Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F17 I0 R1
|
124 |
155.2 |
3079696 |
98.3% |
3027341 |
226.1 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,862,669 |
T→A |
24.5% |
pseudogene (934/1617 nt) |
glvC ← |
pseudogene, arbutin specific enzyme IIC component of PTS,enzyme, Transport of small molecules: Carbohydrates, organic acids, alcohols, PTS system, arbutin‑like IIB component, PTS system, arbutin‑like IIC component |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,862,669 | 0 | T | A | 24.5%
| 143.2
/ 19.1
| 121 | pseudogene (934/1617 nt) | glvC | pseudogene, arbutin specific enzyme IIC component of PTS,enzyme, Transport of small molecules: Carbohydrates, organic acids, alcohols, PTS system, arbutin‑like IIB component, PTS system, arbutin‑like IIC component |
| Reads supporting (aligned to +/- strand): ref base T (42/38); new base A (20/5); total (64/57) |
| Fisher's exact test for biased strand distribution p-value = 1.93e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 122 total aligned reads displayed.
ATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTA‑GTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATACATTACGGTCGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGTTGC‑GGGAATCAG‑CAAG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGA‑TAAACTGTCCGTAGATGAAGTG > NC_000913/3862434‑3862906
|
aTTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTA‑GTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATACATTACGGTCGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACCGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTTCCACCAGCATGGC‑GGTT‑CAGTGTGT‑GGGAAACa > 1:139787/1‑238 (MQ=255)
aTTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTA‑GTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATACATTACGGTCGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGGT‑AAGGTTTG‑GGGAAtaa > 2:1222701/1‑236 (MQ=255)
tatCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTA‑GTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATACATTACGGTCGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCCTGGC‑GGGT‑ATGAGTTC‑GGGGATCAG‑CAAG‑CCCC‑CCC‑Ctttt > 2:78860/1‑239 (MQ=255)
tatCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTA‑GTCAATCAGACCTCCGCCAATGTTGCCCACCACAC‑CAAAGAGATACATTACGGTCGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGGTGCGGGGAATCGG‑C‑AG‑CCCG‑CCC‑Ctttt > 1:19243/1‑239 (MQ=255)
gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTA‑GTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATACATTACGGTCGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGGAATTCCCACCAGCATGGC‑GGGT‑AAGGTTTC‑CGGGATAAGACCAG‑CCCC‑CCA‑Ctttaccc > 2:47266/1‑234 (MQ=255)
cgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTA‑GTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATACATTACGGTCGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGGTGC‑GGGGAACAG‑CCAA‑CCCG‑CCC‑CCTTTAcacca > 2:681248/1‑235 (MQ=255)
tGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTA‑GTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATACATTACGGTCGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGCT‑TAGGTTGC‑GGGGAAAAA‑CAAA‑ACCC‑CCA‑Ctttttaccagat > 2:1244330/1‑231 (MQ=255)
aactccGGGATCCAGTTTGGCGACAAACCTAA‑TTCATACAGCCCCCCGCCTGTGTCGCCCCCCACAC‑AAAAGAAATACATTAGGGCAGATATGGGGGCGGCCA‑GCAGGGCGTGTCCCGAAAACAGCAAGGGTGAAATAAAAAGGAAGGTAAATT‑CCAGCGGTTCGGTAATCCCCCCCAGCAGGGG‑GGTT‑AGGGTTGG‑GGGAATCAG‑CAAC‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTg < 2:1411730/233‑1 (MQ=255)
gggatcgattttGGCGTAAAACCCAGGTCAACCAGCCCCCCCCCCGTGTCGCCCACCCCAC‑CAAAGAGATCAATTACGGCGGACATGGAGCCCGCAA‑GCAGGGCGGGCCCCGCAAACAGCAAGGGAGAAAGGAAGGGGAAGGAAAATC‑CCGGCGGTGCGGTAATCCCCCCCAGCAGGGG‑GGTT‑AGGGTGGG‑GGAAATCAG‑CAAG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTg < 2:20879/224‑1 (MQ=255)
gccgcAGATTTGAGATAAAACCTA‑GACAACCAGCCCTCCGCCGTGGTCCCCCACCACTC‑AAAAGACATACATGACGTGAGACATTGAGCCCGCAG‑GCCCTGGTTTTCCCCCAACCAGCAAGGGTGAAGAGAAAGGAAAGGTAATTT‑CCAGCGTTTGGGTAATCCCCACAAGGAGGGC‑GGTA‑AAGGTTGG‑TGAAAACAG‑CAAG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTg < 2:1407569/234‑1 (MQ=255)
tCCAGTTTTGCGGTAAAACCTA‑GTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATACATTACGGTCGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGTTGC‑GGGGAACAG‑CAAG‑CCCC‑CCA‑CCTTTACCCCATTTTTCGGAGCGGCAGGG‑AAg > 1:1011466/1‑239 (MQ=255)
tCCAGTTTTGCGGTAAAACCTA‑GTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATACATTACGGTCGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGTTGC‑GGGGAACAA‑CCAA‑GCCG‑CCA‑CCTTTACCCCACTTTTCGGGGCGGCAggggag > 1:667023/1‑234 (MQ=255)
cAGTTTTGCGGTAAAACCTA‑GTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATACATTACGGTCGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑TAGGTTGC‑GGGGATCAG‑CAAG‑GCCGCCCA‑CTTTT‑CCCGATTTTCCCGTGCGCGTGTG‑AAgg > 1:594638/1‑237 (MQ=255)
ttggCGATAAAACCAA‑GCCAATCACCCCCCCGCCCATTTTCCCCACCCCAC‑AAAAGAAATACATTGCGGCCGACATGGAGGCCGCCA‑GCACGGCGGGCCCCGCAAACACCAACGGAAAAATGAAGAGGAAGGTAAATC‑CCAGGGGTTCGGTAATCCCCACCAGCATGGG‑GGTT‑AAGGTGGC‑GGAAATCAG‑CAAC‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTAc < 2:966540/233‑1 (MQ=255)
tGCGGTAAAACCTA‑GTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATACATTACGGTCGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTTAAAGGTTGC‑GGTAA‑CAGAAAAC‑CCCG‑CCC‑CTTTTCCCCCATTTTCCGGTG‑GGCAGGG‑AAGTaaaac > 1:221811/1‑233 (MQ=255)
cGGTAAAACCTA‑GTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATACATTACGGTCGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAAGGTTC‑GGGGATCAA‑CAAA‑GCCG‑CCC‑CTTTTTCCCCATTTTTCGGTGCGGCAGTG‑AAGCACAACG‑ccg > 2:428166/1‑237 (MQ=255)
gtaaaaaCCTA‑GACAATCAAGCCCCCCCCATTGTCGCCC‑CCACACACAAAGAGATACATAACGGCAGACA‑TGGGGCCCCCACGCCCGGGGTGTCCCACAAACAGCAACGGTAAAATGAACAGGAAGAAAATTC‑CCGGGGGTTCGTTAATCCCCACCGGCGTGGG‑GTTT‑AGGGTGGC‑GGGAACAAG‑CAAG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑a < 2:1011466/235‑1 (MQ=255)
aaccctaacaaaTCAGCCCCCCCCCCATGTTGCCCACCACAC‑CAAAGAAATACATTCCGGTCGAAATGGAGCCCGCCA‑GCAGGGCGTTTCCCGCAAACAGCACGGGTGAAATGAACAGGAAGGTAAATT‑CCGGCGGTTCGGTAATCCCCACCAGCAGGGG‑GGTT‑AGGGTGGC‑GGAAATCAG‑AAAG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGaa < 2:319263/229‑1 (MQ=255)
aaTCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATACATTACGGTCGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGTTGC‑GGGGATCAG‑ACAA‑CCCG‑CCC‑CTTTTTCCCGATTTTTCGGCGCGGCCGGG‑CAGAACATAG‑CT‑Aaaaaaaagaccccc > 1:1031946/1‑230 (MQ=255)
cGCCCATGTTGCCCACCACAC‑CAAAGAGATACATTACGGTCGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAAGGTTC‑GGGAATCAG‑CAAG‑CCCC‑CCA‑CTTTTTCCCCCTTTTCCGGTGCGGCAGTG‑AAGGACATCG‑CT‑AAAGAAAAACCCCC‑CGCC‑CCaaaaaat > 2:676895/1‑235 (MQ=255)
cGCCCATGTTGCCCACCACAC‑CAAAGAGATACATTACGGTCGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAAGGTGC‑GGGAATCAG‑CAAA‑CCCG‑CCA‑CTTTTACCCGCTTTTTCGGGGCGGCAGGG‑AAGTACATCG‑CC‑AAAGAAAAACCCAC‑CGCA‑CCAAA‑G‑aat > 1:1099632/1‑237 (MQ=255)
aTGTTGCCCACCACAC‑CAAAGAGATACATTACGGTCGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGGTGC‑GGGAAACAG‑CCAG‑ACCC‑CCC‑CTTTTTCCCCCTTTTTCGGGGCGGGAGTG‑GAGGACATCG‑CT‑CAAAAAAAGCCCCC‑GGCA‑CCCAA‑C‑Atttttta > 2:108955/1‑237 (MQ=255)
tccccACCACAC‑CAAAGAGAAACATTCCGGTCGACATGGGGGCCGCCG‑GCACGGCGTGTACCACAAACAGCAACGGTAAAATGAACAGGAAGTAAAATC‑CCGGCGGTTCGGTAATCCCCACCAGCAGGGC‑GGTT‑AGGGTGGC‑GGGAATCAC‑CAAG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTa < 2:839499/237‑1 (MQ=255)
tGCCCACCACAC‑CAAAGAGATACATTACGGTCGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑TAAGTTTC‑GGGGATCAG‑CCAG‑CCCG‑CCA‑CTTTTTCCCCATTTTTCGGGGCGGCAGGG‑AAAGACATCG‑CT‑TAAGAAAAACCCCC‑CGCA‑CCCAA‑A‑Atttttttgtt > 1:45754/1‑233 (MQ=255)
gcccccccACAC‑AAAAGATAACAATTCGGGCCGACATTGAGACCCCAG‑GGCCGGCGTGACCCGCAACAAGCAGGGGGGAAAGAAAAAGGAAGGAAAATC‑CCGGCGGTTCGTAAATCCCCACCAGCAGGGG‑GGTT‑AGGGTGGC‑GGAAACCAG‑CAAG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTa < 2:311320/237‑1 (MQ=255)
accacac‑aaAAGAGAAACATTACGGGCGAAATGGAGGCCCCCA‑GCACGGCGTGTACCGAAAACAGAAAGGGTGAAATGAACAGAAAGGAAAATT‑CCAGCGGTTCGGTAATCCCCACCAGCATGGC‑GGTT‑AGGGTTGG‑GGGAATCAG‑CAAG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑g < 1:218902/239‑1 (MQ=255)
accacac‑aaAAAACATAATATACGGCCGACAGTGGGCACGCCA‑GCCGGGCGTGTCCCGAAAACACCAGGGGTAAAAAAAACAGGAGGGTAAATC‑CCAGGGTTTCGATATTCCCCCCGACCAGGGC‑GTTA‑AAGTTTGG‑GGAAACCAG‑CAAC‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑g < 2:936560/239‑1 (MQ=255)
caccccccaaagtacgacttggcGGTCGACAGTGGGGCGGCCC‑GCAGGGGGTGTACTGCAAACAGCACCGTTGAAACGAACAGGAAGGTAATTG‑CCGGCGGTTCGTTAATCCCCCCCACAATGGC‑GTTT‑AAGGTTTG‑GGGACTCGG‑CGTC‑TCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑g < 2:825419/217‑1 (MQ=255)
aaaagagaaagaataTACATTACGGTCGACATGTGGGCCCCCA‑GCGCGGCTTGTCCCGCAAACAGAAAGGGTGGAATGAACAGAAAGGTAAATC‑CCAGCGGTTCGGTAATCCCCCCCAGCAGGGC‑GTTA‑AAGGTTGC‑GGAAACCAG‑CAAG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑g < 1:911491/225‑1 (MQ=255)
acac‑caAAGAGATACATTACGGTCGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAAGGTGC‑CGGGAACAA‑CAAA‑CCCC‑CCC‑CTTTTTCCCCCTTTTCCGGTGCGGCCGTG‑GAGGACAACG‑CC‑AAAGAAAAACCCAC‑CGCC‑CCCAA‑G‑ATTTTTGAG‑TTAC‑CGG‑G‑CAg > 1:685499/1‑239 (MQ=255)
agaTACATTACGGTCGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AATGGTGT‑GGGAAACAG‑CAAA‑CCCC‑CCACCTTTAACCCGCTTTCCCGG‑GCGGGCGGG‑AAAAACATCG‑CC‑TAAGAAAATCCCTCTGGAA‑CCAAG‑A‑ATTTTTggatatctagccggggaaaaa > 2:509510/1‑218 (MQ=255)
agaTACATTACGGTCGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGGTGC‑GGGAATCAG‑CAAA‑CCCC‑CCC‑CCTTTACCCCGTTTTTCCGTGCGGGCGTG‑AAGTACATCG‑CT‑CAAGAAAAGCCCCC‑CGCA‑CCCAA‑A‑AATTTTTAG‑TTTC‑CCT‑G‑CAGGGC‑AAAAc > 2:223603/1‑238 (MQ=255)
agaTACATTACGGTCGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAAGGTGC‑GGGGAAAAG‑AAAA‑CCCC‑CCC‑CTCTTATCCCATTTTTCCGGGCGGGAGTG‑AAGGACATCG‑CC‑AAAAAAAAGCCCAC‑GGCA‑CCAAACA‑ATTTTTTGG‑TAAC‑CG‑‑A‑CAGGGC‑aaaaa > 2:238699/1‑237 (MQ=255)
tACATTACGGTCGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑TAAGTTGC‑GGGGATCAG‑CAAA‑CCCC‑CCA‑CTTTTTCCCGCTTTTTCGGTGGGGCAGTG‑AAGGAAATAG‑CC‑AAAAAAAttgc > 1:277370/1‑191 (MQ=255)
tACATTACGGTCGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAAGGTGG‑GGGGAACAG‑CCAA‑CCCG‑CCC‑CCTTTTCCCGATTTTTCGGGGCGGCAGGG‑GAGTACAACG‑CT‑CAAGAAAAGCCCAC‑GGGA‑CCCAA‑G‑ATTTTTTGG‑TTTA‑CGT‑G‑CAGGGC‑AAAAACGc > 1:1311788/1‑238 (MQ=255)
cATTACGGTCGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑TAGGTTTC‑GGGGATCCG‑CAAA‑CCCC‑CCC‑CCTTTTCCCCACTTTCCCGTGCGGGCGGG‑GAGGACATTGCCT‑AAAAAAATGCCC‑C‑CGCA‑CCCAA‑A‑AATTTTTAG‑TTAT‑CGT‑G‑CCGGGC‑AAAAACGccc > 2:975121/1‑237 (MQ=255)
gTCGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGTTGC‑GGGGATCAG‑CAAG‑CCCG‑CCC‑CTTTTAACCGATTTTTCGGTGCGGCAGTG‑GAGTAAAACG‑CT‑AAAGAAAAGCCCAC‑CGCA‑CCAAA‑G‑ATTTTTTAG‑TTAC‑CGT‑G‑CCGGGC‑AAAACCACCTTCCgggga > 1:284853/1‑237 (MQ=255)
tCGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGGT‑AAGGGTGG‑GGGGATCAA‑CAAA‑CCCC‑CCC‑CTTTTTTCCGCTTTTTCCGTGGGGCAGGG‑GAGAAAAACG‑CT‑AAAAAAAAACCCCC‑GGCA‑CCAAA‑A‑ATTTTTTAGTTTAC‑GGG‑C‑CAGGGA‑AAAACCGCCTTCCGGGac > 2:940523/1‑238 (MQ=255)
gACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTTAAAGGTGGG‑GGGAATAAC‑CAAC‑CCCC‑CCC‑CTTTTCCCCG‑TTTTTCGGGGCGGCAGTG‑GAAGACATAC‑CT‑AAAAAAAAACCCCC‑GGGC‑CCCAA‑A‑ATTTTTTAG‑GTAC‑CGG‑G‑GAGGGG‑AAAAACGCCTTTCCGGaaaaa > 1:170924/1‑239 (MQ=255)
gACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAAGGTGC‑GGGAAACAA‑GCAG‑CCCC‑CCC‑CTTTTTCCCCCTTTTTCCGTGTGGGAGCG‑AAGTACATCGCCC‑AAAAAAATCCCCCC‑GCCC‑CCAAA‑A‑CTTTTTG‑G‑GTAC‑CCT‑C‑GAGGGC‑AACACCCCCTTccccggaca > 2:776649/1‑231 (MQ=255)
aCATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAAGGTTC‑GGGGATCAA‑CAAG‑CCCC‑CCC‑CCTTTACCCCGCTTTTCGGGGCGGCCGTGAAAGAACA‑CG‑CTCAAAAAAATCCCACC‑GCCC‑CCAAA‑G‑TTTTTTGGG‑TTA‑‑CGT‑GCCAGGGA‑AAAACAGCCTTCGGGGaaaa > 2:780694/1‑236 (MQ=255)
aCATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGGT‑AAAGGTTC‑GGGAATCAA‑CAAA‑CCCC‑CCC‑CTTTTTCCCCATTTTTCGGGGCGGCAGGG‑AAGGTAATCG‑CC‑AAAAAAAAGCCCCC‑CGCC‑CCCAA‑A‑ACTTTTTAG‑TTTCACGT‑‑‑CCGGGC‑AAAACAGCCCTCCcgggcaacc > 2:11886/1‑233 (MQ=255)
gccA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAAGTTGG‑GGGAAACAG‑CAAG‑CCCC‑CCA‑CCTTTTCCCGATTTTTCCGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAAAAATGCCCAC‑GGCA‑CCAAA‑A‑ATTTTTTAG‑GTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCCGGGACAAAGATTTTAGCg > 1:933322/1‑238 (MQ=255)
gccA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGGT‑AAGGGTTG‑GGGGATCAA‑CAAA‑CCCGCCCC‑CTTTTACCCG‑TTTTTCGGGGCGGGCGGG‑AAGGACATCG‑CT‑AAAAAAAAACCCCC‑CGCACCCAAA‑A‑ATTTTTTAG‑‑TAC‑CGTGG‑CGGGGA‑AAAACCCCCTCCCGGG‑ACAAACAGTTCAGCgg > 2:450989/1‑239 (MQ=255)
ccA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGTTGC‑GGGGAACAG‑CAAGCCCCC‑CCC‑CTTTTACCCCTTTTTCC‑GTGCTGGCGTG‑ACGTACAACG‑CT‑CAAGAAAAACCCAC‑CGCC‑CCCAA‑G‑AATTTTTAG‑TTAC‑CCC‑G‑CCGGGG‑CAAACCGCCCTCCGGGACCCACCAGTTCAACgc > 2:1101289/1‑237 (MQ=255)
cGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGCGGGTT‑AAGGTT‑C‑GGGAAACAG‑CCAA‑GCCG‑CCA‑CCTTTATCCGACTTTTCCGTGCGGCAGGG‑AAGTAAAACG‑CC‑AAAAAAAAGCCCCC‑CGCC‑CCCAA‑GAATTTTTGA‑‑TTAA‑CGT‑G‑CAGGGG‑CAAACCGCCCTCCCGGAACAACCATTTTAgacactcgcggcc > 2:861969/1‑226 (MQ=255)
ctACAGCAAAAAGCAAGGGGAAAAAGACCAGGAA‑GTAAATTCCCAGGGGTGCGGTAATCCCCCCCAGCAGGGG‑GGTT‑AAGGTTGG‑GGGAATCAA‑CAAC‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑aaa < 2:678880/238‑1 (MQ=255)
tACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑TAGGGTGG‑GGGAAACAG‑CAAG‑CCCC‑CCC‑CCTTTTCCCCGTTTTTCGGTGGGGCAGGG‑AAGTACATCG‑CC‑AAAGAAAAACCCAC‑CGCA‑CCAAA‑G‑ATTTTTTAG‑TTAC‑CCG‑G‑CAGGGG‑AAAAACGCCCTCCCGGAACAAACAATTCAACgggcccgcgccgcaaa > 2:907100/1‑225 (MQ=255)
ccGAAAACAGCAAGGGGAAAATGAACAGGAAGTTAATTC‑CCGGCGTTTGGGTAATCCCCCCCAGCTGGGC‑GGTT‑AAGGTTGG‑GGAAATCAG‑CAAG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑Tg < 1:1110934/239‑1 (MQ=255)
taaaagagaacgggTGAAATGAACGGGAAGGTAAATT‑CCAGCGTTTGGGAACTCCCCACCCGCATGGG‑GTTA‑AAGGGGGC‑GGGAACAAG‑AAAC‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGaa < 2:1317597/227‑1 (MQ=255)
acAAACAGCAACGGTAAAATGAAAAGGAAGAAAATTT‑CCGGCGGTTCGTTATTCCCCACCAGCATGGC‑GTTT‑AGGGTGGG‑GGAAACAAG‑CAAC‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGaa < 2:45754/238‑1 (MQ=255)
cAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGTTGC‑CGGAATCAG‑CAAA‑CCCG‑CCA‑CCTTTACCCGATTTTTCGGTGCGGCAGGG‑GAGGACAACG‑CT‑AAAGAAATACCCAC‑CGGA‑CCAAA‑G‑ATTTTTTAG‑TTAA‑CCG‑G‑CAGGGC‑AAAACCCCCTTTCCGGGACAACGATTTCAGCGGCG‑C‑GGCGCC‑C‑CAAA‑TGa > 2:807057/1‑237 (MQ=255)
cAAACAGCAACGGTGAAATGAACAGAAAGGAAAATT‑CCGGCGGTTGGGTAATCCCCCCCAGCTTGGC‑GTTT‑ATGTTTGC‑GGGAATAAG‑CAGG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGaa < 1:21538/238‑1 (MQ=255)
aaaaaGAACGGGAAGATAAATT‑CCAGGGGTAGGGTAACCCCCCCCCGTCGGGC‑GGTA‑AGGGTTGC‑GGAAATCAG‑CAAG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGAtgct < 1:431300/237‑1 (MQ=255)
aaaaaGAACAGGAAGGAAAATC‑CCGGCGGTCCGGAAATCCCCCCCAGCAGGGC‑GGTT‑AGGGTGGC‑GGGAATCAG‑AAAG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGAtgct < 1:776649/237‑1 (MQ=255)
aaaaTGAAGAGGAAGTAAAATC‑CCGGCGGTTCGATAATCCCCACCCGCAGGGC‑GGTT‑AGGTGTGC‑GAAAACCAA‑CAAC‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGAtgct < 2:1099632/237‑1 (MQ=255)
aaaaTGAAAAGGAGGGAAAATT‑CCAGCGTTCCGGTAATTCCCCCCAGCATGGG‑GGTT‑AAGGTGGG‑GGAAATCAG‑CAAG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGAtgct < 1:739550/237‑1 (MQ=255)
aaagaacgagAAGGAAAATT‑CCGGCGTTTCGTTACTCCCCCCCAGCAGGGC‑GGTG‑AGGGTTGG‑GAGAATCAG‑CAAC‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTgcg < 2:170924/230‑1 (MQ=255)
tcaaCAGGAAGATAAATC‑CCAGCGTTTCGGTATTCCCCCCCAGCATGGC‑GTTT‑AAGGTTGC‑GGGAATCAG‑CAAG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGcc < 1:537702/237‑1 (MQ=255)
agAACAGGAAGATAAATC‑CCAGCGGTTCGATAATCCCCACCAGCAGGGC‑GGTA‑AAGGTTGC‑GGGAACCAG‑CAAG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGcc < 1:1101289/238‑1 (MQ=255)
aaCAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGGTGC‑GGGAATCAG‑CAAA‑CCCG‑CCC‑CTTTTACCCCATTTTCCGGGGCGGCAGGG‑AAGTAAATCC‑CT‑AAAGAAAAGCCCAC‑GGCA‑CCCAA‑G‑ATTTTTTAG‑TTAC‑CGT‑G‑CAGGGG‑AAAAACGCCCTCCCGGAACAACGATTTTAGAGGCT‑C‑CGCGCG‑C‑AAAC‑TGGACTCTTTCCGCTGCCGCcccc > 2:118158/1‑238 (MQ=255)
aaCAGAAAGATAAATT‑CCGGCTGTTCGCTAACCCCCACCGGAATGGC‑GGTT‑AGGGGGGC‑GGAAATCAG‑CAAG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGcc < 2:277810/237‑1 (MQ=255)
ccAGGAAGATAAATT‑CCGGCGTTTCGGTAACTCCCACCAGCATGCC‑GGTT‑AAGGTTGC‑GGAAATCAG‑CAAG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAg < 1:1244330/238‑1 (MQ=255)
aCAGAAAAGAAAATT‑CCAGCGGTGCGTTAACCCCCACCAGCAGGGC‑GTTA‑AGGGTTGG‑GGGAATCAG‑CAAG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAg < 2:284853/239‑1 (MQ=255)
ggaaggaaAATC‑CCAGCGGTTCGGTAATCCCCACCAGCAGGGC‑GGTT‑AAGGTTGC‑GGAAATCAG‑CAGG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTa < 1:1289683/238‑1 (MQ=255)
tgaatataattcgcggggtggcGGTCATCCCCACCGGTGAGGT‑GGTT‑AGGGTCGG‑GGAAATCAC‑CAAG‑CCCG‑CCA‑CTGTTACCCGATTTGCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTa < 2:541964/217‑1 (MQ=255)
gAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGGTTC‑GGGAAACAG‑CAAA‑ACCC‑CCC‑CCTTTAACCGATTTTTCGGTGCGGCCGTG‑GAAGAAACCG‑CT‑AAAGAAATGACCCC‑CGCA‑CCAAA‑A‑ATTTTTTTG‑GTTA‑CGT‑G‑CAGGGCAAAAACGGCCTTCCGGG‑ACAACGATTTTAGCGGCT‑C‑GGCGCTCC‑AAAC‑T‑TACTCTTGTAGGTGTTGCGCCCACTAc > 2:636690/1‑238 (MQ=255)
gAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGGTGC‑GGGAAACAG‑CAAG‑CCCG‑CCA‑CTTTTTACCGCTTTTTCGGGGCGGGAGTG‑AAGGACATCG‑CT‑AAAGAAATGCCCCC‑GGCC‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAAACGCCTTCCGGGAACAACGATTTTAACGGCC‑CGGGCGC‑‑C‑AAACATAAACTCTTGCAGATGC‑GCGccccacaca > 2:385709/1‑233 (MQ=255)
aaaTTCCCAGCGGTTCGTTAATCCCCACCAGCAGGGG‑GTTT‑AAGTGTGG‑GGGAATCAG‑CAAG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTg < 1:133444/238‑1 (MQ=255)
ccaggCGGTGCGTTAACTCCCACCAGACTGGG‑GGTG‑TGGGGTGC‑GGAAATCAG‑CACC‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATgcc < 2:1308200/235‑1 (MQ=255)
atccccACCAGTAGGGG‑GTTT‑AAGGTTGC‑GTGAAACAG‑CAAC‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGc < 2:718112/236‑1 (MQ=255)
ccccggaaTGGC‑GGTT‑AAGGTTGC‑GGAAATCAA‑GAAC‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGAc < 1:509510/232‑1 (MQ=255)
ccccaGCTGGGT‑GGTT‑AGGGTGGG‑GGGAGTCAC‑GAGG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGAc < 1:595803/237‑1 (MQ=255)
ccccaGCATGGG‑GGTA‑AAGGTGGG‑GGGAATAAG‑CAAG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGAc < 1:1527838/237‑1 (MQ=255)
cccacgCAGGGG‑GGTT‑AGGGTGGC‑GAGAATCAG‑CAAG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACAGCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTGCAACAGCTGCCGGAc < 1:780694/234‑1 (MQ=255)
caccaGCATGGC‑TGTT‑AGGGTGGG‑GGAAAACAG‑AAAC‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGAc < 2:1388320/239‑1 (MQ=255)
caccaGCATGGC‑GGTT‑AAGGGTGC‑GGAAACCAG‑CAAG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGAc < 1:796395/239‑1 (MQ=255)
cccccgaaagtgggTT‑AGGGTGGC‑GGAAATCAG‑AAAC‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGAc < 1:1241099/227‑1 (MQ=255)
accaGCATGGC‑GGTT‑AAGGTTGC‑GGGAATCAG‑CAAG‑CCCG‑CCA‑CTTTTTCCCGATTTTCCGGTGCGGGGGTG‑AAGTACATCG‑CT‑AAAGAAAAACCCAC‑GGCA‑CCAAA‑G‑GTTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTTAGCGGCT‑C‑GGCGGT‑C‑AAAC‑TGAACTCTTGCAGGAGCCGGCCCCCATACATCTGCATGCCCGCTTCAACAGCttgcgggc > 2:1175704/1‑231 (MQ=255)
accaGCATGGC‑GGTT‑AAGGTTGC‑GGGAATCAG‑CAAG‑CCCC‑CCC‑CCTTTTCCCCATTTTTCCGGGCGGCAGTG‑AAGGACATCG‑CC‑AAAAAAATGCCCAC‑GGCC‑CCAAA‑G‑ATTTTTTAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCCGGAACAACGATTTTAGCGGCC‑C‑CGCGCC‑CAAAAC‑TAAACCCTTCCAG‑TGCTGCGCCCCGGAAATCTTAAATCCGCCCTCCACCACCGCCGGag > 2:483610/1‑237 (MQ=255)
caggcgtGGC‑GGTT‑AAGGGTGG‑GGAACACAG‑CAAG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCa < 2:130044/233‑1 (MQ=255)
ccggcgggggggTT‑AGGGTGGC‑GGGAATCAG‑CACG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCa < 2:1182139/229‑1 (MQ=255)
caGCATGGC‑GGTT‑AAGGTTGC‑GGGAATCAG‑CAAG‑CCCG‑CCA‑CTTTTACCCGATTTTTCGGGGCGGCAGGG‑GAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTa > 1:1320555/1‑204 (MQ=255)
tGGC‑GGTT‑AAGGGTGC‑GGGAATCAG‑CAAG‑CCCG‑CCC‑CTTTTTCCCGCTTTTTCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCCC‑GGCC‑CCCAA‑G‑ATTTTTTAG‑TTAC‑CGT‑G‑CAGGGC‑AAAAACGCCCTCCGGGAACAACGATTTCAGCGGCT‑C‑GGGGCC‑C‑CAAC‑TGAACCCTTTCAGAATCTGCCCCCCGTACACCTGAGTTGCCCCCTCCACCGCTGCCGGACCCAAAA‑Ta > 2:621512/1‑239 (MQ=255)
c‑GGTT‑AGGGTGGG‑GGAAACCAG‑AACG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGA‑Taaa < 1:807057/238‑1 (MQ=255)
c‑GGTT‑AGGGTGGG‑GGAAAACAA‑AAAG‑CCCG‑CCA‑CGTTGACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGA‑Taaa < 1:669938/238‑1 (MQ=255)
gggTT‑AAGGTAGC‑GAG‑ATCCG‑CAAGACCCG‑CCA‑CTTTTTCCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCCC‑GTCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGA‑Taaa < 2:1427250/237‑1 (MQ=255)
aGGTTGC‑GGGAATCAG‑CAAG‑CCCG‑CCC‑CTTTTACCCGATTTTCCGGTGCGGCCGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCCC‑GGCA‑CCCAA‑G‑ATTTTTTAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCC‑GCCGCC‑C‑AACT‑GGACCTCTT‑CAGATGCCTCGCCCCGTACCTCCTGATGCCCCCCTCAACCACCGCCCGGCCCAAGATTAAACTgcc > 2:554114/1‑236 (MQ=255)
ggtgggggAATCAG‑CAAG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGA‑TAAACTGTCCGt < 1:778816/233‑1 (MQ=255)
ggggggAATCAG‑CAAG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGA‑TAAACTGTCCGTAGa < 1:848008/236‑1 (MQ=255)
gcggggAACCGG‑CAAG‑CCCG‑CCA‑CTGTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGA‑TAAACTGTCCGTAGa < 1:312342/236‑1 (MQ=255)
c‑GGGAATCAG‑CAAG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTg > 1:1184428/1‑93 (MQ=255)
c‑GGGAATCAG‑CAAG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGA‑TAAACTGTCCGTAGATg > 1:1378478/1‑239 (MQ=255)
c‑GGGAATCAG‑CAAG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGA‑TAAACTGTCCGTAGATg > 1:1488177/1‑239 (MQ=255)
c‑GGGAATCAG‑CAAG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGA‑TAAACTGTCCGTAGATg > 1:1510172/1‑239 (MQ=255)
c‑GGGAATCAG‑CAAG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGA‑TAAACTGTCCGTAGATg > 1:1186452/1‑239 (MQ=255)
c‑GGAAACCAG‑CAAG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTg < 2:1184428/93‑1 (MQ=255)
gggAATCAG‑CAAG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGA‑TAAACTGTCCGTAGATGa > 1:266994/1‑239 (MQ=255)
gAACCAG‑CAAG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGA‑TAAACTGTCCGTAGATGaa < 1:483610/238‑1 (MQ=255)
aTCAG‑CAAG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACACAAGA‑TAAACTGTCCGTAGCAGAAgtg > 2:788930/1‑239 (MQ=255)
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ATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTA‑GTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATACATTACGGTCGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGTTGC‑GGGAATCAG‑CAAG‑CCCG‑CCA‑CTTTTACCCGATTTTCCGGTGCGGCAGTG‑AAGTACATCG‑CT‑AAAGAAATGCCCAC‑GGCA‑CCAAA‑G‑ATTTTTGAG‑TTAC‑CGT‑G‑CAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCT‑C‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGA‑TAAACTGTCCGTAGATGAAGTG > NC_000913/3862434‑3862906
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
