Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F27 I0 R1 322 127.1 2757226 91.8% 2531133 223.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,295,759 T→G 10.9% V427G (GTG→GGG)  gltP → glutamate/aspartate:proton symporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,295,7590TG10.9% 350.2 / 2.6 136V427G (GTG→GGG) gltPglutamate/aspartate:proton symporter
Reads supporting (aligned to +/- strand):  ref base T (48/65);  new base G (14/6);  total (65/71)
Fisher's exact test for biased strand distribution p-value = 2.89e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 136 total aligned reads displayed.

CCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTCTGGCGTTTATTGCTGGTGTTGACCGTATCCTCGACATGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTT‑AGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACA  >  NC_000913/4295528‑4295991
                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                          
ccTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTCTGGCGTTTATTGCTGGTGTTGACCGTATCCTCGACATGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGCGCTGGCGATT‑GCCAAGTGGGAACACAAAATTGACCGGAAGAAAGCGCTGGCTTATGAGGGTGACGGGCTGGGc                                                                                                                                                                                                                                     >  1:937520/1‑239 (MQ=255)
 cTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAGGGTCTGGCGTTTATTGCTGGTGTTGACCGTATCCTCGTCATGGCTCGTACTGCGCTGAA‑CGTGGGGGGTAATGCGCTGGCGGTGACGGGGATT‑GCCAAGTGGGGAAACAAAATTGACCGGAAAAAAGGGCTGGCTTATGGGAAGGAAGTGGTgggga                                                                                                                                                                                                                                    >  2:132809/1‑237 (MQ=255)
   cggaaGGGATGGGTGGCGGGCTTGGCGTGTCGTTTGGGGGTTTGCTGGCAACGGTGGGTAGCGTAGGTATTCCGGTGGAAGGTCTGGCGTTTATTGCTGGTGTTGACCGTTTCCTCGACATGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCaaa                                                                                                                                                                                                                                  <  1:616360/236‑1 (MQ=255)
   cGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTCTGGCGTTTATTGCTGGTGTTGACCGTATCCTCGACATGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGGGGTT‑GCCAAGGGGGAAACCAAATTTGACCGTAAGAAAGGGCGGGCTTTTAGGCGGGAAGGGCTGGGCaaa                                                                                                                                                                                                                                  >  1:766724/1‑239 (MQ=255)
              gCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTCTGGCGTTTATTGCTGGTGTTGACCGTATCCTCGACATGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAAGGGGGACACAAATTTTACCGGAAAAAAAGGCCGGCTTATGAGGGTGAAGAGGTGGGGAAATTTGTTaaa                                                                                                                                                                                                                         >  1:1230383/1‑237 (MQ=255)
              gCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTCTGGCGTTTATTGCTGGTGTTGACCGTATCCTCGACATGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGGGCTGGGGATT‑GCCAAGGGGGAACACAAATTTGACCGTAAAAAAAGGCGGGCTTATGGGCGTGAAAGGCTGGGCAAAttttgaaaaa                                                                                                                                                                                                                        >  1:490723/1‑231 (MQ=255)
                 ggCGTGCCTGGGGTGGCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGGTGGAAGGTCTGGCGTTTATTGCTGGTGTTGACCGTATCCTCGACATGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTg                                                                                                                                                                                                                     <  1:1091858/238‑1 (MQ=255)
                      ttcgtgggtttttttttTGGTTTTGTTGTGATCGCTGTGTTGCGTAGGTCTCCCCCGGGAAGGTCTGTGGTTTATTGCTGGTGTTTACCGTACCCTCGACATGGCGCGTTTTGTGCTGAA‑CGTGGTGTGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTGGTAACACAAATTTGACCGTAAGAAAGCTGTGGCTTATGATCGTGAAGTGCTGGGTAAATGTTATAAAACTGCGGATc                                                                                                                                                                                                               <  2:244177/226‑1 (MQ=255)
                      gcttgggatggcGTTTGTGGTGTGGCTGGAAACGGTGGGTAGGGTAGGTATGCCGCGGGAAGGTCTGGCGTTTATTGCTGGTGTTGACCGTATCCTCGACATGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATc                                                                                                                                                                                                               <  1:251089/228‑1 (MQ=255)
                       ccTGGCGTGTCGTTTGTTGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTCTGGCGTTTATTGCTGGTGTTGACCGTATCCTCGACATGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATc                                                                                                                                                                                                               <  1:201561/238‑1 (MQ=255)
                                  gTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTCTGGCGTTTATTGCTGGTGTTGACCGTATCCTCGACATGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGa                                                                                                                                                                                                   <  1:132809/239‑1 (MQ=255)
                                     tgtgGTGTTGGGGGCAACGGTGGGGTGGGTAGGTATTGCGGTGGAAGGTCTGGGGTTTATTGCTGGTGGTGACCGTTTCCTCGACATGGCGGGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTg                                                                                                                                                                                                <  2:414284/239‑1 (MQ=255)
                                      gtggtgTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTCTGGCGTTTATTGCTGGTGTTGACCGTATCCTCGACATGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGGGCGGGGGATT‑GCCAAGTGGGGACCCAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGGGGGAGATGCTGGGCAAATTTGTTAAAAATGGGGATCAATAATTGAAGATTGc                                                                                                                                                                                               >  1:1002319/1‑239 (MQ=255)
                                             ttcTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTTTGGCGTTTATTGCTGGTGTTGGCCGTATCCTCGACATGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGat                                                                                                                                                                                        <  1:688017/237‑1 (MQ=255)
                                               gtGGCAACGGTGGGTGGGGTGGGTTTTCCGCTGGAAGGTTTGGGGTTTTTTGCTGGTTTTGACCGTATCCTCGACATGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGatat                                                                                                                                                                                      <  2:538277/238‑1 (MQ=255)
                                                 gtccaCGTTGGGTTGCGTTGGTTTTCCGCTGGAAGGTGTGGCGTTTATTGCTGGTGTTGACCGTTGCCTCGACATGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATcc                                                                                                                                                                                    <  2:1210279/235‑1 (MQ=255)
                                                    aaCGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTCTGGCGTTTATTGCTGGTGTTGACCGTATCCTCGACATGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGGGCTGGTGATT‑TCCAAGTGGGGACACAAATTTGACCTGAAGAAAAGGCTGGCTTATGAGGGTGCAGGGCGCGGGAAATTTGATAAAAATACGGAATAATAATTGAGAATTGGCgggggaaatcacc                                                                                                                                                                                 >  2:756540/1‑230 (MQ=255)
                                                      cGCTGGGTAGCGTAGGTTTTCCGCTGGAAGGTCTGGCGTTTATTGCTGGTGTTGACCGTATCCTCGACATGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCggg                                                                                                                                                                                           <  1:125422/227‑1 (MQ=255)
                                                       gCTGGGTTGCGTTGGTTTTCCGGTGGAAGGTTTGGGTTTTATTGCTGGTGTTGACCGTATCCTCGACATGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCgg                                                                                                                                                                              <  2:491612/239‑1 (MQ=255)
                                                       gCTGGGTAGCGTAGGTATTCCGGTGGAAGGTCTGGCGTTTATTGCTGGTGTTGACCGTATCCTCGACATGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCgg                                                                                                                                                                              <  1:463338/239‑1 (MQ=255)
                                                        cTGGGTAGCGTAGGTATTCCGCTGGAAGGTCTGGCGTTTATTGCTGGTGTTGACCGTATCCTCGACATGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAAtt                                                                                                                                                                                                        <  1:937903/212‑1 (MQ=255)
                                                         tGGGTGGCGTATGTTTTCCGCTGGAAGGTCTGGCTTTTATTGCTGGTGTTGACCGGTTCCTCGACATGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGAGGTGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCa                                                                                                                                                                            <  2:1037189/239‑1 (MQ=255)
                                                                cGTAGGTATTCCGCTGGAAGGTCTGGCGTTTATTGCTGGTGTTGACCGTATCCTCGACATGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCaa                                                                                                                                                                                                             <  1:919097/199‑1 (MQ=255)
                                                                cGTAGGTATTCCGCTGGAAGGTCTGGCGTTTATTGCTGGTGTTGACCGTATCCTCGACATGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGGGATT‑GCCAAGTGGGAACACAAATTTGACCGGAAGAAAGCGCTGGCTTTTGAGCGGGAAGGGCTGGGCAAATTTTATAAAAATGCGGATCAAAAATTGAAGATTGCCGGGGATAACCaac                                                                                                                                                                                 >  2:125422/1‑225 (MQ=255)
                                                                 gtgggTTTTCCGGTGGAGGGGCTGGCTTTTAGTGGTGGTGTGGGCCGTATCCTCGACATTGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGa                                                                                                                                                                    <  2:1093970/236‑1 (MQ=255)
                                                                  ttcgttttcctgtgtaaGGTTTGGGGTTTATTGCTGGTTTTGACCGTATCCGCGACATGGGTCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGGGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGAGTGCCGGGGATATCCACCCGGCAATGTGTGa                                                                                                                                                                    <  2:1285877/223‑1 (MQ=255)
                                                                                     tCTGGCGTTTATTGCTGGTGTTGACCGTATCCTCGACATGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAACGCTGGCTTTTTAGCGGGAAAGGCTGGGGCAATTTGATAAAAATTCGGGTCAAAAATTTAAGATTGCCGGGGAATTCCACCCGGCAAAGGGTGAAGGCCtttggggggcgttgc                                                                                                                                                >  2:1243977/1‑225 (MQ=255)
                                                                                      ttGGCGTTTATTGGTGGTGTTGCCCGTATCCTCGACATGGCGCGTACTGCGCTGAACCGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGc                                                                                                                                               <  1:1219880/238‑1 (MQ=255)
                                                                                      cTGGCGTTTATTGCTGGTGTTGACCGTATCCTCGACATGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGc                                                                                                                                               <  1:965092/238‑1 (MQ=255)
                                                                                       tGGCGTTTATTGCTGGTGTTGACCGTATCCTCGACATGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGGGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAAAGCCTGATGGGACC‑CTTGcc                                                                                                                                              >  1:659898/1‑238 (MQ=255)
                                                                                               aTTGCTGGTGTTGACCGTATCCTCGACATGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGAGCTGGGCAAATTTGGTAAAACTGCGGATCAATAATTTAAGATTGCCGGGGATATCCACCCGGCAATGTTGGAAAGCCGGAttgggacctttccgcgcctctt                                                                                                                                      >  1:1103007/1‑218 (MQ=255)
                                                                                               aTTGCTGGTGTTGACCGTATCCTCGACATGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGGGATT‑GCCAAGTGGGGACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGGAGAGCTGGGGAAAATTGATAAAAATGCGGATCAAAAAATTAAAATTTACGGGGACTACCACCCGGCAATGGGGAAATCCCTACAGGGACC‑CTTGCcggccttcac                                                                                                                                     >  2:509658/1‑231 (MQ=255)
                                                                                                    tGGTTTTGACCGTTTCCTGGAAGTGGCGCGTTCTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGGTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGc                                                                                                                                <  2:659898/239‑1 (MQ=255)
                                                                                                    tGGTGTTGACCGTATCCTCGACATGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGc                                                                                                                                <  1:918931/239‑1 (MQ=255)
                                                                                                     ggTGTTGGCCGTATCCGCGACATGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGGCG‑CTTGCCGCGTCTTATCAGGc                                                                                                                                <  1:812502/238‑1 (MQ=255)
                                                                                                     ggTGTTGACCGTATCCTCGACATGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGc                                                                                                                                <  1:341479/238‑1 (MQ=255)
                                                                                                     ggTGTTGACCGTATCCACGACATGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGc                                                                                                                                <  1:1139601/238‑1 (MQ=255)
                                                                                                          ttcccggttCCGCGACCTGGCGGGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTTGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACg                                                                                                                           <  1:849463/230‑1 (MQ=255)
                                                                                                                tttCCTCGACTTGGCGCTTCTTGGGCTTAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACa                                                                                                                    <  2:677613/237‑1 (MQ=255)
                                                                                                                 tcccTCGGCATGGGGGGTCTTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTGGGAACCCAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACa                                                                                                                    <  2:83923/236‑1 (MQ=255)
                                                                                                                 aTCCTCGACATGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTTAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCCTATGGGGCC‑CTTTCCCCGTCTTTTCAAGCCCAcccccaaccg                                                                                                                   >  1:666040/1‑233 (MQ=255)
                                                                                                                 aTCCCCGACATGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATCGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACa                                                                                                                    <  1:223799/238‑1 (MQ=255)
                                                                                                                      cGACATGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCCCCCGGCAAAGTGTGAATGCCTGATGGCGCG‑CTTGCCGCGTCTTATCAGGCCTACCCCAGACCgcgcca                                                                                                              >  1:83923/1‑237 (MQ=255)
                                                                                                                          aTGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGc                                                                                                          <  1:71928/239‑1 (MQ=255)
                                                                                                                                    tccgccctggagggggttgGTAATTTGCGGGCGGTGGTGGTGATT‑TCCAAGTTCGATGGCAAATTTGTCCGTAAGAAAGCGGTTGCCTATCAGCGTGAAGTGCTGGGCAAATTTGATAAAAAGGTGTACCACTAATTGCAGCTTGCCGGCGATATCTGTCCGGTCATGGGGGAAGTCCTGTCGCGGAC‑CTTGTCGCGTCTTATCTGGTCTGTGCCAGACATCGCAATAGCCTGTTTT‑Ag                                                                                                <  2:341548/225‑1 (MQ=255)
                                                                                                                                       cgcTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAgcgcctgcctcttttaccactc                                                                                              >  1:441101/1‑220 (MQ=255)
                                                                                                                                         tttttaaggaacaggTAAGGCGGGGGGGGTGGTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGGTTATGAGCGGGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTT‑AGCGTGa                                                                                           <  2:659639/226‑1 (MQ=38)
                                                                                                                                                  ggtggGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTGGGAACACCAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGCAGTGCTGGGCAAATTTGATAAAACTGCGGGTCAATAATTGAAGATTTCCGGGGATATCCACCCGGCAATGTGGGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATAAGGCCTACGCCCAGCACGGCACTAGCCTGATTTAAGCG‑GATTTTTTAgg                                                                                  >  2:1169808/1‑239 (MQ=255)
                                                                                                                                                  ggtggGTAATGCGCTGGCGGTGCTGGGGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCGGGCTTATGAGCGTGAAGGGCTGGGCAAATTTGGTAAAACTGCGGATCAATAATTGAAGATTGCCCGGGAGATCCACCCGGCCATGGGTGAATGCCTGATGCGACG‑CTTGCCGCGGCTTATCAGGCCTACGCCCGACAGCGCGATAGCCGGGttttcgggggttttttagg                                                                                   >  2:21216/1‑223 (MQ=255)
                                                                                                                                                   gtggGTAATGGGGTGGGGGTGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTT‑AGCGTGATTTTGTAgg                                                                                  <  2:529985/238‑1 (MQ=255)
                                                                                                                                                   gtggGTAATGCGCTGGCGGTGCTGGGGATT‑GCCAAGTGGGAACACAAATTTTACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGGTAATGCCTGATGCGAAG‑CTTTCCGCGTCTTATCAGGCCTACGCCCGACAGCGCAATAACCTGATTT‑TGCGGGATTTTTTAgtt                                                                                 >  2:840545/1‑237 (MQ=255)
                                                                                                                                                   gtggGTAAGTCGGTGGCGGTGCTGGTTATT‑GCCAAGTGGGAACAAAATTTTGACCGTAAGAAAGCGCTTGCTTATGAGCGTGAAGTGCTGGGCAAATTTTATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTT‑AGCGTGATTTTGTAgg                                                                                  <  2:356104/238‑1 (MQ=38)
                                                                                                                                                    tggGTAATGCGGTGGCGTTGCTTGGTATT‑GCCAAGGGGGAACACAACTTGGACCGTAAGAAAGCGCTGGCTTAGGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCTCCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTT‑AGCGTGATTTTGTAGGt                                                                                 <  1:46618/238‑1 (MQ=37)
                                                                                                                                                        tAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGc                                                                                                                                <  1:1034522/188‑1 (MQ=255)
                                                                                                                                                           tGCGCTGGCGGTGCTGGGGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGGTTGAATGCCTGATGCGGCG‑CTTGCCGCGTCTTTACAGGCCTACGCCAGCCCACGCAATAGCCTGATTT‑AGCCTGATTTTTTTAGTCGGGTAAg                                                                         >  1:209994/1‑239 (MQ=255)
                                                                                                                                                                  gCGGTGCTGGTGATT‑GCCCAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCCTGGCCGCG‑CTTTTCAGGCCTACCCCACCACGCGCAATAGCCCGCTTT‑AACCGGTTTTTTTTGGGCGGAAAAgggaggta                                                                  >  2:765154/1‑233 (MQ=255)
                                                                                                                                                                  gCGGTGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAAAAGCCCGATTT‑AGCGTGATTTTTTAGGTCGGGTAAGGGGTTTa                                                                  >  1:845868/1‑239 (MQ=255)
                                                                                                                                                                  gCGGTGCTGGTGATT‑GCCAAGTGGGAAAACAAATTTGACCGTAAGAAAGAGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAAATGCGGATCAATAATTGAAGATTGCCGGGGAGATCCACCCGGCAATGTGTGAATGCCGGATGCGCAG‑CTTGCCCGGCCTTTTCCAGGCTAGCCCAGACAGGGCACCAACCCGATTT‑AGGGCGTTTTTGTTGGAGGGGTAAAGGGTTTa                                                                  >  2:1102857/1‑239 (MQ=255)
                                                                                                                                                                      tgttgggtttt‑GCCAAGTGGGAAAAACAATTTTACCGTAAGAAAGCGCTGGGTTATGAGCGGGAAGTGCTGGGCAAATTTGATAAAACTGGGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTT‑AGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGc                                                               <  2:890470/229‑1 (MQ=25)
                                                                                                                                                                       tgtGGTGATTGGCCAAG‑GGGCACACAAATTTGACCGTAAGAAAGAGCTGGCTTATGAGCGTGAAGGGCTGGGCAAATTTGATAAAACTGCGGATCTATAATTGAAGATTGCCGGGGAAATCCAACCGGCAATGTGTGCATGCCCAATCGGCAG‑CTTGCCGCGTCTTTTCACGCCGTCTCCAGACAGCCGAAGAACCTGATTT‑TTCGTGATTTTGTGGGGCGGAAAAAGGGTTTAttct                                                              >  2:1147678/3‑235 (MQ=255)
                                                                                                                                                                            tGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTT‑AGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATcc                                                        >  1:294771/1‑239 (MQ=255)
                                                                                                                                                                             gATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGGGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTT‑AGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATcc                                                        <  1:994153/238‑1 (MQ=255)
                                                                                                                                                                              aTT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCGGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTT‑AGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCg                                                       <  1:1169808/238‑1 (MQ=255)
                                                                                                                                                                                t‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTg                                                                                                                                                                                                                     <  1:1355821/80‑1 (MQ=255)
                                                                                                                                                                                t‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTg                                                                                                                                                                                                                     >  2:1355821/1‑80 (MQ=255)
                                                                                                                                                                                t‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTT‑AGCGTGATTTTGTAGGCCGGATAAGGCGTTTATGCCGCATCCGCCa                                                    >  1:792360/1‑239 (MQ=255)
                                                                                                                                                                                   ccAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGc                                                                                                          <  1:264732/184‑1 (MQ=255)
                                                                                                                                                                                        tGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTCCGCCAGACAGGGCAATACGCTGATTT‑AGCGTGATTTTTGATGTCGGATAAGTCGGTTTCGCCGCACCCGACATCAACg                                              >  2:501910/1‑238 (MQ=37)
                                                                                                                                                                                          ggAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGCCAGCGCAATAGCCTGATTT‑ACCGTGATTTTTTAGGTCGGTTAAGGCGTTTATGCCGccacctaacacaaca                                              >  2:1320174/1‑222 (MQ=37)
                                                                                                                                                                                           gAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACACCAGACACCGCAATAGCCTGATTT‑AGCGTGATTTTTTAGTGCGGATAAGGCGGTTATGCCCCGTACGCCATCAAACCCTg                                          >  2:299916/1‑239 (MQ=37)
                                                                                                                                                                                            aaCACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGCTTT‑AGCGTGATTTTGTAGGTCGGCTAAGGGGTTTATTCCCCATCCGCCATCAAACCCTgt                                         >  2:487089/1‑238 (MQ=37)
                                                                                                                                                                                                  aagttGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCaa                                                                                                              <  1:1366695/162‑1 (MQ=255)
                                                                                                                                                                                                  aaTTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCaa                                                                                                              >  2:1366695/1‑165 (MQ=255)
                                                                                                                                                                                                         ccGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTT‑AGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTaa                             <  1:487089/238‑1 (MQ=255)
                                                                                                                                                                                                         ccGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTT‑AGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTaa                             <  1:1223080/238‑1 (MQ=255)
                                                                                                                                                                                                           gTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTT‑AGCGGGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGCCATAAACACCTGATGCGACCCTTaaagg                          >  2:431411/1‑236 (MQ=255)
                                                                                                                                                                                                             aaGAAAGCGGTGGCTTGGTGGGGTGAAGGTTGGGGTAAATTTGATAAAACTGCGGAACAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAGTGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTT‑AGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGt                        <  2:55569/239‑1 (MQ=18)
                                                                                                                                                                                                             aaGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTT‑AGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGt                        <  2:294771/239‑1 (MQ=255)
                                                                                                                                                                                                                  aGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTT‑AGCGTGATTTTGTAGGCCGGATAAGGCGTTTATGCCGCATCCGCCACCAACGCCTGATGCGAGGCTTAACGCGCCTTa                    >  1:560659/1‑238 (MQ=255)
                                                                                                                                                                                                                     gcTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTT‑AGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCTTGATGCGACGCTTACCTCGTCTTATCa                 >  1:1243168/1‑238 (MQ=255)
                                                                                                                                                                                                                      cTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTT‑AGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAg                >  1:483471/1‑238 (MQ=255)
                                                                                                                                                                                                                      cTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTT‑AGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAg                >  1:332037/1‑238 (MQ=255)
                                                                                                                                                                                                                       ttgttttttggCGTGAATGGCTGGGCAAATTTGAGAAAACTGAGGAACAATAATTGAAGATTGCCGGGGATATCCCACCGGCAATGTGGGAATGCCTGATGCGACG‑CTTGCCGCGGCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTT‑AGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGc              <  2:666040/229‑1 (MQ=18)
                                                                                                                                                                                                                       ttgctttttgaggttaaGTGCTGGGAAAATTTGAAAAAACTGCGGATAAATTATTGAAGGTTGCCGGGGATATCCACCCGGCAATGGGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTT‑AGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGc              <  2:332037/224‑1 (MQ=18)
                                                                                                                                                                                                                       tGGTTTATGAGGGTGAAGTGCTGGGCAAATTTGAAAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATACCCACCCGGCAATGTGGGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTT‑AGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGc              <  2:209994/239‑1 (MQ=255)
                                                                                                                                                                                                                       tGGCTTATGAGCGTTAAGTGCGTGGCAAATTTGATAAACCTGCGGATTAATAATTGAAGATTGCCGGTGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTT‑AGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGc              <  1:499996/239‑1 (MQ=255)
                                                                                                                                                                                                                       tGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGc                                                                                                                                <  2:931195/126‑1 (MQ=255)
                                                                                                                                                                                                                       tGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGc                                                                                                                                >  1:931195/1‑126 (MQ=255)
                                                                                                                                                                                                                       tGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTT‑AGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGc              <  1:31742/239‑1 (MQ=255)
                                                                                                                                                                                                                        ggCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTT‑AGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGc              <  1:366997/238‑1 (MQ=255)
                                                                                                                                                                                                                                   gTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGat                                                                                                                                                                                        <  2:67052/59‑1 (MQ=255)
                                                                                                                                                                                                                                   gTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTT‑AGCg                                                                                              >  2:1369050/1‑147 (MQ=255)
                                                                                                                                                                                                                                   gTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTT‑AGCg                                                                                              <  1:1369050/147‑1 (MQ=255)
                                                                                                                                                                                                                                   gTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTT‑AGCGTGATTTTGTAGTTCGGATAAGGCGTTTATGCCCCATCCGCCATCAACGCCTGATGCGACGCTTAACGGGCTTTTCCAGGCCTCCGCCaaccc  >  2:934314/1‑235 (MQ=21)
                                                                                                                                                                                                                                   gTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTT‑AGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCCGAcc  >  1:1042113/1‑238 (MQ=255)
                                                                                                                                                                                                                                   gTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTT‑AGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACa  >  1:985679/1‑239 (MQ=255)
                                                                                                                                                                                                                                   gTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTT‑AGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACa  >  1:723911/1‑239 (MQ=255)
                                                                                                                                                                                                                                   gTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTT‑AGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACa  >  1:1338655/1‑239 (MQ=255)
                                                                                                                                                                                                                                   gTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTT‑AGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACCCCTGATGCGACCCTTACCGCGCCTTATAAGGccacacccagaca  >  2:73781/1‑228 (MQ=21)
                                                                                                                                                                                                                                    tGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTT‑AGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGCCCTACCCCAGACa  >  1:367404/1‑238 (MQ=255)
                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                          
CCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTCTGGCGTTTATTGCTGGTGTTGACCGTATCCTCGACATGGCGCGTACTGCGCTGAA‑CGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATT‑GCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACG‑CTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTT‑AGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACA  >  NC_000913/4295528‑4295991

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A