Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A7 F28 I0 R1 140 172.9 3477528 97.9% 3404499 226.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,114,889 A→C 12.4% G230G (GGT→GGG)  glpX ← fructose 1,6‑bisphosphatase II

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,114,8890AC12.4% 434.9 / 5.7 160G230G (GGT→GGG) glpXfructose 1,6‑bisphosphatase II
Reads supporting (aligned to +/- strand):  ref base A (86/47);  new base C (2/22);  total (88/72)
Fisher's exact test for biased strand distribution p-value = 1.86e-07
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 160 total aligned reads displayed.

GGATCAGCAGCGTTTCGGTAGTCGCGATATTGCCTTTGCGGCTAATGCCTTCCAGCAGATCGCCTTTGGTAATACCGGTGGCA‑GAGAAGATGACGTTATCGCTGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGTGGCGTGGTTTAGCCAGAATCGTTACCGTCAGTTCGCTCA  >  NC_000913/4114654‑4115118
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                     
ggATCCGCAGCGTTTCGGTAGTCGCGATATTGCCTTTGCGGCTAATGCCTTCCAGCAGATCGCCTTTGGTAATACCGGTGGCA‑GAGAAGATGACGTTATCGCTGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCg                                                                                                                                                                                                                                    <  1:918721/239‑1 (MQ=255)
ggATCAGCAGCGTTTCGGTAGTCGCGATATTGCCTTTGCGGCTAATGCCTTCCAGCAGATCGCCTTTGGTAATACCGGTGGCA‑GAGAAGATGACGTTATCGCTGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGAcc                                                                                                                                                                                                                                     <  2:1349907/238‑1 (MQ=255)
     agcagacttcctgttggcgcgATATTGCTGTTGCGGCTAATGACTTCCAGCAGATCGCCTTTGGTAATGCCGGTGGCA‑GAGAAGATAACGTCATCGCTGCGCGCCGTATCGCCGAGGCGC‑AATTATTTACCGGGTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCACCTGCGTGCCAATGCGACGATTCTCTTCGGTGTCGCCTTTGACGTCATGACGCGCCAGCAGACTTCCGTTc                                                                                                                                                                                                                                 <  1:1322000/220‑1 (MQ=255)
        agcGTTTCGGTAGTCGCGATATTGCCTTTGCGGCTAATGCCTTCCAGCAGATCGCCTTTGGTAATACCGGTGGCA‑GAGAAGATGACGTTATCGCTGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATg                                                                                                                                                                                                                              <  1:582381/237‑1 (MQ=255)
        agcGTTTCGGTAGTCGCGATATTGCCTTTGCGGCTAATGCCTTCCAGCAGATCGCCTTTGGTAATACCGGTGGCA‑GAGAAGATGACGTTATCGCTGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATg                                                                                                                                                                                                                              <  2:1000399/237‑1 (MQ=255)
           gTTTCGGTAGTCGCGATATTGCCTTTGCGGCTAATGCCTTCCATCAGATCGCCTTTGGTAATACCGGTGGCA‑GAGAAGATGACGTTATCGCTGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTc                                                                                                                                                                                                                            <  2:811352/236‑1 (MQ=255)
            tttCGGTAGTCGCGATATTGCCTTTGCGGCTAATGCCTTCCAGCAGATCGCCTTTGGTAATACCGGTGGCA‑GAGAAGATGACGTTATCGCTGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGc                                                                                                                                                                                                                          >  1:1560508/1‑237 (MQ=255)
            tttCGGTAGTCGCGATATTGCCTTTGCGGCTAATGCCTTCCAGCAGATCGCCTTTGGTAATACCGGTGGCA‑GAGAAGATGACGTTATCGCTGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGc                                                                                                                                                                                                                          >  1:1457781/1‑237 (MQ=255)
            tttCGGTAGTCGCGATATTGCCTTTGCGGCTAATGCCTTCCAGCAGATCGCCTTTGGTAATACCGGTGGCA‑GAGAAGATGACGTTATCGCTGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCa                                                                                                                                                                                                                        >  1:8790/1‑239 (MQ=255)
                ggTAGTCGCGATATTGCCTTTGCGGCTAATGCCTTCCAGCAGATCGCCTTTGGTAATACCGGTGGCA‑GAGAAGATGACGTTATCGCTGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTa                                                                                                                                                                                                                    <  2:1317779/239‑1 (MQ=255)
                ggTAGTCGCGATATTGCCTTTGCGGCTAATGCCTTCCAGCAGATCGCCTTTGGTAATACCGGTGGCA‑GAGAAGATGACGTTATCGCTGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTa                                                                                                                                                                                                                    <  2:1071596/239‑1 (MQ=255)
                     gcgcgATATGGCCTTTGCGGCTAATGCCTCCCAGCAGATCGCCTTTGGTAATACCGGTGGCA‑GAGAAGATGACGTTATCGCTGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATgcg                                                                                                                                                                                                               <  1:182515/238‑1 (MQ=255)
                      cgcgATATTGCCTTTGCGGCTAATGCCTTCCAGCAGATCGCCTTTGGTAATACCGGTGGCA‑GAGAAGATGACGTTATCGCTGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATgcg                                                                                                                                                                                                               <  1:634859/238‑1 (MQ=255)
                               gCCTGTGCGGCAAATGCCTCCCAGCAGATCGCCTTGGTTAATCCCGTGGGCA‑AAGAAGATGACTTTATCGCTGCGCGCCATATCGCCAAGGCGC‑AATACTTCACCGGCTTCGATCCCCTTCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCTTTGTCGCCTTTGACTTCATGACGCGCCAGCAGACGACCTTTCATGTCGCCATCTAATGCGCGGATCAccg                                                                                                                                                                                                     <  1:181156/239‑1 (MQ=255)
                                ccTTTGCGGCTAATGCCTTCCAGCAGATCGCCTTTGGTAATACCGGTGGCA‑GAGAAGATGACGTTATCGCTGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTa                                                                                                                                                                                                                    <  1:1297084/223‑1 (MQ=255)
                                ccTTTGCGGCTAATGCCTTCCAGCAGATCGCCTTTGGTAATACCGGTGGCA‑GAGAAGATGACGTTATCGCTGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTa                                                                                                                                                                                                                    >  2:1297084/1‑223 (MQ=255)
                                   ttGCGGCTAATGCCTTCCAGCAGATCGCCTTTGGTAATACCGGTGGCA‑GAGAAGATGACGTTATCGCTGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACcgccgc                                                                                                                                                                                                 >  2:330214/1‑239 (MQ=255)
                                   gtGCGGTTGATGGCGTCCAGCAGTACGCTTTGGGTAACACGGGTGGGA‑GAGAAAATGGTGTTAGCGCGGCGCGCCATAGCGCCCCGGCGA‑AATCCTTTGCCGGCTTCGATGCCCTGCCCTTTG‑CGGCGGCCCAGCCCCTGCCCGCCAATGCGCCTATTCTCTTCGTGGCCGCCTTGGCCGTCAGGACGCGCCAGCAGACGCTCGTTCATGTCGCCATCTAATGCGCGGATCACcgccgc                                                                                                                                                                                                 <  1:28682/238‑1 (MQ=255)
                                    tGCGGCTAATGCCTTCCAGCAGATCGCCTTTGGTAATACCGGTGGCA‑GAGAAGATGACGTTATCGCTGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCa                                                                                                                                                                                                >  2:1293479/1‑239 (MQ=255)
                                     gCGGCTAATGCCTTCCAGCAGATCGCCTTTGGTAATACCGGTGGCA‑GAGAAGATGACGTTATCGCTGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAg                                                                                                                                                                                               >  2:631630/1‑239 (MQ=255)
                                          tAATGCCTTCCAGCAGATCGCCTTTGGTAATACCGGTGGCA‑GAGAAGATGACGTTATCGCTGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCCCGGATCACCGCCGCAGAAACt                                                                                                                                                                                          >  1:1415191/1‑239 (MQ=255)
                                                  tCCAGCAGATCGCCTTTGGTAATACCGGTGGCA‑GAGAAGATGACGTTATCGCTGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCtt                                                                                                                                                                                   >  2:716908/1‑238 (MQ=255)
                                                   ccaggcgagcGCTTTTGTTAATCCGGGTGCCA‑GAGAGGATGACTTTATCGCTGCCCGCCATTGCGCCCAGGCGC‑AATCCTTTCCCGCTTTCGATGCCCATCGTTTTC‑CGGCGTGCCAGCTCCGGCTCGCCAATGCGACGATTCTCTTCGTGGTCGCCTTTGACGCCATGCCGCGCCAGCAGACGTCCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTcc                                                                                                                                                                                 <  1:1086213/230‑1 (MQ=255)
                                                       cagATCGCCTTTGGTAATACCGGTGGCA‑GAGAAGATGACGTTATCGCTGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCgtc                                                                                                                                                                              >  2:1138043/1‑236 (MQ=255)
                                                        gtgtcccgtttGGTACCACCGGTGCAA‑GGAAAGAAGCCGTTCCGCCTGCCCCCCATATCGCCCGGGCCC‑AATATTTTACCGGCTTCGATCCCCATCTCTTTG‑CAGCGTGCCGCCCCCTCCTCGCCAAGGCGCGGATTCTCTTCGTGGTCCCCTTTGCCGCCAGGACGCCCCAGCAGACGACCGTTCATGTCGCCATCTACTGCGCGGACCACCGCCGCAGAAACTACGCCTTCCGgcgc                                                                                                                                                                            <  1:1316419/231‑1 (MQ=255)
                                                          aTCGCCTTTGGTAATACCGGTGGCA‑GAGAAGATGACGTTATCGCTGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACCTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTCCGCCTTCCGgcgcg                                                                                                                                                                           >  1:1298095/1‑238 (MQ=255)
                                                           tCGCTTTTGGTAACACGGGTGGAA‑GAGAAGATGACTTTCTCGCTGCGCGCCTTACCGCCCAGGCGC‑AATCCTTTCCCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCCCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGCCAGGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGgcgc                                                                                                                                                                            <  1:1251402/236‑1 (MQ=255)
                                                           tCGCCTTT‑GTAATACCGGGGGCAGGAAAAGATGACGTTGCCGCGGCGCCCAATATCCCCGGGGCCC‑AATCTTTTCCCGGTTTCGATCCCCTTCGCTTTG‑CGGCGGGCCCGCTCCTCCTCGCCATTGGGACGTTTCTCTGCGTTGTCGCCTTTGACGTCATGACCCGCCGCAAGCCGACCGTTAATGCCCCCATCTAATGCGCGGATCCCCGCCGCAGAAACTACGCCTTCCGgcgcgc                                                                                                                                                                          <  1:1368804/238‑1 (MQ=255)
                                                             gctttgggaaaTGCCGGGGGCA‑GAGAAGAGGCCTTTACCGCTGCGCGCCTTATCGCCCGGGCGC‑AATCCTTTCCCGGCTTCGATGCCCATCGCTTGG‑CAGCGGGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCTTTTGACGTCATGACGCGCCAGCAGACGCCCGTTCATGTCGCCATCTAATGCGCGGTTCACCGCCGCAGAAACTACGCCTTCCGGCGCGccac                                                                                                                                                                       <  1:1151452/230‑1 (MQ=255)
                                                             gCCTTTGGTAACCCCGGTGGCA‑GAGAAGATGCCTTTACCGCTCCCCCCCATACCGCCCAGGCGC‑AATACTTTCCCGGCTTCGTTGCCCTTCGCTTTG‑CGGCGGGCCACCCCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCTTTTGCCGCCAGGACGCGCCAGCAGACGCCCTTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGccac                                                                                                                                                                       <  1:219645/239‑1 (MQ=255)
                                                             cccTTGGGAAATCCCGGTGGAG‑GAAAAGATGACGTTACCGCGGCCCCCCATATCCCCCGGGCGC‑ATTACTTCACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCACCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCCCCAGCAGACGCCCGTTCATGCCGCCATCTAAGGCGCGGACCACCGCCGCAGAAACTACGCCTTCCGGCGCGccac                                                                                                                                                                       <  1:821252/238‑1 (MQ=255)
                                                                tttGGTATTCCCGGGGGCA‑GAAAAGTGCCCTTTACCCCTGGCCCCCATACCCCCCAGGCGA‑AATCTTTTCCCGGCTTCGAGCCCCTTCGTTTTG‑CGGCGTGCCAGCTCTTGCCCGCCAAGGCGCCGTTTCTCTTGGTTGTCGCCTTGGACGTCAGGACGCCCCAGCAGACGACCGTTCAGGCCGCCATCAAATGCGGGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCaa                                                                                                                                                                    <  1:225001/239‑1 (MQ=255)
                                                                 ttGGTAATACCGGTGGCA‑GAGAAGATGACGTTATCGCTGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAAt                                                                                                                                                                   >  2:1151452/1‑239 (MQ=255)
                                                                         aCCGGTGGCA‑GAGAAGATGACGTTATCGCTGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTACTTCGCGGATCCCCGCCGCAGCAACTACGCCTTCCGGCCCGCCACCCATCCCTTACa                                                                                                                                                           >  1:1049430/1‑239 (MQ=255)
                                                                         aCCGGTGGCA‑GAGAAGATGACGTTATCGCTGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTAc                                                                                                                                                            >  2:433371/1‑238 (MQ=255)
                                                                         aCCGGTGGCA‑GAGAAGATGACGTTATCGCTGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACa                                                                                                                                                           >  2:490474/1‑239 (MQ=255)
                                                                             gTGGCA‑GAGAAGATGACGTTATCGCTGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCCTCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCAc                                                                                                                                                       >  2:1353949/1‑239 (MQ=255)
                                                                             gTGGCA‑GAGAAGATGACGTTATCGCTGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCAc                                                                                                                                                       >  2:284074/1‑239 (MQ=255)
                                                                             gTGGCA‑GAGAAGATGACGTTATCGCTGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCAc                                                                                                                                                       >  2:4106/1‑239 (MQ=255)
                                                                              tGGCA‑GAGAAGATGACGTTATCGCTGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACg                                                                                                                                                      >  2:271099/1‑239 (MQ=255)
                                                                               ggCA‑GAGAAGATGACGTTATCGCTGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGt                                                                                                                                                     >  2:241434/1‑239 (MQ=255)
                                                                                            gACGTTATCGCTGCGCGCCATATCGCCCAGGCGC‑AATCCTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGccacca                                                                                                                                                                     <  2:1068704/211‑1 (MQ=255)
                                                                                            gACGTTATCGCTGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGccacca                                                                                                                                                                     >  1:1068704/1‑211 (MQ=255)
                                                                                             gctttctccccgccccccATACCGCCCAGGCAA‑AATCCTTTCCCGGCTCCGATGCCCATCCTTTGG‑CAGCGTCCCAGCACCTGCCCGCCAATGCGCCGATTCTCTTCGTTGTCGCTTTTGACGCCAGGCCGCGCCAGCAGACGACCTTTCATGTCGCCATCAAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTc                                                                                                                                        <  1:786120/223‑1 (MQ=255)
                                                                                              cGTTCTCCCTGCGCCCCTGCTCGCCCGGGCCC‑ATTTCTTTCCCGGTTTCGTTCCCCACCGCTTTG‑CAGCGGGCCAGCTCCTCCGCGCCAATGCGACGCTTCTCTTCGTTGTCGCTTTTGACGTCATGACGCGCCAGCAGGCGCCCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTc                                                                                                                                        <  1:700004/238‑1 (MQ=255)
                                                                                              cGTTATGGCTGCGCGCCATACCGCCCAGGCGC‑AATTCTTTCCCGGCTTCTGTGCCCCTCGCTTTG‑CAGCGTGCCAGCCCCTGCTCGCCAATGCGACTATTCTCTTCGTGGTCGCCTTTGACGTCAGGCCGCCCCAGCAGACGACCGTTCTTGTCGCCCTCTAATGCGGGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTc                                                                                                                                        <  1:252742/238‑1 (MQ=255)
                                                                                                    ctcTGCGCGCCATGCCGCCCAGGCGA‑AATCCTTTCCCGGCTTCGATGCCTGCCGCGTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGCCGTGTCTCTTCGTTGTCGCCTGTGACGCCATGACGCGCCAGCAAACACCCGTTAATTCCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATa                                                                                                                                 <  1:484922/237‑1 (MQ=255)
                                                                                                    cgcgccgcccccacccGCCCGGGCGA‑AAGCTTTTACCGGCTTGGTTGCCCATCGCTTTG‑CAGCGGGCCAGCCCCTGCCCGCAAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCAGGCCGCCCCAGCGGACGCCCGTTCATGTCGCCATCTAAGGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATa                                                                                                                                 <  1:417279/224‑1 (MQ=255)
                                                                                                    cgcagccccctcttccccccAGGCAC‑AATCGTTTACCGGTTTCTGTGCCCATCCTTTTG‑CAGCGTGCCCGCTCCCGCCCGCCAGTCCGACGATTCTCTCTGTTCCCGCCTTTCACGCCGTGCCGCCCAGGCAGACGACGGTTAATTTCCCCATCTAATGCGCGTATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATa                                                                                                                                 <  1:1685099/222‑1 (MQ=255)
                                                                                                    cGCTGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATa                                                                                                                                 <  2:8790/239‑1 (MQ=255)
                                                                                                    cGCTGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATa                                                                                                                                 <  2:496995/239‑1 (MQ=255)
                                                                                                     cgcggcccccactatcccccGGCGCAAATCCTTTCCCGCTTTCGATGCCCTCCGCTTTG‑CAGCGTCCCAGCCCCTGCCCCCAAATGCCACGATTCTCTTCGTTGCCCCTTTGGACGTCATGCCGCGCCAGCAGACGCCCGTTCATGCCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATa                                                                                                                                 <  1:271099/223‑1 (MQ=255)
                                                                                                       tGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAg                                                                                                                              >  1:314012/1‑239 (MQ=255)
                                                                                                                          gcgc‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACTGGTGAGAATTGAGGCCGCa                                                                                                            >  1:1158052/1‑238 (MQ=255)
                                                                                                                          gcgc‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCa                                                                                                            >  2:1568647/1‑238 (MQ=255)
                                                                                                                                aTACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAAAGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTc                                                                                                       >  2:1138847/1‑238 (MQ=255)
                                                                                                                                     ttACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGt                                                                                                  >  1:942311/1‑238 (MQ=255)
                                                                                                                                     ttACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGCACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGt                                                                                                  >  1:725458/1‑238 (MQ=255)
                                                                                                                                          gtcTTCGATGCCCCT‑GCTTTGCCAGCGCCCCTGCCCCTGCTCGCCAATCAGCCATTTCTCTTGGTTGTCGCCTTTGACGTCATGCCGCGCCAGCAGACGACCGTTCTTGCCGCCATCTAAGGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGaa                                                                                            <  1:1264433/237‑1 (MQ=255)
                                                                                                                                           gCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATTCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCCAGCAACCAATACCGTAAAGCACGTCCACTTCACTGTCTGGCCTACAGGTCAGAATTGAGGCCGCCACGTCGCCGTCCGGAAt                                                                                           >  1:794238/1‑239 (MQ=255)
                                                                                                                                           gCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCt                                                                                                                                           <  2:1208076/191‑1 (MQ=255)
                                                                                                                                           gCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAAt                                                                                           >  2:137843/1‑239 (MQ=255)
                                                                                                                                           gCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAAt                                                                                           >  1:112433/1‑239 (MQ=255)
                                                                                                                                             ttCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATa                                                                                          >  2:1381613/1‑238 (MQ=255)
                                                                                                                                             ttCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATa                                                                                          >  2:1510251/1‑238 (MQ=255)
                                                                                                                                              gcggtgcccctttcTTTG‑CGGCGGGCCAGCGCCTGCCCCCCAGTGCGACGATTCGTTTCGTTGTCGCCTTTGACGTCAGGCGGCGCCACCGGACGACCGTTCATGTCGCCTTCTAATGCGCGGACCCCCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGc                                                                                        <  1:1137640/226‑1 (MQ=255)
                                                                                                                                                       accgttttG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATAcgcg                                                                               <  2:219003/234‑1 (MQ=255)
                                                                                                                                                       aTCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGCGGCCGCAACGTCGCCGTCCGGAATAGCCAATAcgcg                                                                               >  1:989/1‑239 (MQ=255)
                                                                                                                                                         cGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGt                                                                              >  2:166757/1‑238 (MQ=255)
                                                                                                                                                              tG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCg                                                                        >  1:1004403/1‑239 (MQ=255)
                                                                                                                                                              tG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCg                                                                        >  2:1011140/1‑239 (MQ=255)
                                                                                                                                                              tG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCg                                                                        >  1:279969/1‑239 (MQ=255)
                                                                                                                                                                   gCGGGCCAGCTCCTGCTCCCCAATGCGACGATTCTCTTGGTTGTCGCCTTTGCCGTCAGGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGt                                                                     <  2:967911/238‑1 (MQ=255)
                                                                                                                                                                    cGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCAATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCCCCAATa                                                                                                                                                                  >  1:129228/1‑144 (MQ=255)
                                                                                                                                                                      tGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGtt                                                                    >  1:1113409/1‑236 (MQ=255)
                                                                                                                                                                      tGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGtt                                                                    >  1:36421/1‑236 (MQ=255)
                                                                                                                                                                                tGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGc                                                       >  2:1018517/1‑239 (MQ=255)
                                                                                                                                                                                 gCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAGTACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCCTCCGGCATACCAAATACGCGTACGCCAAGTTGCGGCATTTCAGCg                                                      >  1:111090/1‑239 (MQ=255)
                                                                                                                                                                                 gCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCg                                                      >  2:9140/1‑239 (MQ=255)
                                                                                                                                                                                     gCCAATGCGACGATTCTCTTCGTTGTCGCTTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATaa                                                  <  2:1092152/239‑1 (MQ=255)
                                                                                                                                                                                         aTGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGc                                              >  2:327381/1‑239 (MQ=255)
                                                                                                                                                                                          tGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGAt                                                    >  1:463254/1‑232 (MQ=255)
                                                                                                                                                                                            cgccgtttCTCTTGGTTGCCGCCTTGGACGCCATGCCGCGCCAGCAGACGCCCGTTCATGGCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCAt                                            <  1:137843/232‑1 (MQ=255)
                                                                                                                                                                                                  ttCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAAGGCCCGGACCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATcgtggc                                      <  2:771256/238‑1 (MQ=255)
                                                                                                                                                                                                   tctcTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGGCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCCTcgtggcgt                                    >  1:1310700/1‑239 (MQ=255)
                                                                                                                                                                                                    ctctTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATcgtggcgtg                                   >  1:1601238/1‑239 (MQ=255)
                                                                                                                                                                                                      ctTCGTTGTCGCCTTTGACTTGAAGACGCGCCAGCAGACGACCGTTAATGCCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGTGGCGTGGt                                 <  2:225820/239‑1 (MQ=255)
                                                                                                                                                                                                      cgttgTTGTCGCCTTTGACGTAAGGACGCCCCAGCAGCCGACCGTTCATGTCGCCATCTAAAGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGTGGCGTGGt                                 <  1:1138847/235‑1 (MQ=255)
                                                                                                                                                                                                       ttCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGTGGCGTGGtt                                >  2:1282031/1‑239 (MQ=255)
                                                                                                                                                                                                         cGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATCCAGGTGAGAATTTAGGCCGCAAAGTCCCCGTCCGGGATAACAAATACGCGTACGCCGAGTTGCTGCATTTCAGCACTAACGGTATcatcgcgtgtatta                              >  1:1611729/1‑234 (MQ=255)
                                                                                                                                                                                                         cGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGTGGCGTGGTTTa                              >  2:827094/1‑239 (MQ=255)
                                                                                                                                                                                                                gCCTTTGCCGTCGTCACGCGCCAGCAGACGCCCGTTCCTGCCGCCATCTAAGGCCCGGACCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGTGGCGTGGTTTAGCCAGaa                       <  1:1002351/239‑1 (MQ=255)
                                                                                                                                                                                                                     tGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCCTTTCAGCGATAACGGCATCGGGGCGTGGTTTAGCCAGaa                       >  2:1028428/1‑234 (MQ=255)
                                                                                                                                                                                                                     gtccgcctggccgcgCCAGCGCAGCACCTTTCATCGCCCCGTTTAAGCCGCGCACCCCCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGTGGCGTGGTTTAGCCAGAATCGtt                  <  1:1366949/228‑1 (MQ=255)
                                                                                                                                                                                                                         gTCAGGCCGCCCCAGCAGACGACCGTTCATGTCGCCATCTAATGCCCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGTGGCGTGGTTTAGCCAGAATCGTTACCg              <  2:187878/239‑1 (MQ=255)
                                                                                                                                                                                                                           cATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGTGGCGTGGTTTAGCCAGAATCGTTACCGTc            >  1:1383955/1‑239 (MQ=255)
                                                                                                                                                                                                                           cATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGTGGCGTGGTTTAGCCAGAATCGTTACCGTc            >  2:1637373/1‑239 (MQ=255)
                                                                                                                                                                                                                             tGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGTGGCGTGGTTTAGCCAGAATCGTTACCGTCAg          >  2:1669232/1‑239 (MQ=255)
                                                                                                                                                                                                                                   gcCAGCAGACGACCGTCAGTGTCGCCATCTAAGGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGTGGCGTGGTTTAGCCAGAATCGTTACCGTCAGTTCGCt    <  2:1008537/239‑1 (MQ=255)
                                                                                                                                                                                                                                     cagcagCCGCCCGTTCATGTCGCCATCTAAGGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGTGGCGTGGTTTAGCCAGAATCGTTACCGTCAGTTCGCTCa  <  2:1702417/239‑1 (MQ=255)
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                     
GGATCAGCAGCGTTTCGGTAGTCGCGATATTGCCTTTGCGGCTAATGCCTTCCAGCAGATCGCCTTTGGTAATACCGGTGGCA‑GAGAAGATGACGTTATCGCTGCGCGCCATATCGCCCAGGCGC‑AATACTTTACCGGCTTCGATGCCCATCGCTTTG‑CAGCGTGCCAGCTCCTGCTCGCCAATGCGACGATTCTCTTCGTTGTCGCCTTTGACGTCATGACGCGCCAGCAGACGACCGTTCATGTCGCCATCTAATGCGCGGATCACCGCCGCAGAAACTACGCCTTCCGGCGCGCCACCAATACCGTACAGCACGTCAACTTCGCTGTCTGGCATACAGGTGAGAATTGAGGCCGCAACGTCGCCGTCCGGAATAGCAAATACGCGTACGCCGAGTTGCTGCATTTCAGCGATAACGGCATCGTGGCGTGGTTTAGCCAGAATCGTTACCGTCAGTTCGCTCA  >  NC_000913/4114654‑4115118

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A