:388806/239‑1 (MQ=255)
ttCCGTTTATTAGCTGCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGc < 2:609655/239‑1 (MQ=255)
tgccGTTGATTATCTTCGGCGTTCCCAGCGGATTATCCATCAGTAGGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGc < 1:513561/237‑1 (MQ=255)
tgccGTGTATTATCTGCGGCTTTGCCGGCGGATTACCCATCAGGAGGTTGTTTAGGGGGGGCATTGCCCCTGGCATGATGATGGGCGCACCGCTG‑ATGCTTCCCTGGTGGGGGC‑GGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCG‑CCGGc < 1:1173110/237‑1 (MQ=255)
tcccGTTTATTATCTTCGGCGTTTCCGGCGGATTATCCATCAGTAGGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGTCGCAACGCTG‑ATGCTTACCTGGTGGGGGC‑AGGCCAGTCG‑CC‑TTAATTTCCCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGc < 2:1681760/237‑1 (MQ=255)
cGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCTTGATGATGGGCGCAACGCTG‑ATGCTTCCCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTCCCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGCCTg < 2:1452978/239‑1 (MQ=255)
cGTTTATTATCTTCGGCGTTTCAAGGTGATTAGCCATCAGTAAGCGGTTGATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTATTTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGCCTg < 2:981799/239‑1 (MQ=255)
tttATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGGATTGCCGCGCGTATGAGCATGGGCGCAATCCTG‑ATGCTTACCCGGGGGGGGC‑AGGACAGACG‑CC‑TTAAGTTAACC‑CGCCCGCAAAAAGCAACCAAGG‑CCGGAAA‑CT‑CGGACCTTTTTGTTCCCGGCAGCGAGGAGCTTTTTTTTCCTGCCAACATTTTTGGT‑GGGttttttctgccggattg > 1:261811/1‑225 (MQ=255)
tttATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTTTCTCCGGTATCTGGGCGCTGTTTCTTCCCGTCCTCATTATTGGC‑GGGTTTTGCT‑CCCGCCTGtt > 2:1714393/1‑239 (MQ=255)
ttattaTCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGCCTGtt < 2:312891/238‑1 (MQ=255)
tattatCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTTCCCCCGGCATGATGATGGGCGCCACGCTG‑ATGCTTACCTGGGGGTGGC‑AGGGCCGTCG‑CC‑TTCATTTAACC‑CCCCCACACAAAACAA‑CCAAG‑GAGGAAAACT‑CGCACTCCTTTTTTTCCCGTATCAGGGCGCCGCTTCTTCCCGTCATCATTTTTTGC‑GGGGTTTTCT‑CCGCTCTGtttt > 1:1042874/1‑238 (MQ=255)
tatCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTCCCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGCCTGTTTAccc < 2:251703/239‑1 (MQ=255)
cTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCCTTTGCCCCGGAATGATGATGAGCGCAACGCTG‑ATGCTTTCCCGGTGGGGGA‑GGGCCAGAAG‑CC‑TTATTTTACCCACGCC‑GCAACAAATAA‑AGATG‑CAAGGAATATCGGCAAT‑TTTTGTCCCACGCATCATGGATGAGTTTCTTTAAGTCATCATTAATTGC‑GGGtttgtgtccgccacgtgttatcta > 1:990790/1‑217 (MQ=255)
tggccGTTTCCAGCGGATCATCCCGCACGACCCTGTTTACGGCGGGCATTGCCCATGGTATGATGGTGGGAGCACCCCTG‑TCGCTTCCCTGGTGCTGGC‑AGGCATGTCG‑CC‑TTAATTGACCC‑CGCAAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGCCTGTTTACCCCTAcc < 1:1239046/235‑1 (MQ=255)
cGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTCCCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGCCTGTTTACCCCTACCg < 2:1592443/239‑1 (MQ=255)
aTTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGGGCAACGCTG‑ATGCTTACCTGGTGGGGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CCCCAGCAAAAAACAA‑CGATG‑CAGGAAATCT‑TGCACTCTTTTTTCTCCGGTATCTGGGCGCTGTTTCTTTCAGTCATCATTATTGGCGGGGTTTTGTC‑CCGCCCTGTTTTccctcccccacacacgggccggg > 1:1616447/1‑219 (MQ=255)
aTTACCCATCAGTAGGCTGTTTAGGGCGGGCGTTCCCCTTGGAATGAGGAGGGGCCCACCGCGG‑ATGCTTACCTGGTGGTGGA‑CGGCCAGTCG‑CC‑TT‑ATTTCCCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTtg < 1:947735/238‑1 (MQ=255)
aTCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCttt < 2:534163/239‑1 (MQ=255)
aGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGGATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGGTTTGCTCCCGCCCGGTTTTCCCCCCCCCAACCGGGGGCGGTtgtggttttttttc > 2:45040/1‑226 (MQ=255)
aGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGGGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CCCCCGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTTGCGGGGTTTCGTC‑CCGGCCGTTTTTCCCCCCCCCCACCCGGGGcccggctgctgtttcttc > 1:534163/1‑222 (MQ=255)
aGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGGGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CCCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGGTTTTCTCCCGGCCTTTTTACCCCCCCGCAAACCGGGGccctgctgcctttttttc > 2:134559/1‑222 (MQ=255)
ttATGGCGGGCATTGCCCCTGCCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGtt < 2:1483657/238‑1 (MQ=255)
agggCGGGCTTTCCCCCTGGCATGATGAGGGGCGCAACCCTG‑ATGTTTACCGGGTGGTGGC‑AGGCCAGTCG‑CT‑TTAATTTCCCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGt < 1:275721/237‑1 (MQ=255)
ggggCGTTGCCCCTGGCATGATGATGGGCGAAGCGCTG‑AGGCTTACCGGGTGGTGGC‑AGGCCAGCCG‑CC‑TTAATTTCCCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGc < 1:373881/237‑1 (MQ=255)
cGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTCCCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTCCCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGc < 2:1519552/238‑1 (MQ=255)
cGGGCATTGCCCCTGGCATGATGAGGGGCGCAACGCGG‑ATGCTTACCTGGGGGTGGC‑AGGCCAGTCG‑CC‑TAAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGc < 2:37002/238‑1 (MQ=255)
gggCCTTGCCCGTGGCATGATGATGGGCGCTACGCTG‑ATGCTTGCCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTCCCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGCca < 1:135551/239‑1 (MQ=255)
ggCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGCca < 2:506409/238‑1 (MQ=255)
ggCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTTGCT‑CCGGCCTGTTTTCCCCCTCCGAAGCCCGGGCCGCTGCTGCTTTCTTTGCGCCGTTTTTGGCCGCAATTATTTAACg > 1:351425/1‑239 (MQ=255)
gCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTTGCT‑CCGGCCTGTTTTCCCCTACCGAAGCCGGGGCCGTTGCTGCTTTTCTTTCGCTGTTTGTTGCCACATTTTTTTACCGt > 2:857362/1‑239 (MQ=255)
atgatgGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTTGCT‑CCGGCCCGTTTACCCCCACCGAAACCGGGGCCGGTGCTGCTTTTTTTTCGCTGTTTGTGGCCCCCGCTATTTACCCTGaaaa > 1:1181551/1‑238 (MQ=255)
atgatgGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCgg > 1:1673113/1‑161 (MQ=255)
atgatgGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCgg < 2:1673113/161‑1 (MQ=255)
atgatgGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGCCACAGTTATTTACCGTGaaa < 1:1105037/238‑1 (MQ=255)
tgGGCCCACCGCTT‑ATTCTTCCCGTGTTGTGGC‑AGGCCAGTCG‑CT‑TTAATTTCCCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGCCACAGTTATTTACCGTGAAATGAc < 1:760892/238‑1 (MQ=255)
ggggCCCAACGTTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGCCG‑CC‑TTAATTTCCCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGCCACAGTTATTTACCGTGAAATGAc < 1:45040/237‑1 (MQ=255)
gggCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGc < 1:822963/142‑1 (MQ=255)
gggCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGc > 2:822963/1‑142 (MQ=255)
gggCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGCCTGTTTA‑CCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGTGCTGTTTGTCGCca > 2:45093/1‑214 (MQ=255)
gggCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGCCTGTTTA‑CCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGTGCTGTTTGTCGCca < 1:45093/214‑1 (MQ=255)
gggCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGGTTTGCT‑CCTGCCCTTTTTTCCCTCCCCACACCGGGGGCGCTTGTGCTTTCTTTGTGGTGTTTTTCTCCCCCGTTATTTATCGTTGAATGAcca > 1:561611/1‑238 (MQ=255)
cgcAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTTATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGtt > 1:1582897/1‑144 (MQ=255)
aaCGCTG‑ATGCTTACCTGGTGGGGGC‑AGGCCAGTCG‑CC‑TTAATTTCCCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGCCACAGTTATTTACCGTGAAATGACCTTCGCca < 1:506240/239‑1 (MQ=255)
gCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTTGCT‑CCGGGCCGTTTTCCCCCACCCAAGCCGGGGCCGTTGCTGCTTTCTTTGCGCTGTTTTTCGCCCCAGTGTTTTATCGTGGAATGACCCTTGCccca > 1:89610/1‑238 (MQ=255)
g‑ATGCTTCCCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGCCACAGTTATTTACCGTGAAATGACCTTCGCCACACttt < 2:82791/239‑1 (MQ=255)
tggCTTACCGGGTGGTGGC‑GCGCCAGTCG‑CC‑TTAATTCACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGCCACAGTTATTTACCGTGAAATGACCTTCGCCACACttt < 1:857362/236‑1 (MQ=255)
aTGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGGTTTGCT‑TCCGCCTGGTTTTCCCCACCGCAACCGGGGGCCGTGGTGCTTTCTTTTGGCTGTTTTTTGCCACCGTTATTTTCCCTGAAATGACCCTCTCCCCACtttt > 1:1678259/1‑238 (MQ=255)
tggtggC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGGTTCGCT‑CCGGCCTGTTTATCCCTACCCAAACCGGGGCCGTTGCTGCTTTCTCTGCGCTTTTTTTTTCCCCAGCTATTTGCCTTGAAATTACCTTCTCCACACTTTTGCATGTagctat > 1:1237537/1‑234 (MQ=255)
c‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGCCACAGTTATTTACCGTGAAATGACCTTCGCCACACTTTGGCATGTACTCATTGgcg < 2:89610/238‑1 (MQ=255)
cG‑CT‑TTATTTTCCCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGCCACAGTTATTTACCGTGAAATGACCTTCGCCACACTTTGGCATGTACTCATTGGCGCGGCGAAAac < 1:359532/239‑1 (MQ=255)
cG‑CC‑TTAATTTCCCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGCCACAGTTATTTACCGTGAAATGACCTTCGCCACACTTTGGCATGTACTCATTGGCGCGGCGaaa < 2:351425/237‑1 (MQ=255)
tAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGCCACAGTTATTTACCGTGAAATGACCTTCGCCACACTTTGGCATGTACTCATTGGCGCGGCGAAAACCACCt < 2:752658/239‑1 (MQ=255)
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CGCTCTACTGGTGCCGATGATGCGCAGCG‑CCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCC‑CGCCAGCAAAAAGCAA‑CGATG‑CAGGAAATCT‑GGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGC‑GGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGCCACAGTTATTTACCGTGAAATGACCTTCGCCACACTTTGGCATGTACTCATTGGCGCGGCGAAAACCACCTC > NC_000913/3745159‑3745629
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
