Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A16 F20 I0 R1
|
52 |
51.1 |
1736300 |
96.9% |
1682474 |
149.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
CP009273 |
3,341,024 |
G→A |
9.6% |
R184H (CGC→CAC) |
yhbJ → |
adaptor protein RapZ for GlmZ/GlmY sRNA decay; glucosamine‑6‑phosphate regulated; NTPase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP009273 | 3,341,024 | 0 | G | A | 9.6%
| 158.2
/ 5.6
| 63 | R184H (CGC→CAC) | yhbJ | adaptor protein RapZ for GlmZ/GlmY sRNA decay; glucosamine‑6‑phosphate regulated; NTPase |
| Reads supporting (aligned to +/- strand): ref base G (25/31); new base A (2/4); total (28/35) |
| Fisher's exact test for biased strand distribution p-value = 6.89e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 |
ATACCTCAGAAATGTCCGTTCACGAGCTGGCTGAAATGCTGCGTACCCGTCTGCTGGGTAAACGTGAACGCGAACTGACCATGGTCTTTGAGTCTTTCGGCTTCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGATAAACCTGTCGCCGCGTTCCTCGACCGCCACACAGAAGTACACAATTTTATCTACCAGACGCGAAGCTATCTTGAGCTATGGTTACC > CP009273/3340877‑3341165
|
aTACCTCAGAAATGTCCGTTCACGAGCTGGCTGAAATGCTGCGTACCCGTCTGCTGGGTAAACGTGAACGCGAACTGACCATGGTCTTTGAGTCTTTCGGCTTCAAACACGGTATCCCTATCGATGCAGATTACGGCTTTGACCGgcgc > 2:255126/1‑149 (MQ=255)
cTCAGAAATGTCCGTTCACGAGCTGGCTGAAATGCTGCGTACCCGTCTGCTGGGTAAACGTGAACGCGGACTGACCATGGTCTTTGAGTCTTTCGGCTTCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCActtct > 1:645388/1‑149 (MQ=255)
tCAGAAATGTCCGTTCACGAGCTGGCTGAAATGCTGCGTACCCGTCTGCTGGGTAAACGTGAACGCGAACTGACCATGGTCTTTGAGTCTTTCGGCTTCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGcttctt > 2:7907/1‑149 (MQ=255)
tCAGAAATGTCCGTTCACGAGCGGGCTGAAATGCTGCGTACCCGTCTGCTGGGTAAACGTGAACGCGAACTAACCATGGTCTTTGAGTCTTTCGGCTTCAAACACGGTTGCTCACTCAATGCAGACTAAGGCTTTGACGTGCGcttctt > 1:827637/1‑149 (MQ=255)
gcgggaaTGTCCGTTGACGGGGTGGCTGAAATGCGGCGTACCCGTCTGCTGGGTAAACGTGAACGCGAACTGACCATGGTCTTTGAGTCTTTCGGCTTCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGcttctt < 1:206133/144‑1 (MQ=255)
agcaaTGTCCGTTCACGAGCTGGCTGAAATGCTGCGTACCCGTCTGCTGGGTAAACGTGAACGCGAACTGACCATGGTCTTTGAGTCTTTCGGCTTCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGc < 2:354135/146‑1 (MQ=255)
aGAAATGTCCGTTCACGAGCTGGCTGAAATGCTGCGTACCCGTCTGCTGGGTAAACGTGAACGCGAACTGACCATGGTCTTTGAGTCTTTCGGCTTCCAAAACGATAACCCTATCGATGCAGAATACGTCTTTGACGTGCGCTTCTTGc > 1:398786/1‑149 (MQ=255)
aGAAAGGTCCGTTCACGAGCTGGCTGAAATGCTGCGTACCCGTCTGCTGGGGAAACGTGAACGCGAACTGACCATGGTCTTTGAGTCTTTCGGCTTCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGc < 1:854314/149‑1 (MQ=255)
gAAATGGCCGTTCACGAGCTGGCTGAAATGCGGCGTCCCCGTCCGTTGGGTAAACGTGAACGCGAACTGACCATGGTCTTTGAGTCCTTCGGCCTCAAACACGGTACCCCTATGGATGCAGATTACGTCTTTGACGTGCGCTTCTTGcc < 1:543068/149‑1 (MQ=255)
tCCGTTCACGAGCTGGCTGAAATGCTGCGTACCCGTCTGCTGGGTAAACGTGAACGCGAACTGACCATGGTCTTTGAGTCTTTCGGCTTCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAAccc > 2:86326/1‑149 (MQ=255)
gTTCACGAGCTGGCTGAAATGCTGCGTACCCGTCTGCTGGGTAAACGTGAACGCGAACTGACCATGGTCTTTGAGTCTTTCGGCTTCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCa > 1:820709/1‑149 (MQ=255)
aGCTGGCTGAAATGCTGCGTACCCGTCGGCTGGGTAAACGTGAACGCGAACTGACCATGGTCTTTGAGTCTTTCGGCTTCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGAt < 2:605911/149‑1 (MQ=255)
gctgAAATGCTGCGTACCCGTCTGCTGGGTAAACGTGAACGCGAACTGACCATGGTCTTTGAGTCTTTCGGCTTCAAACACGGGATCAGTATCGATGCAGATGACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGaa > 1:650693/1‑149 (MQ=255)
aaaTGCTGCGTACCCGTCTGCTGGGTAAACGTGAACGCGAACTGACCATGGTCTTTGAGTCTTTCGGCTTCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTg < 1:474982/149‑1 (MQ=255)
tgctgcGTACCCGTCTGCTGGGTAAACGGGAACGCGAACTCACCATGGTCTTTGAGTCTTTCGGCTTCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGt < 1:687914/149‑1 (MQ=255)
tgctgcGTACCAGACTGCTGGGTAAACGTGAACGCGAACTGACCATGGTCTTTGAGTATTTCGGCCGCAAACACGGTATCCTTATCGATGCAGATTACGGCTTTGACGTGCCCTTCTTGCCGAACCCGCACTGGGATGCGACACTGAGt > 1:185666/1‑149 (MQ=255)
gctgcGTACCCGTCTGCTGGGTAAACGTGAACGCGAACTGACCATGGTCTTTGAGTCTTTCGGCTTCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTc < 1:663608/149‑1 (MQ=255)
gcGTACCCGTCTGCTGGGTAAACGTGAACGCGAACTGACCATGGTCTTTGAGTCTTTCGGCTTCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCaa < 1:634347/149‑1 (MQ=255)
ccGTCTGCTGGGTAAACGTGAACGCGAACTGACCATGGTCTTTGAGTCTTTCGGCTTCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAg > 2:370619/1‑149 (MQ=255)
ctgctgGGTAAACGTGAACGCGAACTGACCATGGTCTTTGAGTCTTTCGGCTTCAAACAAGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCt > 2:383189/1‑149 (MQ=255)
tgctgGGTAAACGTGAACGCGAACTGACCATGGTCTTTGAGTCTTTCGGCTTCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCtt < 2:65664/149‑1 (MQ=255)
gctgGGTAAACGTGAACGCGAACTGACCATGGTCTTTGAGTCTTTCGGCTTCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGTCAGGTCTTg < 2:78447/149‑1 (MQ=255)
ctgGGTAAACGTGAACGCGAACTGACCATGGTCTTTGAGTCTTTCGGCTTCAAACGCGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGa > 1:555592/1‑149 (MQ=255)
ctgGGTAAACGTGAACGCGAACTGACCATGGTCTTTGAGTCTTTCGGCTTCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGa < 2:364189/149‑1 (MQ=255)
ctgGGTAAACGTGAACGCGAACTGACCATGGTCTTTGAGTCTTTCGGCTTCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGa > 2:368401/1‑149 (MQ=255)
ctgGGTAAACGTGAACGCGAACTGACCATGGTCTTTGAGTCTTTCGGCTTCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGa > 2:799752/1‑149 (MQ=255)
tAAACGTGAACGCGAACTGACCATGGTTTTTGAGTCTTTCGGCTTCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGATAAAc < 1:691690/149‑1 (MQ=255)
tAAACGTGAACGCGAACTGACCATGGTCTTTGAGTCTTTCGGCTTCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGATAAAc < 2:29844/149‑1 (MQ=255)
aCGTGAACGCGAACTGACCATGGTCTTTGAGTCTTTCGGCTTCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGATAAACCTg > 2:14771/1‑149 (MQ=255)
cgcgAACTGACCATGGTCTTTGAGTCTTTCGGCTTCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGATACTGCGTCCAATGACAGGTCTTGATAAACCTGTcgccgc < 2:172078/149‑1 (MQ=255)
cgcgAACTGACCATGGTCGTTGCGTCCTTCTGCTTCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACTCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGATAAACCTGTcgccgc < 1:306957/149‑1 (MQ=255)
aCTGACCATGGTCTTTGAGTCTTTCGGCTTCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGATAAACCTGTCGCCGCGTTcc < 2:318605/149‑1 (MQ=255)
tGACCATGGTCTTTGAGTCTTTCGGCTTCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCCCACTGGGATCCGAAACTCCGTCCAATCACAGGGCTTGATAAACCTTTCTCCGCGTTCCTc > 1:440501/1‑149 (MQ=255)
ccttgTCTTTCAGTCTTTCGGCTTCAAACACGGTATCCCCATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGATAAACCTGTCGCCGCGTTCCTCGAcc < 2:135513/145‑1 (MQ=255)
cATTGTCTTTTAGTCTTTCGGCTTCAAACCCGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGATAAACCTGTCGCCGCGTTCCTCGAcc < 1:683139/149‑1 (MQ=255)
cATGGTCTTTGGGTCTGCCGGCCTCCAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGATAAACCTGTCGCCGCGTTCCTCGAcc < 2:318883/149‑1 (MQ=255)
aTGGTCTTTGAGTCTTTCGGCTTCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGATAAACCTGTCGCCGCGTTCCTCGACCg < 1:707910/149‑1 (MQ=255)
tGGTCTTTGAGTCTTTCGTCTTCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTAGATAAACCTGTCGCCGCCGTCCACGACCGc > 1:557586/1‑149 (MQ=255)
gTCTTTCGGTTTCAAACACGGTACCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGATAAACCTGTCGCCGCGTTCCTCGACCGCCACACAGAAg < 1:425572/149‑1 (MQ=255)
tttCGGCTTCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCACTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGATAAACCTGTCGCCGCGTTCCTCGACCGCCACACAGAAGTac < 2:103269/149‑1 (MQ=255)
tttCGGCTTCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCACTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGATAAACCTGTCGCCGCGTTCCTCGACCGCCACACAGAAGTac < 2:621619/149‑1 (MQ=255)
tgtcgccctCAAACACGGTCTCCCTATCGATGCAGTTTACGGCTTCGACGTGCACTTCTGGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATCACAGGCCTTGATACACCTGTCGCCGCGTTCCTCGACCGCCACACAGAAGTac < 1:277285/141‑1 (MQ=255)
ttCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGATAAACCTGTCGCCGCGTTCCTCGACCGCCACACAGAAGTACACAAttt > 1:671998/1‑149 (MQ=255)
ttCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGATAAACCTGTCGCCGCGTTCCTCGACCGCCACACAGAAGTACACAAttt > 1:547296/1‑149 (MQ=255)
ttCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGATAAACCTGTCGCCGCGTTCCTCGACCGCCACACAGAAGTACACAAttt > 2:570425/1‑149 (MQ=255)
ttCAAACACGGTATCCCTATCGATGCAGATTACCTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGATAAACCTGTCGCCGCGTTCCTCGACCGCCACACAGAAGTACACAAttt > 2:556334/1‑149 (MQ=255)
tCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGATAAACCTGTCGCCGCGTTCCTCGACCGCCACACAGAAGTCAACCAtttt > 1:155240/1‑149 (MQ=255)
cAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGATAAACCTGTCGCCGCGTTCCTCGACCACCACCCAGAAGTAAACCAttcac > 1:162717/1‑146 (MQ=255)
aaaCACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTTATAAACCTGTCGCCGCGTTCCTCGACCGCCACACAGAAGTACACAATTTTAt > 1:482262/1‑149 (MQ=255)
acacGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGATAAACCTGTCGCCGCGTTCCTCGACCGCCACACAGAAGTACACAATTTTATCt > 2:2212/1‑149 (MQ=255)
acacGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCACTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGATAAAACTGTCGCCGCGTTCCTCGACCGCCACACAGAAGTACACAATTTTATCt > 2:283522/1‑149 (MQ=255)
acGGTATCCCTTTCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGATAAACCTGTCGCCGCGTTCCTCGACCGCCACACAGAAGTACACAATTTTATCTAc < 1:504295/149‑1 (MQ=255)
acGGTACCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGATAAACCTGTCGCCGCGTTCCTCGACCGCCACACAGAAGTACACAATTTTATCTAc < 2:283442/149‑1 (MQ=255)
acccctacgaaTGCTGTTTATGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGTATCCGAAACTGCGTCCAATGACAGGTCTTTATAAACCTGTCGCCGCGTTCCTCGACCGCCACACAGAAGTACACAATTTTATCTACCAGAc < 1:629301/139‑1 (MQ=255)
aTCCGTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAATCTGCGTCCAATGACAGGTCTTGATAAACCTGTCGCCGCGTTCCTCGACCGCCACACAGAAGTACACAATTTTATCTACCAGAc < 1:647586/149‑1 (MQ=255)
ccccTTTCGATGCCGATTACGTCCTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATCACCGGTCTTGATAAACCTGTCGCCGCGTTCCTCGACCGCCACACAGAAGTACACAATTTTATCTACCAGAcg < 1:696328/148‑1 (MQ=255)
cccTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGATAAACCTGTCGCCGCGTTCCTCGACCGCCACACAGAAGTACACAATTTTATCTACCAGAcgc < 2:737097/149‑1 (MQ=255)
cTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGATAAACCTGTCGCCGCGTTCCTCGACCGCCACACAGAAGTACACAATTTTATCTACCAGACGCGa < 2:180250/149‑1 (MQ=255)
ttACGTCTTGGACGTGCACTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGATAAACCTGTCGCCGCGTTCCTCGACCGCCACACAGAAGTACACAATTTTATCTACCAGACGCGAAGCTATCTTGAGc < 2:683698/149‑1 (MQ=255)
gTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGCCTTGATAAACCTGTCGCCGCGTTCATAGACTGACACACAGAAGTACACAATTTTATCTACCAGACGCGAAGCTACCTTGAGCTagg > 2:812539/1‑147 (MQ=255)
ccTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGATAAACCTGTCGCCGCGTTCCTCGACCGCCACACAGAAGTACACAATTTTATCTACCAGACGCGAAGCTATCTTGAGCTATgg > 1:518707/2‑149 (MQ=255)
ttGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGATAAACCTGTCGCCGCGTTCCTCGACCGCCACACAGAAGTACACAATTTTATCTACCAGACGCGAAGCTATCTTGAGCTATGGTTa > 2:35644/1‑149 (MQ=255)
tGACGTGCGCCTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGATAAACCTGTCGCCGCGTTCCTCGACCGCCACACAGAAGTACACAATTTTATCTACCAGACGCGAAGCTATCTTGAGCTATGGTTAc < 1:126058/149‑1 (MQ=255)
gACGTGCGCTCCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGATAAACCTGTCGCCGCGTTCCTCGACCGCCACACAGAAGTACACAAGTTTATCTACCAGACGCGAAGCTATCTTGAGCTATGGTTAcc < 1:745531/149‑1 (MQ=255)
|
ATACCTCAGAAATGTCCGTTCACGAGCTGGCTGAAATGCTGCGTACCCGTCTGCTGGGTAAACGTGAACGCGAACTGACCATGGTCTTTGAGTCTTTCGGCTTCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGATAAACCTGTCGCCGCGTTCCTCGACCGCCACACAGAAGTACACAATTTTATCTACCAGACGCGAAGCTATCTTGAGCTATGGTTACC > CP009273/3340877‑3341165
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
