Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F28 I0 R1
|
140 |
172.9 |
3477528 |
97.9% |
3404499 |
226.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,862,669 |
T→A |
25.8% |
pseudogene (934/1617 nt) |
glvC ← |
pseudogene, arbutin specific enzyme IIC component of PTS,enzyme, Transport of small molecules: Carbohydrates, organic acids, alcohols, PTS system, arbutin‑like IIB component, PTS system, arbutin‑like IIC component |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,862,669 | 0 | T | A | 25.8%
| 93.4
/ 17.9
| 97 | pseudogene (934/1617 nt) | glvC | pseudogene, arbutin specific enzyme IIC component of PTS,enzyme, Transport of small molecules: Carbohydrates, organic acids, alcohols, PTS system, arbutin‑like IIB component, PTS system, arbutin‑like IIC component |
| Reads supporting (aligned to +/- strand): ref base T (26/34); new base A (15/6); total (45/52) |
| Fisher's exact test for biased strand distribution p-value = 4.15e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.11e-01 |
ATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑TTGCGGGAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGAA > NC_000913/3862434‑3862903
|
aTTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTTA‑GG‑GTGCGGGGA‑TCa > 2:1540977/1‑238 (MQ=255)
tttGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑TTGCGGGAA‑TCAG‑c < 2:1343425/239‑1 (MQ=255)
gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAAGGG‑TTGGGGGAA‑‑CAG‑C‑AAG‑GCCGCCC‑CTTTTA‑ccc > 2:1062081/1‑238 (MQ=255)
gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑GTTA‑AG‑TTTCTGGAA‑TCAG‑C‑AAA‑CCCCCCC‑CTTTTT‑ccc > 2:203975/1‑238 (MQ=255)
cgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑GTTA‑AG‑TTGTGGGGA‑TCAA‑C‑AAGCCCCCCCC‑CTTTTA‑cc > 1:992510/1‑237 (MQ=255)
cgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑GTAA‑GGTTTGGGGGAA‑taccaaaaccacccccttttacc > 1:704548/1‑215 (MQ=255)
cgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑ATAA‑GG‑GTGGGGGAA‑ACAC‑C‑AAGCCCCGCCC‑TTTTTA‑ccga > 2:880466/1‑237 (MQ=255)
tGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTTA‑GG‑TTGCGGGAA‑TCAG‑C‑AAG‑CCCGCCC‑CTTTTT‑CCCCAtt > 2:964818/1‑239 (MQ=255)
gTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GGTTTGCGGG‑A‑TTAA‑C‑AAG‑CCCCCCC‑CCTTTT‑ACCGGtttt > 2:1355815/1‑239 (MQ=255)
gTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑GTGCGGGGA‑TCAG‑G‑AAA‑CCCGCCACCTTTTC‑CCCGAttt > 2:511002/1‑239 (MQ=255)
ttGCTGAACATCGGGATCCAGTTTTGCGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑AG‑TTTCGGGAA‑TCCG‑C‑AAA‑CCCCCCA‑CCTTTT‑ACCGGtttt > 2:43569/1‑238 (MQ=255)
caccacgggtaccATTTTTGGGGAAAAAC‑CGAATCAAACCGGCCCCCCCCCATTGTACCCCACCACCCCAAAGAAATAAATT‑CGGGCGAACTTTGGGCCCGC‑CACCACGGGGTGCACCGC‑AAACACCAGCGGAGAAATGAAAAGGAAGGAAAATCCCAGGGGTTGGTT‑ATTCCCCCCCGGTAGGGCGG‑TTAG‑GG‑TGGCGGGAT‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTg < 1:230037/228‑1 (MQ=255)
caccggaggccATTTTGGCAGAAAAAC‑CTACCAAAGCAGCCCCCCGCCCA‑TGTCCCCCCCCCACCCAAAGGGATACTTTACGGTAG‑ACGTGGAGGCCGC‑CGGCACGTGGT‑TTCCGCAAAACAGCACGGGTGAAATAACCGGGAGGGAAATTTCCAGCGGTTGGGT‑ACTCCCCACCATCATGGCGG‑TTAG‑GG‑TGGCGGGAA‑TCAA‑A‑AAC‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCgg < 1:713343/230‑1 (MQ=255)
cctgggactcgtgtttGCGGAAAAACACTAGACAATCGGCCCCCCCCCCG‑GTTTGCCCCCCACACAAAAGAAACACTTGAC‑GTCGAACATGGA‑GCCGCTCAGCCCGGCGTGAGCCGC‑AAACACAAACGGTGAAATGAACAGGAAGGTAAATCCCAGGGGTCCGGT‑AATCCCCCCCAGCAGGGCGG‑TTAA‑GG‑TTGCGGAAA‑TCAG‑C‑AAC‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCgg < 1:1632544/226‑1 (MQ=255)
cGGGATCCAGTTTTGCGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTTA‑GG‑ATGGGGGGA‑ACAG‑C‑AAA‑CCCCCCC‑CTTTTT‑CCCCCTTTTCCgtggtggcgg > 2:1107280/1‑230 (MQ=255)
cGGGATCCAGTTTTGCGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑GTGCGGGAA‑TCAG‑C‑AAA‑CCCCCCC‑CTTTTA‑CCCGATTTTCTGGTGCGG‑ccg > 2:463308/1‑237 (MQ=255)
aGTTTTGCGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑GGAA‑AG‑GTGCGGGGA‑TCAA‑CAAAA‑CCCCCCC‑CTTTTC‑CCCGATTTTcgtgggggcgatgggaga > 1:1584884/1‑221 (MQ=255)
ttGCGGTAACAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGA‑AATTACCACCAGCATGGCGG‑GTAA‑GG‑GTGCGGGGA‑GCAA‑C‑AAC‑CCCACCA‑CGTTTA‑CACCATTTTCCTGTTCGG‑cgggagaggacaag > 1:694290/1‑225 (MQ=255)
ttGCGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑GTGCGGGGA‑TCAA‑C‑CAG‑ACCGCCA‑CTTTTA‑CCCCCTTTTTCGGGGGGG‑CAGGGGAGTACaac > 1:840986/1‑236 (MQ=255)
cGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑GTGCGGGAA‑TCAG‑C‑AAG‑CCCGCCC‑CCTTTA‑CCCCCTTTTTCGGGGCGG‑CAGTGAAGTACACCGCtc > 2:1501010/1‑238 (MQ=255)
cGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑AG‑GTGCGGGGA‑AAAC‑G‑AAA‑CCCCCCC‑CTTTTT‑CCCCCTTTTTCGGTGCGG‑CAgcggagggcaacccca > 1:363399/1‑224 (MQ=255)
cggaaatccagatacatccAGCCCCCCCCCCG‑TGTGCCCCCCCACAACAAGGAGATCCATTAGGGGGG‑TCATGGAGCGCGC‑CAGCGCGTCGGGTACCGC‑AGACAGAGAGGGTAAAAGAAAAGGGGAGGTAAA‑TCCAGGGGGGGGGTGAACTCCCCCCGGAAGGGCGT‑TGAG‑GG‑GTGCGGGAA‑ACAG‑A‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCt < 1:402425/220‑1 (MQ=255)
tagacaaccaccccTCCCCCCA‑TTTCGCCCCCCACACAAAAGATATACATCACGGTCG‑AAATTGAGGCCGC‑CAGCAGGGCGTGTCCCGC‑AAACAGCAACGGAGAAATGAACAGGAAGATAATTCCGAGCGGTTCGGT‑AATCCCCACCAGCATGGCGG‑TTAA‑GG‑TTGCGGAAA‑TCAG‑C‑AAC‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGcc < 1:1246597/227‑1 (MQ=255)
cAACCAGCCCCCCCCCCT‑TGTCCCCCCCCACCACAAAGAAAATCATTGCGGCCG‑AAATTGGGGCCGC‑AAGCACGGGGGTTCCCGA‑AAACAGCAACGGGGAAATGAACAGGAGGATAAATCCCGGGGGTTCGTT‑AATCCCCCCCAGCATGGCGG‑TTAA‑GG‑TGGCGGGAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCa < 1:799732/237‑1 (MQ=255)
cgtgtcccccACCCCCCAAAAAAGAAACATCGCGGCGG‑ATATGGGGGCCGC‑CAGCACGGGTTGTACCGA‑AAACAGAAGGGGGGAAATGAACAGGAAGGAAATTTCCAGCGGTTCGGT‑AATCCCCCCCAGCAGGGGGG‑TTAG‑GG‑TTGGGGGAA‑CAAG‑C‑AAC‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCGCGG‑CA‑CCAAAGATTTTTg < 1:1318120/232‑1 (MQ=255)
aagttagccacccacaccaAAGAAATAATTTAGGTTGG‑AAATGGAGGCCGC‑AAGCCGGGGGGAAACCAC‑AAACTGCAATGGAAAAGTGAACGGGAAGAAAAATCCCATCGGTACGGT‑AATCCCCACCTGAAGGTCGT‑TTAA‑GG‑GTGGGGGAA‑GAAG‑A‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTg < 1:396549/228‑1 (MQ=255)
a‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑GTAA‑AG‑GTGGGGGGA‑AGAA‑C‑AAA‑CCCGCCC‑CATTTA‑CCCCATTTTTCCGTGCGG‑CCGGGAAGGACATCCCTTAAAAAA‑TGCACCAGG‑GA‑CCCAAGAATTTTGa > 1:367250/1‑239 (MQ=255)
ggCCCCCCACCCAAAAGAGAGATATTAGGTTAG‑AATGGGAGGCCGC‑AAGCACGGGTGGCCCCGA‑AAACAGAAGGGAGGAAAGGAAAAGGAAGGAAAAGTCGGGCGGTGCGGA‑AATCCCCACAATCAGGGGGT‑TTAA‑GG‑TGGGGGGAA‑TCAA‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTa < 1:921844/238‑1 (MQ=255)
gCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑GTGCGGGGA‑TCAG‑C‑AAG‑CCCGCCC‑CTTTTT‑CCCGCTTTTTCCGTGCGG‑CAGGGAAGTACATCGCTAAAGAAA‑AGCCCCCGG‑GA‑CCAAAGAATTTTTAGTTa > 2:1318120/1‑238 (MQ=255)
cacaccaAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑AG‑TTTCGGGGA‑TCAG‑C‑GAA‑CCCCCCA‑CTTTTA‑CCCCCTTTTTCCGTGCGG‑CCGTGGAGTAAAACGCCAAAAAAA‑ATCCCACCG‑CC‑CCCAAAATTTTTTAGtttacggtca > 1:1421619/1‑231 (MQ=255)
agagATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑GTGCGGGGA‑TCAG‑C‑AAG‑CCCCCCC‑CCTTTA‑CCCGATTTTTCGGTGCGG‑CAGGGAAAGACAACGCTAAAGAAA‑ATCCCACCC‑GA‑CCCAAAAtttttttggttacgcgcaggggcaaa > 1:1557621/1‑218 (MQ=255)
agaTACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTTA‑AG‑GTGCGGGAA‑ACAC‑C‑CAG‑CCCGCCA‑CTTTTA‑CCCCCTTTTTCGGTGCGG‑CCGTGCAGGACAACGCTCAAGAAA‑ACACCACAG‑CG‑CCCAAACTTTTTGTGGTA‑CCG‑T‑GCAGGGC‑caaaa > 1:310832/1‑237 (MQ=255)
aTACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAAGGG‑TGGGGGGAA‑CCGC‑C‑AAC‑CCCCCCC‑CTTTTA‑CCCGTTTTTCCGG‑GCGG‑CCGGGGAGGAAAATGCCTAAAAAA‑AGCCCCCCG‑CACCCAAGGATTTTTTGGTTA‑CCG‑T‑CAAGGGA‑AAAAcc > 1:1653528/1‑238 (MQ=255)
aTACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑GTAA‑GG‑GTTTGGGGA‑ACAG‑CAAAA‑CCCCCCC‑CTTTTC‑ACCCTTTTTCGGGTGCGG‑‑AGGGGAATACACACCTAAAAAAACTCCCCCCGG‑CC‑CCAAAAATTTTTAGGTTA‑CAG‑G‑GC‑GGGC‑AAAAcca > 1:1582724/1‑237 (MQ=255)
aTACAGTACGGCGG‑AAATGGGGCCCCC‑CGGCCCGGGGTTCACCGC‑AAACAGAAACGGTAAAATGAACGGGAGGGTAATTTCCAGCGGTTGGGT‑ACTCCCCCCCAGCAGGGGGG‑TAAG‑GT‑TTGCGGGAA‑TAAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGc < 1:1062081/239‑1 (MQ=255)
tACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTTA‑GG‑GTGCGGGAG‑ACAG‑C‑AAA‑CCCCCCA‑CATTTA‑CCCCCTTTTTCGGTGCGG‑CCGTGAAAAACATCGCCAAAGAAA‑ACCCCACGG‑CC‑CCAAAAAATTTTTAGTTA‑ACG‑C‑GCAGGGG‑AAAAACGc > 1:1447400/1‑238 (MQ=255)
aCGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑GTGCGGGGA‑TCAG‑C‑AAA‑CCCGCCA‑CTTTTA‑CCCGATTTTTCGGTGCGG‑CAGGGGAGGACATCGCTAAAGAAA‑AGCCCCCGG‑CA‑CCCAAGATTTTTTAGTTA‑CCG‑A‑GCAGGGC‑AAAACCGCCTTCCgg > 2:885356/1‑239 (MQ=255)
cGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑GTGCGGGAA‑ATAG‑C‑AAA‑CCCCCCC‑CTTTTT‑ACCCATTTTTCGGTGGGG‑CCGGGAAGTACATCGCTAAAAAAA‑CGCCCACGG‑CA‑CCAAAAAATTTTTTGTTA‑ACG‑T‑GCAGGGG‑CAAAACGCCCTCCcgg > 2:795031/1‑239 (MQ=255)
cGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑ATGTCGGAC‑TTCG‑C‑AAA‑ACCCCCA‑CCTTTA‑TCCCCTTTTCCCGGGCCG‑GCGGGAAGGACCTCTCTAAAACAA‑CTACCCCCG‑CC‑CCCCACATTTTTGAGTTA‑CCT‑TCACAGACC‑AAAACACCCTTCCgg > 1:1103265/1‑239 (MQ=255)
gTCG‑ACATTGGGGCCGC‑CAGCCCGGGGTGTACCGC‑AAACAGAAAGGGGAAAATGAACGGGAAGTAAAATTCGAGCGTTTGGTT‑AATTCCCCCCAGCTGGGCGG‑TTAA‑GG‑TTGCGGAAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGa < 2:1192526/238‑1 (MQ=255)
gTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑AG‑GTTCGGGGA‑ACAG‑C‑AAA‑CCCGCCA‑CTTTTATCCCAATTTTCC‑GTGCGG‑CGGGGAAGTAACTCGCTAAAGAAA‑TGACCACCG‑CC‑CCAAAAAATTTTTAGGTA‑ACC‑G‑GCAGGGC‑AAAAACGCCCTCCgggga > 2:823724/1‑237 (MQ=255)
gTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑GTTA‑GG‑GTGCGGGAA‑ACAG‑C‑CAG‑CCCCCCC‑CTTTTA‑CCCCGTTTTCCGGGGCGC‑AGGTGAAAGAAATCGCCAAAAAAA‑AGCCCAAGGACC‑CAAAAAATTTTTAGGTTC‑CTG‑T‑GC‑GGGC‑AAAACCACCATCCgggg > 1:269688/1‑237 (MQ=255)
g‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑ATAA‑AG‑GTTCAGGAA‑ATAG‑C‑AAA‑CCCGCCA‑CCTTTACCCCGGTTTACCGGGGCGG‑‑AGGGGAGTAAAACGCCCAAGAAA‑TTGCCAACG‑CA‑CCAAAAAATTTTTGGTTT‑CCGTT‑CCGGGGA‑AAAACAGCCTTCCGGGacca > 1:1666384/1‑239 (MQ=255)
aCATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGGTTTAA‑GG‑TTGGGGGAA‑‑CAA‑C‑AAGCCCCCCCC‑CTTTTA‑CCCCTTTTTCC‑GTGCGGCCGGGGAAGGAAACCCCCAAAAAAA‑T‑CCCACCG‑CC‑CCCAACAATTTTTAGATACCCC‑T‑GCAGGAA‑AAAACC‑CCCTCCGCGaacaaa > 1:557922/1‑238 (MQ=255)
aTTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑GTAA‑GG‑GTGAGGGAA‑ACAG‑C‑GAG‑CCCCCCC‑CTTTTT‑CCCCGATTTCCGGTGGGG‑GAGCGGAGTACAAAGCTCAAAAAA‑TTCCCCCCG‑GC‑CCCAAGAGTTTTTAGGTA‑CCC‑A‑GCAGGTG‑AAAAcaccccccagagagcaaagt > 1:978431/1‑220 (MQ=255)
ccgc‑cAGCACGGCGTGTACCGA‑AAACAGCAACGGTGAAAGGAACAGGAAGGAAAATCCCAGCGGTTGGGT‑AATCCCCACCAGAAGGGCGG‑TTAA‑GG‑TGGCGGGAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAg < 2:1447400/238‑1 (MQ=255)
gc‑cAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGGTTTAA‑GG‑TT‑CGGGAA‑TCAG‑C‑AAA‑CCCGCCC‑CCTTTT‑CCCGCTTTTCCCGGGCCG‑CCGGGGAGTAAATCCCTAAAAAAA‑AGCCCACCG‑CC‑CCCAAGATTTTTTAGTTA‑CCC‑C‑GCAGGGCAAAAACCCCCTCCCGGGAAAAACGttttacccg > 1:1700777/1‑234 (MQ=255)
gc‑cAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑AG‑TTGCGGGAA‑ACAG‑C‑AAA‑CCCCCCC‑CTTTTA‑CCCGATTTTCCCGGGCGG‑CAGTGAAATACATCTCTAAAGAAA‑AACCCACAG‑CC‑CCCAAAATTTTTTAGGTA‑ACG‑T‑GCAGGGG‑AAAACCCCCCTCCCGGAAAAAAGATTTccacg > 2:540976/1‑234 (MQ=255)
gc‑cAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑GTTA‑GG‑TTTCGGGGA‑TCAGCC‑AAC‑CCCCCCC‑CTTTTC‑CCCG‑TTTTTCGGTGCGG‑GCGTGGAGTACAACGCTTAAAAAA‑AACCCCCCG‑CC‑CCCAAGATTTTTTATGTA‑CCG‑C‑GGCGGGC‑AAAAACCCCCTCCCGGGACAAAGATTTCCGccg > 1:223953/1‑237 (MQ=255)
ctggCGGGCACGGC‑AAACGACAACGGTGAAATGAACAGGAAGGAAAATCCGAGCGGTTCGGA‑AATTCCCACCAGTAGGGCGG‑TTAG‑GG‑TTGGGGAAA‑TCAC‑C‑AAG‑TCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCgg < 1:503984/236‑1 (MQ=255)
cgggCGTGTACCGC‑AACCAGAAACGGTGAAATAAACAGGAAGGTAAATCCCGGCGGTTGGGT‑AATCCCCCCCAGCATGGCGG‑TTAA‑GG‑TGGCGGGAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTc < 2:1330252/234‑1 (MQ=255)
gcgggtcccacaacaagaaaCGGTAAAATGAAAAGGAAGGAAAATCCCGGGGGTTCGGT‑AATCCCCACCAGCATGGCGG‑TTAA‑GG‑TGGGGGAAA‑TCAG‑A‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGgcgc < 2:223953/220‑1 (MQ=255)
cGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑GTGCGGGGA‑ACAG‑C‑AAA‑CCCCCCC‑CTTTTT‑CCCCGTTTTTCGGGGCGG‑CCGGGGAGTAAATCGCTAAAAAAA‑AGCCCCCCG‑CC‑CCAAAAAATTTTTAGTTA‑CCA‑G‑GGCGGGC‑AAAAACCCCCTCCCGGGACAACCATTTCAGGGGCgcggcggc > 1:1559389/1‑236 (MQ=255)
cGTGTACCAC‑AAACAGAAACGGTGAAATGAACAGGAAGGAAAATCCCAGGGGTTCGGT‑AATCCCCCCCAGCAGGGCGG‑TTAA‑GG‑TGGCGGGAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCt < 2:992510/238‑1 (MQ=255)
tcacccagC‑AAGCACCAACGATGAAATAAACAGAAAGGAAAATCCCCGGGGTTGGGA‑ACTCCCCCCCACAAGGGCGT‑TGAG‑GG‑TTGCGGGAA‑GCAG‑A‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTc < 1:245784/231‑1 (MQ=255)
taaaagagccagcAGCAAGGGTGAAATGAACAGAAAGGTAAATTCCGGCGGTTCGGT‑AATCCCCCCCAGCAGGGCGG‑TTAA‑GT‑TTGCGGAAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTc < 2:848358/226‑1 (MQ=255)
aCCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGAAAATTCCAGCGGTTCGGT‑AATCCCCCCGAGCATGGGTG‑TTAA‑GG‑TTGCGGGAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑‑AAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTg < 2:1141075/239‑1 (MQ=255)
ccGC‑AAACAGCAAGGGTAAAAGAAAAGGGAAGGAAAATCCCGGGGTTGCGGT‑AATCCCCACCAGCAGGGGGT‑TTAG‑GG‑TTGCGGAAA‑TCAG‑A‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTg < 1:885356/239‑1 (MQ=255)
ccGA‑AAACAGCAGGGGAAAAAGGAAAAGGAGGTAAAATCCCAGCGGTTCGGA‑AATTCCCACCAGCAGGGGGG‑TTAA‑GG‑TGGGGGGAA‑CCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTg < 2:376099/239‑1 (MQ=255)
ccgaagacaacaactgaaaaaTGAACTGGAATGAAAATCCCAGCGCTTCGGT‑AGTTCCCCCCAGGTGGGCTG‑CTAG‑TG‑GTGGGGAAA‑TCAG‑C‑AAT‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CT‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTg < 1:64970/221‑1 (MQ=255)
cGC‑AAACAGCAACGGGGAAATGAACAGGAAGGTAAATCCCAGGGGTTCGGA‑AATTCCCCCCAGCAGGGCGG‑TTAA‑GT‑TTGGGGAAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑Ca < 2:260623/127‑1 (MQ=255)
gaaaaCAGCAACGGTGAAATGAAAAGGAAGGTAAATCCCAGCGGTTCGGT‑ACTCCCCCCCAGCATGGCGG‑TTAA‑GG‑TTGCGGGAA‑TCAG‑A‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGaa < 2:1584884/237‑1 (MQ=255)
aGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑TTGCGGGAA‑TCAG‑C‑AAG‑CCCGCCC‑CTTTTA‑CCCGCTTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑AGCCCACGG‑CA‑CCCAAGAtttttta > 2:167255/1‑165 (MQ=255)
cAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑TTGCGGGAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCCATTTTTCGGTGCGG‑CAGTGAAGTAAATCGCCAAAGAAA‑AACCCACCG‑CA‑CCCAACATTTTTTAGTTA‑CCG‑T‑GCAGGGC‑AAAACCCCCCTCCGGGAACAACGATTTTAGCCGCTCGGCGCCCaaaacacaatccttc > 1:1174008/1‑226 (MQ=255)
cAACGGTAAAAGAAACAGGAAGTAAAATCCCAGCGGTTGGGT‑AATTCCCACCAGCAGGGCGG‑TTAA‑GG‑TGGGGGAAA‑TAAG‑A‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCa < 2:1174008/239‑1 (MQ=255)
tGAAAAGAAAGGGAAGGTAAATTCCGGCGGTTCGGT‑AATTCCCACCGGCAGGGCGG‑TTAA‑GG‑TGGCGGGAA‑ACAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAG‑TA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGAtgct < 2:704548/238‑1 (MQ=255)
gaaataagaaGGAAGTTAAATTCCAGCGGTGCGTT‑AATCCCCACCAGCATGGCGG‑TTAA‑GG‑TGGCGGGAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGAtgct < 2:860232/229‑1 (MQ=255)
gaaagaaaCGGGAATATATATTCCTGGGCTGCGGT‑AATTCCGACCAGCATGGCGT‑TAAA‑GG‑GGGGGGGAA‑ACAG‑C‑AGC‑GCCGCCA‑CTTTTA‑CCCGATTGACCGGTGCGG‑CATTGAAGTACATCGCTAGAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATGTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGAtgct < 1:1376694/232‑1 (MQ=255)
gaaaaaaaCAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGAATGGCGG‑TTAA‑GG‑TTGGGGAAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGAtgct < 2:427958/232‑1 (MQ=255)
aaaaggaaaaggaAGGTAACTCCCAGGGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑TTGCGGGAA‑TAAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGAtgct < 2:557922/237‑1 (MQ=255)
aaaaTGAACAGGAAGGTAAATCCCAGCGGTGCGGT‑AATTCCCCCCAGCATGGCGG‑TTAA‑GG‑TTGCGGGAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGAtgct < 2:1559389/237‑1 (MQ=255)
aaaTGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑TTGCGGGGA‑ACAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCCGTTTTCCGGTGGGG‑CAGGGAAGGAAATCGCTAAAGAAA‑AGCCCCCGG‑CC‑CCAAAGATTTTTTAGTTA‑CCG‑T‑GCAGGGG‑CAAACCGCCTTCCGGGGACAACCATTTCTGCGGCTCCGCGGCCACACTGCActcccctttctttta > 1:848358/1‑226 (MQ=255)
aaaTGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑GTGCGGGAA‑TCAG‑C‑AAA‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGGACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTTAGTTA‑ACG‑T‑TCAGGGC‑AAAAACGCCTTCCGGGGACAACGATTTCAGCGGCCCGGGGCTCAAACTGAACCCtttgcgaagctt > 2:1005672/1‑228 (MQ=255)
aaaaaaaagaaaGGTAATGTCAGGCGGTGCGTT‑AATCCCCACCAGTATGGGGT‑TTAG‑GG‑TGGCGGGAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTgcg < 1:1005672/229‑1 (MQ=255)
aaTAAAGAGGAGGATATATTCCGGCGGTTGGTT‑ACTCCCCACCACTTTGGCGG‑TAAA‑GG‑GTGCGGGAA‑CCAC‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTgcg < 1:1107280/239‑1 (MQ=255)
tGAACAGGAAGGAAAATCCCGGGGGTTGGGA‑AATCCCCACCAGCATGGCGG‑TTAG‑GG‑TTGCGGAAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGcc < 2:1582724/239‑1 (MQ=255)
acaaggaaggaAAGTCCCGGTGGTGCGGT‑AATCCCCCCCAGCAGGGGGG‑TTAA‑GG‑TTGCGGAAA‑CCAG‑C‑AAC‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGcc < 1:154066/234‑1 (MQ=255)
aagaggaaggaAAATTCCGGGGGTGCGGT‑AATCCCCACCAGCA‑GGGGG‑TTAAGGG‑TGGGGGGAA‑ACAG‑A‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGcc < 1:1540977/234‑1 (MQ=255)
aCAGGAAGTTAAATTCCAGCGGTTCGGT‑AATCCCCACCAGCGGGGCGG‑TTAA‑GG‑TGGCGGGAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAg < 2:363399/239‑1 (MQ=255)
cccAGCGGTTCGGT‑AATCCCCACCAGCATGGCGG‑TTAA‑GG‑TGGCGGGAA‑CCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑Ca < 2:80950/89‑1 (MQ=255)
gCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑TTGCGGGAA‑TCAG‑C‑AAG‑CCCGCCC‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGGACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTTAGTTA‑CCG‑T‑GCAGGGC‑AAAACCCCCCTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACCGAACTCCTTCCGAAGCTGCGCCCCGTAcctgtctcttttaccc > 2:1240723/1‑224 (MQ=255)
ccgtcacatccacaccgCAGGGCGT‑TTAA‑‑G‑TGGGGGGAACTCGG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAAc < 1:425158/223‑1 (MQ=255)
ttCCCCCCAGCAGGGCGT‑TTAA‑GG‑TTGGGGAAA‑CCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGc < 2:1047455/144‑1 (MQ=255)
ccccaGCATGGCTG‑TTAG‑GT‑TTGGGGGAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGAc < 2:557911/237‑1 (MQ=255)
ccatcttgggttgtAA‑GG‑TGGCGGTAA‑ACAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCa < 1:795031/226‑1 (MQ=255)
aGCGTGTCGG‑TTAT‑GG‑TGGGGGAAA‑TCAG‑C‑AAT‑CCCGCCA‑CTTTTA‑CCCGATTTTACGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGATTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCaaa < 2:1418366/239‑1 (MQ=255)
cATGGCGG‑TTAA‑GG‑TTGCGGGGA‑TCAG‑C‑AAG‑CCCGCCC‑CTTTTA‑CCCGATTTTTCGGGGCGG‑CAGGGAAGGACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTT‑CCG‑T‑GCAGGGC‑AAAACCCCCCTCCGGGAACAACGATTTCAACGGCTCGGCGCGCCAACAGAACTCTTGCAGATGCTGCGGCCAGTACATCTTAATGCCGCCTTCAACAGCTGTCCGGCCACAGa > 1:555348/1‑239 (MQ=255)
cATGGCGG‑TTAA‑GG‑GTGCGGGAA‑TCAG‑C‑AAG‑CCCCCCA‑CCTTTA‑CCCGATTTTCCGGTGCGG‑CAGGGAAGTACATCGCTAAAGAAA‑TTCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGGACAACGATTTCAGCGGCTCGGCGCCCAAACTGCACTCTTTCAGATGCTGCGGCCCGGACATCTCAATGCCCCCCTCAACaaccgtcgggcccaaca > 1:1477959/1‑223 (MQ=255)
ccGG‑TTAA‑GG‑TTGGGGAAA‑CCAG‑A‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGAt < 2:1557621/235‑1 (MQ=255)
cGG‑TTAG‑GT‑TTGCGGAAA‑CAGG‑C‑AAG‑CCCGCCA‑CTTTTC‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATaaa < 2:1566291/238‑1 (MQ=255)
cGG‑TTAA‑GG‑TTGCGGAAA‑TCAC‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTGCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATaaa < 2:1666384/238‑1 (MQ=255)
ggtttgggg‑TGGCGGAAA‑CCAC‑C‑ACG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATaaa < 1:1314174/231‑1 (MQ=255)
gaggg‑TTGCGGAAA‑ACAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTc < 1:964818/236‑1 (MQ=255)
ttGCGGGAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGCCCAAAGATAAACTGTCCGGAg > 1:1319105/1‑239 (MQ=255)
ggCGGGAA‑GCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGa < 2:580041/238‑1 (MQ=255)
gggAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGa > 1:368643/1‑239 (MQ=255)
gAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGaa < 2:840986/238‑1 (MQ=255)
gAA‑TCAG‑A‑ACG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGaa < 2:310832/238‑1 (MQ=255)
tCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGAtg > 1:589813/1‑166 (MQ=255)
|
ATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑TTGCGGGAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGAA > NC_000913/3862434‑3862903
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
