Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F9 I0 R1
|
142 |
103.7 |
2603848 |
81.8% |
2129947 |
227.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,765,450 |
T→G |
19.5% |
V1090G (GTG→GGG) |
rhsA → |
Rhs protein with putative toxin 55 domain, putative polysaccharide synthesis/export protein, putative neighboring cell growth inhibitor |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,765,450 | 0 | T | G | 19.5%
| 85.9
/ 2.5
| 81 | V1090G (GTG→GGG) | rhsA | Rhs protein with putative toxin 55 domain, putative polysaccharide synthesis/export protein, putative neighboring cell growth inhibitor |
| Reads supporting (aligned to +/- strand): ref base T (45/14); new base G (17/3); total (64/17) |
| Fisher's exact test for biased strand distribution p-value = 5.37e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
GGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGAACCCGCATCCAGACGATTTAT‑CAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAAT‑CCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGTGCGCAGA > NC_000913/3765221‑3765687
|
ggCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGAACCCGCATCCAGACGATTTAT‑CAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCCGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGGGTTCcc‑gcc > 2:788067/1‑239 (MQ=37)
gCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGAACCCGCATCCAGACGATTTAT‑CAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCGGCAGTCCGGCGGCGAAGACGGTGGCGGGGGGGGGTTccgcccg > 2:762790/1‑234 (MQ=255)
gCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGAACCCGCATCCAGACGATTTAT‑CAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGGGGCAGTGTGGGGTTCcc‑gccg > 2:1082184/1‑239 (MQ=37)
gCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGAACCCGCATCCAGACGATTTAT‑CAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGAGGCGCTTCCGCAGTCCGGCGGCGAAGACGGTGGCAGGGTGGGGTTCcc‑gccg > 2:564513/1‑239 (MQ=255)
ctggcgtcgcgatgtaacccGTAAGGGAGCGGGCACGGCTGGGCCGCCGTCCGGCTGCCCACAAGACAAACCGCCTGACCCCGCATCCACAGCTTTCAT‑CAGCCGGGGAGCTCAACGCCACTCATCAGATGTGAACCCGCCCCCGGTGGGCTGGCGAAAACGCAGCGCCGCAGCCGGGCGGAGCCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGc < 1:173332/220‑1 (MQ=2)
cGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGAACCCGCATCCAGACGATTTAT‑CAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGGGAAGACGGTGGCAGTGTGGGGGTCCC‑GCCGGGGCTGGGGCGGATGCTCGACCgg > 2:851941/1‑239 (MQ=255)
cGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGAACCCGCATCCAGACGATTTAT‑CAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGGGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCg > 2:293088/1‑238 (MQ=37)
cGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGAACCCGCATCCAGACGATTTAT‑CAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGGGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCg > 2:108617/1‑238 (MQ=37)
cGCAAGTGACCTGGTACGGCTGGGACGGCGAACGGCTGACCACAATACAGAAAGACAGACCCCGCATCCAGACGACTTAT‑CAGCCGGGGAGCTTCACGCAACTCATCAGAGTTCAAACCGCCACCGGTGAGCTGGCGCAAACGCAGCGCCGCAGCCCGGTGCATGCGCTTAAGCAGGCAGGAGAGGAAGCCGGGGGAGGTGGGGGGTTACC‑GCTggggaggcggcagaggacactacgg > 1:143809/1‑216 (MQ=2)
tgcttGGTACGGCGGGGGCGGGCCCCGGCCAACCACATAACAAACCGAAAGAACCGCCTTCCAG‑GGAGTTATCCCGCCGGGGAGCTCACCGCACCTCAACAGATTTGAAACCGCCACCGGTGAGCTGGCGAAACCGCAGCGCCGCAGCTTGGCGGAGGCGCTTCAGCAGGCCGGCGGGGAAGAGGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGa < 1:1225556/233‑1 (MQ=2)
aCCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGAACCCGCATCCAGACGATTTAT‑CAGCCGGGGAGCTTCACGCCACTCATCCGCGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGCGCGCGGGGGGTTCCC‑CCCGGGGCTGGGGCAGCTACCGGACGGGCGGGaagg > 1:298245/1‑237 (MQ=11)
aCCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGAACCCGCATCCAGACGATTTAT‑CAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGGGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGGCCGGGGCAGTGTGGTGTTCCA‑GCCGGTGCTGGGGCAGAAGCCCGACCGGGCGGAAAg > 1:344950/1‑239 (MQ=11)
gTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGAACCCGCATCCAGACGATTTAT‑CAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGGGTGGGGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGGGaa > 2:419901/1‑238 (MQ=255)
ggACGGCGACCGGCTGACCACAATACAGAACGACAGAACCCGCATCCAGACGATTTAT‑CAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGGGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTg > 2:102021/1‑239 (MQ=37)
gACGGCGACCGGCTGACCACAATACAGAACGACAGAACCCGCATCCAGACGATTTAT‑CAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGGGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCCGGCTg > 2:48541/1‑238 (MQ=37)
gggCGACCGGCTGCCCACAATACAGAACGACAGAACCCGAATCCAGACGATTTAT‑CAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGAc < 2:1135421/237‑1 (MQ=37)
cGACCGGCTGACCACAATACAGAACGACAGAACCCGCATCCAGACGATTTAT‑CAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCCGCAGTCCGGCGTCGAAGACCGGGGCAGTGAGGTGTTTCC‑CCCGGTCCTGGAGCGGACGCACCCACGGGTGGGAAGGGAAAGCCCGCCGGCCCggg > 1:475928/1‑239 (MQ=11)
aGAACGACAGAACCCGCATCCAGACGATTTAT‑CAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGCCCGGCTGGAAAGTGAAATCCTGGCTGCCCGGGGGA‑GGGAGGAAAGCcgccgc > 2:829985/1‑239 (MQ=16)
aGAACGACAGAACCCGCATCCAGACGATTTAT‑CAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGCAAGGGAAATCCTGGCTGACCGGGTGA‑GGGAGGAAAgccgccac > 2:545486/1‑237 (MQ=18)
aGAACGACAGAACCCGCATCCAGACGATTTAT‑CAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAAACCTGGCTGACCGGGTGA‑GTGAGGAAAgccgcc > 2:766523/1‑237 (MQ=18)
aGAACGACAGAACCCGCATCCAGACGATTTAT‑CAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGCGGGGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGGCCGGCTGGGAAGTGAAATCCTGGCTGCCCGGGTGA‑GGGAGGAAAGCcgccgc > 2:895938/1‑239 (MQ=255)
aaCGACAGAACCCGCATCCAGACGATTTAT‑CAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGGGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGGGAAATCCTGCCTGACCGGGGGC‑AGGGGGAAAgccgcccccg > 2:561975/1‑235 (MQ=11)
aCGACAGAACCCGCATCCAGACGATTTAT‑CAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGGGCTGGTGCAGATGCTCGACCGGCTGGAAAGGGAAATCCTGGCTGACCGGGTGG‑GTGGGGAAAGCCGCTgctgg > 2:6876/1‑239 (MQ=255)
gACAGAACCCGCATCCAGACGATTTAT‑CAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCgctg > 2:186757/1‑236 (MQ=33)
cAGAACCCGCATCCAGACGATTTAT‑CAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGGGAAATCCTGGCTGACCGGGTGG‑GTGAGGAAAGCCGCCgctggcgg > 2:452565/1‑236 (MQ=18)
cAGAACCCGCATCCAGACGATTTAT‑CAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGGGAAATCCGGGCTGACCGGGGGA‑GTGGGGAAAACCGCCgctggcgg > 2:139478/1‑236 (MQ=255)
gAACCCGCATCCAGACGATTTAT‑CAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGTGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAACCAGTGGCCGTGTGGTGTTCCC‑GCCGGGGCGGGGGCAGAGGCTCGACCGGCCGGGAGGGGAAATCCCGGCTGACCGGGCGA‑GTGCGGAAAAACGCCgccggtgggg > 1:559169/1‑233 (MQ=11)
aaCCCGCATCAAGACGATTTAT‑CAGCCGGGGAGCTTCACGCCAATCATCAGAGGTGAAACCGCCCCCGCTAAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGTTCCTCTTCAGCAGTCCGCGCGCGAAGAAGCTTCCCGTGTGGAGTTCCC‑GCCGGTCTGGGGGCCGATGGCCGACCGGCCGGGAACTTGTATTCGGGCCGCCCGGGTGAGGTGGGCAAAgccagctcggccagcga > 1:1100484/1‑225 (MQ=2)
cccGCATCCAGACGATTTAT‑CAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGGGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCg > 2:416602/1‑239 (MQ=18)
cccGCATCCAGACGATTTAT‑CAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGGGTGGTGTTCCC‑GCCGGCGCTGGTGCAGATGCTCGACCGCCTGGAAAGTGAAATCCTGGCTGACCGGGGGG‑GGGAGGAAAGCCGCCGCTGGCTGGCCTCg > 2:188636/1‑239 (MQ=255)
cccaaccAGCCGATTTCT‑CGGCGGGGGGTCTTCACGCCACCAATCAGAGTTAAAACCGCCACCGGGGAGCTGGCAAAACCGCAGCGCCGCAGCCTGGCGGATGCGCTCCAGCAGTCCGGGGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTg < 2:260035/234‑1 (MQ=11)
cGCATCCAGACGATTTAT‑CAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCggg > 2:1081265/1‑237 (MQ=18)
aTCCAGACGATTTAT‑CAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGCCGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGGGCAGATGCCCGACCGGCTGGGAAGGGACATCCGGGCTGCCGGGGGGG‑GGGGGGCAAcccgcccgcggcgggcccgagaggc > 1:2115/1‑220 (MQ=11)
aTCCAGACGATTTAT‑CAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGGGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCg > 2:1107096/1‑238 (MQ=18)
tttAT‑CAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCCAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCCCGACCGGCTGGGAAGGGAAATCCTGGCTGACCGGGTGG‑GTGGGGAAAGCCGCCCCTGGGCGGCCACGTGCGGCCTGCCC‑gcg > 1:1282925/1‑237 (MQ=11)
ccGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCGTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTGCCC‑GCCGGTGCGGGTGCAGATGCTCGACCGGCTGGAAAGCGGAATCCAGGCTGCCCGGGGGG‑GAGAGGGAAGGCGCCGGTGGCGGGAACTGGGCGGCCCAACC‑GGGGGGCAgcg > 1:1226078/1‑237 (MQ=11)
cGGGGAGCTTCACGCCACCTAACAGAGTTGAACCCGCCACAGGTGAGCTGGCAAAAACGGCGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGAGGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGAGCAGATg < 2:1224147/239‑1 (MQ=11)
ggggAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGGGTGGCGTTCCC‑GCCGGTGCTGCTGCAGATGCCCGACCGGCTGGACAGGAGAATCCTGGCTGACCGGCTGA‑GGGAGGAAACCCGCCGCCGGCTGGCACCCGGGGGCCTGGCC‑GTGGGGccggggg > 1:658052/1‑233 (MQ=11)
gggAGCTCCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGGGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGGGCAGATG‑Ca > 2:107441/1‑239 (MQ=25)
tCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGGGTTCCC‑GCCGGTGCTGGGGCAGATGCTCGACCGGCTGGAAAGGTAAATCCTGCTTGACCGGGGGG‑GGGAGGGAGGCCGCCGCCGGCTGGACACGTCGGGCCCGACC‑GGGGAgagaagtcaaaaacaa > 1:113209/1‑224 (MQ=11)
cACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGAGCAGATG‑CAAAACCaaa > 2:950770/1‑237 (MQ=25)
cACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGAGCAGATG‑CAAAAccccgtctct > 2:1216081/1‑231 (MQ=25)
cTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑CCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGCAAACCTGCCTGACCGGGGGA‑GTGGGGCAACCCGCCCGCGGCGGGCCTCCTGGCGCCTCACC‑GTGGAGAAGGAG‑CAAAACCAGCTGGAccc > 1:64945/1‑239 (MQ=11)
cTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGGGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGGGG‑GGGCGGGAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGGTGGAG‑AGATG‑GCAAAcaaaaagggacg > 1:823408/1‑228 (MQ=11)
acatcaGAGTTGACCCCGCCACCGGTGAGCTGGCGAAACCGCAGCGCCGGAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTCCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGAGCAGATG‑CAAAACCAGATGGACCCg < 2:298245/238‑1 (MQ=255)
gTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGC‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GCGGAGCAGATG‑CAAAACCAGATGGACCCGgtggcca > 2:304613/1‑234 (MQ=18)
ttGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTacca > 2:559578/1‑236 (MQ=18)
ttGAAACCGCCACCGGTCAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGCGGCAGTGTGGGGTTCCC‑GCCGGCGCTGGGGCAGATGCTCGACCGGATGGAAAGTGCAATCCTGCCTGACAGGGTGA‑GTGTGGAAACCCGCCGCTGGCTGGCGTCCGGCGCCCGGACC‑GCGG‑GCCGCTGCCAGAACCAGATGAAcaccggggacgc > 1:994519/1‑227 (MQ=11)
tGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGAGCAGATG‑CAAAACCAGATGGACCCGGGGTacagc > 2:1266102/1‑236 (MQ=18)
tGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCAGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGCGCAGATG‑CAAAACCAGATGAACCCGGGGTACACg > 2:899968/1‑238 (MQ=16)
aaaCCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGAGCAGATG‑CAAAACCAGATGGACCCGGGGAACACGCCg > 2:493613/1‑239 (MQ=17)
aCCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTAAATGCCCgc > 2:969632/1‑239 (MQ=17)
aCCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGGGTTCCC‑GCCGGGGCTGGTGCAGAGGCACCACCGGCTGGAAAGGGAAATCCTGGCTGACCGGGTGG‑GGGGGGAAGGCCGCCGCTGGCCGCGACCATGCCGCCTGCCC‑CGGGGGGAGGTG‑CCAAACCAGCTGAGCCCggggaccagcccgcg > 1:857481/1‑226 (MQ=11)
gCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACGCCGGcgcg > 2:816212/1‑239 (MQ=31)
cACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GGGGAGCAGATG‑CAAAACCAAATGGACCCGGTGTACACGCCGGCGCGaa > 2:151227/1‑239 (MQ=14)
gAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGGGCGGCCTGACC‑GTGGAGCAGATG‑CAAAACCAGATGGACCCGGGGTACACGCCGGCGCGAAAAAT‑cc > 2:1008371/1‑238 (MQ=14)
gCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGAGCCGATG‑CCAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAAT‑CCACCTGt > 2:376913/1‑238 (MQ=14)
gAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGGGCAGATG‑CAAAACCAGATGGACCCGGGTTACACGCCGGCGCGAAAAAT‑CCACCTGTAc > 2:199897/1‑238 (MQ=14)
aGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGCCC‑GTGGAGCAGATG‑CAAAACCAGATGGACCCGGGGTACACGCCGG‑GCGGAAAATACCACCGGAACCACTCCGa > 2:898566/1‑238 (MQ=11)
aGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAACCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAAT‑CCACCGGTACCACTGCGa > 2:1008297/1‑238 (MQ=14)
gcgcCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGGGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGGGGCCTGACC‑GTGGGGCAGATG‑CAAAACCAACAGGACCCTGCGTACACGCCGGCGGGAAAAAT‑CCAccctgacaccgccgacc > 2:602682/1‑224 (MQ=11)
cAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACAAGCCGGCGCGAAAAAT‑CCACCCGTACCACTGCGACAATcgc > 2:311992/1‑238 (MQ=14)
tccgccaggctGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGGACACGCCGGCGCGAAAAAT‑CCCCCTGAACCCATGCGACCATCGCgg > 2:567714/11‑238 (MQ=11)
gcgcTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGAGCAGATG‑CAAAAc > 2:323073/1‑165 (MQ=31)
gcgcTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAAT‑CCACCTGTACCACTGCGACCATCCCGGCCTGCCGCTgg > 2:422004/1‑238 (MQ=14)
gaggggccggggggagAAGGCGGTGGCAGTGGGGTGTTCCC‑GCCGGTGCTGGTGCGGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAAT‑CCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTAt < 2:1028053/224‑1 (MQ=11)
gctgtcggggggcagagggggTGGCGGTGTGTGTTTCCC‑GCCGGTGCTGGTGCAGATGCCGGACCGGCTGGAAAGGTAAATCCTGGCTGACCGGGTGA‑GGGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAAT‑CCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCa < 2:5438/220‑1 (MQ=11)
tccggggggggAAGGCGGTGGAGGTGGGGTGTTCCC‑GCCGGTGCTGGGGCAGATGCGCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAAT‑CCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGc < 2:475928/228‑1 (MQ=11)
gcgcgggggCGAAGCGGGGGGCCGTGTGGTGTCCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAACCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAAT‑CCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGc < 2:2115/235‑1 (MQ=11)
tCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGC‑GTGAGGAAAGCCGCCGCTGGCTGGCCTCCTGCGGCCTGACC‑GCGGAGCAGATG‑CAAAACCAGAAGGACCCGGTTGACACGCCGCCGCGACAAAA‑CCCCCCGTTACAACGCGACCATCGCGGCCCGACGccgcggctcaccaccac > 1:1234961/1‑223 (MQ=11)
gggggggaaggcggggggtgggtggtgTCCCC‑GCCGGTGCTGGGGCAGAGGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACGGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAAT‑CCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCaagga < 2:801444/218‑1 (MQ=11)
tggggggtgggggggggtgtggGGTTTTCCCGGCCGGTGGTGGGGCGGAGGCCCGACCGTGGGGAAAGTGAAACCCGGGCTGACCGGAGGA‑GGGAGGAAAGCCGCCGCTGGCTGGCATCGTGTGGCCTGACC‑GTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAAT‑CCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCaagga < 1:452565/221‑1 (MQ=11)
ggggggaagggggTGGGAGTGGGGTGCTCCC‑GCCGGGGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GGGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAAT‑CCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCaagga < 2:886730/227‑1 (MQ=11)
gcggcgAAGGCGGGGGAAGTGGGTGGTTCCC‑GCCGGGGCTGGGGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAAT‑CCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCaagga < 2:795603/238‑1 (MQ=11)
gAAGCCGGTGGCTGTGTGGTTTCCCC‑GCCGGTGCTGGTGCAAATGCCCGACCGGCTGGAAAGTGAAATCCTGGTTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAAT‑CCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGa < 2:823408/238‑1 (MQ=255)
aaggagggTGGGATTGTGGTTTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAAT‑CCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGa < 2:1079904/232‑1 (MQ=255)
aaagcgggggggtggttggttTCCCC‑GCCGGTGCTGGGGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAAT‑CCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGa < 2:658052/222‑1 (MQ=11)
aaagcgggggggaggggggttTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCGGGAAAGTGAAATCCTGGCTGCCCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAAT‑CCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGa < 2:64945/221‑1 (MQ=11)
aaaGGCGGGGGCGGTGTGGGTGCCCC‑GCCGGGGCTGGGGCAGATGCCAGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAAT‑CCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGa < 2:1282925/237‑1 (MQ=11)
aaGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGGGCGGCCTGACC‑GTGGAGCAGATG‑CCAAACCCGATCGACCCGGTGTTCCCGCCGGCGCGAAAAAT‑CCACCAGTACCCCCGCGACCATCGCGGCCCGCCGCTGGCCCTTATCAACCAGGAAGGGaca > 1:1039160/1‑239 (MQ=11)
ggTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAAT‑CCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGgcaacaaa > 2:861198/1‑237 (MQ=17)
tGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAAT‑CCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGCAAACAGaag > 2:15393/1‑238 (MQ=21)
ggtggGGTTTCCCC‑GCCGGTGCTGGTGAGGATGCCCGACCGGCGGGAAAGGGAAATCCTGGCTGACCGGGTGA‑GTGAGAAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAAT‑CCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGt < 2:559169/237‑1 (MQ=11)
tgtgCTATTCCC‑GCCGGTGCTGGCGAAGATGCTCGACCGGCTGGCAAGTGAAATCCTGGCTAACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCCGGCATCGTGCGGCCTGACC‑GTGGAGCAAATG‑CACAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAACA‑CCACCCGCACCACTGCAACCCGCGCGCACTGCCCCCGGCCCCTCTCAACAAAAAAAAGACAACaaaaacgggag > 1:562087/1‑232 (MQ=11)
tggtgTCCCC‑GCGGGTGCTGGGGCACGTGCTCGCCCGGCTGGAAAGGGAAATCCGGGCTGACCGGGGGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAAT‑CCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGTgcgc < 2:664098/238‑1 (MQ=11)
gtgtTCCC‑GCCGGTGATGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GGGAGGAAAGCCGCCGCGGGCTGGAATCGTGCGGCCTGACC‑GGGGAGCAGATG‑CAAAACAAGATGGACCCGGCGGTCAAGACGGCGCGCAAAAT‑CCACCGCAACCACCGCGACCACCGGGGCCTGCCGCTGGGCGTTATCTGCAAGAAAAGGAAAACAGAACGgcgcacgca > 1:174320/1‑234 (MQ=11)
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GGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGAACCCGCATCCAGACGATTTAT‑CAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCC‑GCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGA‑GTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACC‑GTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAAT‑CCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGTGCGCAGA > NC_000913/3765221‑3765687
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
