Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F27 I0 R1 322 127.1 2757226 91.8% 2531133 223.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,399,653 A→G 10.3% E134G (GAG→GGG)  miaA → delta(2)‑isopentenylpyrophosphate tRNA‑adenosine transferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,399,6530AG10.3% 342.5 / 2.8 135E134G (GAG→GGG) miaAdelta(2)‑isopentenylpyrophosphate tRNA‑adenosine transferase
Reads supporting (aligned to +/- strand):  ref base A (48/69);  new base G (9/7);  total (58/77)
Fisher's exact test for biased strand distribution p-value = 2.88e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 139 total aligned reads displayed.

ACGCTGAAGAGTTACTCGCCGCGCCGCACCGATTGCTGGATATTCGCGATCCGTCGCAGGCTTACTCGGCTGCTGATTTTCGCCGCGATGCGCTGGCGGAAATGGCCGATATCACCGCGGCGGGGCGGATCCCACTGTTAGTGGGCGGTACGATGTTGTA‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCA  >  NC_000913/4399425‑4399887
                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                            
accttgaagtttttcccgccgccccgCCCCGGTTGCTGGATATTCGGGATCCGGCGCAGGCTTCCCCGGCTGCTGATTTTCGCCGCGATGCGCTGGCGGAAATGGCCGATATCACCGCGGCGGGGCGGATCCCACTGTTAGTGGGCGGTACGATGTTGTA‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAggcg                                                                                                                                                                                                                                    <  2:70292/223‑1 (MQ=255)
 cggtaaaggtttACCCGCCGCGCCGCACGTGTTGCGGGAATTTCGCAGTCGTGGGCAGGCTTACTCTGCTGCTTATTTTCGCCGGGAGGGGCTGGCGGAAATGGCCGATATCACCGCGGCGGGGCGGATCCCACTGGTAGTGGGCGGTACGATGTTGTA‑TTTCGAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAggcgg                                                                                                                                                                                                                                   <  2:837130/229‑1 (MQ=255)
   gtaaaaagTTCCTCGCCGGCCCGCACCGATTGCTGGATATTCGCGATCCGGCGCAGGCTTACTCGGCTGCTGATTTTCGCCGCGATGCGCTGGCGGAAATGGCCGATATCACCGCGGCGGGGCGGATCCCACTGTTAGTGGGCGGTACGATGTTGTA‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCa                                                                                                                                                                                                                                 <  1:76960/233‑1 (MQ=255)
    tGAAGAGTTACTCGCCGCGCCGCACCGATTGCTGGATATTCGCGATCCGTCGCAGGCTTACTCGGCTGCTGATTTTCGCCGCGATGCGCTGGCGGAAATGGCCGATATCACCGCGGCGGGGCGGATCCCACTGTTAGTGGGCGGTACGATGTTGTA‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGGACGGGCCAGAATTGAGCAACAGGCGGCag                                                                                                                                                                                                                                >  1:387693/1‑239 (MQ=255)
        gcttttcccgccgggccgCCCCGGTTGCTGGATTTTCGCGATCCGTCGGAGGCTTACTCGGCTGGTGATTTTCGCCGCGATGCGCGGGCGGAAATGGCCGATATCACCGCGGCGGGGCGGATCCCACTGTTAGTGGGCGGTACGATGTTGTA‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGc                                                                                                                                                                                                                            <  2:1345491/230‑1 (MQ=255)
           ttACTCGCCGCGCCGCACCGATTGCTGGATATTCGCGATCCGTCGCAGGCTTACTCGGCTGCTGATTTTCGCCGCGATGCGCTGGCGGAAATGGCCGATATCACCGCGGCGGGGCGGATCCCCCTGTTAGTGGGCGGTCAGATGTTGTA‑TTTTAAGGCCTGGCTGGAAGGGGTGTGGCCGCTACCGTCGGCGGACCCCGAGGAACGGGCCCGAATTGAGGAACGAGGGGCGG‑AGAAAgg                                                                                                                                                                                                                        >  2:686063/1‑239 (MQ=255)
           ttACTCGCCGCGCCGCACCGATTGCTGGATATTCGCGATCCGTCGCAGGCTTACTCGGCTGCTGATTTTCGCCGCGATGCGCTGGCGGAAATGGCCGATATCACCGCGGCGGGGCGGATCCCACTGTTAGTGGGCGGTACGATGTTGTA‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGGCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACCAGCGGCAG‑AGCAAgg                                                                                                                                                                                                                        >  1:1005810/1‑239 (MQ=255)
              cTCGCCGCGCCGCACCGATTGCTGGATATTCGCGATCCGTCGCAGGCTTACTCGGCTGCTGATTTTCGCCGCGATGCGCTGGCGGAAATGGCCGATATCACCGCGGCGGGGCGGATCCCACTGTTAGTGGGCGGTACGATGTTGTA‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTg                                                                                                                                                                                                                     >  1:819191/1‑239 (MQ=255)
                   cgcgccgcACCGATTGCTGGATATTCGCGATCCGTCGCAGGCTTACTCGGCTGCTGATTTTCGCCGCGATGCGCTGGCGGAAATGGCCGATATCACCGCGGCGGGGCGGATCCCACTGTTAGTGGGCGGTACGATGTTGTA‑TTTCAAGGCCTTGCTGGCAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGCAGGACGGGCCAGAATTGGGGAACCAGCGGCAG‑AGCAAGGGTGGGGGt                                                                                                                                                                                                                >  2:798345/1‑239 (MQ=255)
                   cgcgccgcACCGATTGCTGGATATTCGCGATCCGTCGCAGGCTTACTCGGCTGCTGATTTTCGCCGCGATGCGCTGGCGGAAATGGCCGATATCACCGCGGCGGGGCGGATCCCACTGTTAGTGGGCGGTACGATGTTGTA‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCCACCGTCGGCAGACCCGGAAGTACGGGCCGGGATTTAGCAACAGGCGGCCG‑AGCAAGGTTggggg                                                                                                                                                                                                                 >  1:752895/1‑236 (MQ=255)
                                 ttctggtttttcgcatcccGTCGGAGGATTACGCGGCTGCGGATTTTCGCCGCGATGCGCTGGCGGAAATGGCCGATATCTCCGCGGCGGGGCGGATCCCACTGTTAGTGGGCGGTACGATGTTGTA‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCaa                                                                                                                                                                                                  <  2:24810/222‑1 (MQ=255)
                                        tatTCGCGATCCGTCGCAGGCTTACTCGGCTGCTGATTTTCGCCGCGATGCGCTGGCGGAAATGGCCGATATCACCGCGGCGGGGCGGATCCCACTGTTAGGGGGCGGTACGATGTTGTA‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGGCGACCCGGAAGTACGGGCCGAAATTGGGCACAAAGCGGCAA‑AGCAAGGTAGGGGGTCAATGACACGTCAAATTCcgg                                                                                                                                                                                           >  2:595867/1‑239 (MQ=255)
                                                     tCGCAGGCTTACTCGGCTGCTGATTTTCGCCGCGATGCGCTGGCGGAAATGGCCGATATCACCGCGGCGGGGCGGATCCCCCGGTTAGTGGGCGGTACGATGTTGTA‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGGGACAAAGGGGGCAG‑AGGACAGGGGGGAGTCAATGCATCGGCCAATTCAAGAGGGAAAACCGGt                                                                                                                                                                              >  2:1137541/1‑239 (MQ=255)
                                                     tCGCAGGCTTACTCGGCTGCTGATTTTCGCCGCGATGCGCTGGCGGAAATGGCCGATATCACCGCGGCGGAGCGGATCCCAATGTTAGTGGGCGGTACGATGTTGTA‑TTTCAAGGCATTGCTGGCAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGACGTACGGGCCAGAATTGGGCAACAGGGGGCAG‑AGCAAGGATGGGGGTCCTTGAATCTGCAACtcacggcggaagtaccggg                                                                                                                                                                              >  2:543051/1‑221 (MQ=255)
                                                              tACTCGGCTGTTGGTTTTCGCCGCGATGTGCTGGGGGAAATGGCCGTTAGCCCCGCGGCGGGGCGGATCCCACTGTTAGGGGGCGGTACGATGTTGTA‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGTAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGgcagc                                                                                                                                                                     <  2:532599/239‑1 (MQ=255)
                                                               aCTCGGCTGCTGATTTTCGCCGCGATGCGCTGGCGGAAATGGCCGATATCACCGCGGCGGGGCGGATCCCACTGTTAGTGGGCGGTACGATGTTGTA‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGgcagca                                                                                                                                                                    <  1:1336541/239‑1 (MQ=255)
                                                                    gttgctgGTTTTCGCCGGGGTGGGCTGGGGGAAAGGGCCGATATCCCCGCGGCGGGGCGGGTCCCACGGTTAGTGGGCGGTACGATGTTGTA‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGAt                                                                                                                                                               <  2:1321334/237‑1 (MQ=255)
                                                                     ctgctgATTTTCGCCGCGATGCGCTGGCGGAAATGGCCGATATCACCGCGGCGGGGGGGATCCCAATGTTATGGGGAGGACCGATGTTGAA‑TTTTAAGGCCTTGTTGGAGGGGTTGTCGCCGCGACGGTCGGGAGCCCCCGCAGGACCGGCCAGATATGGACAACATCGGGCAGTGGCCAGGGTGGG‑GGCATATCACCGTCAACTTGACGGGGGAGATCCgctagggggagccggggt                                                                                                                                                               >  2:1308692/1‑221 (MQ=255)
                                                                                cgccgcGATGCGGTGGCGGAAAGGGCCGATAGCACCGCGGCGGGGCGGATCCCTCTTTTAGTGGGCGGTACGATGTTGGA‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGa                                                                                                                                                   <  1:686063/239‑1 (MQ=255)
                                                                                      gATGCGCTGGCGGAAATGGCCGATATCCCCGCGGCGGGGCGGATCCCACTGTTAGTGGGCGGTACGATGTTGGA‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCcac                                                                                                                                              <  1:688947/238‑1 (MQ=255)
                                                                                       aTGCGGTGGCGGAAATGGCCGATATCACCGCGGCGGGGCGGATCCCACTGTTAGTGGGCGGTACGATGTTGTA‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCcaca                                                                                                                                             <  1:1100322/238‑1 (MQ=255)
                                                                                        ggggcTGGTGGAAATGGGCGATGTCCCCGGGGCGGGGCGGACCCCATTTGTAGTTGGCGGTACGATGTTGGA‑ATTCAAGGCATTGCTGGAAGGGTTGTCGCCGCCACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACaa                                                                                                                                            <  2:513142/235‑1 (MQ=255)
                                                                                           gttGGCGGAAAGGGCCGATATCCCCGCGGCGGGGCGGATCCCACTGTTAGTGGGCGGTCCGATGGTGTA‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAgg                                                                                                                                         <  2:1005810/236‑1 (MQ=255)
                                                                                                          cGATATCCCCGCGGCGGGGCGGATCCCGCTGTTAGTGGGCGGTACGATGTTGTA‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCAGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTg                                                                                                                          <  2:570473/238‑1 (MQ=255)
                                                                                                                   cgggggggggcggATCCCACTGTTAGTGGGGGGTTCGATGTTGGA‑TTTCAAGGCATTGCTGGAAGGGTTGCCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGtttttt                                                                                                                <  2:1209353/233‑1 (MQ=255)
                                                                                                                       gcggggcggATCCCACTGTTAGTGGGCGGTACGATGTTGTA‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGGGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGGAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCCGGCCCTGGAAGGTTTTTTTAt                                                                                                            >  1:1209353/1‑239 (MQ=255)
                                                                                                                        aaggaccgttCCCACTGTTGGTGGGCGGTACGATGTGTTA‑TTTCAAGGCATTGCTGGAAGGGTTGGCCCCTCTACCGTCGGCAGGCCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCAtt                                                                                                           <  2:939079/230‑1 (MQ=255)
                                                                                                                         gtggcggtcctcagggTTGGTGGGTGGTTCGATTGTGTA‑TTGCAGGGGTTTGCGGGAGGGGTTGTCGCCGCTACCGGCGGCAGACCAGGAAGTACGGGTCAGAAGTGAGAAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATGCATCCAAAGGATCCACAAAGGCTGTCCCGGGCACTGGAAGTTTTTTTCAtgt                                                                                                          <  2:1011403/224‑3 (MQ=255)
                                                                                                                           ggcggATCCCACTGTTAGTGGGCGGTACGATGTTGTA‑TTTCAAGGCATTGCTGGGAGGGTTGTCGCCGCTACCGTCGGCCGACCCGGCAGGACGGGCCAGAATTTGGCACCAGGCGGCAG‑AGCAAGGGTGGGAGTAATTGCATCGTCAACTTCAGGAGGGAGATCCGGTTGGGGCAGCAAGGGTTCACCCAAATCGTCACCAAAAGCTTTCCCGGGCCACGGAGGGTTTTTTCAttttg                                                                                                        >  2:1258460/1‑237 (MQ=255)
                                                                                                                             cggATCCCACTGTTAGTGGGCGGTACGATGTTGTA‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCCAGGTTGGGAGTCATTGCATCGCCAACTTCAGGGGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCCCAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTTATTTCggg                                                                                                      >  2:252755/1‑239 (MQ=255)
                                                                                                                               gttCCCATTTTTGGGGGGCGGTACGATTTTTTA‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑a                                                                                                   <  2:440083/237‑1 (MQ=255)
                                                                                                                                aTCCCATTTTTGGTGGGCGGTCCGATGGTGTA‑TTTCAAGGAATTGGTGGAAGGGTTGCCGCCGCTACCGGCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑a                                                                                                   <  2:1112230/238‑1 (MQ=255)
                                                                                                                                   cgaggttttgtgggtggTACGGTG‑TGTATTTTCAAGGAATGGCGGGAAGGGTTGTCGCCGCTACCGTCGGCAGGCCAGTAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGAGCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAAc                                                                                               <  2:1191927/230‑1 (MQ=255)
                                                                                                                                         ttAGTGGGCGGTACGATGTTGTA‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGTAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTaaa                                                                                         >  1:871409/1‑238 (MQ=255)
                                                                                                                                           aGTGGGCGGTACGATGTTGTA‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCCCAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑aaaa                                                                                                >  1:939079/1‑230 (MQ=255)
                                                                                                                                             ggggCGGTCCGATTTTTTA‑TTTCAAGGTGTTGGTAGCAGGGTTGGCGCCGCTGCCGTCGGCAGCCCCGGAAGGACGGGCCAGAATTGGGCAACGGGCGGGAG‑AGGAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGaa                                                                                     <  2:1004060/238‑1 (MQ=255)
                                                                                                                                                 cGGTACGATGTTGTA‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGATGGGAGTCATTGCATCGTAAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATCCATCCAAATGATCCAAAAAGCCTTTCCCGGGCCCTGGAAGTTTTTTTCATTTCTGGA‑AAAACTTTAACGGAAATgc                                                                                 >  2:686341/1‑238 (MQ=255)
                                                                                                                                                   gTACGATGTTGTA‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCaaa                                                                                                                                                      >  1:347938/1‑169 (MQ=255)
                                                                                                                                                   gTACGATGTTGTA‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGAc                                                                                >  1:32203/1‑238 (MQ=255)
                                                                                                                                                   gTACGATGTTGTA‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACg                                                                               >  2:493630/1‑239 (MQ=255)
                                                                                                                                                   gTACGATGTTGTA‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGG‑AAAAATTTAACGGAACTGagg                                                                               >  2:670493/1‑237 (MQ=255)
                                                                                                                                                   gTACGATGTTGTA‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGCATTCATCCAAATGATCCACAAAGGGTTTCCCGGGCACTGGAAGGTTTTTTCATTTGGGGTAAAAATTTTAACGG‑ACTGACg                                                                               >  2:747990/1‑239 (MQ=255)
                                                                                                                                                   gTACGATGTTGGA‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCaaa                                                                                                                                                      <  2:347938/169‑1 (MQ=255)
                                                                                                                                                    tACGATGTTGTA‑TTTCAAGGCATTGCTGGAAGGGTTGGCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACg                                                                               <  1:747990/238‑1 (MQ=255)
                                                                                                                                                     catgttttgtA‑TTTCAAGGGATTGCTGGGAGGGTTGGCGCCGTTACCGGCGGCAGGACCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCa                                                                             <  2:771926/233‑1 (MQ=255)
                                                                                                                                                      cggtgttgcA‑TTTCAAGGCATTGCTGGAAGGGTTGTTGCCGCTACCGTCGGCAGATCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCaa                                                                            <  1:1168105/236‑1 (MQ=255)
                                                                                                                                                        aTGTGGTA‑TTTCAAGGCATTGCAGGAATGGTTGGCGCCGCTACCGTCGGCAGACCCGGAAGTACCGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCaa                                                                            <  1:368216/237‑1 (MQ=255)
                                                                                                                                                              tA‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGAtt                                                                                                                                                              <  2:1089944/150‑1 (MQ=255)
                                                                                                                                                              tA‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCCCAAAGGCCTTACCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTACCGGAACTGACGCaaagataagg                                                                    >  2:653676/1‑232 (MQ=255)
                                                                                                                                                              tA‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAgg                                                                    >  1:779268/1‑239 (MQ=255)
                                                                                                                                                               a‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGga                                                                   <  1:334492/239‑1 (MQ=255)
                                                                                                                                                                 tttCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAGGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGgag                                                                  <  1:252755/239‑1 (MQ=255)
                                                                                                                                                                 ttgcAAGGCATTGCTGGAAGGGTTGTCGCCGCTCCCGTCGGCAGGCCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGgag                                                                  <  1:573083/236‑1 (MQ=255)
                                                                                                                                                                  ttCAAGGCATTGCTGGAAGGGTTGTCGCACCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGgaga                                                                 <  1:714224/239‑1 (MQ=255)
                                                                                                                                                                    cAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAGTGATTCATCCAAATCATCCCCAAAGGCTTTCCCGGGGCCTGGAAGTTTTTTTCATTTCGGGT‑AAAAATTTAAGGGAACCGACGAAAAAGGCAGgggaaa                                                               >  2:1263035/1‑237 (MQ=255)
                                                                                                                                                                    cAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCCTCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGACCTGACGCAAACGGCaaggaag                                                                >  2:1366107/1‑232 (MQ=255)
                                                                                                                                                                    cAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGCACTGACGCAAACGTCAGGAGAc                                                                >  1:908813/1‑238 (MQ=255)
                                                                                                                                                                    cAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGGAGAc                                                                >  1:1271772/1‑238 (MQ=255)
                                                                                                                                                                    cAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGGAGACg                                                               <  1:268610/239‑1 (MQ=255)
                                                                                                                                                                     aaGGGATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGGCCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGc                                                              <  1:1091302/239‑1 (MQ=255)
                                                                                                                                                                     aaGGAATTGCTGGAAGGGTTGTCCCCGCTACCGTGGGAAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGCAACTGACGCAAACGTCAGGAGACGc                                                              <  1:1117899/239‑1 (MQ=255)
                                                                                                                                                                      aggcatgtcctgAAGGGTTGTAGCCGGTACCGGCGGCAGACCGGGAAGTTCGGGCCAGAATTGAGCAACAGGTGGGAG‑AGCAAGGTTGGGAGTCATTGCAGCGTCAACTTCAGTAGGTAGATCCGGTTGCGGCAGCAATGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGct                                                             <  1:1361702/228‑1 (MQ=255)
                                                                                                                                                                      aGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCACGGATTCATCCAAATGATCCACAAAGGGTTTCCCGGGCACTGGAAGATTTTTTCATTTCGGGG‑AAAACTTTAACGGAAcgaccgacaaagacagaaacgg                                                               >  2:714224/1‑216 (MQ=255)
                                                                                                                                                                      aGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTAATCCAAATGATCCACAAAGGCTTTCCCGGGCCCTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACCGCCGGAAACGTCAGGAGACGc                                                              >  2:1272394/1‑238 (MQ=255)
                                                                                                                                                                      aGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGATGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCTCGGGCACTGGGAGTTTTTTTCCTTTCGGGT‑AAAACTTTAACGGAAATGACGCAAACGTCAGGacaccg                                                              >  1:1269568/1‑236 (MQ=255)
                                                                                                                                                                         cATTGGTGGAAGGGTTTTCGCCGCTACGTTCGGCGGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGAAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGctct                                                           <  2:31435/238‑1 (MQ=255)
                                                                                                                                                                         cATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCCCAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGccct                                                           >  1:384031/1‑238 (MQ=255)
                                                                                                                                                                         cATTGCGGGAAGGTTTGTCGCCGCTCCCGGCGGCAGACCGGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGctct                                                           <  2:316412/238‑1 (MQ=255)
                                                                                                                                                                         cATTGCGGGAAGGGTTGTCCCCGTTACCGGCGGGAGACCCGGAATTACGGGCCAAAATTGAGCAACAGGGGGCAG‑AGCAAGGTTGGGGGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGctct                                                           <  2:1130052/238‑1 (MQ=255)
                                                                                                                                                                           ttGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCa                                                                             >  1:122649/1‑218 (MQ=255)
                                                                                                                                                                            tGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCg                                                       >  1:540160/1‑239 (MQ=255)
                                                                                                                                                                                ggAGGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGAAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATc                                                   <  2:135890/239‑1 (MQ=255)
                                                                                                                                                                                ggAAGGGTTTTGCCCTCTACCGCGGGCAGACCCGGAAGTACGGGCCAGAATTGAGAAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATc                                                   <  2:387693/239‑1 (MQ=255)
                                                                                                                                                                                ggAAGGGTTGTCGGCGCTACCGGCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATc                                                   <  1:1366107/239‑1 (MQ=255)
                                                                                                                                                                                 gAAGGGGTGGCGCCGCTACCGGCGGCAGACCCGGAAGTACGGGCCAGAATTGGGCAACAGGCGGCAG‑GGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATc                                                   <  1:880233/238‑1 (MQ=255)
                                                                                                                                                                                  aaGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAg                                                 >  1:316412/1‑239 (MQ=255)
                                                                                                                                                                                   aGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGACCTGACCAAAACGCCAgggaaaccccaacgctataagg                                                >  1:1325288/1‑219 (MQ=255)
                                                                                                                                                                                   aGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCCCTACCGTATCAgg                                                >  2:311608/1‑239 (MQ=255)
                                                                                                                                                                                      gTTGTCGCCCCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCCGCAG‑AGCAAGGTTGGGCGTCATTGCATCGTCCACTTCAGGAGGTAGATCCGGTTGCGGCCGCAAGGCTTCATCCAAATTATCCACAAAGGCTGTCCCGGGCCCTGGACGTTTTTTTCATTTCGGGG‑AAACCTTTAACGGAACTCACGCCAAAGCCCGGAAACGCACTCCCGTATCAGGtca                                             >  2:366848/1‑237 (MQ=255)
                                                                                                                                                                                       ttttCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGACCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGc                                             <  1:595867/235‑1 (MQ=255)
                                                                                                                                                                                        tGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTTTACCGTATCAGGTGGAt                                           >  1:1168996/1‑239 (MQ=255)
                                                                                                                                                                                        tGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCAt                                           <  1:670493/239‑1 (MQ=255)
                                                                                                                                                                                        tGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGG‑AAAACTTTAACGGAACTGACGAAAACGTCAGGAGAAGCTCTACCGTATCAGGTGCa                                            >  1:254106/1‑238 (MQ=255)
                                                                                                                                                                                        tGTCGCCCCTCCCGGCGGCAGCCCCGGAAGTACGGGCCAGAATTGAGCAACAGGGGGAAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCAt                                           <  2:819191/239‑1 (MQ=255)
                                                                                                                                                                                         gTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTAAGTAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCCTTCCCGGGCACTGGAAGGTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGCCGCCAAAGTACGGCAACGCCTTACCCTAACAGGTGCATc                                          >  2:921249/1‑239 (MQ=255)
                                                                                                                                                                                              cgcTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGATTCATTGCATTGGTAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGtt                                      <  1:686341/238‑1 (MQ=255)
                                                                                                                                                                                                        ggCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGATGGGAGTCATTGCATCGTCAACTTCAGGAGGTAAATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGTGT‑AAAACTTTAACGGAACTGACGCAAACGTCATGAGACGCTCTACCGTATAACGTGCACCAGTTGGcacacgcc                            >  1:1064579/1‑231 (MQ=255)
                                                                                                                                                                                                             gcccGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑GGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGc                       <  1:50581/237‑1 (MQ=255)
                                                                                                                                                                                                             aCCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCg                      >  1:1201340/1‑239 (MQ=255)
                                                                                                                                                                                                              cccGGAAGGCCGGGCCAGAATTGAGCAACGGGCGGGAG‑ACCAGGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTCTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGc                       <  2:540160/237‑1 (MQ=255)
                                                                                                                                                                                                               ccGGGAGTTCGGGCCAGAAGTGGGCAACAGGGGGAAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGc                       <  2:752895/236‑1 (MQ=255)
                                                                                                                                                                                                                 ggAAGTACGGGCCAGAATGGCGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGcc                  <  1:653676/239‑1 (MQ=255)
                                                                                                                                                                                                                  gAAGTGCGGGCCAGAATTGAGCAACAGGCGGCAG‑ATCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTa                                                     <  1:1303288/203‑1 (MQ=255)
                                                                                                                                                                                                                       gcgggcgcaaaTTGGGCAACAGGCGGGAG‑AGCAAGGTGGGGAGTCCTGCGATCGTCAACTGCAGGGGGTAGACCCGGTTGCGGCAGCAAGGATTCATCCAAATGAGCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGaa             <  2:125636/229‑1 (MQ=255)
                                                                                                                                                                                                                           gCCAGAATTGAGCATCAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCa                                 <  1:471600/214‑1 (MQ=255)
                                                                                                                                                                                                                                aaTTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCCCTACCGTATCAGGTGCATAAGTTCGCCAACGCCCCGGCGAGCCGGGAACAGCCCCaaa   >  2:1302387/1‑237 (MQ=255)
                                                                                                                                                                                                                                 aTTGAGAAACGGGCGGCAG‑GTCAAGGTTGGGGGTTATTGAATCGTCAACTGCAGGAGGTAGCTCCGGTTGCGGCAGAAAGGATTCATCCAAATGATCCACAAAGGCTTCCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCa  <  2:1325288/239‑1 (MQ=255)
                                                                                                                                                                                                                                     aGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTa                                                     >  1:1072987/1‑184 (MQ=255)
                                                                                                                                                                                                                                     aGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTa                                                     <  2:1072987/184‑1 (MQ=255)
                                                                                                                                                                                                                                     aGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGcc                            >  1:600213/1‑209 (MQ=255)
                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                            
ACGCTGAAGAGTTACTCGCCGCGCCGCACCGATTGCTGGATATTCGCGATCCGTCGCAGGCTTACTCGGCTGCTGATTTTCGCCGCGATGCGCTGGCGGAAATGGCCGATATCACCGCGGCGGGGCGGATCCCACTGTTAGTGGGCGGTACGATGTTGTA‑TTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAG‑AGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGT‑AAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCA  >  NC_000913/4399425‑4399887

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A