Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F9 I0 R1
|
142 |
103.7 |
2603848 |
81.8% |
2129947 |
227.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
1,425,607 |
G→T |
10.5% |
L77L (CTG→CTT) |
ynaK → |
Rac prophage, conserved protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,425,607 | 0 | G | T | 10.5%
| 245.0
/ 5.1
| 98 | L77L (CTG→CTT) | ynaK | Rac prophage, conserved protein |
| Reads supporting (aligned to +/- strand): ref base G (17/68); new base T (10/2); total (28/70) |
| Fisher's exact test for biased strand distribution p-value = 2.99e-05 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
TATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCG‑TATGCGCACAACGCCAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGAAAGTATTAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAGGTGGATTCTGTTGATGATTTACTCATTGATAATGCCGCTCGTTATCTGCTGAAAGACTGGAAAGGGGTTGGTGAACTGGTTAATGGTGTTGAGGTTGCA > NC_000913/1425376‑1425845
|
tATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCG‑TATGCGCACAACGCCAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGAAAGTATTAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCCTTGTTCTTTCTTGc > 2:612056/1‑238 (MQ=255)
tGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCG‑TATGCGCACAACGCCAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGAAAGTATTAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑GAATGCTCAAAATGGGATCTTTTTCGGTCATTTTTTTTTCTGGCCtt > 2:1188/1‑238 (MQ=255)
cGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCG‑TATGCGCACAACGCCAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGAAAGTATTAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCCAAATGGATTTTGTTCCGGTCGTTGTTTTTGTTGGCCTGACgg > 2:1126491/1‑239 (MQ=255)
ggaaaaTTAAAGATAGTCTTTCCCCCATTACAAGAATTGTCACCG‑TATGCGCACAACGCCAGGACGCACAGTACTGGGCAGGTGGCACAACTGGTAGAAAGTATTAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGa < 1:301926/236‑1 (MQ=255)
agaAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCG‑TATGCGCACAACGCCAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGAAAGTATTAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGa < 2:1045409/238‑1 (MQ=255)
aaaTTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCG‑TATGCGCACAACGCCAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGAAAGTATTAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑GAAAGCTTCAAAAGGATTCTGTTCCGGGCATTTTTTTTGCTGGCCGGACgggggg > 2:621338/1‑235 (MQ=255)
aaaGATAGTCTATCGCCCATTACAAGAATTGGCACCG‑GATGCGCACAACGCCAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGAAAGTATTAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGa < 2:96454/239‑1 (MQ=255)
ttggcttgggCCCATTGCAAGAATTGGCACCG‑TATGCGAACAACGGCAGGACGCAAAGTTCGGAGCAGGTGGCACAACTGGTAGAAAGTATTAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAagc < 2:1209544/228‑1 (MQ=255)
tagccagtcgccctcttaaagtgttGTCCCCG‑TATGCGCACAATCGCGGGGCGCACAGTGCTGAGCGGGTGGCACAACGGGTAGAAAGTATTAAGCAATTCGGCTGGGCTAATCCGGGGCTGATTGACGAAAAGGGCGAAATTATTTCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGcagcagcag < 1:852841/216‑1 (MQ=255)
tAGTCTACCGCCCATTACAAGAATTGTCACCG‑TATGCGCACAACGCCAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGAAAGTATTAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAagcag < 2:374472/239‑1 (MQ=255)
gctccttcccccgttcAATAATTGTCACCG‑TATGCGCACAACGCAAGGAGGCAGAGTTATGAGCAGGTGGCACACCTGGTAGAAAGTATTAAGCAATTCGGGTGGACTAATCCGGTGCTGATTGAGGAAAAGGGCGAAATTATTGCGGGTC‑ACGGGCGTGTTATGGCGGCAG‑AAATGCTCAAAATGGATTCTGATCCGGATATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCg < 1:555255/224‑1 (MQ=255)
ttccGCCCATTTAAAGAATGGTCACGG‑TAGGGCTAAAACGCCAGGACGACCAGTACTGAGCAGGTGGGACAACTGGTAGAAAGTATTAAGCAATTGGGCTGGATTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGGC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATa < 1:1126491/236‑1 (MQ=255)
tATTGCCCATTTCAGAAGTTGTAACCG‑TATGGAGAAAACGCCAGGAAGGACCGTACTGATGAGGGGGAAAAACTGGTAGAAAGGAGTAAGCAATTCGGCTGGACTAACCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATa < 1:201066/239‑1 (MQ=255)
tATCGCCCATTACAAGAATTGTCACCG‑TATGCGCACAACGCCAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGAAAGTATTAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATa < 2:617277/239‑1 (MQ=255)
attCGCCCATTACAATGATTGGCACCGTTAGGCG‑ACCACGCCAGGACGCACAGTACTGAGCAGGTGGCAAAACTGGTAGAAAGTATTAAGCAATTCGGCTGGACTGATCCGGTGCTGATTGACGAAAAGTGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATa < 2:647718/237‑1 (MQ=255)
ccATTACAAAAATTTTGACCG‑TATTCGCACAACGCTAGGACTCACAGGACTGTGCAGGTGCCACAACTGGGAGAAAATAATAAGACATTCGGCTGGACTAATCCGGTTCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCACAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATc < 1:1188/239‑1 (MQ=255)
aTTACAAGAATTGTCACCG‑TATGCGCACAACGCCAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGAAAGTATTAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGGCATTGTTTTGTCTTGCCTGCCGGATGAGCAGAAACAGCGATAACGAtacg > 2:1170580/1‑236 (MQ=255)
aTTACAAGAATTGTCACCG‑TATGCGCACAACGCCAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGAAAGTATTAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGAGTCTGTTCCGGTCATTGTTCTTTTCGGCCGTACGGATGATCGCAAGCAACGATAACGATccg > 2:315452/1‑237 (MQ=255)
aTTACAAGAATTGTCACCG‑TATGCGCACAACGCCAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGAAAGTATTAAGCAATTCGGCCGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGGCG‑GAAAGCTGCAAAAGGGTTCTTATCCCGTCGTTGTTTTGTCTGGAGCGACGGAGGCGCAGAagcaaaaaacacaaagcg > 1:420584/1‑225 (MQ=255)
tACAAGAATTGTCACCG‑TATGCGCCCAACGCCAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGAAAGTATTAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATa < 2:1272993/229‑1 (MQ=255)
aCAAGAATTGTCACCG‑TATGCGCACAACGCCAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGAAAGTATTAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTAt < 2:71561/239‑1 (MQ=255)
gTCACCG‑TATGCGCACAACGCCAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGAAAGTATTAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAAAGGATTCTGTTCCGGTCATTGTTCTTTCTGGCCTGACGGATGAGCAGAAGCAGGGGTAACCAtacgcaatggtcccgg > 2:404483/1‑224 (MQ=255)
tCACCG‑TATGCGCAAAACGCCAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGAAAGTATTAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTa < 2:70541/239‑1 (MQ=255)
gaCCG‑GATGCGCACAACGCTGCGACCCACAGTTCTGGGTAGGTGGGCAAACTGGTAGAAAGTATTAAGCAATTCGGCTGGGCTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTaa < 1:1120555/238‑1 (MQ=255)
cACCG‑TATGCGCACAACGCCAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGAAAGTATTAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTa < 2:1163325/238‑1 (MQ=255)
cACCG‑TATGCGCACAACGCCAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGAAAGTATGAAGCAATTCGGCGGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCGCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTa < 2:648377/238‑1 (MQ=255)
ccccctATGCGCCCCACGCAAGGACGCACAGTGCTGGGGGGGTGGCACAACTGGTAGAAAGTATTAAGCAATTCGGCTTGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTaa < 1:696549/234‑1 (MQ=255)
tATGCGCACAACGCCAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGAAAGTATTAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAAAGCTCAAAATGGATTCTGTTCCGGTCATTTTTCTTTCTGGCCTGACGGGTGAGCAGAAGCAGCGATAACGATCATAATCGCTCCCGGAATG‑CAt > 2:260565/1‑239 (MQ=255)
aCGCCAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGAAAGTATTAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTGTAAGTGC‑CCAAATGGATGTTGTTCCGTGGCTTGTTTTTTTTGGCCTGTCGGATGTGCCAAAGCAGCGGAAACGCACATTATCACTcccccaaacgatataacccgc > 1:988319/1‑220 (MQ=255)
actgaatggtcggggtaGGGGGCATAAGGGGTAGGAAGTAATAAGCAATGCGGCTGGACTAATCCGGGGCTGATTGACGAAAAGGGAGAAATTATTGCGGGTG‑TGGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATGCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCcaca < 1:248917/220‑1 (MQ=255)
cacattcctgggtcggTGGCACAACTGGTAGAAAGTATTAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATGGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTgaga < 1:612056/225‑1 (MQ=255)
cacaGTACTGAGCAGGTGGCACAACTGGTAGAAAGTATTAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAAt < 2:546248/222‑1 (MQ=255)
acaGTACTGAGCAGGTGGCACAACTGGTAGAAAGTATTAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGGTAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCTTCGCCCCA‑TTGTGaa > 2:843935/1‑239 (MQ=255)
tACTGAGCAGGTGGCACAACTGGTAGAAAGTATTAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGc < 2:697351/173‑1 (MQ=255)
tACTGAGCAGGTGGCACAACTGGTAGAAAGTATTAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTa < 2:468724/207‑1 (MQ=255)
tACTGAGCAGGTGGCACAACTGGTAGAAAGTATTAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGAGATAACGATCAGTATTGCCCCCGTAATG‑AATTAATCCGTCGCCCCA‑TTTGGAAAATg > 2:1104114/1‑239 (MQ=255)
tACTGAGCAGGTGGCACAACTGGTAGAAAGTAATAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGa < 2:275539/176‑1 (MQ=255)
aGCAGGTGGCACAACTGGTAGAAAGTATTAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTTTTGTGTCTGGCCTGACCGGTGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCCTAATG‑CATTAATCAGTCGCCACA‑TTGAGAAAATGGATg > 2:122167/1‑238 (MQ=255)
gTGGCACAACTGGTAGAAAGTATTAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTACGGTCATTTTTTTCTCTTGCCTGAAGGGTGAGGCAAAGACGCGAGACCGTGCACTATCGAGCCCGCACTG‑CTTTAATCAGCCGCCCCA‑ATGAAGAAATGGAAGCCacat > 1:927499/1‑236 (MQ=255)
gTGGCACAACTGGTAGAAAGTATTAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCAG‑AAATGGTCAAAATGGAGTCTGTTCCGGTCATTGTTCTTTCTTGCCTGCAGGATGAGCCGGAGCAGCGGAAACCACCAGTATCGTCCCCGTAATG‑CATTAATACGTCGTCACC‑TTGAGGAAAAGGATGCCAG‑tt > 2:778404/1‑239 (MQ=255)
ggCACAACTGGTAGAAAGTATTAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTAt < 2:137266/185‑1 (MQ=255)
aaaggttgaaaaGTATTAAGCAATTGGGCTGTAGGAATTCGGTGTAGGTTCAGGAAAAGGGGCAAATTAGTGGGGGTC‑ACGGTACTTTTATGACGGCTG‑AAATGCTCAAAATGGAGTCTGCTCCGGTCATTGTTCTGTCTGGCCTGACGGATGTGCAGAAGCAGGGATAGCGATCAGTATCGCTCCCGTAATG‑CATTAAACCGTCGCCACA‑TTTAGAAAATGGATACGAG‑TTTGCACG‑t < 1:272332/230‑1 (MQ=255)
aaCTGGTAGAAAGTATAAAGCAATGCGGCTGGTCGAATCTGGTGCGAATAGGCTAGAAGGGCGAAATTATTGCGGGTC‑ACTGTCGTGTTATGGCGGCTG‑CAATGCTCAAAATGGATTCTGTTCCGGGCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑t < 1:461500/239‑1 (MQ=255)
aaaaGTATTAAGCAATGCGGCCGGACTAATCCGGTGATGATTGACGAAAAGGGCGAAATTATGGCGGGTC‑ACGGTCGGGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGa < 2:798975/238‑1 (MQ=255)
aaGTATTAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGa < 2:1225957/237‑1 (MQ=255)
aaGTATTAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAg < 2:769782/239‑1 (MQ=255)
aggaaatCGGCTGGGCTAATTCGGTGCTGATTGAACAAAAGGGCGAAATTATTGCGGGTC‑ACGGTTGTGTTATTGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGa < 2:204692/233‑1 (MQ=255)
aGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGa < 2:329528/239‑1 (MQ=255)
ttCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATTCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTTTTGCTCCCGTAATG‑CATTAATCCGTCGCCCCA‑TTTGGAAAAAGGATGCCCG‑ATTGCCAG‑TCGGAACGAAGGG‑GGTTGGA‑Attt > 2:99836/1‑239 (MQ=255)
tcgCTTGACTAATCCGGTGGTGATTGACGAAAAGGGGCAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGGTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCa < 1:260565/237‑1 (MQ=255)
cgggACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCaaa < 2:611642/236‑1 (MQ=255)
atGGACTAATCCGGGGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCaaa < 2:128558/237‑1 (MQ=255)
gACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGa < 2:316116/226‑1 (MQ=255)
tAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑CCGGTCGGGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTcc < 2:576985/239‑1 (MQ=255)
tAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGGC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTcc < 2:494234/239‑1 (MQ=255)
aTCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATGTTGGTCCGGGCATTGTTTTTTCTGGCCTGAAGGCTGAGCCGAAACAGCGCACAAGAGTAGCATTGCTCCCGTGAGA‑CACTTAACCATGGCCCCA‑CTGAGAAAAATGGTACCCG‑GTTGCACGCTCGGAA‑GCAGGAGGTTAGAG‑ATTTAAAAGGtgccga > 1:611642/1‑234 (MQ=255)
tCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGttt < 2:1022107/234‑1 (MQ=255)
tCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAg < 2:849987/239‑1 (MQ=255)
tCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGGTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAg < 2:1237946/239‑1 (MQ=255)
tGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAGGTGGAtt < 2:1093074/238‑1 (MQ=255)
aTTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGCCGGATGAGCAGAAGCAGCGATAACAATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑CCGGAACGAAGGA‑GTTTGGT‑TATTCAAAGGGTTCCCGGGGGGATTTTg > 2:45030/1‑239 (MQ=255)
aTTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCCCAAAATTGGTTCTGTTCCGGTCCTTTTTTTGTCTGTGCGGAACGTCTAGCAGCAGGAGCGATAAAGAACAGGATCGCCGCCGTAATT‑AATTTATCCGTTGCCCCA‑TTGGGAAAATGGAAGCCCGCTTGGAACG‑T‑GGAACGAAGGG‑GGTTGTA‑ATTTTAAAGGTTTCCGGGGGGGGttagt > 1:1022107/1‑236 (MQ=255)
ttcGAAAAGGGCGAAATTTGGCCGGGTCTGGGGTTGT‑TTATGGCGGGTG‑AAATGTTCAAAATGGGTTTTGTTGCGGTCATTTTTCTGTCTGGCCTGACGGATGAGGAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGGCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAGGTGGATTCTGTtg < 1:66299/237‑1 (MQ=255)
tgagAAAAGGGGGAAATGATTGCTGGTC‑AAGGTCGTGTTATGGCTGCTG‑AAATGATCAAAATGGATGCTGATCCGGTCATTTATCTGTCGGGCTGGGCGGAGGAGCAGAAGCAGCGATAACTGTCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAGGTGGATTCTGtgg < 1:976398/236‑3 (MQ=255)
gatgAAAAGGGGGGAATGTGTGGGGGTT‑GCGGTCTATTTTTGGCGGGTG‑AAATGCTCAAAATGGATTCCGTTTCGGTCAGTGTTCTGTCTGGCCTGACGGATGAGTCGAACGAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAGGTGGATTCTGTtg < 1:1089/236‑1 (MQ=255)
aCGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGc < 1:668895/132‑1 (MQ=255)
aCGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGc > 2:668895/1‑132 (MQ=255)
aaGGGGGAAATTTTTGCGGGTC‑GCGGTGGTTTTATGGCGGCTG‑AAATGCTCAAAATTGATTCTGTTCCGGTCATTTTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAGGTGGATTCTGTTGATGAtt < 1:45030/239‑1 (MQ=255)
ggtaaaTTGTGGCGGGTC‑ACGGTCGTGTTATGGCGTCTG‑AAAGGCTCAAAATGGATTCTGGGCCGGTCATTTTTCTGTCTGGCCTGAAGGATGAGCAGAAGCAGCGATAACGTTGAGTAGCGCTCCCGTAATG‑CATTAATCCGGCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAGGTGGATTCTGTTGATGATTTa < 1:16124/234‑1 (MQ=255)
ggTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGGTTCTTTTCCGGGCTTTTTTCTGTCTGGCCTGACGGATGAGCAGAAGAAACGGTAAAGATCAGTATCCCTCCCGGAAAGCCATATAACCTGCG‑CACATTTGAGAAAATGAGTGCCGT‑CTTGAAC‑‑TCCGACAGAGGGC‑GTTTTATAATTTCAAAGGTTCCCAAGG‑GGGGTCTTTTTGTGCTTTTCTCATTTATaaaaacg > 1:969946/1‑234 (MQ=255)
ttgtTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAGGTGGATTCTGTTGATGATTTACTCATTGATAATGCCGCTCGTTATc < 2:468176/237‑1 (MQ=255)
ggcggcTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAGGTGGATTCTGTTGATGATTTACTCATTGATAATGCCGCTCGTTATCTGCTGaaa < 2:1159783/239‑1 (MQ=255)
ggcggcTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGGTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAGGTGGATTCTGTTGATGATTTACTCATTGATAATGCCGCTCGTTATCTGCTGaaa < 2:884814/239‑1 (MQ=255)
gcggcTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGGGGTGGATTCTGTTGATGATTTACTCCTTTATAATTCCGCTCGTTTTCTGCTGAAAg > 2:954529/1‑239 (MQ=255)
ggcTG‑AAATGTTCAAAGTGGATTTTGTTCGCGTCATTTTTTTGTGTGGCCTGAGGGATGAGAAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CCTTAATGCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAGGTGGATTCTGTTGATGATTTACTCATTGATAATGCCGCTCGTTATCTGCTGAAAGa < 1:122167/238‑1 (MQ=255)
ggcTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAGGTGGATTCTGTTGATGATTTACTCATTGATAATGCCGCTCGTTATCTGCTGAAAGa < 2:494778/238‑1 (MQ=255)
g‑AAATGCCAAAAATGGATTCTGTTCCGGTCATTGTGCTGTCTGGCCTGACGGATGAGAAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAGGTGGATTCTGTTGATGATTTACTCATTGATAATGCCGCTCGTTATCTGCTGAAAGACTGGa < 2:1011201/239‑1 (MQ=255)
aaTGGTCAAAATGGATTCCGTTCCTGTCAGTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAGGTGGATTCTGTTGATGATTTACTCATTGATAATGCCGCTCGTTATCTGCTGAAAGACTGGaa < 2:697674/238‑1 (MQ=255)
tggtCAAAATGGAATCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAGGTGGATTCTGTTGATGATTTACTCATTGATAATGCCGCTCGTTATCTGCTGAAAGACTGGAAAgg < 2:155055/236‑1 (MQ=255)
tGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAGGTGGATTCTGTTGATGATTTACTCATTGATAATGCCGCTCGTTATCTGCTGAAGGACTGGaaatg > 2:706182/1‑237 (MQ=255)
cAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGACGGG‑GTTTGAT‑ATTTCAAAGGTTTCCGAGGTGGATTCTGTTGATGATTTACTCATTGATAATGCCCAGGGTTTTTTGCTGAAAGACTGGAAAGGGGtt > 2:237319/1‑239 (MQ=255)
ggATTTTGTGCCGGTTATTTTGCTGTCTGGCCTGACGGATGAGCAGAAGCAGCTATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGGCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAGGTGGATTCTGTTGATGATTTACTCATTGATAATGCCGCTCGTTATCTGCTGAAAGACTGGAAAGGGGTTGGTGaa < 1:99836/239‑1 (MQ=255)
ggATTCTTTTTCGGTTAGTGTTCTTTCTGGCCTGGACGAAGAGCAAAAGGAGCGATAACGATCAGTATCGCTCCCGTAACG‑CAGTAATCCGACGCCACA‑TTGAGAAAATGGATTCCAG‑GTTGCACG‑TCGGAACGAAGGA‑GGTTGAT‑ATTTCAAAGGTTTCCGAGGTGGATTCTGTTGATGATTTACTCATTGATAATGCCGCTCGTTATCTGCTGAAAGACTGGAAAGGGGTTGGTGaa < 1:304156/239‑1 (MQ=255)
ggATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAGGTGGATTCTGTTGATGATTTACTCATTGATAATGCCGCTCGTTATCTGCTGAAAGACTGGAAAGGGGTTGGTGaa < 2:214647/239‑1 (MQ=255)
aTTCTGTTCCGGTCCTTGTTCTGTTCGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAGGTGGATTCTGTTGATGATTTACTCATTGATAATGCCGCTCGTTATCTGCTGAAAGACTGGAAAGGGGTTGGTGaa < 2:643198/237‑1 (MQ=255)
aTTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAGGTGGATTCTGTTGATGATTTACTCATTGATAATGCCGCTCGTTATTTGTTGAAAGAGGGGAAAGGGGGTGGTGaagg > 1:575269/1‑237 (MQ=255)
aTTCTGTTCCGGTCATTGTTCTGGCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAGGTGGATTCTGTTGATGATTTACTCATTGATAATGCCGCTCGTTATCTGCTGAAAGACTGGAAAGGGGTTGGTGaa < 2:478414/237‑1 (MQ=255)
cTGTTCCGGTCATTGGTCTGGCCGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAGGTGGATTCTGTTGATGATTTACTCATTGATAATGCCGCTCGTTATCTGCTGAAAGACTGGAAAGGGGTTGGTGAACTGGt < 2:420584/239‑1 (MQ=255)
gTTCCTGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAGGTGGATTCTGTTGATGATTTACTc < 1:207886/181‑1 (MQ=255)
gTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAGGTGGATTCTGTTGATGATTTACTc > 2:207886/1‑181 (MQ=255)
tCCGGTTATGGTTCTTGCTGGCCTGACGGATGAGCAGAAGCAGCGAAAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTGCAAAGGTTTCCGAGGTGGATTCTGTTGATGATTTACTCATTGATAATGCCGCTCGTTATCTGCTGAAAGACTGGAAAGGGGTTGGTGAACTGGTTaa < 2:1206657/238‑1 (MQ=255)
tCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAGGTGGATTCTGTTGATGATTTACt > 2:767312/1‑178 (MQ=255)
tCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAGGTGGATTCTGTTGATGATTTACt < 1:767312/178‑1 (MQ=255)
tCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAGGTGGATTCTGTTGATGATTTACTCATTGATAATGCCGCTCGTTATCTGCTGAAAGACTGGAAAGGGGTTGGTGAACTGGTTaa < 2:416377/238‑1 (MQ=255)
aTTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGACAGAGGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAGGTGGATGCTGTTGTGGTTTTCATCTTTGTTAATGCCGCTCGTTTTCTGTTGAAAACTTGGATAAGGGTTGGGGaaaggggaaagggtgtgt > 1:1105631/1‑223 (MQ=255)
aTTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAGGTGGATTCTGTTGATGATTTACTCATTGATAATGCCGCTCGTTATCTGCTGAAAGACTGGAAAGGGGTTGGTGAACTGGTTAATGGTGTTg < 2:988319/239‑1 (MQ=255)
gTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAGGTGGATTCTGTTGATGATTTACTCATTGATAATGCCGCTCGTTATCTGCTGAAAGACTGGAAAGGGGTTGGTGAACTGGTTAATGGTGTTGAgg < 2:927499/239‑1 (MQ=255)
gTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAGGTGGATTCTGTTGATGATTTACTCATTGATAATGCCGCTCGTTATCTGCTGAAAGACTGGAAAGGGGTTGGTGAACCGGTTAATGGTGTTGAgg < 2:683065/239‑1 (MQ=255)
tgtctgGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAGGTGGATTCTGTTGATGATTTACTCATTGATAATGCCGCTCGTTATCTGCTGAAAGACTGGAAAGGGGTTGGGGAACTGGTTAATGGTGTTGAGGTTGc > 2:1291652/1‑239 (MQ=255)
gtctgGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAGGTGGATTCTGTTGATGATTTACTCATTGATAATGCCGCTCGTTATCTGCTGAAAGACTGGAAAGGGGTTGGTGAACTGGTTAATGGTGTTGAGGTTGCa < 2:483728/239‑1 (MQ=255)
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TATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCG‑TATGCGCACAACGCCAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGAAAGTATTAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTC‑ACGGTCGTGTTATGGCGGCTG‑AAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAACGATCAGTATCGCTCCCGTAATG‑CATTAATCCGTCGCCACA‑TTGAGAAAATGGATGCCAG‑TTTGCACG‑TCGGAACGAAGGA‑GTTTGAT‑ATTTCAAAGGTTTCCGAGGTGGATTCTGTTGATGATTTACTCATTGATAATGCCGCTCGTTATCTGCTGAAAGACTGGAAAGGGGTTGGTGAACTGGTTAATGGTGTTGAGGTTGCA > NC_000913/1425376‑1425845
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
