Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F27 I0 R1
|
322 |
127.1 |
2757226 |
91.8% |
2531133 |
223.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
1,213,890 |
A→T |
12.3% |
I57K (ATA→AAA) |
bluR ← |
repressor of blue light‑responsive genes |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,213,890 | 0 | A | T | 12.3%
| 307.8
/ 3.5
| 114 | I57K (ATA→AAA) | bluR | repressor of blue light‑responsive genes |
| Reads supporting (aligned to +/- strand): ref base A (35/62); new base T (10/6); total (46/68) |
| Fisher's exact test for biased strand distribution p-value = 5.65e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.74e-01 |
Only 100 of 117 total aligned reads displayed.
GGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGCCACAATTCCTCCTTGCGGTCACAAATCTCCGTCGCCTGTACACGACCCAATAATACTTTGTACAATATACGC > NC_000913/1213654‑1214128
|
gggAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATc < 1:313977/239‑1 (MQ=255)
gggAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGGCATCTTCCGTATCCTGGCTG‑GTGGTTTCCCGTAATGCTTTAACTTTGCCT‑ACA‑AGGACGCCATTACTTAt > 1:1073897/1‑238 (MQ=255)
tttggtaTCAAGCGCGAGACGCTGGCGAACAGGAAGGTAAAAATGATTAAGCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCGCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGc < 2:315886/232‑1 (MQ=255)
gttgtGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGc < 1:963018/238‑1 (MQ=255)
aTCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GGGGTTTCCCGTAAAGCTTTAACTTTTCCT‑ACA‑GGGACGCCCTTTCTTTTCCAACACCTGAttt > 2:1217340/1‑237 (MQ=255)
aaGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGTGGGGTTTCCA‑TAATGCTTTAACTTTTCCTCACA‑GGG‑CGCCATTTGTTATCCaaaccttttatcctt > 2:81400/1‑226 (MQ=255)
aaGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTTTCCAACCCTTGATttct > 1:11014/1‑238 (MQ=255)
aaGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATctct > 1:69397/1‑238 (MQ=255)
aaGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GGGGTTTCCAGTAATGCTTTAACTTTTCCT‑CCA‑GGGACGCCATTCATTTTCCCACCCTTGATttct > 1:533994/1‑238 (MQ=255)
cccatacctttgctaaCAGGTAATTATACATTATTAATCAATTTGTATCCTGGGTACCTTGGCCCCAGTGAAATTATTCGCGCGCGTATTGTGGCAGGATTAGCCATGCGAAGAATTGGAATCTTCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGGATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑At < 2:739940/225‑1 (MQ=255)
gAAGGTAAACATTATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGGTCTCTTCG‑ATGCGTTGTATGtc < 2:1160522/232‑1 (MQ=255)
gAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGGTCTCTTCG‑ATGCGTTGTATGtc > 1:1160522/1‑232 (MQ=255)
gaattagcAATTTGTCTACTGGGTACTCTCGGCCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCgg < 1:407976/232‑1 (MQ=255)
gATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCACCTTCCGTATCCTGGCTG‑GGGGTTTCCCGTAATGCTTTAACTTTTCCC‑ACA‑GGGCTGCCCTTACTTTTCCCACCCTTGATATCTTCG‑TTCGTTTGATTGTCT‑TTTTTCTCAAagagcctg > 2:88833/1‑235 (MQ=255)
ttAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCCTTACTTTTCCCACCCTTGTTTTCTTCT‑ATCGGTTTGTTGTCT‑TTTTTATCAAaaaggggggg > 2:1273508/1‑233 (MQ=255)
ttAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCCAAGAGTCGgt > 1:859196/1‑238 (MQ=255)
ttAATCAATTGATCCTCTGGGTACTCTCGACCCAGGGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGgtg < 1:810042/239‑1 (MQ=255)
cAATTTATTTCCTGGTTACTTCCGACCCAGTGAAAAAATTCTCGCGCGTTGTTTGGCAGGATTAGCCATTCTAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGc < 2:620749/239‑1 (MQ=255)
cAATTGATCTACTGGGTTCTCTCGAACCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGc < 1:1217340/239‑1 (MQ=255)
ttGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCCGTCATCTTCCATATCCTGGCTG‑GTGGTTTTCAGTAATGCTTTAACTTTGCCT‑CCAGGGGACGCC‑TTACTTTTTCAACGCTTTGTCTTCTCC‑ATGCCTTTTATGTCT‑TTCTCTTTAAagacgcaggttccccctt > 2:141185/1‑224 (MQ=255)
ttGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGCAATGCTTTAACTTTGCCT‑ACA‑GGGGCGCCCTTACTTATCCAACGCTTGATCTCTTCG‑GTCCGGTGTTGTTCC‑TCTCTATCAAAAAGTCGGGGTCCGGCtt > 2:810042/1‑239 (MQ=255)
gATCTACTGGGTTCTCTCGACCCAGTGAAATAATTCTGCCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCa < 2:66353/239‑1 (MQ=255)
gggTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTTCCT‑TCA‑GGGAAGCCATTACTTTTCCAAACCTTGATACTTTCG‑ATGCGTTGTTTGTTT‑TTTTTCTCAAAAAGACGGGGTCCCCCTTccaggggggg > 2:722508/1‑230 (MQ=255)
gggTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑CCC‑GGGACGCCCTTACTTATCCAAAGCTTGATCTCTTCG‑AGGCGTTGTTTGGCT‑CCTTCATCAAAAAGTCGGTTTCCCCCCTCACTGGGC‑tg > 1:260704/1‑239 (MQ=255)
gggTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGGATCCTGGCTG‑GTGGTTTCCCGTAATGCTTTTACTTTGCCT‑TCA‑TGGGCGCCATTACTTTTCCAACCCCTGATCTCTTCGCGTCCGTT‑TTTGTTC‑TCTTCCTCAAAAAGTCCGTGTCCGCCCTcccctccgtg > 2:235486/1‑230 (MQ=255)
tctcGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCg < 1:519228/185‑1 (MQ=255)
tcGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAACTTCCATACTCTCTTCTTGCAGGTGGCTTCAGTCATCTTCCGAATTCCGGCTG‑GCGGTTTCCAGACATGATTTAACTTTTCCT‑TCA‑GGGACTCCCTTCCTTCTCCAATGCTTGATCCCTTAC‑ATGCGTTGTATGTTT‑TCTTTTTCAAATAGACGGGGTCTGCCTTCCCTGCGC‑CTTGGcttt > 1:365937/1‑238 (MQ=255)
cGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCCGTAATGCTTTAACTTTTCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTTCGC‑CTTGGTTTTaa > 1:373741/1‑239 (MQ=255)
aCCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GGGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAAAGTCGGGGTCCCCCCTCACTGCGC‑TGTGGGTTTaaaa > 2:1172434/1‑237 (MQ=255)
cccAGTGAAATAATTCTCGCGGGTAGTTTGGCAGGATTGGCCATGCAAATAATTGACATCATCTCTTCTGGCAGGCGGTTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGGTTGATCTCTTCC‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAATCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACa < 1:165600/238‑1 (MQ=255)
gTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGTTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCCTTACTTATCCAACGCTTGATCTCTTCG‑ATCCGTTTTCTGTTT‑TCTTCATCCAAAAGTCTGGGCCCCCCTTTAccccccgttgggtttaccaaaac > 2:131326/1‑216 (MQ=255)
gTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCCGTAATGCTTTAACTTTTCCC‑TCA‑GGGACGCCCTTTCTTTTCCAACCCTTGATCTCTTCT‑ATGCCTTTTATTTCT‑TCTTCATCCAAAAGTCCGGTTCCCCCTTCCCTCCGC‑CGTGGGTTTAAAAAAACg > 2:77000/1‑239 (MQ=255)
gTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGACGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGAAGCCCTTACTTATCCAACCCTTGATCTCTTCC‑ATGCGTTGTATTtct > 2:519228/1‑185 (MQ=255)
ctctCGCGTAGTTTCACAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTGGCCTTGCGAAACCCAGCTG‑GTGGTTTCCCGGAATTCTTTAACTTTGCCT‑CCA‑TGGACGCCATTACTTTTCCCACCCTTGGTTTCTTCG‑GTGCGTTGTATGTCT‑TTTTCTTTAAAGAGTCGGTGTCCGCCTTCCATCCGC‑CGTGGTTTTTACAAACCGTAACGGGGttc > 2:122146/1‑238 (MQ=255)
tcGCGCGTTTTTTGGCGGGTTTAGCCATGCGAAGATTTGCCATCACCGCTTCTTGCAGGCGGCTCCAGTCATTTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGc < 2:1154569/239‑1 (MQ=255)
tgtgttaaagagacAGGATTGGCCAGGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCa < 1:486503/226‑1 (MQ=255)
tAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGGTTTAACAAACCGTAGCGGCGTTGCCAGGccc > 1:64674/1‑239 (MQ=255)
tGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTCTCC‑TGTGGTTTTAAGAAACCGTAGCGGCGTTGCCAGGCCCGgcga > 1:299356/1‑239 (MQ=255)
ggATTAGCCATGCGAAGAAGTGCCATTATCTCTTCTTGCATGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGAc < 1:712059/239‑1 (MQ=255)
gATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑CCA‑GGGACGCCATTACTTATCCAACGCTTGATCTATTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAAAGTCGGTGTCCGCCTTCCCTCCCC‑TTTGGTTTTAACAAAACGTAGCGCGGTTGCCAGACCCgggggggggac > 2:50502/1‑230 (MQ=255)
gATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGgtg > 1:611416/1‑175 (MQ=255)
aTTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGa < 2:69397/236‑1 (MQ=255)
aGCCCTGCGAAAAATTCACTTTATCTCTTTTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGAt < 2:1135516/239‑1 (MQ=255)
gCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGGGAGTGCACGGATTAATc > 1:587403/1‑238 (MQ=255)
cGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCCGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTCATTCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGATTGATTTCTTCG‑ATGGGTTGTAATGCT‑TCTTCATCAAACAGTCGGTGTTCGCCTTCACTGCGCTTGGGGTTTTACCAAACCG‑AGCGGCCATGCCCAGCCCCgagggcgttgttctttaaac > 2:486503/1‑221 (MQ=255)
cGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCCAAGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAAAGTCGGTGTCCGCCTTTCCTGCGC‑TGTGGTTTTTACAAAACGCGACGGCGGTGCCCGGCCCGGAGAGTGCCAGGaaaaaacc > 2:769050/1‑231 (MQ=255)
aagaaTTGACATCATCTCTTCGTGCAGGCGGCTTCAGTCAACTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCg < 1:122146/238‑1 (MQ=255)
agaaTTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCAGAGAGTGACAGGATTAATCCCGCa < 1:32408/239‑1 (MQ=255)
aaaTTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTTCCCTGGCTG‑GTTGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCaa < 2:373741/238‑1 (MQ=255)
tGACATCATCTCTTCTTGTAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCCGTGTCCGCCTTCACTGCGC‑TGTGGGTTTAACAAACCCTAACGGCGTTTCCAGGCCCGGGAAGGGAAAGGAATAAACCCGCAAAGt > 2:624865/1‑238 (MQ=255)
gACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTc < 1:1053370/239‑1 (MQ=255)
atcatcTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTTCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑CTGCGTTTTATGTCT‑TCTTCATCCAAAAGTCGGTGTCCGCCTTCACTTCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTTCCAGGCCCCGAGAGGGAAAGGATTAATCCCGCAACGGTCAGc > 2:1145946/1‑239 (MQ=255)
ctcttTTCTTGCGGGCTGTTCCCGTTATTTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAAc < 2:533994/238‑1 (MQ=255)
cAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGc < 1:722508/239‑1 (MQ=255)
gcggcTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCg > 1:446508/1‑100 (MQ=255)
gcggcTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCg < 2:446508/100‑1 (MQ=255)
cAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGc < 1:1204354/239‑1 (MQ=255)
tttctggctg‑gTGGTTTCAAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCCTTTCTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGTGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGc < 1:1045585/222‑1 (MQ=255)
tCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGATGGACAGGATTAATCCCGCAACGTTCAGCCACAGCACCAAATCCTTAATAAGCCACAATTcctcctgt > 2:760102/1‑237 (MQ=255)
tCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGCCACAATTCCTCCTTg < 1:1271833/239‑1 (MQ=255)
gctg‑gTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGtt > 2:181266/1‑191 (MQ=255)
gctg‑gTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGtt < 1:181266/191‑1 (MQ=255)
gctg‑gTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTTCACTAAGCCACAATTCCTCCTTGCGGt > 1:1036275/1‑238 (MQ=255)
g‑gtggtTTCCTGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAAGGCGTGATCTCTTCG‑ATGCGTTGTATGTCC‑TCTGCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGCCACAATTCCTCCTTGCGGTcaca < 2:260704/239‑1 (MQ=255)
gtgggTTCCAGTAATGCTTTAACGTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGACT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAACCCGTAGCGGCGTTTCCAGGCCCGGAGAGTGACAGGATTAATCCCACGACGTTCCGCAACATCACCAAGGCTGAAATAAGCCACAAATcctcctgtcccatata > 2:1045585/1‑228 (MQ=255)
tCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGCCACAATTCCTCCTTGCGGTCACAAATCTcc < 1:1273508/239‑1 (MQ=255)
cgttAATGCTTTAACTGTGCCT‑ACT‑GGGACGCCCTGCCTTATGCAACGCTTTATCCCTTCG‑AAACGTTATATGCCT‑CCTTCATCGAGGTGTCGGTGTACGCCTTCACGGCGC‑TGTGGTTTTAACAAACCGTAGCGGCCTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCGACGTTCAGAGACATAAACAATGCGGTAATAAGCCACAATTCCTCCTTGCGGTCACAAATCTCCGt < 2:365937/236‑1 (MQ=255)
ccttttttgtttACCTTTGCCT‑ACC‑GGGACTCCATTATTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAGGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGGTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGCCACAATTCCTCCTTGCGGTCACAAATCTCCGt < 2:503476/230‑1 (MQ=255)
cAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGCCACAATTCCTCCTTGCGGTCACAAATCTCCGt < 1:624865/239‑1 (MQ=255)
aaTGCTTTAACTTTGCCT‑ACC‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGCCACAATTCCTCCTTGCGGTCACAAATCTCCGTCGc < 1:235486/238‑1 (MQ=255)
aaTGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGCCACAATTCCTCCTTGCGGTCACAAATCTCCGTCGc < 1:88833/238‑1 (MQ=255)
ttttACTTTTCCT‑GCA‑GGGACCCCTTTTCTTAACCAACCCTTGATCTCTTCG‑ATGCGTTTTATGTCT‑TCCTCATCAAAGTGTCGGTGTCCGCCTTCACGGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGCCACAATTCCTCCTTGCGGTCACAAATCTCCGTCGCCTGTa < 2:46219/238‑1 (MQ=255)
tttaCTTTGCCT‑CCA‑GGGACCCCCTTTCTTTTCCAACGTTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGCCACAATTCCTCCTTGCGGTCACAAATCTCCGTCGCCTGTaca < 2:587403/236‑1 (MQ=255)
ttAACTTTGCCT‑ACA‑GGGAAGCCATTACTTAACCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGCCACAATTCCTCCTTGCGGTCACAAATCTCCGTCGCCTGTaca < 1:141185/239‑1 (MQ=255)
agggaccggCCT‑TCA‑GGGATCCCATTACTTATCCAACGGTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCAGCAAAGGGTCGGTGACCGCCTTCCCTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGCCACAATTCCTCCTTGCGGTCACAAATCTCCGTCGCCTGTaca < 2:299454/231‑1 (MQ=255)
tttttGTCT‑TCA‑GGGACGCCATTCCGTTTCCAACGGTTTATCGCTTCG‑ATGCGTTGTATTTCTGTCGTCA‑AAAATAGGCGGTGTCGGCCCTCCCCTCGC‑TGGGGATTTAACAAACCGTAGCGGTGTTGCAAGGCCCGGAGAGTGACATGATTAATCCCGCAACGTTCAGCAACATCACCAATGATGTAATAAGCCTCAATTCCTCCTTGCGGTCACAAATCTCCTTCGCCTTTACACGa < 2:740056/237‑1 (MQ=255)
cttttGCCT‑ATC‑GGGACGCCCTTTCTTTTCCAACGCTTTATCTCTTCG‑ATGTGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGGCTTCCCTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGCCACAATTCCTCCTTGCGGTCACAAATCTCCGTCGCCTGTACACGa < 2:299356/237‑1 (MQ=255)
ctcttGCCT‑CCG‑GGTGCGCCTTTACTTTTCCAACGCTTGATCTTTGCG‑ATGCTTGGTATGCCT‑TCTTCATCAAAGAGCGGGTGTCCGCCGTCACTGCGA‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGCCACAATTCCTCCTTGCGGTCACAAATCTCCGTCGCCTGTACACGa < 2:1268929/236‑1 (MQ=255)
aCTTTTCCA‑TCA‑GGGGCGCCTTTTCTGATCAAACGCTTGATGTCTTCG‑ATGCGTTGTATGTCT‑TTCTCATCAAAGAGGCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAAGCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGCCACAATTCCTCCTTGCGGTCACAAATCTCCGTCGCCTGTACACGa < 2:1073897/239‑1 (MQ=255)
aCTTTGGCT‑ACA‑GGGCCTCCATTACTTATCCAACGGTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGCCACAATTCCTCCTTGCGGTCACAAATCTCCGTCGCCTGTACACGa < 1:523082/239‑1 (MQ=255)
aCTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGCCACAATTCCTCCTTGCGGTCACAAATCTCCGTCGCCTGTACACGa < 1:1367442/239‑1 (MQ=255)
aCTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGCCACAATTCCTCCTTGCGGTCACAAATCTCCGTCGCCTGTACACGa < 1:77000/239‑1 (MQ=255)
aCTTGGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGCCACAATTCCTCCTTGCGGTCACAAATCTCCGTCGCCTGTACACGa < 1:769050/239‑1 (MQ=255)
ttttCCC‑ACA‑GGGACGGCCTTTCTTATCCAAGCCTTGATCTCTTCG‑ATGCGTTGGTTGTCT‑TCTTCAGCAAAGAGGCGGGGTCCGCCGTCACTGCGG‑TGTGGTTTTAACACACCGTAGAGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAAGCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGCCACAATTCCTCCTTGCGGTCACAAATCTCCGTCGCCTGTACACGAcc < 2:914228/239‑1 (MQ=255)
tttGCCT‑ACA‑GTGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCAGCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGCCACAATTCCTCCTTGCGGTCACAAATCTCCGTCGCCTGTACACGa < 1:1369374/237‑1 (MQ=255)
gCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCAc > 2:355526/1‑173 (MQ=255)
gCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGCCACAATTCCTCCTTGCGGTCACAAATCTCCGTCGCCTGTACACGACCCaa > 1:46219/1‑239 (MQ=255)
ccT‑AAA‑GGGACTGCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGCCACAATTCCTCCTTGCGGTCACAAATCTCCGTCGCCTGTACACGa < 1:1323633/233‑1 (MQ=255)
cT‑ACA‑GGGTCCGCATTTCTTTACCAACGGTTGATTCCTTCG‑ATGCGTTGTATGGCT‑TCTTCATCAAAGAGTCGGTGGCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGCCACAATTCCTCCTTGCGGTCACAAATCTCCGTCGCCTGTACACGACCCaata < 2:64674/239‑1 (MQ=255)
cT‑ACA‑GGGACGCCATTTCTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGCCACAATTCCTCCTTGCGGTCACAAATCTCCGTCGCCTGTACACGACCCaata < 1:1212664/239‑1 (MQ=255)
cgtcA‑GGGACCCCTTTTCTTTTCCAACGCTTGATCTTTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGCCACAATTCCTCCTTGCGGTCACAAATCTCCGTCGCCTGTACACGACCCaata < 2:859196/236‑1 (MQ=255)
gACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGCCACAATTCCTCCTTGCGGTCACAAATCTCCGTCGCCTGTACACGACCCAATAATACt < 1:956048/237‑1 (MQ=255)
gACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGCCACAATTCCTCCTTGCGGTCACAAATCTCCGTCGCCTGTACACGACCCAATAATACt < 1:996675/237‑1 (MQ=255)
aCGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGCCACAATTCCTCCTTGCGGTCACAAATCTCCGTCGCCTGTACACGACCCAATAATACttt < 1:81400/238‑1 (MQ=255)
cGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGCCAGGATTAATCCCGCAACGTTCAGCACCATCACCAATCCTGTAATAAGCCACAATTCCTCCTTGCGGTCACAAATCTCCGTCACCTGAAAACGACCCAAAAAAAcctgc > 2:1323633/1‑234 (MQ=255)
cGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGCCACAATTCCTCCTTGCGGTCACAAATCTCCGACGCCTGTACACGACCCaata > 1:299454/1‑230 (MQ=255)
tACTTAACCAACGCTTGATCTCTTCG‑ATGCGTTGGATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGCCACAATTCCTCCTTGCGGTCACAAATCTCCGTCGCCTGTACACGACCCAATAATACTTTGTACAata < 1:50502/239‑1 (MQ=255)
aTCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGCCACAATTCCTCCTTGCGGTCACAAATCTCCGTCGCCTGTACACGAcc < 1:981948/214‑1 (MQ=255)
aTCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGCCACAATTCCTCCTTGCGGTCACAAATCTCCGTCGCCTGTACACGACCCAATAATACTTTGTACAATATACGc > 1:379066/1‑239 (MQ=255)
aTCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGCAACAATTCCTCCTTGCGGTCACAAATCTCCGTCGCCTGTACACGAcc > 2:981948/1‑214 (MQ=255)
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GGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTG‑GTGGTTTCCAGTAATGCTTTAACTTTGCCT‑ACA‑GGGACGCCATTACTTATCCAACGCTTGATCTCTTCG‑ATGCGTTGTATGTCT‑TCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGC‑TGTGGTTTTAACAAACCGTAGCGGCGTTGCCAGGCCCGGAGAGTGACAGGATTAATCCCGCAACGTTCAGCAACATCACCAATGCTGTAATAAGCCACAATTCCTCCTTGCGGTCACAAATCTCCGTCGCCTGTACACGACCCAATAATACTTTGTACAATATACGC > NC_000913/1213654‑1214128
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
