Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F174 I0 R1
|
55 |
81.0 |
1740380 |
95.7% |
1665543 |
141.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| JC |
CP000730 |
2,709,677 |
Δ12 bp |
94.7% |
coding (1239‑1250/1812 nt) |
USA300HOU_2562 ← |
possible acetyltransferase |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
CP000730 |
= 2709676 | 4 (0.050) | 81 (1.090) |
61/260 |
NT |
94.7% |
coding (1251/1812 nt) |
USA300HOU_2562 |
possible acetyltransferase |
| ? | CP000730 |
2709689 = |
5 (0.070) | coding (1238/1812 nt) |
USA300HOU_2562 |
possible acetyltransferase |
AGTAAAGACATTACCAATATCCACCATGACCGAGTCACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/2709538‑2709676
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATAACTAACACTGTTCTAGCAAATTGCCCCTTCTTTTTAGGTAAAAATGCAAAAG > CP000730/2709689‑2709827
AGTAAAGACATTACCAATATCCACCATGACCGAGTCACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATT > 1:642801/1‑141
AAGACATTACCAATCTCCACCATGACCGAGTCACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTGGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGAC‑TTTTTCTTCGTTGTTTTTTTCTCT‑T > 2:592673/1‑141
AGATATTACCTATATCCACCATGTCCGAGTCACCAATGAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTGAACGCCTTTTTTCTTCGTTGTTTTATTCCCT‑T < 2:18292/141‑1
AGACCTTACCAATATCCACCATGCCCGAGTCACCTATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑T < 2:29561/141‑1
AGACATTATCAATATCCACCATGACCGAGTCACCAATTACTAGTGGTGATGACTTTTTAATTTCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑T < 2:574324/141‑1
GACATTACCAATATCCACCATGACCGAGTCACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TT > 2:202783/1‑141
GACATTACCAATATCCACCATGACCGAGTCACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TT < 1:72472/141‑1
CATTACCAATATCCCCCATGACCGAGTCACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCT < 1:533383/141‑1
ATTACCAATATCCACCATGACCGAGTCACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTTTTTTATTCTCT‑TTCTT > 1:99306/1‑141
ATTACCAATATCCACCATGACCGAGTCACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTT > 2:862375/1‑141
ATTACCAATATCCACCATGACCGAGTCACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTCTTTTATTCTCT‑TTCTT > 2:499356/1‑141
CAATATCCACCCTGACCGAGTCACCAATTAATAGTGGTGATGACTTTTTACTATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTACCGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGG < 1:282892/141‑1
CAATATCCACCATGACCGAGTCACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGG < 1:543985/141‑1
AATATCCACCATGACCGAGTCACCAATTAATAGTGGTGATGACTTTTTAATATCGTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGC > 1:561554/1‑141
AATATCCACCATGACCGAGTCACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGC > 1:90318/1‑141
AATATCCACCATGACCGAGTCACAACTTAATAGTGGTGATGACTTTTTAATATCCTCTTTTCTATTCCCTGTCTGCTTATCATCTTGCTTATCTTTTTTGACGACTTTTTTCTTTCTTGGTTTATTCTCT‑TTTTTtttgct > 1:165545/1‑135
ATCCACCATGACCGAGTCACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTC < 1:720998/141‑1
TCCACCATGACCGAGTCACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCt > 1:96584/1‑140
cctCCATGACCGAGTCACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCAT < 2:287350/138‑1
ACCATGACCGAGTCACCAATTAATAGTGGTGAGGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGT > 1:858581/1‑141
CCATGACTGAGTCACCAATTTCTGGTTGTGATGACTTTTTAATCTCCTCTTTGCTATTCACTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTT < 2:517153/141‑1
CCATGACCGAGTCACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTT > 1:789169/1‑141
ATGACCGAGTCACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGT < 1:305965/141‑1
ATGACCGAGTCACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGT < 2:379905/141‑1
CGAGTCACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGTCTTTTTTCTTCTTTGTTTTATTATCT‑TTATTCTCGGCATCATGTCGTTTGaa > 2:590753/1‑139
GAGTCACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCA > 1:173439/1‑141
ACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGC > 2:664403/1‑141
CCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCc > 1:122858/1‑140
CCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCA > 1:179592/1‑141
CCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCACTGTCTGATTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTATCGGCTTCATATTGTTTGCCAAGTGCA > 2:713245/1‑141
TTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAA > 1:498662/1‑141
AATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATACTATGGCTTATATTTTGTATTGACTTTTTTCTTCGTTGTTTTATTCTCT‑TGCTTCTCGGCTTCATGTTTTTTGCCAAGTGCATCAAAC > 1:855127/1‑141
ATAGTGGTTATGACTTTTTATTATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACT < 2:488144/141‑1
ATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACT < 1:37650/141‑1
AGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGT < 1:251818/141‑1
GTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTTTTTTTTTTTTTCTTCGTTGTTTTATTCTCT‑TTTTTCTCGGCTTCATGTTGTTTTCCAAGTGCGTCttcctgtc > 2:491902/1‑133
GGTGATGCCTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCCTTGTTTCTTTCTCT‑CTCAAATCTCGTTCATGTTGATTGCCAAGTGCATTTAACTGTCCA < 1:633899/141‑1
TGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACT > 1:538374/1‑141
TGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAG > 1:857319/1‑141
TGACTTTTTAAGATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAG < 1:4254/141‑1
TGACTTTGTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCACACTGTCCACTTAG > 1:542753/1‑141
GACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTATTCAAGCTACGTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGC < 1:630017/141‑1
tCTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCA < 2:745355/140‑1
ACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTGTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCA < 2:640268/141‑1
CTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTACACTGAGCAC > 2:465876/1‑141
TTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAA < 2:687768/141‑1
TTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACG > 2:784551/1‑141
TAATTTCCTCCTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGA < 1:276163/141‑1
TAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGA < 1:614249/141‑1
TAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGA < 1:494934/141‑1
ATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATA < 2:702261/141‑1
TATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAG < 2:173439/141‑1
tTCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGA < 2:552713/140‑1
TCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGAC < 2:642801/141‑1
TCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGAC > 1:445027/1‑141
cttTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGCCTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGG < 2:247139/138‑1
CTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAAT > 1:678980/1‑141
tTTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAA < 1:653590/140‑1
ATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAA > 1:683138/1‑141
TTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCCTCAAACTGTCCACTGCGCACAACGATAGACGGAACCAATAAT > 1:31414/1‑141
TCGCTGTTTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATA < 1:420086/141‑1
CGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTT‑TACGATGGTCTGCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAG < 1:199496/141‑1
GCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCACTAATAGG > 2:330925/1‑141
GTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATA < 1:81247/141‑1
GTCTGCTTATCCTCTTGCTTATCTGTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATA > 1:553441/1‑141
TCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGATGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATAA > 1:166403/1‑141
CTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATAACTAA > 1:769981/1‑141
TTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCTTCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATAACTAAC < 2:431503/141‑1
TTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATAACTAAC < 2:526827/141‑1
CTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATAACTAACACTGTTC < 2:722583/141‑1
ATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATAACTACAACTGTTCTAGCAAA > 2:2545/1‑141
ATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATAACTAACACTGTTCTAGCAAA > 1:674457/1‑141
TCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATAACTAACACTGTTCTAGCAAAT > 1:315364/1‑141
TCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATAACTAACACTGTTCTAGCAAAT > 1:671831/1‑141
TCTTTTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATAACTAACACTGTTCTAGCAAAT > 1:747849/1‑141
TTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATAACTAACACTGTTCTAGCAAATCGCC < 1:119849/141‑1
TTTTAACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCCTCATGGTGGTTGCAAAGTAAATCAGCCTTTGCACTGAGATCATCGATATACGGAACCAATAATAGGATAACTAACACTGTTCTAGCAAATTGCC < 1:202783/141‑1
TAACGACTTTTTACTTCCTTGTTTTATTCCCT‑TTCTTCTCGGCTACCAGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATAACTAACACTGTTCTAGCAAATTGCCCCT < 2:216933/141‑1
AACGACTTTTTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATAACTAACACTGTTCTCGCAAATTGCCCCTT > 1:512026/1‑141
TTTTCTCTTCGTTGTTTTATTCTCG‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGTCGGAACCAATAATAGGATAACTAACACTGTTCTAGCAAATTGCCCCTTCTTTTT < 1:334345/141‑1
TTTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATAACTAACACTGTTCTAGCAAATTGCCCCTTCTTTTTAGG > 1:849624/1‑141
TTCTTCGTTGTTTTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATAACTAACACTGTTCTAGCAAATTGCCCCTTCTTTTTAGGT < 2:23509/141‑1
TTATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATAACTAACACTGTTCTAGCAAATTGCCCCTTCTTTTTAGGTAAAAATGCAAAA > 1:861364/1‑141
TATTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATAACTAACACTGTTCTAGCAAATTGCCCCTTCTTTTTAGGTAAAAATGCAAAAG < 1:664403/141‑1
AGTAAAGACATTACCAATATCCACCATGACCGAGTCACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/2709538‑2709676
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCTCT‑TTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATAACTAACACTGTTCTAGCAAATTGCCCCTTCTTTTTAGGTAAAAATGCAAAAG > CP000730/2709689‑2709827
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
|---|
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |
GATK/CNVnator alignment
N/A
