Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A2 F9 I0 R1 142 103.7 2603848 81.8% 2129947 227.3

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,297,511 A→C 10.3% G619G (GGT→GGG)  fdhF ← formate dehydrogenase‑H, selenopolypeptide subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,297,5110AC10.3% 286.6 / 3.8 114G619G (GGT→GGG) fdhFformate dehydrogenase‑H, selenopolypeptide subunit
Reads supporting (aligned to +/- strand):  ref base A (62/32);  new base C (2/14);  total (64/50)
Fisher's exact test for biased strand distribution p-value = 7.41e-05
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 114 total aligned reads displayed.

CGTACTGCTCGGCGGCGCGCTGATCGGCGATCGGCTCGACGCGAACGGCGCAGTATTTGTACTCCGGCGTTTTCGTAATCGGGCTTAAGTTTTCGGTAACCAGCTCGTTACAGGCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTCGATTGGCGCTACCCAGTCGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTTTAAACAGATAAG  >  NC_000913/4297276‑4297746
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                              
cGTACTGCTCGGCGGCGCGCTGATCGGCGATCGGCTCGACGCGAACGGCGCAGTATTTGTACTCCGGCGTTTTCGTAATCGGGCTTAAGTTTTCGGTAACCAGCTCGTTACAGGCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGTTAATTTTGCCTTTCCTCGAGCGCACCCAAACC‑AATGCCCGATCTTCAATAccc                                                                                                                                                                                                                                             >  2:135106/1‑239 (MQ=255)
       cTCGGCGGCGCGCTGATCGGCGATCGGCTCGACGCGAACGGCGCAGTATTTGTACTCCGGCGTTTTCGTAATCGGGCTTAAGTTTTCGGTAACCAGCTCGTTCCAGGCACCAATCCACCACTGGTAGGTCATGGAAATTGCCACTTTGATCGGACCATA‑CCTGAACTGCGGC‑CGGGTGATCATTTTGCCTTTACGCGAGTGCACCCAAACC‑CATGCCTTCTCTTCTATACCCACACGta                                                                                                                                                                                                                                      >  1:359087/1‑238 (MQ=255)
       cTCGGCGGCGCGCTGATCGGCGATCGGCTCGACGCGAACGGCGCAGTATTTGTACTCCGGCGTTTTCGTAATCGGGCTTAAGTTTTCGGTAACCAGCTCGTTACAGGCACCAATCCACCACTGGTATGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACTCGAGGGCACCCAAACC‑AATGCATCATATTCAATACCCAGACGtt                                                                                                                                                                                                                                      >  2:919563/1‑239 (MQ=255)
       cTCGGCGGCGCGCTGATCGGCGATCGGCTCGACGCGAACGGCGCAGTATTTGTACTCCGGCGTTTTCGTAATCGGGCTTAAGTTTTCGGTAACCAGCTCGTTACAGGCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGTTAATTTTGCCTTTACTCGAGTGCACCCAAACC‑AATGCCTCATTTTCAATACCCAGACGtt                                                                                                                                                                                                                                      >  2:1013838/1‑239 (MQ=255)
       cTCGGCGGCGCGCTGATCGGCGATCGGCTCGACGCGAACGGCGCAGTATTTGTACTCCGGCGTTTTCGTAATCGGGCTTAAGTTTTCGGTAACCAGCTCGTTACAGGCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGtt                                                                                                                                                                                                                                      >  2:477168/1‑239 (MQ=255)
       cTCGGCGGCGCGCTGATCGGCGATCGGCTCGACGCGAACGGCGCAGTATTTGTACTCCGGCGTTTTCGTAATCGGGCTTAAGTTTTCGGTAACCAGCTCGTTACAGGCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGtt                                                                                                                                                                                                                                      >  2:627986/1‑239 (MQ=255)
       cTCGGCGGCGCGCTGATCGGCGATCGGCTCGACGCGAACGGCGCAGTATTTGTACTCCGGCGTTTTCGTAATCGGGCTTAAGTTTTCGGTAACCAGCTCGTTACAGGCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTCCACCCAAACC‑AATGCCCCATCTTCAATACCCCAACGtt                                                                                                                                                                                                                                      >  2:72106/1‑239 (MQ=255)
       cTCGGCGGCGCGCTGATCGGCGATCGGCTCGACGCGAACGGCGCAGTATTTGTACTCCGGCGTTTTCGTAATCGGGCTTAAGTTTTCGGTAACCAGCTCGTTACAGGCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACCCGAGGGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGtt                                                                                                                                                                                                                                      >  2:1137860/1‑239 (MQ=255)
          gtcggcgCGCTGATCGGCGATCGGCTCGAAGCGAACCGCGCAGTATTTGTACTCCGGCGTTTTCGTAATCGGGCTTAAGTTTTCGGTACACCGCTCCTTACAGGCACCCATCCACCACTGGTAGGGCCTGTAAATCTCCCCTTTGTTCGGACGAACAGCT‑ACCTGAGCA‑CGGGAGATAATTTTGCCTTTACGCGAGGGCGCCCAAACC‑AAAACCTCATATTTAAAAccccaactctttg                                                                                                                                                                                                                                   >  1:730451/3‑229 (MQ=255)
           ggcgccgccTGAGCGGCGCTCGGCAGCAGGCGAACGGCGCAGTAGTTGCACTCCGGCTTTGTCGGAATCGTGGTTGAGTTTTCGGTACCCAGCTCGTTACAGGCCCCATTCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGAGGATC‑GATGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCTCCCAAGCC‑AATGCCTAATCTTCAATACCCAGACGTTTGGc                                                                                                                                                                                                                                  <  1:1013838/231‑1 (MQ=255)
            cggcgCGCTGACCGGCGATCGGCTCGACGCGAACGGCGGAGTATTTGTACTCCGGCGTTTTCGTAATCGGGCTTAAGTTTTCGGTAACCAGCTCGTTACAGGCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGc                                                                                                                                                                                                                                  <  2:588852/238‑1 (MQ=255)
                gtgcttttctgcgattgccTCTCCGCGAACGGCGCATTTTTTGTACTCCGCCGTTTTCGTAATCGGGCTTAAGTTTTCGGTAACCAGCTCGTTTCAGGCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCtt                                                                                                                                                                                                                             <  1:325492/229‑1 (MQ=255)
                gcgcTTGTCGGGTATCGGCTCGGCGGTAAGGGCGCCGTTTTTGTACCCCGGCGTTTTGGTAATCGGGCTTAAGGTTTCGGTAACCAGCTCGTTACAGGCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCtt                                                                                                                                                                                                                             <  1:797302/239‑1 (MQ=255)
                gcgcTGTGCGGCGATCGGGTTGACGCGAAGGGCGTAGTTTTTTTACTCCGGCGTTTTCGTAATCGGGGTTAAGTTTTCGGTAACCAGCTCGTTACAGGCACCAATCCCCCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCtt                                                                                                                                                                                                                             <  1:169962/239‑1 (MQ=255)
                 gtttgagtggggcgtggcTCGGAGGGAACGGCGGAGTTGTTTTACGCAGGCGTTTTCCTAATCGGGCTTAAGTTTTCGGTAACCAGCTCGTGACAGGCACCAATCCACCACTGGGAGGTCATGTAAATCGCCCCTTTGTGCGGGCGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGTCGTTTGGCGTCtt                                                                                                                                                                                                                             <  1:1113173/223‑1 (MQ=255)
                 gcctgttgcgggatgggaTCGGCGCGAAGGGGGCAGTTGTTGTAGCCCGGCGGTTTGGTAAGCGGGGTTAAGTTTTCGGGAAACAGCCCGTTACAGGCACCAATCCACCCAGGGTAGGTCATGTAAATCGCCCCTTGGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACA‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCtt                                                                                                                                                                                                                             <  1:209968/227‑1 (MQ=255)
                 cggtgaccggtagttggcccgcagcgAACGGGTCAGTAGTTGTACTCCGGCGTTGTCGGAATCGGGCTTAAGTTTTCGGTAACCAGCTCGTTACAGGCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTGTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCtt                                                                                                                                                                                                                             <  2:464515/215‑1 (MQ=255)
                 cgcTGATCGGCCATCGGGTTGACGCGAACGGGGAAGTATTTGTACTCCGGCGTTTTAGTAATCGGGCTTAAGTTTTCGGTAACCAGCTCGTTACAGGCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCtt                                                                                                                                                                                                                             <  2:452899/238‑1 (MQ=255)
                  gacagtcggccatcgggTCGAAGCGAACGGCGCAGTATTTGTAATCCGGCTTTTGCGTAATTGGGCTTAAGTTTTGGGTAACCAGCTAGGTACAGGCCGCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCtt                                                                                                                                                                                                                             <  2:626723/232‑1 (MQ=255)
                    tGATCGGCGATCGGCTCGACGCGAACGGCGCAGTATTTGTACTCCGGCGTTTTCGTAATCGGGCTTAAGTTTTCGGTAACCAGCTCGTTACAGGCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑t                                                                                                                                                                                                                        <  2:724052/239‑1 (MQ=255)
                     gagcggcgatcggcTCGACGCGAACGGCGCAGTATTTGTACTCCGGCGTTTTCGTAATCGGGCTTAAGTTTTCGGTAACCAGCTCGTTACAGGCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑Ta                                                                                                                                                                                                                       <  2:773496/236‑1 (MQ=255)
                                  gtCGACGCGAATGGCGCAGTATTTGTACTCCGGCGTTTTCGTAATCGGGCTTAAGTTTTCGGTAACCAGCTCGTTACAGGCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCg                                                                                                                                                                                                          <  2:480770/237‑1 (MQ=255)
                                  cTCGACGCGAACGGCGCAGTATTTGTCCTCCGGCGTTTTCGTAATCGGGCTTAAGTTTTCGGTAACCAGCTCGTTACAGGCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCg                                                                                                                                                                                                          <  2:809765/238‑1 (MQ=255)
                                      ggcgaagcggcggAGTTTTTCGACGCCTGAGTTTTCGTGACCGGGCTTAAAGTTTCGGTAACGAGTCCGTTACAGGGTGCAATCACCCGCTGGTAGGGCATGTAAATCGCCTCTTTGTTCGGACTGTC‑GCTGACCTGCGTA‑CGGTTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCACAACTCAGACGTTGTGCGTCTTCGG‑TATT‑GATTTGTGCGTAGc                                                                                                                                                                                                      <  1:919563/231‑1 (MQ=255)
                                         ggAACGGCGCAGTATTTGTACCCCGGCGTTTTCGTAATCGGGCTTAAGTTTTCGGTAACCAGCTCGTTACAGGCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑g                                                                                                                                                                                                  <  2:811719/237‑1 (MQ=255)
                                         cgAACGGGTCAGTATGTGGACTCCGGCCTTTTCGTAAGCGGGGTTAAGTTTTCGGTGACCACGTCGTTACAGGCACCAAGCCCGCACTTGTAGGGCAGGTAAATCCCCCCTTTGTTCGGACGATC‑GCTGACCGTCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑g                                                                                                                                                                                                  <  1:971841/238‑1 (MQ=255)
                                                cgcAGTATTTGTACTCCGGCGTTTTCGTAATCGGGCTTAAGTTTTCGGTAACCAGCTCGTTACAGGCACCCATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCC‑CGGGTGATAATTTGTCCTTTACGCGAGTGCACCCAAACC‑ATTGCCTCATCTTCATAAACCTGACTGTAGCCGTCTTCGG‑CATG‑GTTTTGGCCGTAGCCA‑GGTtccacg                                                                                                                                                                                          >  1:494583/1‑235 (MQ=255)
                                                cgcAGTATTTGTACTCCGGCGTTTTCGTAATCGGGCTTAAGTTTTCGGTAACCAGCTCGTTACAGGCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑AATT‑GATTTTTGCGTAGCCA‑GGTtcatca                                                                                                                                                                                          >  2:610260/1‑239 (MQ=255)
                                                      aTTTGTACTCCGGCGATTTCGTAATCGGGCTTAAGTTTTCGGTAACCAGCTCGTTACAGGCCCCAATACACCACTGGTAGGTCATGTTAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGGGCA‑AGGGTGATAATTTTGCCTTTACGCGAGTGCGCCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTTCGGGCTTCGG‑AATT‑GCTTTGTCCGTAACCC‑GGTGCCTcagcacc                                                                                                                                                                                     >  1:249547/1‑235 (MQ=255)
                                                          gTACTCCGGCGTTTTCGTAATCGGGCTTAAGTTTTCGGTAACCAGCTCGTTACAGGCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGcccc                                                                                                                                                                                 >  2:798747/1‑238 (MQ=255)
                                                               ccGGCGTTTTCGTAATCGGGCTTAAGTTTTCGGTAACCAGCTCGTTACAGGCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTATGCGAGTGCACCCACACC‑ACTGCCTCATCTCCATTCCCCATACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGt                                                                                                                                                                           >  2:1136450/1‑239 (MQ=255)
                                                               ccGGCGTTTTCGTAATCGGGCTTAAGTTTTCGGTAACCAGCTCGTTACAGGCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑ACTGCCTCATCTTCAATCCCCAGACGTTTGGCGTCTTCGG‑AATT‑GATTTTTGCGTAGCCA‑GGTTCACAAGCCAGCgccgccggg                                                                                                                                                                           >  1:32802/1‑236 (MQ=255)
                                                               ccGGCGTTTTCGTAATCGGGCTTAAGTTTTCGGTAACCAGCTCGTTACAGGCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCGGACGTTTGGCGTCTTCGG‑TATT‑GATTTTTGCGTAGCCA‑GGTTCATCAGCAACCgccccccg                                                                                                                                                                            >  2:715326/1‑236 (MQ=255)
                                                               ccGGCGTTTTCGTAATCGGGCTTAAGTTTTCGGTAACCAGCTCGTTACAGGCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGCCGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAg                                                                                                                                                                            >  2:1109266/1‑238 (MQ=255)
                                                               ccGGCGTTTTCGTAATCGGGCTTAAGTTTTCGGTAACCAGCTCGTTACAGGCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTTTGCGTAGCCA‑GGTTCATCAGCAAGCGCCGCCAg                                                                                                                                                                            >  2:767485/1‑238 (MQ=255)
                                                               ccGGCGTTTTCGTAATCGGGCTTAAGTTTTCGGTAACCAGCTCGTTACAGGCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGc                                                                                                                                                                                                      >  1:758568/1‑213 (MQ=255)
                                                               ccGGCGTTTTCGTAATCGGGCTTAAGTTTTCGGTAACCAGCTCGTTACAGGCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATTAGCCAGCGCCGCCAg                                                                                                                                                                            >  2:1166253/1‑238 (MQ=255)
                                                               ccGGCGTTTTCGTAATCGGGCTTAAGTTTTCGGTAACCAGCTCGTTACAGGCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGt                                                                                                                                                                           >  2:485403/1‑239 (MQ=255)
                                                               ccGGCGTTTTCGTAATCGGGCTTAAGTTTTCGGTAACCAGCTCGTTACAGGCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGGGATAATTTTGCCTTTACGCGAGTGCACCCAACCC‑AATGCCTCATCTTCAATACCCAGCCGTTTGGGGTCTTGGG‑TATG‑TCTTTTGGCGGCGCCA‑GGTAAATAAGCCAGCcccccccg                                                                                                                                                                            >  1:900775/1‑236 (MQ=255)
                                                                     ttttCGTTATCTGGTTTATTTTTGCGGTACACACCCCGTGACGGGCCCCGACCCTCCTCTGGTAGGTCTTGTAAATCGCCCTTTTGTTCGGGGCTTC‑CCCGACCTGCGAC‑GGGGTGATAATTTTCCTTTTGCGCGAGTGCGCCCAAACC‑ATTGCTTCATCTTCAATCCCAACACGTTTGGCGGCTCCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGca                                                                                                                                                                     <  1:72106/239‑1 (MQ=255)
                                                                      tttCGTAATCGGGCTTAAGTTTTCGGTAACCAGCTCGTTACAGGCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGca                                                                                                                                                                     <  2:622407/238‑1 (MQ=255)
                                                                      tttCGAAATCGGTCTTAAGTTTTCGGTAACCAGCTCGTTAGAGGCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGAGC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGca                                                                                                                                                                     <  2:514464/238‑1 (MQ=255)
                                                                      ttctgTAATCGGGCTTAAGTTTTGGTGAACCAGCTCGTTACAGGCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTTGTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGca                                                                                                                                                                     <  2:730451/234‑1 (MQ=255)
                                                                       ttCGTAATCGGGCTTAAGTTTTCGGTAACCAGCTCGTTACAGGCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACCCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCGGcccc                                                                                                                                                                   >  2:1260517/1‑236 (MQ=255)
                                                                                 ggCTTAAGTTTTCGGTAACCAGCTCGTTACAGGCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCCAACC‑AATGCCTCATCTTCAATACCCAGACGGTTGGGCTCTCCGG‑TATT‑TATTTTGGCATAGCCA‑GGTTTACCAGCCAGCCCCCCCacggcgccccccgtacccgtc                                                                                                                                                         >  1:1074258/1‑219 (MQ=255)
                                                                                          tttCGGTAACCAGCTCGTTACAGGCCCCAATCCACCACTGGTAGGTCATGTAAATCGCCCTTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTTATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATCCCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAAc                                                                                                                                                  <  2:95226/237‑1 (MQ=255)
                                                                                           ttCGGTAACCAGCTCGTTACAGGCCCCAATCCCACACTGGTAGGTTATGTAAATCGCCCCTTTGTTCGGCCGATC‑GCTGACCTGCGCA‑CGGGTGAAAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATCCCCAGCCGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGc                                                                                                                                               <  2:399855/239‑1 (MQ=255)
                                                                                           ttCGGTAACCAGCTCGTTACAGGACCCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGAGC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATCCCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGc                                                                                                                                               <  2:863403/239‑1 (MQ=255)
                                                                                           gtgggTAACCAGGTGGGTAGTGGCACCAATCCCCCTCGTGGAGGGCATGTAAAGCGCCCTTTTGTTCGGGCGAGC‑GCGGATGCGCGCA‑GGGGTGAAAATTTTGCCTTTACGCCGGTGCCCCCAACCC‑AATGCCCGATCTTCAAAACCCAGACGTTTGGGGGCTGCGG‑TATG‑GATTTGTGGGGGGCCA‑GGTTAAGCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGc                                                                                                                                               <  1:580369/236‑1 (MQ=255)
                                                                                                          gTTACAGGCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAAAGTAGTGACCa                                                                                                                                 >  2:1274017/1‑238 (MQ=255)
                                                                                                                 gCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAAAGTAGTGACCAACTTCAc                                                                                                                          >  2:122712/1‑238 (MQ=255)
                                                                                                                   cccAATCCCCCACGGGTGTGTCGTGTAAATCTCGCCTTTGTGCAGACGCTG‑GTCGCACTGTCCC‑CGGTTGAAAATTTTGCTTTTACGCGATTGC‑CACAAACCTAATGCCTGTGCTTAAACACCCTGACTTTGGGCGTCTTCGG‑TATT‑GATGTGCGCGTGGCCA‑GTTTCATCAGCCGGGGCGGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGc                                                                                                                        <  1:999477/237‑1 (MQ=255)
                                                                                                                           accacTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑AATT‑GATTTTTGCGTAGCCA‑GGTTCACCAGCCAGCGCCGCCAGTGCCCCCCAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCACATTCACGCACCggtaaa                                                                                                               >  1:1009984/1‑234 (MQ=255)
                                                                                                                            ccccgggttggttATTTAAATCGCCCCTTTTTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTAATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATGCCCAGACGTTTGGCGTTTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACa                                                                                                              <  2:847700/234‑1 (MQ=255)
                                                                                                                              cagggtagtgaaTGTAAATCGCCCTTTGGTTCGGACGACC‑GCTGACCTGCGCC‑CGGGTGATAATTTTGCC‑TTACGGGAGTGCCCCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGGGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTa                                                                                                           <  2:679689/228‑1 (MQ=255)
                                                                                                                               cTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGt                                                                                                            >  2:1238416/1‑238 (MQ=255)
                                                                                                                               cTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGGGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCCGTCCCGCCCAGTTACCCGTCCTCGAACGGCAAACGTAGTGccccaattaccgccccgcttcaagt                                                                                                            >  1:997000/1‑216 (MQ=255)
                                                                                                                                 ggagggTCATTTAAACCCCCCCTTTTTTCGGACGAAC‑GCTTACCTGCGCA‑CGGATGATAATTTCGCCTTTACGGGAGTGCACCAAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGGGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTAcc                                                                                                         <  2:1249301/235‑1 (MQ=255)
                                                                                                                                  gTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCCACGGAAGTGACCAACTTCACGCACCGTTGCCAGTAcc                                                                                                         >  2:1205640/1‑238 (MQ=255)
                                                                                                                                  gTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGGTCATCAACCAGCCCCGCCAGTCCCGCACAGTTACCGGTCTTCGAACGGCAAGAGTAGTGACCACCTTCACGCACCGTTGCAAGAACCa                                                                                                        >  2:1207619/1‑239 (MQ=255)
                                                                                                                                      gTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGAAGTGACCAACTTCACGCCCCGTGGCCAGTACAACCgg                                                                                                    >  2:713169/1‑239 (MQ=255)
                                                                                                                                       tCATGTCAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGGGTGCACCCAAACC‑AACGCCTGATCTTCAATAACCAGCCGCTTGCCGTCTTCGG‑TATT‑GATTTGGGCGTGGCCA‑GGTTTATCAGCCAGCGCCCCCCGTGCCGCAACGTTACCGGGCATCGAACGACCAGAGTAGTGAACAACTTCACGCAACGTTCACAGAAcacaagcg                                                                                                   >  1:238005/1‑232 (MQ=255)
                                                                                                                                          tGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCATCGCCGCCAGTGCCGCACAGTTAACGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCCCCCTTGACAGTCCCAACgggaa                                                                                                 >  1:100901/1‑236 (MQ=255)
                                                                                                                                          tGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACCGTACCATCGGGTa                                                                                                 >  2:266207/1‑238 (MQ=255)
                                                                                                                                          tGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTa                                                                                                 >  2:1091375/1‑238 (MQ=255)
                                                                                                                                          tGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGCCAAGAGAAGTGACCAACTTCACGCACCGTTGACAGTACCATCgggaa                                                                                                 >  2:133720/1‑236 (MQ=255)
                                                                                                                                          tGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTCCCGCCCAGTTACCGGCCATCGAACGGCAAGAGGAGGGACCACCTTAACGCACCGTTACCAGTACCacccggac                                                                                                 >  1:332094/1‑231 (MQ=255)
                                                                                                                                                              gggagATC‑GGTGACCTG‑GCACCGGGTGATAATTTTGCCTTTACGCGAGTGCACCAAAACC‑AATGCCTCATCTTCAATCCCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTCGAt                                                                            <  2:32802/235‑1 (MQ=255)
                                                                                                                                                                gtgcctgccgcgaccttggactgggTGAGAATTTCCCCTTTCCGCTTGGGCCCCGAATAC‑AATGCCTCATCATCCATGCACAGCTGTCTGGCTTC‑GGGG‑TATTGGACTTGTG‑GTGCACATGGTTCGTCATCCAGCGCGGCCAGTGCCGCAAAGTTACCGGTCATCGAACGGCAAGAGTAGTGGGCAACCTCACGCCCCGGTGACAGTACCATCGGTTACTCGTCGGTGAGTTTGTCGAt                                                                            <  1:183737/217‑1 (MQ=255)
                                                                                                                                                                aCGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGa                                                                                                                >  2:1002936/1‑201 (MQ=255)
                                                                                                                                                                               gcgcA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGCCAGTACCATCGGGTACTCGTCGGTGAGTTTGTCGATTGGCGCTAcc                                                                  >  2:950265/1‑233 (MQ=255)
                                                                                                                                                                                cgcA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCCCCGTTGACAGTACCATCGGGAACTCGTCGGGGAGTTTGTCGATTGGCGCCACCCAGTccc                                                           >  2:1229198/1‑237 (MQ=255)
                                                                                                                                                                                cgcA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTCGATTGGCGCTACCCAGTCGc                                                           >  2:820540/1‑239 (MQ=255)
                                                                                                                                                                                      ggttGATAATTGTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATGTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGAAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTCGATTGGCGCTACCCAGTCGc                                                           <  2:766752/231‑1 (MQ=255)
                                                                                                                                                                                           attaTTTTTCCTTTACGGGTGTGCCCACAACAC‑ACTGGCTGATGTTAAATCACCAGTGGTGTGGCGCTTTGGG‑TTTG‑AATTTGGGCTGAGCCA‑GTTTCACCACCCGGGGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTCGATTGGCGCTACCCAGTCGCAGGTgaagaa                                                 <  1:1166253/236‑1 (MQ=255)
                                                                                                                                                                                           aTAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGGGAGTTTGTCGATTGGCGCTACCCAGTCGCAGGTgaaga                                                  >  2:161181/1‑238 (MQ=255)
                                                                                                                                                                                            tAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATTGTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCTTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTCGATTGGCGCTACCCAGTCGCAGGTgaagaa                                                 <  2:12975/238‑1 (MQ=255)
                                                                                                                                                                                                  tGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGCCCAACTTCACGCCCCGTTGACAGTACCATCAGGAACTCGTCGGCGAGTTTTTCGATGGGCGCTACCCATACCCAGGAgaaaaaacgtccc                                          >  1:261549/1‑232 (MQ=255)
                                                                                                                                                                                                  tGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTCGATTGGCGCTACCCAGTTGCAGGCGAAGAACCGCGcc                                          >  2:498412/1‑239 (MQ=255)
                                                                                                                                                                                                  tGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTCGATTGCCGCTACCCAGTCGCAGGTGAAGAAcctgtc                                           >  2:1228423/1‑233 (MQ=255)
                                                                                                                                                                                                  tGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGCGACCAACTTCACGCACCGTTGCCAGTACCATCGGGTACTCGTCGGTGAGTTTGTCGATTGGCGCTACCCAGTCGCAGGGGAAGAACTgcg                                            >  2:207268/1‑237 (MQ=255)
                                                                                                                                                                                                  tGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTAGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCTGACGGCAAGATCAGTCACCAACTTCACGCACCCGTGACAGTACCCTCGGGGACTCGTGGGGGTGCTTGTCGATTGGCGCTAccccggctccggggaaaaacaggtg                                           >  1:766752/1‑216 (MQ=255)
                                                                                                                                                                                                       ttACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTAGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCCCGCCCCGCTGACAGTACCAACGGGTACTCGTCGGTGAGTTGTCCGAATGGCGCCACCCCTTCCCAgggtaaagactggcccaaacc                                     >  1:1151059/1‑220 (MQ=255)
                                                                                                                                                                                                        tACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTCGATTGGCGCTACCCAGTCGCAGGTGAAGAACTGCGCCAGAcct                                    >  2:27173/1‑238 (MQ=255)
                                                                                                                                                                                                          cgcgGGTGCACCCAAACC‑AATGCCCCCTTTCCAAGCCCCGGGCGTGTGGCGTTTGCGG‑TATT‑TTTTTGGGCGTAGCCA‑GGTACAACAGCCCGCTCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTCGATTGGCGCTACCCAGTCGCAGGTGAAGAACTGCGCCAGACCGtt                                  <  1:178033/239‑1 (MQ=255)
                                                                                                                                                                                                            cggtgtcaccatgccc‑AATGCTTCATGTTCACAGTCCAGGTTTTTGGCG‑CTTCGGTTATT‑GTTTGGTGCGCAGCCA‑GGTTCACCGGCTAGCGCCGCCAGTGCCGCACAGTTACCGGTTATCGAACGGCAAGAGTAGTGACCAACTTCCCGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTCGATTGGCGCTACCCAGTCGCAGGTGAAGAACTGCGCCAGACCGTTCg                                <  1:820540/225‑1 (MQ=255)
                                                                                                                                                                                                             gAGTGCCCCCAAACC‑AATGCCTTATCTTCAAATCCCAGACGGTTGGCGTTTTCGG‑TATT‑GATTTGGGCGTAGCCA‑GGTTCATCAGCAAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTCGATTGGCGCTACCCAGTCGCAGGTGAAGAACTGCGCCAGACCGTTCg                                <  2:1074258/238‑1 (MQ=255)
                                                                                                                                                                                                                  cACCCAAACC‑AATGCCTCATTTTCAATCCCCAGGCGTTGGGCGTCTGCGG‑TATT‑GATTGGGGCGTAGCCA‑GGTTCAGCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTCGATTGGCGCTACCCAGTCGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTa                           <  2:538852/238‑1 (MQ=255)
                                                                                                                                                                                                                         ccc‑AATCCCTCTACTTCAATCCCCGGGTGTTGGGCGTCTTCGG‑TTTT‑GATTTGGGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTCGATTGGCGCTACCCAGTCGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACtt                   <  2:674914/238‑1 (MQ=255)
                                                                                                                                                                                                                         aCC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCA‑‑GCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTCGATTGGCGCTACCCAGTCGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACtt                   >  2:234427/1‑237 (MQ=255)
                                                                                                                                                                                                                               tGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGGGACCAACTTCACGCACCGTTGACAGTACCATCGGGCACTCGTCGGTCAGTTTGTCGATTGGCGCTACCCAACGGCAGGTGAAGAACTCGCCCGGACCGTTCGGGGGACCAAACTTCCCtt              >  1:674914/1‑239 (MQ=255)
                                                                                                                                                                                                                                gCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCCTCGGGTACTCGTCGGTGAGTTTGTCGATTGGCGCTACCCATACGCAGGCGCAGAACTGGGCCAGACCGATCggggatacaacactcctttt             >  1:366655/1‑223 (MQ=255)
                                                                                                                                                                                                                                   tCATCTTCATTCACCAGCCGTTGGGCGTCTTCGT‑TTTT‑GATTTGGGCGTACCCA‑GGTTCAAAAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTCGATTGGCGCTACCCAGTCGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTTTaaa          <  2:900775/239‑1 (MQ=255)
                                                                                                                                                                                                                                   tCATCTTCAATCCCCAGACGTTTGGCGTCTGCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTCGATTGGCGCTACCCAGTCGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTTTaaa          <  2:279845/239‑1 (MQ=255)
                                                                                                                                                                                                                                   tCATCTTCAATACCCAGACGTTTGGCGTCTGCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTCGATTGGCGCTACCCAGTCGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTTTaaa          <  2:1009984/239‑1 (MQ=255)
                                                                                                                                                                                                                                    cATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCAA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCCCAGTTACCGGTCATCGAACGGCAAGAGTACTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCTGACAGTTTGTCGAATGGCGCTAACCACTCGCAGGTCAAGACCTGCGCCAACCCTCTCggggcaaaacaactttctttaaaa         >  1:1015697/1‑219 (MQ=255)
                                                                                                                                                                                                                                     aTCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGGTTGTCGATTGGGGCTACCCAGTCGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGGATCAAACTTCCCTTTAAACa        >  2:1247217/1‑239 (MQ=255)
                                                                                                                                                                                                                                      tCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTCGATTGGCGCTACCCAGTCGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTTTaacaag       >  2:911735/1‑235 (MQ=255)
                                                                                                                                                                                                                                          cAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTCGATTGGCGCTACCCAGTCGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAAATTCTCTTTAAACAGATaa   >  2:247966/1‑239 (MQ=255)
                                                                                                                                                                                                                                           aaTACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTACCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGAGAGTTTGTCGATTGGCGCTACCCAGTCGCAGGTGAAGAAATGCGCCAGACCGTCCGGGGGATAAAACTTCTCTTAAAAAAGaaaaa  >  1:482541/1‑238 (MQ=255)
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                              
CGTACTGCTCGGCGGCGCGCTGATCGGCGATCGGCTCGACGCGAACGGCGCAGTATTTGTACTCCGGCGTTTTCGTAATCGGGCTTAAGTTTTCGGTAACCAGCTCGTTACAGGCACCAATCCACCACTGGTAGGTCATGTAAATCGCCCCTTTGTTCGGACGATC‑GCTGACCTGCGCA‑CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACC‑AATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGG‑TATT‑GATTTGTGCGTAGCCA‑GGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCATCGAACGGCAAGAGTAGTGACCAACTTCACGCACCGTTGACAGTACCATCGGGTACTCGTCGGTGAGTTTGTCGATTGGCGCTACCCAGTCGCAGGTGAAGAACTGCGCCAGACCGTTCGGGGTATCAAACTTCTCTTTAAACAGATAAG  >  NC_000913/4297276‑4297746

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A