Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F9 I0 R1 71 67.1 1514203 90.7% 1373382 220.3

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,790,968 A→C 10.2% V126G (GTG→GGG)  tdh ← L‑threonine 3‑dehydrogenase, NAD(P)‑binding

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,790,9680AC10.2% 219.3 / 2.6 90V126G (GTG→GGG) tdhL‑threonine 3‑dehydrogenase, NAD(P)‑binding
Reads supporting (aligned to +/- strand):  ref base A (37/40);  new base C (6/7);  total (43/47)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCA‑ACGTGTTTCGCCACCGCCGCTGCCAT‑AATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTACCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGA  >  NC_000913/3790744‑3791181
                                                                                                                                                                                                                                    |                                                                                                                                                                                                                      
ggCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCA‑ACGTGTTTCGCCACCGCCGCTGCCAT‑AATACCAATCGGGCCTGCACCAGAAACCCGCACATCTTCGCCCACCAGATCAAA‑CGAAAGCCCGGTCGGCAC‑GGCGTTACCGCAGGGATCAAAACTTCCGGCTAAGTCATCGGAAATATTGCCGGGGATGTTGAAGGCTCTGAATGCCGGGATCCCCaa                                                                                                                                                                                                                    >  2:672111/1‑228 (MQ=255)
            tAACATCAGTGATCACCACATTGCGTGCACCA‑ACGTGTTTCGCCACCGCCGCTGCCAT‑AATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGGTACCGAAGGGATCAAAAATTGCGGCTAAGGCATCGGAAATATTGTCCGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGAAATTCCGCaaa                                                                                                                                                                                                        >  1:113033/1‑229 (MQ=255)
                      gacccccacAATGCG‑GCACCACACGTGTTCCCCCACCGCCGCTGCCAT‑AATGCCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCggg                                                                                                                                                                                              <  1:282649/224‑1 (MQ=255)
                          accacATTGCGTGCACCA‑ACGTGTTTCGCCACCGCCGCTGCCAT‑AATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAAAATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATAACCAGATATTCGGCAAGGCAGCCCGGGGGa                                                                                                                                                                                           >  2:634413/1‑228 (MQ=255)
                            ccacctgcggtcaccaaaggtgtTTCCCGCCCGCCGCTGCCAT‑AATACCAATCCGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGAtt                                                                                                                                                                                         <  1:353726/210‑1 (MQ=255)
                            cacaTTGCGTGCACCA‑ACGTGTTTCGCCACCGCCGCTGCCAT‑AATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCCCCAGATATTCGGCAAAGCAGCCCGGGCGttt                                                                                                                                                                                         >  1:665355/1‑228 (MQ=255)
                             ccacgttcggcgcccacgctgtTTCCCCCCCGCCCGCGCCCTAAATCCCAATCGGGCCTGCAGCAGAAACCAACCCGGCTTCGCCCACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCCGCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGAtt                                                                                                                                                                                         <  2:598285/210‑1 (MQ=255)
                                 tGCGTGCACCG‑ACGTGTTTCGCCACCGCCGCTGCCAT‑AATACCAATCGGGCCTGCACCAGAAACCAGCCCATCTTCGCCCACCAGATCAAA‑CGCCAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTATCGGGGATTTTGAAGGGGTTGAATCACGGGATCCCCAGATATTCAGCAAAACAGCCCGGGCGaaaaaaaca                                                                                                                                                                                   >  2:251101/1‑221 (MQ=255)
                                 tGCGTGCACCA‑ACGTGTTTCGCCACCGCCGCTGCCAT‑AATACCAATCGGGCCTGCACCAGCAACCAGCACATCTTCGCCCACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGGCCTCGGAAATATTGTCGGGGATTTTGAAGACGTTGAATGCAGGGTTAACCAGATATTAGGCAAGACAACCCGGGCGATTA‑ACAcc                                                                                                                                                                                  >  2:71068/1‑229 (MQ=255)
                                  gtgTGCACCA‑ACGTGTTCGCCCACCGCCGCTGCCAT‑AATTCCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACAcc                                                                                                                                                                                  <  1:422188/226‑1 (MQ=255)
                                  gccgcccccA‑ACTTTTTCCGCCCCCGCCGCTGCCAT‑AATCCCAATCGGGCCTGCACCAGAAACCAGCACATCGTCGCCCACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACAcc                                                                                                                                                                                  <  1:65756/221‑1 (MQ=255)
                                   taaagacgacagtgttgccGCCCCCGCCGCTGCCAT‑AATACCAATCGGGCCTGCACAAGAACCCAGCACATCTTCGCCCACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACAcc                                                                                                                                                                                  <  1:677657/210‑1 (MQ=255)
                                     tggcccaacggttttgccccACCGCCCCTGCCAT‑AAGACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCATATCAAA‑CGACAGCGGTGTAGGCAG‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAAc                                                                                                                                                                               <  2:584475/211‑1 (MQ=255)
                                      gCACCA‑GCGTGTTTCGCCACCGCCGCTGCCAT‑AATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCCAAGTCATCGGAAATAGTGTCGGGGTGTTTGAAGGCGTTGAATGCCGGGATCACCCGATATTCGGCAAAGCAGCCCGGGCGGTTA‑ACACCAACGc                                                                                                                                                                             >  2:179518/1‑229 (MQ=255)
                                      gCACCA‑ACGTGTTTCGCCACCGCCGCTGCCAT‑AATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCTGGGATCACCAACAATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGc                                                                                                                                                                             >  2:257098/1‑229 (MQ=255)
                                      gCACCA‑ACGTGTTTCGCCACCGCCGCTGCCAT‑AATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCAACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGCTACCGAAGGGATCAAAAATTGCGCCTAAGTCATCGGAAATATGGTCGGGGGTTTTGAAGGCGTTGAATGCCGGGACCCCCAGAATTTCGGCAAAGACGCCCGGGGGA‑TA‑AAACCCACGcc                                                                                                                                                                            >  2:691773/1‑229 (MQ=255)
                                              cGTGTTTCGCCACCGCCGCTGCCAT‑AATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGACCCCCAGATATTCGGCAAAGCAGCCCGGGCGATAA‑ACACCacaccccacacg                                                                                                                                                                      >  2:311789/1‑218 (MQ=255)
                                                   tccGCCCCCCCCGCTGCCAT‑AATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTg                                                                                                                                                                  <  1:22610/226‑1 (MQ=255)
                                                         cccgccgCTGCCAT‑AATCCCAATCGGGCCTGCCGCAGAAACCAGCACATCTTCGACCACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGca                                                                                                                                                             <  1:19640/226‑1 (MQ=255)
                                                          ccgccgCTGCCAT‑AATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCCCCAGATATTCTGCAAAGCAGCACGGGGGATTA‑ACACCAAAGCCTATcactgtctcttata                                                                                                                                                           >  2:677656/1‑215 (MQ=255)
                                                          ccgccgCTGCCAT‑AATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGccca                                                                                                                                                           >  1:549270/1‑228 (MQ=255)
                                                               gcTGCCAT‑AATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATggg                                                                                                                                                     <  1:614922/229‑1 (MQ=255)
                                                                 tGCCAA‑AATACCAATCGGGCCTGCACCAGAAACCAGCACATCGTCGCCCAACAGATCAAA‑CGACAGCGAGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTa                                                                                                                                                   <  1:38968/229‑1 (MQ=255)
                                                                   cctt‑aataCCAACTGGGCCGGCACCCGAAACCTGGCCATTTTCGCCCACCAAATCAAA‑CGCCAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACg                                                                                                                                                 <  2:102392/226‑1 (MQ=255)
                                                                      taaataCCAAACGGGCCTGCACCAGAAACCAGCCCATCTTCCCCCCCCAGAACAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGac                                                                                                                                               <  2:549270/227‑1 (MQ=255)
                                                                      t‑aataCCAATCGGGCGTGCCCCAGAAACCCGGACATCTTCGCCCACCGCATCAAA‑CGGCAGCGCGGTATGCCC‑GGCGTTGCCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATGTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGacc                                                                                                                                              <  2:474978/229‑1 (MQ=255)
                                                                         agaCCAATCGGGCCTGCTCCAGAAACCAGCACGTCTTCGCCCACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTAATCGGAACTACTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATGa‑a                                                                                                                                                                                      <  1:80311/185‑1 (MQ=255)
                                                                              aaTCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGCAGGGAACAAAAATTGCCGCTAAGTCCTCGGACAAATTCTCGGGGATTTTGCAGGCTTTGAATGCGGGGATCACCAGCAATTAGGCGAACATGCCCAGGCGATTA‑AAACCAACCACTATCGCGTTGCGGCACAAAATGGAACGacaccccaga                                                                                                                                       >  2:254809/1‑221 (MQ=255)
                                                                              aaTCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCCATCGTTTTGCGGCACAAATGGGTACGACCACCACGa                                                                                                                                       >  1:180510/1‑229 (MQ=255)
                                                                              aaTCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑AAACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGa                                                                                                                                       >  1:250931/1‑229 (MQ=255)
                                                                              aaTCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGACAACCAAATATTCGGCAAAGCAGCCCGGGCGATTACACCCCAGC‑CCTAACGAGTTCCGGTCCAAAGGGGTCCAAACACCACgc                                                                                                                                       >  2:4127/1‑228 (MQ=255)
                                                                               aTCGGGCCTGCACCAGAAACCCACACATCTGCGCCCACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGa                                                                                                                                       <  1:311789/228‑1 (MQ=255)
                                                                               aTCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGCTTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCCACGCCCAACGGGTTGCGGCACAAAAGGGAACAGCCCCCACGaa                                                                                                                                      >  2:717049/1‑228 (MQ=255)
                                                                               aTCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCCCAAAAGGGTACGACCACCACGAc                                                                                                                                      >  1:412536/1‑229 (MQ=255)
                                                                                    gCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTAACGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGAGTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑AGCCCACCACCTAACCGTTTGGGGCCCAAAGGGGCAccgccccacacaaggggg                                                                                                                                 >  2:679289/1‑212 (MQ=255)
                                                                                         cACCAGTACCCAGCACAAGTTCGCCCACCAGAGCAAA‑CGGCAGCGGGGTATGCAC‑GGCTTTGCCGAAGGGCTCAAAAATTTCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCa                                                                                                                            <  2:180510/229‑1 (MQ=255)
                                                                                          agacagaaCCAGGACATGTTCGCCCAGCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGGGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAAGATTTGCGGGGATTTTGAAGGCGTGGAAGGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTAGCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCa                                                                                                                            <  1:317937/222‑1 (MQ=255)
                                                                                           ccAGAAACCAGAACAGCTTCGCCCAACAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAAt                                                                                                                          <  1:257098/229‑1 (MQ=255)
                                                                                            cAGAAACCGGCACATATTCGCCGCACAGAACAAA‑CGACAGGGCGGTATGCAT‑GGCGGTACCGAAGGGATTAAAAATTGCGGCTAAGTCATCGGAAACATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATGCGGCAAAGCAGCCCGGGCGATTA‑CCACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCa                                                                                                                            <  1:347501/226‑1 (MQ=255)
                                                                                              gAAACCAGCACATCTTCGCCCACCAGATCAAA‑CGACAGCGCGGAATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCCGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAAGCGTTGAATTACGGGATCACCGGATATTCGGCAAAGCGGCCAGGTCGCTTA‑CCACCAACGCCTCTCCTGTTGCCGCCCCAGTGGGTACGACCACCACGaacatgtcggccatgcc                                                                                                                       >  2:65938/1‑213 (MQ=255)
                                                                                              gAAACAAGCACATCTTCGCCCACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGAc                                                                                                                       >  1:132341/1‑229 (MQ=255)
                                                                                                aaCCCGCCCATCGTTGCCCACCAGAATAAA‑CGGCAGGGCGGGATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTATGACCACCACGACAGTTGCGGCAATGAccc                                                                                                                     <  2:620911/229‑2 (MQ=255)
                                                                                                aaCCAGCCCATCTGCGCCCACCAGAGCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATAGTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCCCCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGAcc                                                                                                                      <  1:282689/228‑1 (MQ=255)
                                                                                                 aCCAGCCCCTCTTTCGCCACCAGAAAAAA‑CGGCCGCGGGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGGCAGCGGAAATATTGTCGGGGATTTTGCAGGCGTTGAATGCCTGGATCACCAGATATTCGGCCAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGTCCACCACGACAGTTGCGGCAATGACcac                                                                                                                    <  2:17668/229‑1 (MQ=255)
                                                                                                   cAGCACATCTTCGCCCACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAAGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCCGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTAAGACCACCCAGCAAGTTGCGGCCATGccccac                                                                                                                   >  2:196777/1‑225 (MQ=255)
                                                                                                      cacaTCTTCGCCCACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCCAAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGt                                                                                                                >  1:157622/1‑228 (MQ=255)
                                                                                                      cacaTCTTCGCCCACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAggg                                                                                                                >  1:539434/1‑227 (MQ=255)
                                                                                                          tCTGCGCCCACTAGATCAAACCAACAG‑GCGG‑ATGGGCGGGCGTTAACGAGTGGATCAAAAATTGCGGCTAAGTCATTGGAAAAATTGTCGGGGATTTTGAAGGGGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGTGATTA‑ACACCAACGCATATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGata                                                                                                            <  2:469957/228‑1 (MQ=255)
                                                                                                           cTTCGCCCACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCCCGACAATTGCGGCAATGACCACAGGGGATATg                                                                                                          >  1:751286/1‑229 (MQ=255)
                                                                                                              cGCCCACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTACCGTGTTGCGGCACAAATGGGGACGACCACCACGACAGTTGCGGCAATGACCCCAGGTGTAATGGc                                                                                                        >  1:420325/1‑228 (MQ=255)
                                                                                                                 ccaccaGATCAAA‑CGGCAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGcc                                                                                                       <  1:605679/226‑1 (MQ=255)
                                                                                                                   accaGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCg                                                                                                   >  1:530931/1‑228 (MQ=255)
                                                                                                                        aTCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCgg                                                                                                                                                               >  2:594908/1‑163 (MQ=255)
                                                                                                                        aTCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCgg                                                                                                                                                               <  1:594909/163‑1 (MQ=255)
                                                                                                                             a‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGCCCCAAGGTGATATGGCCTTCTCCAGAAAcg                                                                                          >  1:273610/1‑227 (MQ=255)
                                                                                                                                gACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGGACGACCACCACGACAGTTGCGGCAATGACCACAGGGGATATGGCCTTCGCCAGAAACGCGac                                                                                      >  1:413795/1‑228 (MQ=255)
                                                                                                                                 acggtgcgGTATGGAC‑GGGTTTACCGGAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGTATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATc                                                                                     <  2:157622/224‑1 (MQ=255)
                                                                                                                                   cgcggtgTAAGCAC‑GGGGGTCCCGGAGGAACTAAAAATTGGGGCTAAGTCATCGGAAAAATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCCCCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCAAAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGc                                                                                   <  2:438173/223‑1 (MQ=255)
                                                                                                                                   aGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACCAATGGGTACGACCACCAAGACAGTTGCGGCAATTACCACCGGGGATATGGCCCTcccccaaaaacgagccgc                                                                                   >  2:270889/1‑215 (MQ=255)
                                                                                                                                   aGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGCACAACACGACAATTGCGGCAATGCACACAGGCGATATGGCCTTCGCCAGAACCGCGATCGc                                                                                   >  1:352275/1‑229 (MQ=255)
                                                                                                                                     cggggTTTGCAC‑GGTTTTACCGAAGGGATAAAAAATTGGGGGTAAGTCACCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCGTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCg                                                                                 <  2:113033/226‑1 (MQ=255)
                                                                                                                                      cgggTATGCAG‑GGCGTTAACGAAGGGATCAAAAATTGCGGCGAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATAGTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGGACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGcc                                                                                  <  1:283524/225‑1 (MQ=255)
                                                                                                                                          tATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACCACAGTTGCGGCAATGACCCCAGGGGATATGGCCTTCGCCAGAAACGCGAACCCCGAACtt                                                                            >  2:271951/1‑229 (MQ=255)
                                                                                                                                           aTGCAC‑GGCTTTACCGAAGGGATCAAAAATTGCGGCTAATTCAGCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTg                                                                           <  1:373302/229‑1 (MQ=255)
                                                                                                                                                c‑GGCGTTACCGGAGGGATCAAAAATTGCGGCTAAGTCAGCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCAACAGATATTCGGCAAAGCAGGCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGc                                                                       <  1:270889/228‑1 (MQ=255)
                                                                                                                                                     gTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACAACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGGTCTTGAAGCCTTTc                                                                  >  1:375964/1‑229 (MQ=255)
                                                                                                                                                     gTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCAACCGTTTTGCGGCACAAAAGGGGCGGACCACCACGACAGTTGCGGCAATGACAACAGGGGAAATGGCCTCCGCACGAAAACCGATCGCCgcactcaaaaccttta                                                                  >  2:213819/1‑214 (MQ=255)
                                                                                                                                                       tACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTCCGACCACCACGACAGTTGCGGCCATGACCAAAGGAGATATGGCATCCCCCAGAAACCCGATCGCCAGTCTTACACCCtttaca                                                                >  2:657372/1‑226 (MQ=255)
                                                                                                                                                         ccGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCGATCGTGTTGCGGCACAAATGGGTAGGACCACCACCAAAGTTGCGGGAATGACCCCAGGGGATATGGCCTTCGCCAGCAACACGATCCCCGACTTTCAACCCTTTCACtt                                                              >  2:196790/1‑229 (MQ=255)
                                                                                                                                                              gggATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGGAAAGCAGCCCGGGCGCTTA‑ACACCAACGACTATCGTGTTTAGGTACAAATGGGGCAGACCACCACGACAGTTGCGGCGATGACCACAGGGGACAGGCGCTTCGCCCGAAACCGAATCGCCGAACTGCAAGACTTTCACTTCCTg                                                          >  2:293377/1‑228 (MQ=255)
                                                                                                                                                               gggtCAAAAATTGCGGTTAAGCCACCGGAAATATTGGCGGGGATTTTGAAGGCGTTGAAGGCCGGGACCACCAGATATTTGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTGTCGTGTTGCGGCACAAAGGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGAc                                                        <  2:665354/226‑1 (MQ=255)
                                                                                                                                                                tgtaaaaaaTCGCGGCTCAGTTGTAGGAAATATTGGCGGGGATTTTGAAGGGTGTAAAAGCCGGGATCCCCAGATATTCGGGAAGTCATCCCGGTCGAGTA‑ACACCAACGCCTATCGTGTTGCGGCATAAATGGGTACGCCCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTGCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGAc                                                        <  2:153723/224‑1 (MQ=255)
                                                                                                                                                                gATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGAc                                                        <  1:251101/228‑1 (MQ=255)
                                                                                                                                                                gATCAAAAATTGCGGCAAAGTCATCGGAAATATTGGCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTTCGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGTCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGAcc                                                       <  1:177452/229‑1 (MQ=255)
                                                                                                                                                                gATAAAAAATTGCGGTTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGACCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCAGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGAc                                                        <  1:71068/228‑1 (MQ=255)
                                                                                                                                                                 attaaaaaTTGCGGGTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATAGTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTg                                                                           <  1:284649/205‑1 (MQ=255)
                                                                                                                                                                 aTCAAAAATTGCGGCTAAGTCATCGGAAATTTGGTCGGGGATTTTGAAGGCGTGGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCa                                                      <  1:420146/229‑1 (MQ=255)
                                                                                                                                                                 aTCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACCGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCCGAAACACGATCGCCGATCTTAAAGCCTTTAAccgttctctta                                                      >  2:284649/1‑219 (MQ=255)
                                                                                                                                                                 aTCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGGGATATGGCCTTCGCCAGAAACACGACAGCCGACCTTGAAGcactcaacttccgcacc                                                       >  2:489028/1‑212 (MQ=255)
                                                                                                                                                                          tGCGGCAAAGTCATCGGAAATATTGTGGGGGATTTTGAAGGGTTTGAAGGCCGGGCCCCCCAGATTTTCGGCAAAGTAGCCCGGGGCATTA‑ACACCAACGCCTATCGTTTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAAtacctac                                              <  2:539434/228‑1 (MQ=255)
                                                                                                                                                                                ttagttacccgAAATTTTGTGGGGGATTTCGGAGGGGTTGAAGGCCGGGATCCCGAGGTATTCGGTAATGCAGCCCTGGCGATTC‑ACATCAACGCCTACCGTGTCGCGGCACAAATGGGTACGACCACCGCGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTACCCCTTCa                                       <  2:420325/219‑1 (MQ=255)
                                                                                                                                                                                  aGTCAGCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTACCACTTCAcc                                     <  1:4127/229‑1 (MQ=255)
                                                                                                                                                                                    tCATCGGAAATATTGGCGGGGATTTTGAAGGCGTTGAATGCCGGGATCCCCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTACCACTTCACCGa                                   <  1:634414/229‑1 (MQ=255)
                                                                                                                                                                                     cATCGGAAATATTGGCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTACCACTTCACCGAc                                  <  1:271951/229‑1 (MQ=255)
                                                                                                                                                                                     agattgttataagggacaggATTTTGAAGGCGTTAAATGCCGGGATCCCCAGAATTTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTACCACTTCACCGAc                                  <  2:259105/211‑1 (MQ=255)
                                                                                                                                                                                       gcGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTACCACTTCACCGACa                                 <  1:717050/227‑1 (MQ=255)
                                                                                                                                                                                                             tGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGCTGCGGCAATGACCACAGGTGATATGGCCTTCGCCCGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTACCACTTCACCGACATACTCATGGCCCACACCCATCgg          >  2:645733/1‑229 (MQ=255)
                                                                                                                                                                                                                   cGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTACCACTTCACCGAc                                  >  1:259105/1‑199 (MQ=255)
                                                                                                                                                                                                                    gTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTTTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTACCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCggg   <  1:489028/229‑1 (MQ=255)
                                                                                                                                                                                                                     ttGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCACTACCTACCACTTCACCGCCATATTCATGGCCCCCGACCCTCGACACCgggg  >  2:477981/1‑228 (MQ=255)
                                                                                                                                                                                                                                    |                                                                                                                                                                                                                      
GGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCA‑ACGTGTTTCGCCACCGCCGCTGCCAT‑AATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCACCAGATCAAA‑CGACAGCGCGGTATGCAC‑GGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTA‑ACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTACCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGA  >  NC_000913/3790744‑3791181

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A