Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A2 F9 I0 R1 142 103.7 2603848 81.8% 2129947 227.3

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,662,718 T→G 13.2% V769G (GTG→GGG)  mdtF → anaerobic multidrug efflux transporter, ArcA‑regulated

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,662,7180TG13.2% 192.7 / 3.7 96V769G (GTG→GGG) mdtFanaerobic multidrug efflux transporter, ArcA‑regulated
Reads supporting (aligned to +/- strand):  ref base T (19/59);  new base G (13/4);  total (33/63)
Fisher's exact test for biased strand distribution p-value = 8.84e-05
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CGAAAAACTAACCCAGGCGCGAAACGAGCTGTTATCACTGGCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTC‑TGCCTACTCGTCTACCGAATGGACCTATGGTTCACCGCGACTGGAACGCTACAACGGCATCCCGTCAATGGAGATTTTAGGTGAAGCGGCGGCCGGGAAAAGTACCGGTGACGCCATGAAATTTATGGCAGACCTGGTCGCTAA  >  NC_000913/3662482‑3662955
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                 
cGAAAAACTACCCCAGGCGCGAAACGAGCTGTTATCACTGGCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAgtgt                                                                                                                                                                                                                                                 <  2:444914/239‑1 (MQ=255)
                 cgcgaccccggggttcttcccgggCCGCCCAATCCCCGAACCAGGGCCACGGGGCACGCACGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTAAACGCC‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACAAGCAAATTTCCACCGCCTTCGGCATCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACg                                                                                                                                                                                                                               <  1:1282745/217‑1 (MQ=255)
                 cgcgAAACGAGCTGTTATCACTGGCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCAACGTGAACGACTTCCTCAACCAAGGCCGGGGGGAAAAAAGGGAAGGT‑caggca‑ggacac                                                                                                                                                                                                                               >  1:1229694/1‑235 (MQ=255)
                  gcgAAACGAGCTGTTATCACTGGCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACg                                                                                                                                                                                                                               <  2:237045/238‑1 (MQ=255)
                   ggAAACGGGCTGTTATCACTGGGAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑cc                                                                                                                                                                                                                            <  2:831928/238‑1 (MQ=255)
                      aaCGGGTTGTTATCCCTGGGAGGCCAATCCCCAAACCCGGCCCCGGGGGTACGCCCGAACGGCCTGGAAGATACGCCGAGTTTCAAAGGTAACGTCAACGCT‑GCGAAAGCTGAAGCTATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAGCCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGtt                                                                                                                                                                                                                         <  1:847051/239‑1 (MQ=255)
                               ttATCACTGGCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGGGGATTGCCCGGCA‑GGCCCG‑CCGTTCCGTA‑TGtt                                                                                                                                                                                                               >  2:344364/1‑239 (MQ=255)
                                ttacaatggcgcgcaaagcACCGAAACAGGGCCCCGGGGTACCACCGAACGGCCTGGACGATACGCCGATGTTCAAAGTGAACGCCAACGCC‑GCGAAAGCTGAAGGGATGGGAGGGGGGCTGTCTGGTATCAACCAGACAATTACCACCGCCTTCGGCAGCAGCTACGTGAACGGCTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTg                                                                                                                                                                                                              <  1:285440/221‑1 (MQ=255)
                                tagcccTGGCCGCGCAATCCCCGAATCAGGTCACGCGGGTTCGCCCGAACTGCCTGGAAGATACGCCGAGTTGCAAACGTAACGTCAACGCG‑GCGAAAGCGGAAGCGATGGGCGTGGCGGTGTCTGATATCAACCAGACAATGTCCACCGCCTTCGGAAGCAGATACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTg                                                                                                                                                                                                              <  1:1215029/234‑1 (MQ=255)
                                tATCCCTGGCAGCGCAATCACCGAATCAGGTACCCGGGGTACGCCCGACAGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTg                                                                                                                                                                                                              <  2:1185685/239‑1 (MQ=255)
                                     cTGGCAGCGCAATCCCCGAATAAGGTCACCGGGGTCCGGCGGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGa                                                                                                                                                                                                         <  2:1171574/239‑1 (MQ=255)
                                     cTGGCAGCCAAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTAAAAGTGAACGTCAACGCT‑GCTAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGa                                                                                                                                                                                                         <  2:1263720/239‑1 (MQ=255)
                                      tgccAGCGTAATCACCGCATCACGTCACCGGGGGCACCCCTACAGGGCTGTAAGATGCTCAGATTGACAAAGGTACATTCACAGCT‑GCAAAACCTGGAGATGTGGGCGTGGGCCTGTCTGATATCAACCAGACAATTCCCACCTCCTTGGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTAGGTCCAGGCA‑GGCACG‑CCGGTCCGTA‑TGTTGCCGGAt                                                                                                                                                                                                        <  1:830599/236‑1 (MQ=255)
                                       ggCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGCCTTCCTCAACCAGGGGC‑GGGGGAAAAAAGGGCATGTCCAGGCA‑GGCACG‑CCGTGCCGTA‑TGTTTCCGGGTa                                                                                                                                                                                                       >  2:253405/1‑239 (MQ=255)
                                         cAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCTTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCGGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGGGAATTTCCAGGCA‑GGCACG‑CCCTTCCGAA‑GGTGGCCgggaaaa                                                                                                                                                                                                     >  1:724751/1‑234 (MQ=255)
                                         cAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGGGGAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGGTCCGTA‑TGTTGCCGGGTAAc                                                                                                                                                                                                     >  2:29845/1‑239 (MQ=255)
                                         cAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACCCT‑GCGAAAGCTGAACCGATGGGAGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCGACTAGGTGAACGACTTCCTCAACCCGGGGA‑GGTCGGAAAAAGGGCAAGTCCACGCC‑GGCACC‑ACGATCCgcagtgtgccggggaaa                                                                                                                                                                                                      >  1:1223663/1‑223 (MQ=255)
                                          tgtctactccgcggatcctgTCACCGGGTTGCGCCAGAACGGCCTGGAAGATACGCCGATGTTCAAGGTGAACGTCAACGCC‑GCGAAAGATGAAGGGATGGGCGTGACCCTGTCTAATATCAACCAGACAATTACCACCGCCTTCGGCAGCAGTTACGTGAAGGACTTTCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCTTA‑TGTTGCCGGATAACa                                                                                                                                                                                                    <  1:995290/220‑1 (MQ=255)
                                           gcgcAATCCCCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACa                                                                                                                                                                                                    <  2:1218462/238‑1 (MQ=255)
                                           gcgcAATCCCCGAATCAGGTCACCGGGGTACGCCAGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACa                                                                                                                                                                                                    <  2:703448/238‑1 (MQ=255)
                                           gcgcAATCACCGAAGCAGGTCACCGGGGTCCGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACa                                                                                                                                                                                                    <  2:1061511/238‑1 (MQ=255)
                                           atgggtaaaagaagcagggTCACCGGGGTACGGCCGAACGGCCTGGAAGGTTCGCCGATGTTCAAAGTGAACGGCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGCCAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACa                                                                                                                                                                                                    <  2:211615/221‑1 (MQ=255)
                                           accgaggccccggttcgggTCACCGGGGGACGCACGGTCGGCGAGGAAGGTACGCCGGTGTTAAAAGTG‑ACGCCCAGACTGGCGAAAGTGTAAGCGATGTGCGGGGCGATGCATGATATCAACCAGACAATTTCCACGGCCTTCGGCATCAGCTACGTGATCGTCTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATACCAt                                                                                                                                                                                                   <  1:662554/222‑1 (MQ=255)
                                            cgcAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGCC‑GGGGGAAAAAAGTGTATTGCCAAGCA‑GGCACG‑CCGTTCCGTA‑GTGTGCCGGATAAAATc                                                                                                                                                                                                  >  2:22602/1‑239 (MQ=255)
                                             gcAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACACGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCAAC‑CCGTTCCGTA‑TGTTGCCGGGTaaactca                                                                                                                                                                                                 >  2:513862/1‑234 (MQ=255)
                                               aaTCCCCGAATCAGGTCACCGGGTTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACa                                                                                                                                                                                                    <  2:366645/234‑1 (MQ=255)
                                               aaTCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCaa                                                                                                                                                                                                <  2:212382/238‑1 (MQ=255)
                                               aaTCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCaa                                                                                                                                                                                                <  2:711328/238‑1 (MQ=255)
                                                   aCCGAATTGGGTCACCGGGGTACGCCCGAACGGCCTGGAAAATACGCGGATGTTCAAAGTCAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGAGCTGTCTGATATCAACCAGACAATTTCCACCGCCTGCGGCAGCAGCTACGTGAACGCCTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCa                                                                                                                                                                                             <  2:1296772/237‑1 (MQ=255)
                                                       aaTCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGGGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTTCCGGATAAAATCAACCAATGGTa                                                                                                                                                                                       >  2:188434/1‑239 (MQ=255)
                                                         tCAGGTCCTCGGGGAACGACCGAACGGCCTGGAAGATCCGCCGGTGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTAGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATg                                                                                                                                                                                     <  2:1291320/239‑1 (MQ=255)
                                                         tCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGTCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTCCGTGAACGACTTCCTCAACCAGGGGC‑GGGGGAAAAAAGGGGAGGTAGAGCCA‑AGACTG‑CCGTTCCGCG‑TGTGGCCGGaaaaataaaacaaaaggcgt                                                                                                                                                                                      >  1:366645/1‑222 (MQ=255)
                                                         tCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGGGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCCAG‑CCGGTCCGGA‑TGTTGCCGGATAACATCAACCAATgggaag                                                                                                                                                                                     >  2:116439/1‑235 (MQ=255)
                                                               cACCGGGGTACGGCCGAACGGCCTGGAAGAAACGCCGATGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCa                                                                                                                                                                               <  2:753844/239‑1 (MQ=255)
                                                               cACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAAGTACATCCCCAAACAGGGGA‑GGGGGGAAAAAGTGTAGGGCCAGGAC‑GCCCCA‑GCGTTCCGGT‑TGTTGACGGCTCACAACGACCAAggggaggcaagca                                                                                                                                                                               >  1:778795/1‑229 (MQ=255)
                                                                aCCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCaa                                                                                                                                                                              <  2:1219514/239‑1 (MQ=255)
                                                                  cGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGGGTATGTCCAGGCA‑GGCACG‑CCGTTCCGGA‑ACTTTCCGGGTAACATCAACCAATGGTATGTACGCAAc                                                                                                                                                                             >  2:1062057/1‑238 (MQ=255)
                                                                      ggaCGCCCGGACGGCCTGGAAGATGCGCCGATGTGCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTTCCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCct                                                                                                                                                                         <  2:32594/236‑1 (MQ=255)
                                                                               aaCGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCAAG‑CCGTTCCGTA‑TGTTTCCGGGTAACATCAACCCATGGGTTGGACGCAACGCCTCCGGCACGAt                                                                                                                                                               >  2:294446/1‑239 (MQ=255)
                                                                               aaCGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGGGAAAAAAGGGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTC‑TGTTGCCGGATAAAATCAACCAATGGTATGTACGCAAAGCCTCTGGCACGAt                                                                                                                                                               >  2:725369/1‑239 (MQ=255)
                                                                                    gcgggAAGATACGACGAGTGTCAAAGGGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGGGGCGCTGTCTGATAGCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCa                                                                                                                                                           <  2:444958/235‑1 (MQ=255)
                                                                                    ccTGGAAGGTCCGCCGATGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGTCGGGGCGCTGTCTGATATCAACCAGACAATTTCCCCCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCa                                                                                                                                                           <  2:1224898/238‑1 (MQ=255)
                                                                                        gaaagttcGCCGGTTTTCAAAGTTAACTGCCAAGCT‑GGGAAAGCGGAAGGGAGGGGCGTGGCGCTGCTTGATACAAACCAGGCAATTTCCACCGGCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGTTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCt                                                                                                                                                      <  1:1088682/232‑1 (MQ=255)
                                                                                         aaGATACGCCGATGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCCGCAGCTCCGTGAACGACTTCCTCAACCAGGGTC‑GGGGGAAAAAAGGGTATTTCCCGCCA‑GGCACC‑CCGTTCCGGA‑TGTTGCCGGGTAAAATAAACCAATGGGAATAAAGCAACGCCCCGTGCACCATggacccccgt                                                                                                                                                     >  1:217890/1‑231 (MQ=255)
                                                                                           attACGCCGTTTTTTAAGGGGAACCGCACCGCA‑GCGAAAGCGTAAGCGGGGGGCGGGGCGCTGTCAGATATCAACCAGAAAATTTCCGCCGCCTTCGGCAGCAGCCACGTGAACGACTTCCGCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCttt                                                                                                                                                    <  1:29845/236‑1 (MQ=255)
                                                                                              aCGCCGATGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTC‑Tg                                                                                                                                                >  2:1233751/1‑238 (MQ=255)
                                                                                              aCGCCGATGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGGATGTCCCAGCA‑GGCACG‑CCGTTCCCTA‑TGTTGCCGGATAACATCAACCAATGGGATGTACGCAAACCCCCGGGGACGAGGGCAcccgtatcgg                                                                                                                                                 >  1:154638/1‑230 (MQ=255)
                                                                                               cggcGATGTTCAAAGTAAACGTCAACGCC‑GGGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTC‑TGcc                                                                                                                                              <  2:198409/236‑1 (MQ=255)
                                                                                               cGCCGATGTTCAAAGTGAACGTCAACGCT‑GGGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTC‑TGcc                                                                                                                                              <  2:724751/239‑1 (MQ=255)
                                                                                                  cggtGTTCAAAGTGAACGTCACCGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTC‑TGCCTa                                                                                                                                            <  2:778795/235‑1 (MQ=255)
                                                                                                  cGATGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGGGAAAAAAGTGTATGTCCAGGCC‑GGCACG‑CCGCTCCGGA‑TGTTTCCGGATAAAATTAACCAACGGTATGGACCCAACCCCCCTTGCAccagtgcaacggcatcccacca                                                                                                                                             >  1:111210/1‑217 (MQ=255)
                                                                                                  cGATGGTCAAAGTGAAAGTCAACGCC‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACAGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTC‑TGCCTa                                                                                                                                            <  2:609104/238‑1 (MQ=255)
                                                                                                    aTGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGGATGTTCAGGCA‑GGCACG‑CCGTTTCCTA‑CGGTGCCGGATAAAACCAACCAATGGGATTATCGCAACCCCCCTGGCAAGAATGCACCCCCTTC‑CGCCTACTc                                                                                                                                         >  1:977454/1‑239 (MQ=255)
                                                                                                              tGAACGTCAACGCT‑GCGAAAGCTTAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTC‑TGCCTACTCGTCTACCGaa                                                                                                                               <  2:356304/239‑1 (MQ=255)
                                                                                                               gaccGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGTGCTGTCTGATATGAACAAGACAATTTCTCCCGCTTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGGATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTC‑TGCCTACTCGTCTACCGaa                                                                                                                               <  2:168513/235‑1 (MQ=255)
                                                                                                               gaactgcAACGGT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTC‑TGCCTACTCGTCTACCGAAt                                                                                                                              <  2:664907/233‑1 (MQ=255)
                                                                                                               gAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGGGAAAAAAGGGTATGTCCAGGCA‑GGCCCG‑CCGTTCCGTA‑TGTGGCCGGATAAAATCAACCAATGGAGTGAACGGAAGGCCTCCGGCACGCTGGCACGCCTTTC‑TGACTAATGGGCTACCGaag                                                                                                                              >  1:1059929/1‑238 (MQ=255)
                                                                                                               gAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATACCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTC‑TGCCTACTCGTCTACCGaa                                                                                                                               <  2:384702/238‑1 (MQ=255)
                                                                                                               gAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCGGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTC‑TGCCTACTCGTCTACCGaa                                                                                                                               <  2:977454/238‑1 (MQ=255)
                                                                                                                 aCGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAAAATCAACCAATGGGATGTACCCAACGCCTCTGGCCCGATGGAACCGCTTTC‑TGCCTACTCGTCTCCCgcaag                                                                                                                             >  2:701452/1‑234 (MQ=255)
                                                                                                                   gTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTC‑TGCCTACTCGTCTACCGAATGGAc                                                                                                                          <  2:901638/239‑1 (MQ=255)
                                                                                                                   gTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTC‑TGCCTACTCGTCTACCGAATGGAc                                                                                                                          <  2:200700/239‑1 (MQ=255)
                                                                                                                      ccacgcgaggaaagtgcagccGAGGGGCGTGGCGCTCGCATATATCACCCAACCAATTTCCACCCCCTGCGGCAGGAGCTCCGTGAACGACTTCCCCACCCAGGGGC‑GGGTGAAAAAAGTGTATGTACAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCCACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTC‑TGCCTACTCGTCTACCGAATGGACCt                                                                                                                        <  1:247182/219‑1 (MQ=255)
                                                                                                                              cGAAACCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCCGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGCAAAAAGTGTATGTCCAGGCA‑GTCACG‑CCCTTCCGCG‑TGCTGCCGTGTCACAACAACCCATGGTCTGAACGCGAAGCCTCTGCCACGATGGCCACGCTTTA‑CGCGTACTCATCTACCGGAGGGACCAAAGGTTCa                                                                                                                >  1:846263/1‑239 (MQ=255)
                                                                                                                                  aGCTGAAGCGATGGGCGTGGCGCGTGCTGATATCAACCAGACAATTGCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTC‑TGCCTACTCGTCTACCGAATGGACCTATGGTTCACcgc                                                                                                            <  2:32719/239‑1 (MQ=255)
                                                                                                                                     tGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTCCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCAc                                                                                                                                                          <  2:70394/191‑1 (MQ=255)
                                                                                                                                      gAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCTTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTC‑TGCCTACTCGTCTACCGAATGGACCTATGGTTCACCGCGAc                                                                                                         <  2:111210/238‑1 (MQ=255)
                                                                                                                                           gATGGGCGGGGCGCTGGCTGATACCAACCCAGCAAGTTCCCCCGCCTTCGGCAGCCGGTCAGTGACCGACTTCCGCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCCACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTC‑TGCCTACTCGTCTACCGAATGGACCTATGGTTCACCGCGACTGGaa                                                                                                    <  2:736234/238‑1 (MQ=255)
                                                                                                                                             tGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGCGAAAAAAGGGTATGTCCAGGCA‑GGCACA‑CCCGTCCGTAGTGTT‑CCGGATAACACAAACCAATGGGATGTAACAAACCCCACTGGCACGGATGCACCGCTTTC‑TTCCTACACCACCACCGAATGGACCTCTGGTTCACCGCGACTGGGACgg                                                                                                 >  1:952930/1‑238 (MQ=255)
                                                                                                                                                         tGTCTGATAACAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTC‑TGCCTACTCGTCTACCGAATGGACCTATGGTTCACCGCGACTGGAACGCTACAACGGCAt                                                                                      <  2:924566/238‑1 (MQ=255)
                                                                                                                                                           tCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGATACGTGAACGACTTCCTCAACCAGGGGC‑CGGGGAAAAAAGTGGATTGCCAGGAA‑GGCACG‑CCGTTCCGTC‑AGGTGCCGGATAAAATAAACCAATGGAATGGACGCCACGCCTCTGGCACCATGGCACCGCTTTC‑TTCCTAGTCGTCTACCCACAGTACCTATGGTGCACCGCGCCTGGAACgagccaaaagcaacac                                                                                   >  1:273630/1‑224 (MQ=255)
                                                                                                                                                                  tcccccataacttttCCGACGCCTTCGGCAGTCTTTACTTGTCGGCCTTCCCCACCCAGGGGG‑GGGTGAAAAAAGTGTATCGCCAGCCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACAGCAGCCAATTGTATGTACGCAACGTCTCGGGCACGATGGCACCGCTTTC‑GGCCTACTCGTCTACCGAAGGGACCTATGGTTCACCGCGACTGGAACGCTACAACGGCATCCCGTCAATg                                                                            <  1:253405/227‑1 (MQ=255)
                                                                                                                                                                  tCAACCAGACAATTGCCACCGCCTTCGGAAGCAGCTACGTGAACGACTTCCGCAAGCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTC‑TGCCTACTCGGCTACCGAATGGACCTATGGTTCACCGCGACTGGAACGCTACAACGGCATCCCGTCAATg                                                                            <  2:240529/239‑1 (MQ=255)
                                                                                                                                                                  ccAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTC‑TGCCTACTCGTCTACCGAATGGACCTATGGTTCACCGCGACTGGAACGCTACAACGGCATCCCGTCAATg                                                                            <  2:217890/238‑1 (MQ=255)
                                                                                                                                                                  acAACCCGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTC‑TGCCTACTCGTCTACCGAATGGACCTATGGTTCACCGCGACTGGAACGCTACAACGGCATCCCGTCAATg                                                                            <  2:1229694/238‑1 (MQ=255)
                                                                                                                                                                     aCCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGGGAAAAAAATGGAAGTCCAGGCA‑GGCAAC‑CCCTTCCGGA‑ATTTGCCGGATAAAATCAAACAATGGGTAGGACGCCCACCCTCCTGCCCGCTACGACCCCTTTCGTAGCTAC‑CGGCTTCCGAATGGTCCTATGGTTAACCCCGCCTGGAAACCCACAACGACAACCTGCCaaatgag                                                                         >  1:333613/1‑234 (MQ=255)
                                                                                                                                                                        ggcaaaTTTCCACCGCCTTCGGAAGAAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTC‑TGCCTACTCGTCTACCGAATGGACCTATGGTTCACCGCGACTGGAACGCTACAACGGCATCCCGTCAATGGAGAtt                                                                      <  2:910237/235‑1 (MQ=255)
                                                                                                                                                                              tttCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGAGAAAAAAGGGTATGTCCAGGCA‑GGCACG‑CCCTTCCGTA‑TGGTGCCCGGTAACATAAACCAATAGTATGTACGCACCGCCCCTGGCACGCTGGCACCCCTTTC‑TCCCCACTCGCCTACCCCATGTACCCATTGTCCACCGCCCCTGGCACCCTACAACGGCacacccccaaaggcggatttaggt                                                                >  1:550582/1‑216 (MQ=255)
                                                                                                                                                                                     ccctttCGCCGGCAGGTCCGTGAACGACTCCCCCAGCCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTC‑TGCCTACTCGTCTACCGAATGGACCTATGGTTCACCGCGACTGGAACGCTACAACGGCATCCCGTCAATGGAGATTTTAGGTGAAgcgg                                                         <  1:188434/235‑1 (MQ=255)
                                                                                                                                                                                       ccTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTC‑TGCCTACTCGTCTACCGAATGGACCTATGGTTCACCGCGACTGGAACGCTACAACGGCAt                                                                                      <  2:933342/208‑1 (MQ=255)
                                                                                                                                                                                              cagccgCTACGTGAACCGCTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTC‑TGCCTACTCGTCTACCGAATGGACCTATGGTTCACCGCGACTGGAACGCTACAACGGCATCCCGTCAATGGAGATTTTAGGTGAAGCGGCGGCCggg                                                 <  2:75065/238‑1 (MQ=255)
                                                                                                                                                                                                  agcTACGTTACAAACTTCCTCAACCAGGGGC‑GGGTGAAAAAATTGTATGGCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTC‑TGCCTACTCGTCTACCGAATGGACCTATGGTTCACCGCGACTGGAACGCTACAACGGCATCCCGTCAATGGAGATTTTAGGTGAAGCGGCGGCCGGGaa                                               <  2:757366/236‑1 (MQ=255)
                                                                                                                                                                                                           aaCGTCTTCCCCATCCGGGGGC‑GGGTGAAAAAAGGGTATGTCCAGGCT‑TGCACG‑CCGTTCCGTA‑TGTTGCCTGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTC‑TGCCTACTCGTCTACCGAATGGACCTATGGTTCACCGCGACTGGAACGCTACAACGGCATCCCGTCAATGGAGATTTTAGGTGAAGCGGCGGCCGGGAAAAGTACCGGTg                                    <  2:846263/238‑1 (MQ=255)
                                                                                                                                                                                                            acggattCCTCAACCAGGGGC‑GGGTGAAAAAAGTGGATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTC‑TGCCTACTCGTCTACCGAATGGACCTATGGTTCACCGCGACTGGAACGCTACAACGGCATCCCGTCAATGGAGATTTTAGGTGAAGCGGCGGCCGGGAAAAGTACCGGTGa                                   <  2:550582/233‑1 (MQ=255)
                                                                                                                                                                                                            aCGACTTCCACAACCGGGGGC‑GGGTGAAAAAAGGGTATGCCCAGGCA‑GGCACG‑GCGTTCCGTA‑TGTTGCCGGATAACCTCAACCAATGGTATGTACGCAACGTCTCTGGCACGATGGCACCGCTTTC‑TGCCTACTCGTCTACCGAATGGACCTATGGTTCACCGCGACTGGAACGCTACAACGGCATCCCGTCAATGGAGATTTTAGGTGAAGCGGCGGCCGGGAAAAGTACCGGTGa                                   <  2:668680/238‑1 (MQ=255)
                                                                                                                                                                                                               aCTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGt                                                                                                                                                                                        <  2:460519/87‑1 (MQ=255)
                                                                                                                                                                                                                  tccgtaaCCAGGGGG‑GGGGAAAAAAAGTGTAGGTCCAGGCA‑GGCACG‑GCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGGCTCTGGCACGATGGCCCCGCTTTC‑TGCCTACTCGTCTACCGAATGGACCTATGGTTCACCGCGACTGGAACGCTACAACGGCATCCCGTCAATGGAGATTTTAGGTGAAGCGGCGGCCGGGAAAAGTACCGGTGACGCCATg                            <  2:467625/234‑1 (MQ=255)
                                                                                                                                                                                                                  tCCGCACCCGGGGGG‑GGGTGAAAAAATGGTATG‑CCAGGGAGGGCCCG‑CCGTTCCGGT‑GGTGGCCCGATAAATTCAACCAAGGGTATGGACGCAACGCCCCGGACCCGAGGGCACCGCTTTC‑TGCTTACTCGTCTACCGAATGGACCTATGGTTCACCGCGACTGGAACGCTACAACGGCATCCCGTCAATGGAGATTTTAGGTGAAGCGGCGGCCGGGAAAAGTACCGGTGACGCCATg                            <  1:902912/239‑1 (MQ=255)
                                                                                                                                                                                                                  tCCCCATCCCGGGGC‑GGGTGAAAAAAGGTTTTGGCCGGGAC‑GGCCCG‑CCGTCCCGGA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGTCACGATGGCACCGCTTTC‑TGCCTACTCGTCTACCGAATGGACCTATGGTTCACCGCGACTGGAACGCTACAACGGCATCCCGTCAATGGAGATTTTAGGTGAAGCGGCGGCCGGGAAAAGTACCGGTGACGCCATg                            <  1:32218/239‑1 (MQ=255)
                                                                                                                                                                                                                   ccccccgcAGGGGC‑GGGTGAAAAAAGTGTATTGCCAAGAC‑GGCACGACGGTACTAAA‑TGTGGCGGGA‑GACACCAACTACAGGTAGGTAAGCTACGGCGCTGACACGATGGCCCCGCTTTC‑GGCGTACTAGACGAACCAGTGGTCCTATGGTTCACCGCGACTGGAACGCTACAACGGCAGCCCGTCGATCGAGATTGTAGGTGAAGCGGCGGCCGTGAAAAGTAGCGGTGACGCCATg                            <  1:186637/231‑1 (MQ=255)
                                                                                                                                                                                                                       caCCAGGGTG‑GGGTAAAAAAAGTGTATGGCACGGCA‑GGCCCC‑GCGTTCCGTT‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCCCCGCTTTC‑TGCCTACTCGTCTACCGAATGGACCTATGGTTCACCGCGACTGGAACGCTACAACGGCATCCCGTCAATGGAGATTTTAGGTGAAGCGGCGGCCGGGAAAAGTACCGGTGACGCCATGAAAtt                       <  1:1233751/238‑1 (MQ=255)
                                                                                                                                                                                                                         ccAGGGGC‑GGGGGAAAAAAGAGGAAAACCGGGGA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGGATGGACGCaa                                                                                                                                                                              >  1:460519/1‑87 (MQ=255)
                                                                                                                                                                                                                          cAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGGATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTC‑TGCCTACTCGTCTACCGAATGGACCTATGGTTCACCGCGACTGGAACGCTACAACGGCATCCCGTCAATGGAGATTTTAGGTGAAGCGGCGGCCGGGGAAAGTACCGGGGACGCCCTGGAATTTAt                    >  2:32218/1‑239 (MQ=255)
                                                                                                                                                                                                                             gggC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGAACGATGGCACCGCTTTC‑TGCCTACTCGTCTACCGAATGGa                                                                                                                           >  2:825595/1‑133 (MQ=255)
                                                                                                                                                                                                                              ggC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCCCC‑CCCTTCCATA‑TGTTGCCGGATAACATCAACCCATGGTATGTACGCAACGCCCCTGGCCCGATGGCAACCCTTTC‑TGCCTACTCGGCTACCGAATAGACCCATTGGTCACCCCGCCTGGAACGCTAAAACCGGAACCCGCCACTGGAGAGTTTAGGGGAAGCGGCGGCCCGGGAAAGAATCCGGGACGCCATGAAAATTTTGGcc                >  1:918793/1‑238 (MQ=255)
                                                                                                                                                                                                                              ggC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTC‑TGCCTACTCGTCTACCGAATGGACCTATGGTTCACCGCGACTGGAACGCTACAACGGCATCCCGTCAATGGAGATTTTAGGTGAAGCGGCGGCCGGGAAAAGTACCGGGGGAGCCATGAAATTTATGGcc                >  2:1185566/1‑238 (MQ=255)
                                                                                                                                                                                                                                   ggTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTC‑TGCCTACTCGTCTACCGAATGGACCTATGGTTCACCGCGACTGGAACGCTACAACGGCATCCCGTCAATGGGGATTTTAGGTGAAGCGGCGGCCGGGAAAAGTACCGGTGACGCCATGAAATTTATGGcgaacc            >  2:1125465/1‑234 (MQ=255)
                                                                                                                                                                                                                                              tgtATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTC‑TGCCTACTCGTCTACCGAATGGACCTATGGTTCACCGCGACTGGAACGCTACAACGGCATCCCGTCAATGGAGATTTTAGGTGAAGCGGCGGCCGGGAAAAGAACCGGTGACGCCATGAAATTTATGGCAGACCCGGTCGCTaa  >  2:337296/1‑238 (MQ=255)
                                                                                                                                                                                                                                              tgtATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTC‑TGCCTACTCGTCTACCGAATGGACCTATGGTTCACCGCGACTGGAACGCTACAACGGCATCCAGACAATGGAGATTTTAGGTGAAGCGGCGGCCGGGGAAAGGACCGTGGACGCCATGAAATTTATGGGAGACCTGAGCGCTaa  >  2:916557/1‑238 (MQ=255)
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                 
CGAAAAACTAACCCAGGCGCGAAACGAGCTGTTATCACTGGCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCT‑GCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGC‑GGGTGAAAAAAGTGTATGTCCAGGCA‑GGCACG‑CCGTTCCGTA‑TGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTC‑TGCCTACTCGTCTACCGAATGGACCTATGGTTCACCGCGACTGGAACGCTACAACGGCATCCCGTCAATGGAGATTTTAGGTGAAGCGGCGGCCGGGAAAAGTACCGGTGACGCCATGAAATTTATGGCAGACCTGGTCGCTAA  >  NC_000913/3662482‑3662955

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A