Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F27 I0 R1 322 127.1 2757226 91.8% 2531133 223.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,893,634 A→C 10.4% T291P (ACC→CCC)  yidZ → putative DNA‑binding transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,893,6340AC10.4% 386.1 / 2.5 168T291P (ACC→CCC) yidZputative DNA‑binding transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base A (76/57);  new base C (2/28);  total (80/88)
Fisher's exact test for biased strand distribution p-value = 2.81e-07
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 171 total aligned reads displayed.

ACAGAGCGATACCTGGGCGCTGGACAATGTGTTACAGGAGCTGGGACGCGAACGCACGATTGCTATGAGCCTGCCGGAATTCGAGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGTAAAAAAGTTGTAATAAGCTTGTCTGAATCGAACTTTTAGCCGCTTTAGTCTGTCCATCATTCCAGTAAATGATTACTCTTGTATTCATAATGGA  >  NC_000913/3893396‑3893858
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                 
aCAGAGCGATACCTGGGCGCTGGACAATGTGTTACAGGAGCTGGGACGCGAACGCACGATTGCTATGGGCCTGCCGGAATTCGAGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTa                                                                                                                                                                                                                                   <  1:3034/239‑1 (MQ=255)
    agCGATACCTGGGCGCTGGACAATGTGTTACAGGAGCTGGGACGCGAACGCACGATTGCTCTGAGCCTGCCGGACTTCGCGCAGTCACTGTTTCTGGCAGCGCCCCCCGACAATCTGCTCCTGGCGACCG‑CGCCGCGCTACTGTCCGTCCCACAATCACCTCCCTCAACTGCCGTTGGTTGCTCTTCCTCTCCCGCTTGACGCCCCCAAG‑CAAAAAAAACGGGAAGTACCTTTTAcccc                                                                                                                                                                                                                               >  2:968259/1‑238 (MQ=255)
    agCGATACCTGGGCGCTGGACAATGTGTTACAGGAGCTGGGACGCGAACGCACGATTGCTATTAGCCTGCCGGAATTCGAGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CCAAAAAAGCGGGAAATTCCTTTTTcccc                                                                                                                                                                                                                               >  2:1041157/1‑238 (MQ=255)
    agCGATACCTGGGCGCTGGACAATGTGTTACAGGAGCTGGGACGCGAACGCACGATTGCTATGAGCCTGCCGGAATTCGAGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTCCAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCCCCCGTTTTACGAAAACCCG‑CAAAAAAAGCGGGAAATCCCCTTTccccc                                                                                                                                                                                                                               >  2:912848/1‑238 (MQ=255)
    agCGATACCTGGGCGCTGGACAATGTGTTACAGGAGCTGGGACGCGAACGCACGATTGCTATGAGCCTGCCGGAATTCGAGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCGTAAACTGCCGTTGGTTGCCCTTCCTTCCCCGTTTGACGAAAGCCGG‑CAAAAAAAGATGGAAGTCCCTTTTAccc                                                                                                                                                                                                                                >  1:1338693/1‑238 (MQ=255)
       gATGCCCGGGCGCGGGACAATTTGTTACAGGGGCGGGGACGCGAACGCACGATTCCTATGAGCATGACGGAATTCGCGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCctgct                                                                                                                                                                                                                            <  2:77646/239‑1 (MQ=255)
        cggttggtattaaggggcaggtgtTACAGTAGCTGGGCCGCAAACGCTCGTTTGCTATGGGCCGTCCGGAATTCGAGCAGTCACTGTTTATGGCAGCCAAACCCGACAACCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCctgct                                                                                                                                                                                                                            <  2:488774/218‑1 (MQ=255)
        aTACCTGGGCGCTGGACAATGTGTTACAGGAGCTGGGACGCGAACGCACGATTGCTATGAGCCTGCCGGAATTCGAGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCctgct                                                                                                                                                                                                                            <  1:1356156/238‑1 (MQ=255)
         tACCTGGGCGCTGGACAATGTGTTACAGGAGCTGGGACGCGAACGCACGATTGCTATGAGCCTGCCGGAATTCGAGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGGTGCGCTTCCCCTCCCGTTTGACGAAACCCAC‑CCAAAAAAGCTGGAAGTTCCTTTTACCctgcttg                                                                                                                                                                                                                          >  2:94474/1‑237 (MQ=255)
         tACCTGGGCGCTGGACAATGTGTTACAGGAGCTGGGACGCGAACGCACGATTGCTATGAGCCTGCCGGAATTCGAGCAGTCACGGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTAACACCAACTCCATCAACTGCCGTTGGTTGCCATTCCCCCCCCGTTTGCCGAAACCCAC‑CAAAAAAAACGGAAAATTCCTTTTAccccgatgg                                                                                                                                                                                                                          >  2:629605/1‑233 (MQ=255)
             ttttttaaaggacaggtgtTACAGGGGGTGGGACCGGAACGCACGATTGCTTTGAGCCTGCCGGAATTCGGGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑C‑AAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCAt                                                                                                                                                                                                                     <  2:1319823/224‑1 (MQ=255)
              gggCGCTGGACAATGTGTTACAGGAGCTGGGACGCGAACGCACGATTGCTATGAGCCTGCCGGAATTCGAGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCAt                                                                                                                                                                                                                     >  1:1124964/1‑239 (MQ=255)
               ggCGCTGGACAATGTGTTACAGGAGCTGGGACGCGAACGCACGATTGCTATGAGCCTGCCGGAATTCGAGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTTGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGCAGTTCCTTTTACCCTGCTTTGGCCTa                                                                                                                                                                                                                    >  1:786441/1‑239 (MQ=255)
                  ttgtgACAATTTTTTACAGGGGCTGGGCCGGAAACCCCCGGTTCTGTTGACCCTGCCGTAATTCGAGCAGCCACGGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATaaa                                                                                                                                                                                                                  <  2:766757/234‑1 (MQ=255)
                  gtcggAAAATGTGTTAAGGGGGCGGGGCCGCGAACGCACGATTGCTTGGGCCCTCCCGAAATCGGAGCAGCCACGGTTTATGGAAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGTTACTGTCAGTACTACAATAAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATaaa                                                                                                                                                                                                                  <  2:945832/235‑1 (MQ=255)
                   cTGGACAATGTGTTACAGGAGCTGGGACGCGAACGCACGATTGCTATGAGCCTGCCGGAATTCGAGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACg                                                                                                                                                                                                                >  1:538287/1‑239 (MQ=255)
                    tGGACAATGTGTTACAGGAGCTGGGACGCGAACGCACGATTGCTATGAGCCTGCCGGAATTCGAGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCCTAAACgg                                                                                                                                                                                                               >  1:699412/1‑239 (MQ=255)
                      gacatgttttacccggggCTGGGCCGCGACCGCACGTTTGTTATGGGCCGCCCGGAATTCGGGCAGTCCCTGTTTAGGGCAGCGCAACCCGACAATCTGTTACGGGCGCCCG‑GGCCGAGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGaa                                                                                                                                                                                                             <  2:584344/222‑1 (MQ=255)
                      gACAATGTGTTACAGGAGCTGGGACGCGAACGCACGATTGCTATGAGCCTGCCGGAATTCGAGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCCCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAACCCAG‑CAAAGAAAACGGGCAGGTCCTTTTACCCCGCCGTGGCATAAACGaaa                                                                                                                                                                                                             >  2:523409/1‑239 (MQ=255)
                       aCAATGTGTTACAGGGGCTGGGACGCGAACGCACGATTGCTATGAGCCTGCCGGAATTCGAGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGaa                                                                                                                                                                                                             <  1:345351/238‑1 (MQ=255)
                       aCAATGTGTTAAAGGAGCTGGGACGCGAACGCCCGATTGCTATGAGCCTGCCGGAATTCGAGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGaa                                                                                                                                                                                                             <  1:922295/238‑1 (MQ=255)
                           tgtgTTACAGGAGCTGGGACGCGAACGCACGATTGCTATGAGCCTGCCGGAATTCGAGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTCCCCTTCCCCCCCCCTTTGCCCGAAACCAG‑CAAAAAAAGCTGGAAGTTCCTTTTTCCCCTCTTGGGCCAAAACGGAAAAGcc                                                                                                                                                                                                        >  2:1012713/1‑239 (MQ=255)
                            ttgttccaggtctggggcccgaaaCGCAGGATTGCTTTGCGCCTGCCGGAATTCGAGCATTCACTGTTTGTGGCGCAGCAACCCGACAATCGGCTA‑TGGGCACCGCCGCCGCGTTACTGTCAGTTCTAAAATCACCCCCACAAACTGCCGTTGTTTGCTCTTCCTCCCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTCCCCTGCTGTGGCATAAACGGAACAGCCa                                                                                                                                                                                                       <  2:407766/217‑1 (MQ=255)
                              tttACAGGAGCGGGGACGCGAACGCACGATTGCTATGAGCCTGCCGGAATTCGAGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCAt                                                                                                                                                                                                      <  1:97262/237‑1 (MQ=255)
                                tACAGGAGCTGGGACGCGAACGCACGATTGCTATGAGCCTGCCGGAATTCGAGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCCTCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTTACGAAAGCCAG‑CAAAAAAAGCCGGAAATTTCCTTTACCCTCCTGTGGCAAAAAAGGAACAGCCaaaaa                                                                                                                                                                                                   >  2:909445/1‑238 (MQ=255)
                                tACAGGAGCTGGGACGCGAACGCACGATTGCTATGAGCCTGCCGGAATTCGAGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGc                                                                                                                                                                                                                       >  2:1162343/1‑219 (MQ=255)
                                tACAGGAGCTGGGACGCGAACGCACGATTGCTATGAGCCTGCCGGAATTCGAGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGc                                                                                                                                                                                                                       <  1:1162343/219‑1 (MQ=255)
                                tACAGGAGCTGGGACGCGAACGCACGATTGCTATGAGCCTGCCGGAATTCGAGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAAAAGCCATaa                                                                                                                                                                                                    >  1:355626/1‑238 (MQ=255)
                                     gAGCTGGGACGCGAACGCACGATTGCTATGAGCCTGCCGGAATTCGAGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTCCTACAATCAACTCCATCAACTGCCGTTGGTTGCTATTCCTCTCCCGTTTGACGAAAGCCCG‑CACAAAAAACTGGAAGTTCCTTTTACCCGGTTGGGGCCAAAACGGAAAAACCACAAACCaaa                                                                                                                                                                                              >  2:735703/1‑239 (MQ=255)
                                     gAGCTGGGACGCGAACGCACGATTGCTATGAGCCTGCCGGAATTCGAGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTAcc                                                                                                                                                                                                                                 >  1:1362560/1‑204 (MQ=255)
                                     gAGCTGGGACGCGAACGCACGATTGCTATGAGCCTGCCGGAATTCGAGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTAcc                                                                                                                                                                                                                                 <  2:1362560/204‑1 (MQ=255)
                                     gAGCTGGGACGCGAACGCACGATTGCTATGAGCCTGCCGGAATTCGAGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCAAAAACGGAAAAGCCAAAAACCGaa                                                                                                                                                                                              >  2:158227/1‑239 (MQ=255)
                                       gCTGGGACGCGAACGCACGATTGCTATGAGCCTGCCGGAATTCGAGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGa                                                                                                                                                                                            >  1:708798/1‑239 (MQ=255)
                                            gACGCGAACGCACGTTTGCTATGAGCCTGCCGGAATTCGAGCAGTCACTTTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGt                                                                                                                                                                                        <  1:20765/238‑1 (MQ=255)
                                                       ccGATTGCTATGAGCCTGCCGGAATTCGAGCAGTCACTGTTTAGGGCAGCGCAACCCGCCAATCGTCTACTGGAGCCCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTCCCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGa                                                                                                                                                                            <  1:599297/238‑1 (MQ=255)
                                                         ggttacTATGAGCCTGCCGGAATGCGAGCAGTCTCTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGTCCG‑CGCCGCGCTATTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTCCCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGaaa                                                                                                                                                                          <  1:620509/234‑1 (MQ=255)
                                                         gATTGCTAGGAGCCTGCCGGAATTCGAGCAGTCACTGTTTATGGCAGCGCAACCCGAAAATCTGCTACTGGCGACCG‑GGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGaaa                                                                                                                                                                          <  1:1210938/239‑1 (MQ=255)
                                                            tctttggggccgccgggATTTCGGGCGGTCCGTTTTTCTGGGCGCCCAACCCGAAAATCTGCTCCTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCAGCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTCCCCTGCTGTGGAATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGaaa                                                                                                                                                                          <  2:196118/221‑1 (MQ=255)
                                                                 tGAGCCTGCCGGAATTCGAGCAGTCACTGTTTATGGAAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCACCTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTaaa                                                                                                                                                                  <  1:396455/239‑1 (MQ=255)
                                                                     ccTGCCGGAATTCGAGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCCCCCGATTGACGAAAGCCGG‑AAAAAAAAGCTGGAAGCTCCCTTTACCCTGCTGCGGCATAAACGGAAAAGCCAAAATCCGAAGATCGTCTGGTTAAGGGAAACCATTaaaaaac                                                                                                                                                              >  2:318564/1‑237 (MQ=255)
                                                                       tGCCGGAATTCGAGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCTTAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTCCGGGAAACCATTAAAAACCtt                                                                                                                                                            >  1:561073/1‑239 (MQ=255)
                                                                         ccGGAATTCGAGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CACAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGACTAAACGGAACAGCCATAATCCGAAAATCGTCTGGTTTAGGGAAACCATTAAAAAACtta                                                                                                                                                           >  2:867164/1‑237 (MQ=255)
                                                                         ccGGAATTCGAGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCttt                                                                                                                                                           >  1:482708/1‑238 (MQ=255)
                                                                                 cGAGCAGTCACTTTTTATGGGCGCCCACCCCGACAATCTGCCACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTCCCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGa                                                                                                                                                 <  1:761842/239‑1 (MQ=255)
                                                                                   aGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACCCGTCGATg                                                                                                                                               >  1:432705/1‑239 (MQ=255)
                                                                                         cccTGTTTAGGGCAGCGCAACCCGACAATCTGCTCCTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATaa                                                                                                                                         <  1:158227/237‑1 (MQ=255)
                                                                                                  tGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGTTCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑AACCTCCGAGGGCATAACCCAAACGt                                                                                                                                >  2:46355/1‑239 (MQ=255)
                                                                                                        cgcAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAACCGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTTGATGGCTTAACCGAATCGTATGaa                                                                                                                           >  1:940229/1‑238 (MQ=255)
                                                                                                        cgcAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTCCGGGAAACCATTAAAAACCTTTAACGC‑CCGATGGCAAAACGAAAACGTagtaaa                                                                                                                          >  2:180853/1‑234 (MQ=255)
                                                                                                                gACAATCTGCTACTGGCGCCCG‑CTCCGCGCTACTTTCAGTCCTCAAATCAACTCCATCAACTGCCGTTTGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGAccc                                                                                                                  <  1:649148/239‑1 (MQ=255)
                                                                                                                  aactCTGCTCCGGGCCCCCC‑CGCCGCGTCTCTTCCAATACTACAATCAACCCCAACAACTGGCGTTGGTTGATCTTCCTCTCCCGTTTGACGAAACCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCaa                                                                                                                <  2:355626/236‑1 (MQ=255)
                                                                                                                      cTGCCACTGGCGACCG‑GCCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTc                                                                                                            <  1:790899/239‑1 (MQ=255)
                                                                                                                       tGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCTAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTca                                                                                                           >  1:831050/1‑239 (MQ=255)
                                                                                                                               gcgcCCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGc                                                                                                                                                                                                                       <  2:188770/124‑1 (MQ=255)
                                                                                                                               gCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGc                                                                                                                                                                                                                       >  1:188770/1‑124 (MQ=255)
                                                                                                                                   ccg‑cgccgcgCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGACTGGTTACGGGAACCCATTAGAAACCTTT‑ACGCGTCGATGTCACACACCAATCGAAGGAAACGCGACCCAATTTCACAAAAAAAAGTa                                                                                               >  2:1378518/1‑239 (MQ=255)
                                                                                                                                     g‑cgccgcgcTACTGGCAGTACTACAATCAACCCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGAGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGAAAAACATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGTaaa                                                                                             <  1:1237764/239‑1 (MQ=255)
                                                                                                                                       gcccccgttACTGTCATTCATACATTAAACCCCACAAACGGCCGTGGGTTGCTCTTCCTTTCCCGTTGGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAAGAAAATGTaaaa                                                                                            <  2:771087/231‑1 (MQ=255)
                                                                                                                                        gccgcgcTACTGTCAGTACACAAATCAACTCCATCAACTGCCGTTGGTTGCTTTTCCTCGCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGTaaaa                                                                                            <  1:1041157/238‑1 (MQ=255)
                                                                                                                                        atggttataagaaacagactacAATCAACCCCAACAACTGCTGTTGGTTGCTCTTCCCCTCCCGTTTGACGAAAGCCAG‑CAAAAGAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGTaaaa                                                                                            <  1:835170/221‑1 (MQ=255)
                                                                                                                                          cgggtcctgcgaaGTACTACAAGAAAACCCATCAACTGCTGTTGGTGGCGTCGCCGCGCTCGTTGGGGCAAAGCCAG‑CAAAAAAAGCGGGAAGTGCCTTTTACCCGGCTGGGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCGTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGTAAAAAAg                                                                                         <  2:763737/227‑1 (MQ=255)
                                                                                                                                          cgcgcTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGTAAAAAAg                                                                                         <  1:73372/239‑1 (MQ=255)
                                                                                                                                          cgcgcTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGTAAAAAAg                                                                                         <  1:906179/239‑1 (MQ=255)
                                                                                                                                          cgcccTACGTTCAGTCCCACAAACCACCCCATCAACCGCCTGGGTTTTCTTTTCCTCTCCCGTTTGGAGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTCCCCTGCTGGGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGTAAAAAAg                                                                                         <  2:561073/239‑1 (MQ=255)
                                                                                                                                           gtgcTACTGTCAGTACTACAATCAACTCCAACAACTGCCGTTGGTTGCCTTTCCCCTCCCGTTTGACGAAAGCCAG‑GAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGTAAAAAAGt                                                                                        <  1:680058/237‑1 (MQ=255)
                                                                                                                                                cttttCAGTTCTACAATCAACTCCACCACCTGCCGTTGTTTGCTCTTCCTCTCCCGTTGGACGAAAGCAAG‑AAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGGGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGTAAAAAAGTTGtaa                                                                                   <  2:482708/235‑1 (MQ=255)
                                                                                                                                                 ttgtacttcttccAATAAACCCCACCAACTCCCGTTGGTTTCTTTTCCTCTCCCGTTTGACAAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTCCCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGTAAAAAAGTTGtaat                                                                                  <  2:432705/227‑1 (MQ=255)
                                                                                                                                                      aGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCCCAATAAAATGTAAAAAATTTGTAATAAGCt                                                                             >  1:469246/1‑239 (MQ=255)
                                                                                                                                                      aGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCAAATTTCACAATAAAATTAAAAAAAATTGaaaaaa                                                                                >  2:1054914/1‑236 (MQ=255)
                                                                                                                                                         actacAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGACTGGTATGAAACGCGACCCAATTTCACAATAAAATGAAAAAAAATTTGAAAAAACTTg                                                                           >  2:255246/1‑238 (MQ=255)
                                                                                                                                                         actacAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGTAAAAAAGTTGTAATAAGCTTg                                                                           >  2:977913/1‑238 (MQ=255)
                                                                                                                                                         actacAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGTAAAAAAGTTGTAATAAGCTTg                                                                           >  1:817062/1‑238 (MQ=255)
                                                                                                                                                           tacAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAATCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGAACCAATTTCCAAATAAAATGTAAAAAAGTTGTAATAAGCTTGTCt                                                                        >  1:382597/1‑239 (MQ=255)
                                                                                                                                                           tacAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGt                                                                                                                                                                                   >  1:980754/1‑133 (MQ=255)
                                                                                                                                                             cAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCCCAATAAAATTAAAAAAAATTTTAAAAAACTTTTTTGa                                                                      >  2:1226036/1‑239 (MQ=255)
                                                                                                                                                              aaTCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATACACGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGAAAAAAAGTTGTATTAAGCTTGTCTGa                                                                      >  1:772947/1‑238 (MQ=255)
                                                                                                                                                                 cAACCCCCTCAACGGCCTTGTGTTGCTCTTCCTCTCCCTTTTCAAAAAACCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTTGTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGTAAAAAAGTTGTAATAAGCTTGTCTGAATCg                                                                  <  2:1124964/239‑1 (MQ=255)
                                                                                                                                                                     tCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAAc                                                                                                                                                                         >  1:927900/1‑133 (MQ=255)
                                                                                                                                                                         tCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGAATGAAACGCGACCCAATTTCACAATAAAATGTAAAAAAGTTGTAAAAAGCTTGTCTGAATCGAACTTTTa                                                          >  2:660854/1‑239 (MQ=255)
                                                                                                                                                                          taaCTGCCGTTGGTTGCGTTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGTAAAAAAGTTGTAATAAGCTTGTCTGAATCGAACTTTTAg                                                         <  1:629605/238‑1 (MQ=255)
                                                                                                                                                                          caccTGCCGTTGGTTGCTCGTCCTCCCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCGTTTTCACCTGCGCTGGCATAAACGGAACCGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCCTTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGTAAAAAAGTTGTAATAAGCGTGTCTGAATCGAACTTTTAg                                                         <  1:1378518/236‑1 (MQ=255)
                                                                                                                                                                          caactgccttgtgtgtgttttCCTCTCCCTTTTG‑CGAAAAACAGACAAAAAAAGTGGGAGGTTCCTTTTCCCCGGTGGGGGCAAAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGTAAAAAAGTTGTAATAAGCTTGTCTGAATCGAACTTTTAg                                                         <  2:940229/220‑1 (MQ=255)
                                                                                                                                                                          cAACTGCCGTTGGTTGCTTTTCCTCCCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCCGGAAGTTCCTTTTCCCCTGCTTGGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGTAAAAAAGTTGTAATAAGCTTGTCTGAATCGAACTTTTAg                                                         <  1:968259/239‑1 (MQ=255)
                                                                                                                                                                           accgtccGTTGGTTTCTCTTCCTCTCCCGTTGGACGAAAGCCAG‑CAAAAAAGGTGGGAAGTTCCTTTTCCCCTGCTGGGGAAAAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGTAAAAAAGTTGTAATAAGCTTGTCTGAATCGAACTTTTAGc                                                        <  2:243481/234‑1 (MQ=255)
                                                                                                                                                                                ccttggttttcttttCCCCTCCCTTTTGCCGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTCCCCTGCTGGGGCAAAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGTAAAAAAGTTGTAATAAGCTTGTCTGAATCGAACTTTTAGCCGCt                                                    <  2:54319/225‑1 (MQ=255)
                                                                                                                                                                                  gttggtttCTCTTCCTCCTCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGGGGAATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGTAAAAAAGTTGTAATAAGCTTGTCTGAATCGAACTTTTAGCCGCttt                                                  <  1:255246/238‑1 (MQ=255)
                                                                                                                                                                                             ttCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGCAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGTAAAAAAGTTGTAATAAGCTTGTCTGAATCGAACTTTTAGCCGCTTTAGCCTGTCca                                        >  1:103001/1‑237 (MQ=255)
                                                                                                                                                                                              cccTCTCCCTTTTGACAAAAGCCAG‑CAAAAAAAGCGGGAAGTTCCTTTTCCCCTGCTGGGGCAAAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGTAAAAAAGTTGTAATAAGCTTGTCTGAATCGAACTTTTAGCCGCTTTAGTCTGTCcatca                                     <  2:60440/238‑1 (MQ=255)
                                                                                                                                                                                               ccccccccGTTTGACGAAACCCAA‑AAAAAAAAGCTGGAAGTTCCTTTTTCCCTGCTGGGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGTAAAAAAGTTGTAATAAGCTTGTCTGAATCGAACTTTTAGCCGCTTTAGTCTGTCcatcat                                    <  2:774121/234‑1 (MQ=255)
                                                                                                                                                                                                ctctCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTCCCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGTAAAAAAGTTGTAATAAGCTTGTCTGAATCGAACTTTTAGCCGCTTTAGTCTGTCCATCAtt                                   <  1:760284/239‑1 (MQ=255)
                                                                                                                                                                                                    cccGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCGGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGTAAAAAAGTTGTAATAAGCTTGTCTGAATCGAACTTTTAGCCGCTTTAGTCTGTCCATCATTCCAg                               <  1:770481/239‑1 (MQ=255)
                                                                                                                                                                                                            gcGAAAGCCAG‑CAAAAAAAGCTGGAAGTGCCTTTTACCCTTCTGTGGCATAAACTGAACAGCCATAATCCGAAGATCGTCTGGTTACGGTAAACCATTAAAAACCTTG‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGTAAAAAAGTTGTAATAAGTTTGTCTGAATCGAACTTTTAGCCGCTTTAGTCTGTCCATCATTCCAGTAAATGAt                       <  1:555374/238‑1 (MQ=255)
                                                                                                                                                                                                             cGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGTAAAAAAGTTGTAATAAGCTTGTCTGAATCGAACTTTTAGCCGCTTTAGTCTGTCCATCATTCCAGTAAATGAt                       <  1:46355/238‑1 (MQ=255)
                                                                                                                                                                                                             cGAAAGCCAG‑CAAAAAAAGCGGGAAGTTCCTTTTCCCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGTAAAAAAGTTGTAATAAGCTTGTCTGAATCGAACTTTTAGCCGCTTTAGTCTGTCCATCATTCCAGTAAATGAt                       <  1:1226066/238‑1 (MQ=255)
                                                                                                                                                                                                                aaGCCAG‑CAAAAAAAGGTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGTAAAAAAGTTGTAATAAGCTTGTCTGAATCGAACTTTTAGCCGCTTTAGTCTGTCCATCATTCCAGTAAATGATTAct                   <  1:867164/239‑1 (MQ=255)
                                                                                                                                                                                                                aaGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGGGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGTAAAAAAGTTGTAATAAGCTTGTCTGAATCGAACTTTTAGCCGCTTTAGTCTGTCCATCATTCCAGTAAATGATTa                     <  1:1147098/237‑1 (MQ=255)
                                                                                                                                                                                                                   ccAG‑CAAAAAAAGTGTGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGACCAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCAGTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGTAAAAAAGTTGTAATAAGCTTGTCTGAATCGAACTTTTAGCCGCTTTAGTCTGTCCATCATTCCAGTAAATGATTACTCtt                <  1:198374/239‑1 (MQ=255)
                                                                                                                                                                                                                                tcTGGGAGTTCCTTTTTCCTTTGTTGGGCAAAAACAGAACGCCCCTAAGCCGAAGTTCGGCTGGTTACGGGAAACCATTAAAATCCTTT‑ACTCGGCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGTAAAAAAGTTGTAATAAGCTTGTCTGAATCGAACTTTTAGCCGCTTTAGTCTGTCCATCATTCCAGTAAATGATTACTCTTGTATTCATAATg    <  2:1352207/238‑1 (MQ=255)
                                                                                                                                                                                                                                  tgggtgTTCTTTTTCCCTTGTTGGGGAAAAAACGAACCAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCAACCCAATTTCACAATAAAATGTAAAAAAGTTGTAATAAGCTTGTCTGAATCGAACTTTTAGCCGCTTTAGTCTGTCCATCATTCCAGTAAATGATTACTCTTGTATTCATAATg    <  2:719683/232‑1 (MQ=255)
                                                                                                                                                                                                                                  tGGAAGTTTTTTTTCCCTTTTTGTGGAAAAAACGGAACAGCCATAAGCCGAAAGTCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGAGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGTAAAAAAGTTGTAATAAGCTTGTCTGAATCGAACTTTTAGCCGCTTTAGTCTGTCCATCATTCCAGTAAATGATTACTCTTGTATTCATAATGGa  <  2:831050/239‑1 (MQ=255)
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                 
ACAGAGCGATACCTGGGCGCTGGACAATGTGTTACAGGAGCTGGGACGCGAACGCACGATTGCTATGAGCCTGCCGGAATTCGAGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCG‑CGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAG‑CAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTT‑ACGCGTCGATGGCATAACCGAATCGTATGAAACGCGACCCAATTTCACAATAAAATGTAAAAAAGTTGTAATAAGCTTGTCTGAATCGAACTTTTAGCCGCTTTAGTCTGTCCATCATTCCAGTAAATGATTACTCTTGTATTCATAATGGA  >  NC_000913/3893396‑3893858

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A