Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F27 I0 R1 120 139.6 2835800 98.5% 2793263 226.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,812,803 T→G 13.1% V25G (GTG→GGG)  dfp → fused 4'‑phosphopantothenoylcysteine decarboxylase/phosphopantothenoylcysteine synthetase, FMN‑binding

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,812,8030TG13.1% 253.8 / 3.8 98V25G (GTG→GGG) dfpfused 4'‑phosphopantothenoylcysteine decarboxylase/phosphopantothenoylcysteine synthetase, FMN‑binding
Reads supporting (aligned to +/- strand):  ref base T (19/62);  new base G (13/2);  total (33/65)
Fisher's exact test for biased strand distribution p-value = 5.59e-06
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 102 total aligned reads displayed.

TGTGGTGCTCGCATCCTGTCATAGCCGTTTCGTTAAATCGACGGCCAGTTTTCAATCCTGGAAAGCGCCTCGCAAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCTATGGGCCATATTGAGCTGGGTAAATGGGCTGATTTAGTGATTCTCGCCCCTGCCACGGCAGATTTGATTGCCCGTGTTGCTGCCGGAATGGCGAA  >  NC_000913/3812571‑3813040
                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                  
tgtgGTGCTCGCATCCTGTCATAGCCGTTTCGTTAAATCGACGGCCAGTTTTCAATCCTGGAAAGCGCCTCGCAAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGGTGCCTGT‑AAAAACCCCGCAC‑TTGTGcgtcg                                                                                                                                                                                                                                              >  2:1069237/1‑239 (MQ=255)
  tggtgCTCGCATCCTGTCATAGCCGTTTCGTTAAATCGACGGCCAGTTTTCAATCCTGGAAAGCGCCTCGCAAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTTCTGCCTAT‑AAAACACCTCAAA‑TCGTGcgtggtg                                                                                                                                                                                                                                            >  1:1134300/1‑238 (MQ=255)
    gtgCTCGCATCCTGTCATAGCCGTTTCGTTAAATCGACGGCCAGTTTTCAATCCTGGAAAGCGCCTCGCAAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTTCTTCCTAT‑AAAAACCCTCACC‑TGGGGGGGCGtttt                                                                                                                                                                                                                                          >  1:257125/1‑238 (MQ=255)
    gtgCTCGCATCCTGTCATAGCCGTTTCGTTAAATCGACGGCCAGTTTTCAATCCTGGAAAGCGCCTCGCAAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTCGCCAT‑AAAAACCCTGAAC‑TGGGGGGTCGtgtg                                                                                                                                                                                                                                          >  2:110867/1‑239 (MQ=255)
       cTCGCATCCTGTCATAGCCGTTTCGTTAAATCGACGGCCAGTTTTCAATCCTGGAAAGCGCCTCGCAAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCCAT‑AAAAACCCTCAACACGGTG‑GTCGTTTgtgc                                                                                                                                                                                                                                       >  2:1314613/1‑239 (MQ=255)
       cTCGCATCCTGTCATAGCCGTTTCGTTAAATCGACGGCCAGTTTTCAATCCTGGAAAGCGCCTCGCAAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTAATTCTGCCTTT‑AAAAACCCCTAAC‑TGGTGcctcctgttccc                                                                                                                                                                                                                                       >  1:337631/1‑231 (MQ=255)
       cTCGCATCCTGTCATAGCCGTTTCGTTAAATCGACGGCCAGTTTTCAATCCTGGAAAGCGCCTCGCAAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGCATTTGTTCCCTT‑AAAAACCCTGCAC‑TGGTGCGTCGTTTgcgc                                                                                                                                                                                                                                       >  1:1237874/1‑239 (MQ=255)
       cTCGCATCCTGTCATAGCCGTTTCGTTAAATCGACGGCCAGTTTTCAATCCTGGAAAGCGCCTCGCAAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCAGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTgcgc                                                                                                                                                                                                                                       >  2:1001984/1‑239 (MQ=255)
            aTCCTGTCATAGCCGTTTCGTTAAATCGACGGCCAGTTTTCAATCCTGGAAAGCGCCTCGCAAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCGGCCTAT‑TAAAACACTGAAC‑TTGAACGTCGTTTGCGCGATc                                                                                                                                                                                                                                   >  1:256366/1‑238 (MQ=255)
                   cATAGCCGTTTCGTTAAATCGACGGCCAGTTTTCAATCCTGGAAAGCGCCTCGCAAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGcc                                                                                                                                                                                                                           <  2:1072744/239‑1 (MQ=255)
                    aTAGCCGTTTCGTTAAATCGACGGCCAGTTTTCAATCCTGGAAAGCGCCTCGCAAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTTCTGCCTAT‑AAAAACCCCGAAC‑TTGGGCGGCGTTTTTGCGCTCGCGGGGCCg                                                                                                                                                                                                                          >  2:547821/1‑239 (MQ=255)
                     tAGCCGTTTCGTTAAATCGACGGCCAGTTTTCAATCCTGGAAAGCGCCTCGCAAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGa                                                                                                                                                                                                                         <  1:438202/239‑1 (MQ=255)
                      aGCCGTTTCGTTAAATCGACGGCCAGTTTTCAATCCTGGAAAGCGCCTCGCAAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGa                                                                                                                                                                                                                         >  1:986196/1‑238 (MQ=255)
                      aGCCGTTTCGTTAAATCGACGGCCAGTTTTCAATCCTGGAAAGCGCCTCGCAAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCCTT‑AAAAACCCCGTAC‑TGGTGCGGCGGTTGCGCGGTCGGCGGGCCCAc                                                                                                                                                                                                                        >  1:528756/1‑239 (MQ=255)
                      aGCCGTTTCGTTAAATCGACGGCCAGTTTTCAATCCTGGAAAGCGCCTCGCAAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCGGCCTAT‑AAAAACCCCGAAC‑CGGGGGGGCGGTTGTGCGGTGGCGGGGGCgcc                                                                                                                                                                                                                        >  2:254644/1‑237 (MQ=255)
                         cGTTTCGTTAAATCGACGGCCAGTTTTCAATCCTGGAAAGCGCCTCGCAAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑g                                                                                                                                                                                                                      <  1:1264218/237‑1 (MQ=255)
                            ttCGTTAAATCGACGGCCAGTTTTCAATCCTGGAAAGCGCCTCGCAAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGGATTGGTGCCCAT‑AAAAAACCTTGAC‑AGGGGCGTCGTTTGTGCGACCTCGGGGGCGAC‑GGCcg                                                                                                                                                                                                                  >  1:1033285/1‑238 (MQ=255)
                            ttCGTTAAATCGACGGCCAGTTTTCAATCCTGGAAAGCGCCTCGCAAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGAATTTCTTCCTCT‑AAAAACCCCGAAC‑TGGGGCGGCGGTTGGGCGCTCCCGGGGGCGAC‑CTCcg                                                                                                                                                                                                                  >  2:701582/1‑238 (MQ=255)
                             tCGTTAAATCGACGGCCAGTTTTCAATCCTGGAAAGCGCCTCGCAAAGTGAATCTCAGTTGAAGGCACGACAACAAAAGTATTGTGATAAAAGCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCcgcg                                                                                                                                                                                                                <  1:616120/239‑1 (MQ=255)
                             tCGTTAAAGCGACGGCCAGTTTTCAATCCGGGAAAGCGCCTCGCAAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAAGCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCcgcg                                                                                                                                                                                                                <  2:1083944/239‑1 (MQ=255)
                                 tAAATCGACGGCCAGTTTTCAATCCTGGAAAGCGCCTCGCAAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGc                                                                                                                                                                                                            <  1:1052886/239‑1 (MQ=255)
                                        aCGGCCAGTTTTCAATCCTGGAAAGCGCCTCGCAAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTTTTGCCTAT‑AAAAACCCTGTAA‑CGGTGCGTCGTTTGTGCGGGTGCGGGGCCGAC‑GCCCCCGCAGCCATGGcc                                                                                                                                                                                                     >  1:1378509/1‑239 (MQ=255)
                                             cAGTTTTCAATCCTGGAAAGCGCCTCGCAAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAg                                                                                                                                                                                                 <  1:834781/238‑1 (MQ=255)
                                                  ttCAATCCTGGAAAGCGCCTCGCAAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTGGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCaa                                                                                                                                                                                         <  2:878031/239‑1 (MQ=255)
                                                  tgcAATCCTGGAAAGCGCCTCGCAAAGTGAATCTCAGCTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCaa                                                                                                                                                                                         <  1:183196/237‑1 (MQ=255)
                                                      aTCCTGGAAAGCGCCTCGCAAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGc                                                                                                                                                                                     <  2:498475/239‑1 (MQ=255)
                                                          tGGAAAGCGCCTCGCAAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGGATTTCTGCCTAT‑AAAAACCCCGGAC‑TGGTGCGGCGTTTTGGCGATCGCGGGGCCGCC‑GCCCCCGTAGCCACGACCGCAG‑C‑GGCAAAAACCttt                                                                                                                                                                                 >  1:1003720/1‑239 (MQ=255)
                                                              aaGCGCCTCGCAAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATcg                                                                                                                                                                             <  1:3829/239‑2 (MQ=255)
                                                              aaGCGCCTCGCAAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCa                                                                                                                                                                             <  1:1136169/239‑1 (MQ=255)
                                                               aGCGCCTCGCAAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCAc                                                                                                                                                                            <  2:917971/239‑1 (MQ=255)
                                                               aGCGCCTCGCAAAGTGAATCGCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCAc                                                                                                                                                                            <  2:839050/239‑1 (MQ=255)
                                                                 cgcCTCGCAAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTTCTGCCCATAAAAACCCCTAACC‑TGGGGGGCGGTTTG‑GCGGGTGCGGGGCCGGCGGCCCGCGT‑GCAAAAACCGCAG‑C‑GGGACAAACCTTTTTTAcc                                                                                                                                                                           >  2:1277557/1‑238 (MQ=255)
                                                                 cgcCTCGCAAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGTTTCCTAT‑AAAAACCCCGCAC‑CCGGGGGTCGTTTGTGCGATCGCGGGGCCGGC‑GTCCGCGGAGCCCCTGCCGAAA‑C‑GGCAAAAACCCTTTTCAcc                                                                                                                                                                           >  2:1156348/1‑238 (MQ=255)
                                                                     tCGCAAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACt                                                                                                                                                                      <  2:206653/239‑1 (MQ=255)
                                                                      cGCAAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTTT‑AAAACCCCTGAAC‑CAGTGCGGCCGTTGCGCGGTCGCGGGGGCGGA‑GTCCCCACAGCCACGAACCAAG‑G‑GGGAAAAGCACCTCTCAccccccct                                                                                                                                                                     >  1:515401/1‑235 (MQ=255)
                                                                      cGCAAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAAACCCTGAAC‑TGGGGCGTCGTTTGGGCGACCGGGGGGCCCGC‑GTCCGCGTAGCCCTGACCGGAG‑C‑GGCAACAGCCTTTTTTACCCCCCtt                                                                                                                                                                     >  1:185042/1‑239 (MQ=255)
                                                                         aaaGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAg                                                                                                                                                                   <  1:1069237/238‑1 (MQ=255)
                                                                                aTCGCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAgg                                                                                                                                                          <  2:528819/239‑1 (MQ=255)
                                                                                     aGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCCAT‑AAAAACCCCTAAC‑TGGTGGGGCGTTTGCGCGGTCGCGGGGGCGCC‑GGCCCCGGGGGCATGACCCGAG‑CGGGCAAAACCCTTT‑TCACCCCCCTCAGCCTG‑CAGGC‑gggg                                                                                                                                                    >  2:767150/1‑237 (MQ=255)
                                                                                       gTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGGATTTCTGCCTCT‑AAAAAACCCCAAA‑TTGGGCGGCCTTTTCGCGCTCACGGGGGCCAC‑GTCCCCCTAGCCATGACCGAAGTC‑GGGAAAGACCTTTTTCCCCCCCCtatccgggcggcggtgtg                                                                                                                                                     >  2:729402/1‑222 (MQ=255)
                                                                                        tGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGtt                                                                                                                                                    <  2:147078/236‑1 (MQ=255)
                                                                                        tGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTc                                                                                                                                                  <  1:1277557/238‑1 (MQ=255)
                                                                                        tGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTc                                                                                                                                                  <  1:254644/238‑1 (MQ=255)
                                                                                         gAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTTTTGCCCAT‑AAAAACCCTGAAA‑TGGGGCGTCGTTTGCGCGGTCGCGGGGGCCAC‑GACCGCGCAGACCTGACCGAAG‑C‑GGGAAAAACCTTTTTCTCCCCCCCTAACTTG‑AAGGC‑gggga                                                                                                                                                   >  2:288216/1‑233 (MQ=255)
                                                                                               aCGACAACAAGAGTAATGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACGTAGCTTG‑CAGGC‑GGTTTCTGGTTATc                                                                                                                                          <  2:62665/239‑1 (MQ=255)
                                                                                               aCGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATc                                                                                                                                          <  1:286786/239‑1 (MQ=255)
                                                                                               aCGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATc                                                                                                                                          <  1:1155194/239‑1 (MQ=255)
                                                                                                      caaAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTc                                                                                                                                   <  1:441257/239‑1 (MQ=255)
                                                                                                       aaaaGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCaa                                                                                                                                                                                         <  1:1115569/186‑1 (MQ=255)
                                                                                                             aTTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCGGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACa                                                                                                                              <  2:827498/237‑1 (MQ=255)
                                                                                                             aTTGTGATAAAATCGCCAACTTCTGGGGTCCCCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACa                                                                                                                              <  1:1241656/237‑1 (MQ=255)
                                                                                                                gtgATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTctg                                                                                                                         <  1:609049/239‑1 (MQ=255)
                                                                                                                   aTAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCCTT‑AAAACCCCCCTAA‑CGGTGCGTGGCTTTCGCCGTCGCGGGGCCCAC‑CCCCGCGTAGCCATGACCGACG‑A‑GGCAAAAGCCGTTCTCAACCCCCCTAGCTTG‑CACGC‑GGCGTCTCGTTTTTCCCTTTCCgtacgcccc                                                                                                                         >  2:559190/1‑228 (MQ=255)
                                                                                                                      aaaTCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAAAACCCGAAC‑TGGTGCGTCGTTTGCGCGGTGGCGGGGCCGCC‑GCCCCCCGAGCCATGACCGGAG‑G‑GGCCAAAGCCTTTTTCCCCCCCCCTAGCTTT‑CAGGCGGGTTTTTGGTTTTCCCCTTTcctccgacttcctcg                                                                                                                     >  2:583871/1‑225 (MQ=255)
                                                                                                                          cGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTGAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCgg                                                                                                               <  1:417679/239‑1 (MQ=255)
                                                                                                                                   cTGGTGTGACCCTACAGAAAAAATCATTATGAGCCTGGCCGGTAAAAAAAGCGTTCGCGGCGTTGGCGGCGGTATGGCTGTGTAT‑AAAACCCCTGAAC‑TGGTGCGTCGGTTGCGCGATCGTGGGGCCGAC‑GTCCGCGTAGCCATGCCCGAAG‑C‑GGCTAAAGCTTTTATCACCCCTCTTAGCGTG‑CATGC‑GGTTTCTGGTTATCCCGTTCCCGACAGTCTGCTGGACCCGGCAGCCGAAg                                                                                                      <  2:870422/239‑1 (MQ=255)
                                                                                                                                   cTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAg                                                                                                      <  2:986196/239‑1 (MQ=255)
                                                                                                                                        gtCACCCTACAGTAAAAATCATCATGAGCCTGGCCGTTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCt                                                                                                 <  1:501280/239‑1 (MQ=255)
                                                                                                                                        gtCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCt                                                                                                 <  1:767150/239‑1 (MQ=255)
                                                                                                                                        gtCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCt                                                                                                 <  1:170512/239‑1 (MQ=255)
                                                                                                                                        gtCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCt                                                                                                 <  1:592871/239‑1 (MQ=255)
                                                                                                                                        gtCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCAGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCt                                                                                                 <  1:1001984/239‑1 (MQ=255)
                                                                                                                                        gtCACCCAACAGGAAAAATCATCATGAGCCGGGCCGGTAAAAAAATCGTTCGCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGGGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCGCCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCt                                                                                                 <  2:1254752/239‑1 (MQ=255)
                                                                                                                                         tCACCCTACAGGAAAAATCATCATGAGCCTGGCCTGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCt                                                                                                 <  1:1267624/238‑1 (MQ=255)
                                                                                                                                         tCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCt                                                                                                 <  1:357669/238‑1 (MQ=255)
                                                                                                                                          cACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATGGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGTGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTGCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCTAt                                                                                               <  1:453148/239‑1 (MQ=255)
                                                                                                                                          cACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCTAt                                                                                               <  2:92668/239‑1 (MQ=255)
                                                                                                                                           aCCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTTT‑AAAAACCCTGAAC‑TGGGGCGGCGTTTGCGCGATAGCGGGGGGCAC‑GTCCGCGCAGCCACGGCCGGAG‑C‑GGCAAAAGCCCTTTTAACCCCCCTTTGCTTGTCAGCG‑GGGTGTTGTGTATCCGCTTTCCGACCGCCTCCGGGACCCGCGGGCCGAAGCGGcacg                                                                                               >  2:508629/1‑236 (MQ=255)
                                                                                                                                             ccaccAGAAAAAACAATCACAAGCCTGGCGGATAAAAAATTCGTCTTCGGCGTTGGCGGCGGATTCGCGGCCTAT‑AAACCCCCTGAAC‑TGGGGCGCCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGGCCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCCTG‑CAGGC‑GGTTTCTGGTTATCCCGATTCCGACAGTCTGCTGGACCCCGCAGCCGAAGCCGCTATggg                                                                                            <  2:323539/235‑1 (MQ=255)
                                                                                                                                             ccTACAGGAAAAATCATCATGAGCCTGGCGGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGCATGGCTGCCTAG‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCGGAC‑GTCAGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCTATggg                                                                                            <  2:837767/239‑1 (MQ=255)
                                                                                                                                             ccTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCTATggg                                                                                            <  1:1156348/239‑1 (MQ=255)
                                                                                                                                             ccTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCTATggg                                                                                            <  1:701582/239‑1 (MQ=255)
                                                                                                                                               tACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCTATGGGcc                                                                                          <  1:221843/239‑1 (MQ=255)
                                                                                                                                                       aaaaCATCATGACCGTGTCCGGAAAAAAAAGCGTTCGCGTCTGAAGTGGAGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGAGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCGGCGTAGCCATGGCCGAAG‑C‑AGCAAAAGCCTTTATCTCCCCACCTAGCGTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGAAAGTCTGCTGGACCCGGCAGCCGAAGCCGCTATGGGCCATATTGAg                                                                                  <  2:256366/239‑1 (MQ=255)
                                                                                                                                                       aaaTCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCTATGGGCCATATTGAg                                                                                  <  1:583871/239‑1 (MQ=255)
                                                                                                                                                          tcatcaTGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCaa                                                                                                                                                                                         <  1:1293290/135‑1 (MQ=255)
                                                                                                                                                              catGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCa                                                                                                                                                                                          <  1:164343/130‑1 (MQ=255)
                                                                                                                                                                    ccTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCTATGGGCCATATTGAGCTg                                                                               <  1:792410/229‑1 (MQ=255)
                                                                                                                                                                     cTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCTATGGGCCATATTGAGCTGGGTAAATggg                                                                     <  1:110867/238‑1 (MQ=255)
                                                                                                                                                                     cTGGCCGGTAAAAAAATCGTTCGCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCTATGGGCCATATTGAGCTGGGTAAATggg                                                                     <  2:303707/238‑1 (MQ=255)
                                                                                                                                                                     cTGGCCGGTAAAAAAATCGTGCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCTATGGGCCATATTGAGCTGGGTAAATggg                                                                     <  1:948071/238‑1 (MQ=255)
                                                                                                                                                                             tAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAgg                                                                                                                                                          <  1:352348/146‑1 (MQ=255)
                                                                                                                                                                                        gctcgggtgttgacgtctgTATTGCAGCCTAA‑AAATCCCCTAACC‑GGGTGGGTCGTTTGGTAGATCGCGGGGCCGCC‑ATCCCCGTAGCCCTGACCGAAG‑C‑GGCAAAAGCCTTTATCCCCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCTATGGGCCATATTGAGCTGGGTAAATGGGCTGATTTAGTGATTCTCGcc                                                 <  2:844444/221‑1 (MQ=255)
                                                                                                                                                                                         tctcGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCTATGGGCCATATTGAGCTGGGTAAATGGGCTGATTTAGTGATTCTCGcc                                                 <  1:547821/238‑1 (MQ=255)
                                                                                                                                                                                             ggCGTTAGCGGCGGTATTGCTGCCTAT‑AAACCCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCTATGGGCCATATTGAGCTGGGTAAATGGGCTGATTTAGTGATTCTCGCCCCTGc                                            <  2:1378509/239‑1 (MQ=255)
                                                                                                                                                                                                  tAGGGGCGGTATGGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGGTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCTATGGGCCATATTGAGCTGGGTAAATGGGCTGATTTAGTGATTCTCGCCCCTGCCACg                                        <  2:257125/238‑1 (MQ=255)
                                                                                                                                                                                                  tAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCTATGGGCCATATTGAGCTGGGTAAATGGGCTGATTTAGTGATTCTCGCCCCTGCCACg                                        <  1:987747/238‑1 (MQ=255)
                                                                                                                                                                                                         ggTATTGCTGCCTAT‑AAAAACCCTGAAC‑TGGTGCGGCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTCGCCATGACCGAAG‑C‑GGCGAAAGCCTTTATCACCCCCCTTAGCTTG‑CAGGCGGGTTTTTGGTTTTCCCG‑TTCCCACCGTCTGCCGGGCCCGGCGGCCGGAGGCGCCATTGGGCCTTTTGTGATGGGGAAAAGGGGTGGTTTTTTGATTCTTCCGCCTGcccccggcgcgtt                                >  2:163170/1‑228 (MQ=255)
                                                                                                                                                                                                            aTTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCTATGGGCCATATTGAGCTGGGTAAATGGGCTGATTTAGTGATTCTCGCCCCTGCCACGGCAGATTTGAt                             <  1:508629/239‑1 (MQ=255)
                                                                                                                                                                                                                     tat‑aAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCTATGGGCCATATTGAGCTGGGTAAATGGGCTGATTTAGTGATTCTCGCCCCTGCCACGGCAGATTTGATTGCCCgtgt                    >  1:908182/1‑239 (MQ=255)
                                                                                                                                                                                                                     tat‑aAAACCCCTGAAC‑TGGTGCGGCGTTTGCGCGATCGCGTGGCCGGC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCTATGGGCCATATTGAGCTGGGTAAATggg                                                                     <  1:574743/190‑1 (MQ=255)
                                                                                                                                                                                                                         aaaaCCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCTATGGGCCATATTGAGCTGGGTAAATGGGCTGATTTAGTGATTCTCGCCCCTGCCACGGCAGATTTGATTGCCCGTGTtgc                 <  1:1314613/239‑1 (MQ=255)
                                                                                                                                                                                                                                cTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATTCCGTTTCCGTCAGTCTGCTGGACCCGGCAGCCGAAGCCGCTATGGGCCATATTTAGCTGGGTAAATGGGCTGATTTAGGGATTCTCGCCCCTGCCCCGGCAGATTTTGTTGCCCGTGTTGTGGCCGGa          >  1:1015137/1‑239 (MQ=255)
                                                                                                                                                                                                                                cTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGGCCCGGCAGCCGAAGCCGCTATGGGCCATATTGAGCTGGGTAAATGGGCTGATTTAGTGATTCTCGCCCCCGCCACGGCCGATTTGATTGCCCGTGTTGGTGCCGGa          >  1:506294/1‑239 (MQ=255)
                                                                                                                                                                                                                                        ggTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCTATGGGCCATATTGAGCTGGGTAAATGGGCTGATTTAGTGATTCTCGCCCCTGCCACGGCAGATTTGATTGCCCGTGTTGCTGCCGGAATGGCGa   <  1:540703/239‑1 (MQ=255)
                                                                                                                                                                                                                                         gTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCCGCCGAAGCCGCTATGGGCCATATTGAGCTGGGGAAATGGGCTGATTTAGTGATTCTCGCCCCTGCCACGGCCGATTTGATTGCCCGGGTTGCTGCCGGACTGGCGaa  >  2:929204/1‑239 (MQ=255)
                                                                                                                                                                                                                                          tGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCTATGGGCCATATTGAGCTGGGTAAATGGGCTGATTTAGTGATTCTCGCCCCTGCCACGGCAGATTTGATTGCCCGTGTTGCTGCCGGAATGGCGaa  <  1:288216/238‑1 (MQ=255)
                                                                                                                                                                                                                                          tGCGTCGTTGGCGCGAGCGGGGGGCGGAC‑GGCCGCGGAGCCATGGCCAAAG‑C‑GGCAAAAGCCTGTATCACCCCACTTAGCATG‑CAGGC‑GGTATCTGGTTATCCCGTTTCCGAAAGTCTGCTGGACCCGGCAGCCGAAGCCGCTATGGGCCATATTGAGCTGGGTAAATGGGCTAATTTAGTGATTCTCGCCCCTGCCACGGCAGATTTGATTGCCCGTGTTGCTGCCGGAATGGCGaa  <  2:842758/238‑1 (MQ=255)
                                                                                                                                                                                                                                          tGCGTCGGTTGCGCGATCGCGGGGCCGAC‑GCCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCTATGGGCCATATTGAGCTGGGTAAATGGGCTGATTTAGTGATTCTCGCCCCTGCCACGGCAGATTTGATTGCCCGTGTTGCTTCCGGAATGGCGaa  <  2:1163452/238‑1 (MQ=255)
                                                                                                                                                                                                                                          tGCGCCGTTTGCGCGAGCGCGGGGCCGTC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCTATGGGCCATATTGAGCTGGGTAAATGGGCTGATTTAGTGATTCTCGCCCCTGCCACGGCAGATTTGATTGCCCGTGTTGCTGCCGGAATGGCGaa  <  1:738291/238‑1 (MQ=255)
                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                  
TGTGGTGCTCGCATCCTGTCATAGCCGTTTCGTTAAATCGACGGCCAGTTTTCAATCCTGGAAAGCGCCTCGCAAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTAT‑AAAACCCCTGAAC‑TGGTGCGTCGTTTGCGCGATCGCGGGGCCGAC‑GTCCGCGTAGCCATGACCGAAG‑C‑GGCAAAAGCCTTTATCACCCCACTTAGCTTG‑CAGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCTATGGGCCATATTGAGCTGGGTAAATGGGCTGATTTAGTGATTCTCGCCCCTGCCACGGCAGATTTGATTGCCCGTGTTGCTGCCGGAATGGCGAA  >  NC_000913/3812571‑3813040

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A