Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F17 I0 R1 155 84.1 1797446 90.9% 1633878 230.3

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,966,913 A→C 14.4% S166S (TCA→TCC)  rho → transcription termination factor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,966,9130AC14.4% 217.3 / 4.0 95S166S (TCA→TCC) rhotranscription termination factor
Reads supporting (aligned to +/- strand):  ref base A (44/32);  new base C (2/14);  total (46/49)
Fisher's exact test for biased strand distribution p-value = 1.73e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTT‑GCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTGTGT‑GCTGATGGTTCTGCTGATCGACGAACGTCCGGAAGAAGTAACCGAGATGCAGCGTCTGGTAAAAGGTGAAGTTGTTGCTTCTACCTTTGACGAACCCGCATCTC‑GCCACGTTCAGGTTGCGGAAATG  >  NC_000913/3966676‑3967150
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                               
ccgTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTT‑GCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCACGCTGCAC‑GCAAACTCCCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCCGGTACTGGACCTGGCATCa                                                                                                                                                                                                                                                 >  2:258331/1‑238 (MQ=255)
    tccacccTCCGCACTTGTAACACCATGTTGGGTAAAGTGCGGCCCCCGAAAGAAGGTGAACGCTATTTT‑GCGCCGCTGAAAGTTAACGAAGTTAACTTCTACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTTAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCGCGCGTACTGGATCTGGCATCACCTAt                                                                                                                                                                                                                                            <  1:737274/234‑1 (MQ=255)
         cccccccACTGGTGTTCCCCTCTCTGGTAAGATTCCCCCGCCGAAAGAAGGTGAACGCTATTTT‑GCGCTGGTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTc                                                                                                                                                                                                                                       <  1:648200/233‑1 (MQ=255)
             cGCACTGGTGATACCATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTT‑GCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGACCGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGCCATAACACATCGGCCGTg                                                                                                                                                                                                                                    >  2:471104/1‑238 (MQ=255)
             cGCACTGGTGATACCATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTT‑GCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTgg                                                                                                                                                                                                                                   >  2:633302/1‑239 (MQ=255)
                   gggagtACCATTTCAGTTAATATTCGCCCGCCGAAAGAAGGTGAACGCTATTTT‑GCGCTGCTGAAAGTTAACGAAGTGAACTTCGACAAACCTGAAAACGCCCGCAACAAAAGCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGc                                                                                                                                                                                                                              <  2:667748/233‑1 (MQ=255)
                   ggTGATACCATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTT‑GCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCg                                                                                                                                                                                                                             <  2:863608/239‑1 (MQ=255)
                    ggttttcctttgtgtggaaGGTTGGCCCGCCGAAAAAAGGTGAACGCTATTTT‑GCGCTGCTGAAATTTAACGAAGTTAACTTCGACCAACCTGAAAACGCCCGCAACAAAATCCTCGTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCg                                                                                                                                                                                                                             <  1:324160/221‑1 (MQ=255)
                    gggATACCATCCGTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTT‑GCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCg                                                                                                                                                                                                                             <  2:23787/236‑1 (MQ=255)
                       ttACCATTTGTGTTATAATTCTCCCTCCGAAAGAATGTGAACGCTAGTTT‑GCGCTGCTGAAAGGTAACGAAGTTAACTTCGACAACCCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGt                                                                                                                                                                                                                         <  1:113209/238‑1 (MQ=255)
                       tgccttttcttgtaacactccccccgtcGAAAGAAGGTGAACGCTATTTT‑GCGCTGCTGAAAGATAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAATCTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGt                                                                                                                                                                                                                         <  1:773120/217‑1 (MQ=255)
                       atcccttcttTGATAAGCTTCGCCCGTCGAAAGAAGGTGAACGCTATTTT‑GCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGt                                                                                                                                                                                                                         <  2:615673/233‑1 (MQ=255)
                        tcctctttttgtaaaGTTTCCCCCGCCGAAAGAAGGTGAACGCTTTTTT‑GCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGt                                                                                                                                                                                                                         <  1:279924/225‑1 (MQ=255)
                          ccATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTT‑GCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCACCGTgg                                                                                                                                                                                                                          >  2:259836/1‑235 (MQ=255)
                              ctctGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTT‑GCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTCACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGAGCGGGCATCACCTATCGGTCGTGGTCACCTGGGTCTGATtg                                                                                                                                                                                                                  >  2:209039/1‑239 (MQ=255)
                              ctctGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTT‑GCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATtg                                                                                                                                                                                                                  >  1:820117/1‑239 (MQ=255)
                              ctctGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTT‑GCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGAACTGGAATCACCTATCGGTCGTGGTCAGCGTGGTCTGATtg                                                                                                                                                                                                                  >  2:437426/1‑239 (MQ=255)
                              ctctGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTT‑GCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGAAACGGTTCTACTGAAAATTTAACTGCCCGCGTACTGGATCTGGCATCCCCAATCGGCCGTGGTAAGCGGGGCCTGATtg                                                                                                                                                                                                                  >  1:427127/1‑239 (MQ=255)
                              ctctGGTAAGATTCGCCCGCCGAAAGAAGGAGAACGCTATTTT‑GCGCTGCGGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGGGCA‑CT‑TAACACCGCTGCAC‑GCAAACTCTCGTCTGCGTATGTAACGAGGTCACGGCTCACATACAGATTTAACTGCTCGCGTACCGGATCTGGAATCACCCAACGGtaggggcaggcgggggctgaggg                                                                                                                                                                                                                  >  1:890313/1‑217 (MQ=255)
                              ctctGGTAACATTCGCCCGCCGAAAGAAGGCGAACACTATTTT‑GCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGGTCTACTGAAGATTTAACGTCTCGCGTACTGGATCTGGCATCACCTCTCGGTCGTgtgcaccgggggttgcttg                                                                                                                                                                                                                  >  1:861603/1‑221 (MQ=255)
                                    tatcatccccccgcaGAAAAAAGGGGAACGCTTTTTT‑GGGCTGTTAAAAGTTAACGAATTTAACTTCGACAACCCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCCCGTCTGCGTATGGACCGGGGTAACGGTTCTACTGAAAATTTAACGGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCa                                                                                                                                                                                                             <  1:781740/229‑1 (MQ=255)
                                      aGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTT‑GCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTAACGGTCGGGGTCAGCGGGGTCGGATTGTGGCAcc                                                                                                                                                                                                           >  1:80938/1‑238 (MQ=255)
                                           cgcccgccGAAAGAAGGTGAACGCTATTTT‑GCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTGGGGGTCAGCGTGGGCGGATTggggaccggcggaa                                                                                                                                                                                                     >  1:846219/1‑229 (MQ=255)
                                            ccccgcgGAAAGAGGGGTAACCTTATTTT‑CTGTTTGTAAAAGTTAACGAAGTTACCTTCGAAAAACCAGAAAACGCCCGAAACAACATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCGGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCGGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGaaa                                                                                                                                                                                                    <  1:786925/238‑1 (MQ=255)
                                             cccgccGAAAGAAGGTGAACGCTATTTT‑GCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTACCGGTTTGACTGAGGATTTAACTGCTCCGGTACTGGATCGGGCGTCCCCTACCGGGCGTGGTCGGCGCGGGCGGATGAGGGCACGCCCGAAAg                                                                                                                                                                                                   >  1:588583/1‑239 (MQ=255)
                                                 ccgAAAGAAGGTGAACGCTATTTT‑GCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCgg                                                                                                                                                                                               >  2:79094/1‑239 (MQ=255)
                                                     aagaggggtgagccttgttt‑GCGGTGCTGAAAATGAACGAATTTACCTGCGACAACCCGGAAACCGCCCGCAACAAAATCC‑GTTTGAAAAGCT‑TAACCCCGCTACGA‑GCAAACTCTCGGCTGCTTATGAAACGTGGTAAGGGTTCAACTGAAGATTAAACTGGTCGGGTACGGGATCTGCCATCTCCTACCGGTCGGGGTCAGCGGGGTCTGATTGTGGCACCGCCGAAAGCCGGTaa                                                                                                                                                                                            <  1:258331/221‑1 (MQ=255)
                                                     aagaagGTGAACGCTATTTT‑GCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAACCGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACCCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTaa                                                                                                                                                                                            <  2:451607/238‑1 (MQ=255)
                                                         agGGGAACGCTTTTTTGGCGC‑GCGGAAAGTTAACGAATTTAACTCCGACAAACCTAAAACCGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCACGTCTGCGTATGGAACGTGGTAACGTTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGGGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCa                                                                                                                                                                                       <  1:701470/239‑1 (MQ=255)
                                                              taacctttttctgtccgccggAAAGTAAACAATGTTAATTTCGCAAAACCGCAAAACGACCCAAAAAAAACCCCCGTCGAGAA‑‑T‑TAACCCCGGTTCACAGCAAACTCCGGTCGGGGTATGGAACGTGGTAGCGTTTCTGTTGAAGGTTGATATGCTCGTCTACTGGGTCGGGCATCTCCGATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCAtgc                                                                                                                                                                                    <  1:895165/218‑1 (MQ=255)
                                                              aaccgtATTTT‑GGGCTGAGAAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCAtgctg                                                                                                                                                                                  <  2:285885/234‑1 (MQ=255)
                                                                acgctttttggggggggggAAAGTTAAGCAAGGTAACTTGGAAAAGCGTGAAAACGCCCGCAACAAGATCCGTTTGGAGAA‑CT‑TACCCCGGCTGCAC‑GCAAACTGTGGTCTGGGTATGGAACGTGGTAACGGTTCTACTGAAGATTGAACGGCTGGCGGAGTGGATCGGGCAGCGCCTGTCGGGCGGGGTCGGCGGGGTCGGATGGTGGCACCGCCGAAAGCCGGTAAAACCAtgctg                                                                                                                                                                                  <  1:209039/220‑1 (MQ=255)
                                                                 gCTATTTT‑GCGCTGCTGAAAGTTAAAGAAGTTAACTTGGACAATCCTGAAAACGCCCGCAAAAAAATCCTCTTTGAGAA‑CT‑TACCCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCAtgctgctg                                                                                                                                                                               <  2:641136/239‑1 (MQ=255)
                                                                   tttttt‑GCCCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCGGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TACCCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCa                                                                                                                                                                             <  2:493325/237‑1 (MQ=255)
                                                                        t‑GCGTTTCTAAAAGTTAACGAGTTTAACTGCGACAAACCGGAACACGCCCGAAACCAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGACCGTGGTAACGGTTCTACTGAAGATTTAACTGCGCGCGTACTGGATCTGGCATCACCTATAGGTCGTGGTCAGCGTGGTCTGATTGTGGCCCCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACa                                                                                                                                                                        <  1:790938/239‑1 (MQ=255)
                                                                         ttcgcgtcatacatttAATGAAGTTTACTTCCACAAACCTGAAAACGCCCGCACCAAACTCCTCTTTTAGAC‑CT‑AAACCCCCCTTCAC‑GCAAACTCTCGTCTGCGTAGGTAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCCCCTATCGGTCGTGGTCAGCGTGTTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACa                                                                                                                                                                        <  1:173184/225‑1 (MQ=255)
                                                                         tgccgtttggAAAATTAACCAATTTAATCTCGAAAATCCTGAAATCGCCCGCAACAAAAGCCGTCTGGAGAA‑AT‑TACACCCCCTGCCG‑GCAAGCTTTCGTTGGCGTATGGAAGGTGGAAACGGTTCTTCTGAAGATTGAACGGCTGGCGTTCTGGATCTGGCAGCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACa                                                                                                                                                                        <  1:150710/230‑1 (MQ=255)
                                                                              ttgtgAAAGGTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCt                                                                                                                                                                   <  2:590707/236‑1 (MQ=255)
                                                                                ctgAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCGTCAGAACATTGCTCa                                                                                                                                                                 >  2:402802/1‑239 (MQ=255)
                                                                                ctgAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGGGGCACCGCCGAAAGCCGGTAAACCCAAGCTGCTGCAGAAAATTGcccc                                                                                                                                                                 >  1:192414/1‑236 (MQ=255)
                                                                                 tgAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCa                                                                                                                                                                 <  2:80938/238‑1 (MQ=255)
                                                                                   aaaGTTAAACAATTTAACTCCGAAAACCCGAAAAACCCCCGAAACAAAATCCTCTTTGAGAA‑CT‑TACCCCCGCTGCAC‑GCAAACTCTCGTCGGCG‑‑TGGAACGTGGGAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCa                                                                                                                                                            <  1:740843/239‑1 (MQ=255)
                                                                                     aGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TACCCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCa                                                                                                                                                            <  2:310771/239‑1 (MQ=255)
                                                                                     aGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCCCCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCa                                                                                                                                                            <  2:820117/239‑1 (MQ=255)
                                                                                     aGTTAACGAAGTTAACTTCGACAAACCGGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCa                                                                                                                                                            <  2:54191/239‑1 (MQ=255)
                                                                                        tAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAAAATTGCCCCAAGCAtt                                                                                                                                                          >  1:113450/1‑238 (MQ=255)
                                                                                          aCGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCt                                                                                                                                                       >  2:681745/1‑239 (MQ=255)
                                                                                                ttAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCGGCTGCAC‑GCAAACTCACGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAac                                                                                                                                                 <  2:769395/239‑1 (MQ=255)
                                                                                                 tAACTTGGAAAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAACCTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAac                                                                                                                                                 <  2:737803/238‑1 (MQ=255)
                                                                                                  agcTTCGACAAACCGGAAGACGCCCGCAAAAAATGTCTGTTTGAGAT‑TT‑TACCCCCACGGGAC‑GCAAATGTGCGTCTGCGTAGGGAACGTTGTAACGGTTCTACTGAAGATTGAACGGCTCGCGTACGGGATCGGGCACCACCTCTGGGTCGTGGTCAGCGTGGTCTGATTGTGGAACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAatca                                                                                                                                               <  1:383352/237‑1 (MQ=255)
                                                                                                    cTTCAAAAACCCTCAAACCCCCCCCAAAAAAACCCTCTTTGAGAA‑CT‑TACCCCCGGTGCCC‑TAAAACCCTCGTTTGCGTATGGAACGTGGTAACGGTTCCTCTGAAGATTTAACGGCGGGCGTACTGGATCTGGCATCCCCTATCGGTCGTGGTCAGCGTGGTCTGATTTTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAaccacc                                                                                                                                             <  1:63774/239‑1 (MQ=255)
                                                                                                          ccacccggAAACCCCCCGCAACAAATCCCTCTTGGAAAA‑CT‑TAACCCCCCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCTTACTGGATCTGGCATCCCTTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGAtt                                                                                                                                       <  1:144997/232‑1 (MQ=255)
                                                                                                          cAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACCCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGAtt                                                                                                                                       <  2:853011/239‑1 (MQ=255)
                                                                                                          aaaaCCTAAAACCCCCCCCAAAAAAATCCTTTTGGGGAA‑CT‑TACCCCCGCTGCAC‑GCAAACTCGCTTCTGGTAATGGAAGGTGGTAAGGGTTCTACTGAAGTTTTAACGGCTCGCGTACTGGTTCTGGCATCCCCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGAtt                                                                                                                                       <  1:79094/238‑1 (MQ=255)
                                                                                                                 gAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTGTGT‑GCt                                                                                                                               <  2:113450/239‑1 (MQ=255)
                                                                                                                 gAAAACCCCCGCAACAAAACCCTCTTTGA‑AA‑CTCTAACCCCCTTGCAC‑GAAAACTCTCGTCTGGGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTGTGT‑GCt                                                                                                                               <  1:591891/239‑1 (MQ=255)
                                                                                                                  aaaaCGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCGGCGTGGTCTGATTGTGGAACCGCCGAAAGCCGGTAAAACCATGCTGCTGCCGAACATTGCTCAGAGCATTCCTTAAAACACCCCGGATTGTGT‑Gccg                                                                                                                              >  1:853011/1‑237 (MQ=255)
                                                                                                                         ccGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTGTGT‑GCTGATGGTTc                                                                                                                       >  2:333270/1‑239 (MQ=255)
                                                                                                                                                aatt‑tAACCCCGCTTGCC‑GCAAACCCTCGTCGGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCCCCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTGTGT‑GCTGATGGTTCTGCTGATCGACGAACGTCCGga                                                                                                 <  2:673213/236‑1 (MQ=255)
                                                                                                                                                       aCCCCTCTGCAG‑GCAAACTCCCGTCTGCTTATGTAACGTGGTACCGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCCCCTATCGGTCGGGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAATCCATGCTGCTGCa                                                                                                                                                                             <  1:455629/158‑1 (MQ=255)
                                                                                                                                                       aCCCCGCTGACC‑GCAAACCCTCGTTGGGGTAGGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTGTGT‑GCTGATGGTTCTGCTGATCGACGAACGTCCGGAAGAAGt                                                                                           <  2:444540/239‑1 (MQ=255)
                                                                                                                                                             cTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCGGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTGTGT‑GCTGATGGTTCTGCTGATCGCCGAACGTCCGGAAAAAGAAACCga                                                                                     >  1:523744/1‑239 (MQ=255)
                                                                                                                                                              tGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTGTGT‑GCTGATGGTTCTGCTGATCGACGAACGTCCGGAAAAAGAAACCgaa                                                                                    >  1:693828/1‑238 (MQ=255)
                                                                                                                                                              tGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTCCAGAACATTGCTCAGAGCATTGCTTACACCCACCCGGATTGTGG‑GCTGATGGTTCTGCTGATCGACGAACGTCCGGAAGAAGTAACCggg                                                                                    >  2:207739/1‑237 (MQ=255)
                                                                                                                                                                cAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGCGCATTGCTTACAACCACCCGGATTGTGT‑GCTGATGGTTATGCTGATCGACGAACGTCCGGAAGAAGTAACCGAAAt                                                                                  >  2:366498/1‑239 (MQ=255)
                                                                                                                                                                 aC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCt                                                                                                                                                                   >  2:455629/1‑158 (MQ=255)
                                                                                                                                                                      aaaCTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTGTGT‑GCTGATGGTTCTTCTGATCGACGAACGTCCGAAAGAAGTAACCGAAATGCAGc                                                                             >  2:418890/1‑239 (MQ=255)
                                                                                                                                                                        cctctCGTTTTGGTAGGGAACGTGGTAACGTTTCTACTGAAGATTTAACTGCTCGCGTACGGGATCTGGCATCCCCTATCGGTCGTGGTCAGCGTGGTCTTATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTGTGT‑GCTGATGGTTCTGCTGATCGACGAACGTCCGGAAGAAGTAACCGAGATGCAGCGt                                                                           <  1:633302/238‑1 (MQ=255)
                                                                                                                                                                             cGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGTTCAGAGCATTGCTTACAACCACCCGGATTGTGG‑GCTGATGGTTCTGCTGATCCACGAACGTCCGGAAGAAGTAACCGAGATGCAGCGACTGGt                                                                      >  2:366744/1‑239 (MQ=255)
                                                                                                                                                                                   cGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTGTGT‑GCTGATGGTTCTGCTGATCGACGAACGTCCGGAAGAAGTAACCGAGAGGCAGCGTCTGGTAAAAgg                                                                >  2:76349/1‑239 (MQ=255)
                                                                                                                                                                                   cGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCGGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTGTGG‑GCTGATGGTTCTGCTGATCGACGAGCGTCCGAAAAAAGAAACCATGATCGAGCGTCTGGTAAAAgg                                                                >  1:86105/1‑239 (MQ=255)
                                                                                                                                                                                    gTAGGGAACGTGGTAACGTTTCCAATGAAGATTGAACTGCTAGGGTACTGGATCTGGCATCCCCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTGTGT‑GCTGATGGTTCTGCTGATCGACGAACGTCCGGAAGAAGTAACCGAGATGCAGCGTCTGGTAAAAgg                                                                <  2:619614/238‑1 (MQ=255)
                                                                                                                                                                                     ttggtgccGTGGTACCGTTTTTTCTGATGTTTTAATTGTTGGCGTCCTGGATCTGGCATCCCCTATCGGTCGTGTTCAGCGTGGTCTGATTGTGGCGCCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTGTGT‑GCTGATGGTTCTGCTGATCGACGAACGTCCGGAAGAAGTAACCGAGATGCAGCGTCTGGTAAAAGGTg                                                              <  1:437426/232‑1 (MQ=255)
                                                                                                                                                                                      aTGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATAACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCCGAGCATGGCTTCCAACCACCCGGATTGTGT‑GCTGATGGTTCTGCGAATCGACGAAGGTCCGGAAGGAGAAAACGAAATGGCGCGAATGGGAAAAGGGGa                                                             >  1:711587/1‑239 (MQ=255)
                                                                                                                                                                                            cggggTAACGGTTCCAGTGAAAGTTTAACGTCCGGCTTACTGGATCTGGCATCCTCTATCGGTCGTGGTCAGGGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTGTGT‑GCTGATGGTTCTGCTGATCGACGAACGTCCGGAAGAAGTAACCGAGATGCAGCGTCTGGTAAAAGGTGAAgttgt                                                       <  2:70433/236‑1 (MQ=255)
                                                                                                                                                                                             gTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTGTGT‑GCTGATGGTTCTGCTGATCGAGGAACGTCCGGAAGAAGTAACCGAGATGCAGCGTCGGTTAAAAGGTGAAgttgtt                                                      >  2:111241/1‑239 (MQ=255)
                                                                                                                                                                                                    cGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTGGGT‑GCTGATGGTTCTGCTGCTCGACGAACGTCCGGAAGAAGGAACCGAGATGCCGGGTCTGGTAAAAGGGGACGGTGTTGGTTca                                                >  1:874308/1‑237 (MQ=255)
                                                                                                                                                                                                    cGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTCTGT‑GCTGATGGTTTTCCTGATGGACGACCGTCCGGACGAGTTAACCGAGATCGCGGGTACGGAAAAAGGAGAAGGTGGGGCTTcc                                                >  1:715028/1‑237 (MQ=255)
                                                                                                                                                                                                           aCTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTGTGT‑GCTGATGGTTCTGCTGATCGCCGAACGTCCGGAAGAAGTAACCGAGATGCAGCGTCTGGTAAAAGGTGAAGTTGTTGCTTCTACCTTTg                                         >  2:224066/1‑238 (MQ=255)
                                                                                                                                                                                                               aaGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTGTGT‑GCTGATGGTTCTGCTGATCGACGAACGTCCGGAAGAAGTAACCGAGATGCAGCGCCTGGTAAAAGGTGAAGTTGTTGCTTCTACCTTTGACGa                                     >  2:808010/1‑238 (MQ=255)
                                                                                                                                                                                                                 gATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCCTGCTGCTGCAGAACATGGCTCAGAGCATTGCTTCCAACCACCCGGA‑TGTGTGGCTGCTGGTTCTGCTGATCGAGGAACTTCCGGAAGAAGTACCAGAGATGCAGGGTCGGGGAAAAGGTGAAGGTGTTGGTATTACCTTTGAAAAAcc                                  >  1:243634/1‑239 (MQ=255)
                                                                                                                                                                                                                 gATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTGTGT‑GCTGATGGTTCTGCTGATCGACGAACGTCCGGAAGAAGGAACCGAGATGCAGCGTCTGGTAAAAGGGGAAGTTGTTGCTTCTACCTTTGActgac                                   >  2:441122/1‑234 (MQ=255)
                                                                                                                                                                                                                      aaCTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTAACACCACCCGGATTGTGT‑GATGATGGTTCTCCTGCACGCCGAACGTCCGGAAGAAGTAACACCAATGCCGCGCCTGGTAAAAGGTGAGTGTGTTGCTTCCACCCTTGACAAACCCGcc                              >  1:153066/1‑237 (MQ=255)
                                                                                                                                                                                                                           ccggggttcTGGATCTGGCATACCCTATCGGTCGTGGTCAGCGTGGTCTGATTGGGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTGTGT‑GCTGATGGTTCTGCTGATCGACGAACGTCCGGAAGAAGTAACCGAGATGCAGCGTCTGGTAAAAGGTGAAGTTGTTGCTTCTACCTTTGACGAACCCGCATCTC‑Gc                       <  2:780300/231‑1 (MQ=255)
                                                                                                                                                                                                                           cTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTGTGT‑GCTGATGGTTCTGCTGATCGACGAACGTCCGGAAGAAGTaa                                                                                         <  2:656283/174‑1 (MQ=255)
                                                                                                                                                                                                                           cTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTGTGT‑GCTGATGGTTCTGCTGATCGACGAACGTCCGGAAGAAGTaa                                                                                         >  1:656283/1‑174 (MQ=255)
                                                                                                                                                                                                                           cTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTGTGT‑GCTGATGGTTCTGCTGATCGACGAACGTCCGGAAGAAGTAACCGAGATGCAGCGTCTGGTAAAAGGGGAAGTGGTTGCTTCTACCTTTGCCGAACCCGCATCTC‑g                        >  2:746772/1‑238 (MQ=255)
                                                                                                                                                                                                                            tCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTGTGT‑GCTGATGGTTCTGCTGATCGACGAACGTCCGGAGGCAGTAACCGAGCTGAACCGTCTGGTACAAGGGGAATTGGTTGCTTTTCCCTTTGCAGAACCCCCactcccac                       >  1:493806/1‑232 (MQ=255)
                                                                                                                                                                                                                             cgcgTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCCGAGCATTGCTTACAACCACCCGGATTGTGG‑TCTGATGGTTATGCTGATCGAAGAACGTCCGGAAGAAGGAACCGAGATGCAGCGTCTGGTAAAAGGTGAAGTTGTTGCTTCTCCCTTTTACGAACCCCCAtctcacaa                      >  1:860839/1‑235 (MQ=255)
                                                                                                                                                                                                                             cgcgTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTGTGT‑GCTGATGGTTCTGCTGATCGACGAACGTCCGGAAGAAGTAACCGAGATGCAGCGTCTGGTAAAAGGTGAAGTTGTTGCTTCTACCTTTGACGAACCCGCATCTC‑Gcc                      >  2:740935/1‑238 (MQ=255)
                                                                                                                                                                                                                             cgcgTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTGTGT‑GCTGATGGTTCTGCTGATCGACGAACGTCCGGAAGAAGTAACCGAGATGCAGCGTCTGGTAAAAGGGGAAGTTGTTGCTTCTACCTTTGACGAACCCGCATCTC‑Gcc                      >  2:360019/1‑238 (MQ=255)
                                                                                                                                                                                                                                 tcttGGATCTGGCATCCCCTTTCGGTGGGGGTAAGGGGTGTCTGATTGTGGCCCCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTGTGT‑GCTGATGGTTCTGCTGATCGACGAACGTCCGGAAGAAGTAACCGAGATGCAGCGTCTGGTAAAAGGTGAAGTTGTTGCTTCTACCTTTGACGAACCCGCATCTC‑GCCACGtt                 <  1:740935/236‑1 (MQ=255)
                                                                                                                                                                                                                                  tttGGATCTGGTATCCCTTTTCGGTCGTGGTCGGCGTGGTCTGATTGGGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTGTGT‑GCTGATGGTTCTGCTGATCGACGAACGTCCGGAAGAAGTAACCGAGATGCAGCGTCTGGTAAAAGGTGAAGTTGTTGCTTCTACCTTTGACGAACCCGCATCTC‑GCCACGtt                 <  1:259836/236‑1 (MQ=255)
                                                                                                                                                                                                                                                cACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTGTGT‑GCTGATGGTTCTGCTGATCGAGAAACGTCCGGAAGAAGTAACCGCGATGAAGCGTCTGGGAAAAGGTGAAGGTGTTGCTGCTACCTTTGACGAACCCGCCTCCC‑GCCCCGTTCAGGTGGCGGaaaag  >  1:405604/1‑237 (MQ=255)
                                                                                                                                                                                                                                                cACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTGTGT‑GCTGATGGTTCTGCTGATCGACGACCGTCCGGAAGAAGTAACCGAGATGCAGCGTCTGGTAAAAGGGGAAGTTGTTGCTTCTACCTTTGACAAACCC‑CAACTCGGCCACGACCAGGTGGCGGaaaag  >  2:510317/1‑237 (MQ=255)
                                                                                                                                                                                                                                                cACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTGTGT‑GCTGATGGTTCTGCTGATCGACGAACGTCCGGAAGAAGTAACCGAGATGCAGCGTCTGGTAAAAGGGGAAGTTGTTGCTTCTACCTTTGCGGAACCCCCATCTC‑GCGACGTTCAGGGTGGGGAAATg  >  1:72281/1‑239 (MQ=255)
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                               
CCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTT‑GCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAA‑CT‑TAACCCCGCTGCAC‑GCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTGTGT‑GCTGATGGTTCTGCTGATCGACGAACGTCCGGAAGAAGTAACCGAGATGCAGCGTCTGGTAAAAGGTGAAGTTGTTGCTTCTACCTTTGACGAACCCGCATCTC‑GCCACGTTCAGGTTGCGGAAATG  >  NC_000913/3966676‑3967150

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A