Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A13 F191 I0 R1 47 68.0 1456600 97.2% 1415815 140.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 454,656 G→A 100% V119I (GTT→ATT)  set23 → staphylococcal exotoxin

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP000730454,6560GA98.4% 167.2 / ‑4.7 61V119I (GTT→ATT) set23staphylococcal exotoxin
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base A (23/37);  minor base T (1/0);  total (24/37)
Fisher's exact test for biased strand distribution p-value = 3.93e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.86e-01
Rejected as polymorphism: E-value score below prediction cutoff.
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

TTTTTAACCAACAAAATCAAAAGTTCCAAGTGTTTTTATTGGGAAAAGATGAAAATAAATACAAAGAAAAAACACATGGTTTAGATGTCTTTGCGGTACCAGAATTAGTAGATTTAGATGGAAGAATATTTAGTGTTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGAACGCCGAACTTACTAGTTAAAAAAATAGACGATAAAGACGGTTTTTCTATTGATGAATTTTTCTTTATTCAAAAGGAAGAAGT  >  CP000730/454522‑454789
                                                                                                                                      |                                                                                                                                     
tttttAACCAACAACATCACAAGTTCCAAGTTTTTTTATTGGGAAAAGATGAAAATAAATACAAAGAAAAAACACATGGTTTAGATGTCTTTGCGGTACCAGAATTAGTAGATTTAGATGGAAGAATATttagtattagt                                                                                                                                  <  1:130372/140‑1 (MQ=255)
      aCCAACAAAATCAAAAGTTCCAAGTGTTTTTATTGGGAAAAGATGAAAATAAATACAAAGAAAAAACACATGGTTTAGATGTCTTTGCGGTACCAGAATTAGTAGATTTAGATGGAAGAATATTTAGTATTAGTGGTGTa                                                                                                                            <  2:290351/140‑1 (MQ=255)
        caacaaAATCAAAAGTTCCAAGTGTTTTTATTGGGAAAAGATGAAAATAAATACAAAGAAAAAACACATGGTTTAGATGTCTTTGCGGTACCAGAATTAGTAGATTTAGATGGAAGAATCTTTAGTATAACTGGAGTAAc                                                                                                                          >  1:357190/1‑140 (MQ=255)
           caaAATCAAAAGTTCCAAGTGTTTTTATTGGGAAAAGATGAAAATAAATACAAAGAAAAAACACATGGTTTAGATGTCTTTGCGGTACCAGAATTAGTAGATTTAGATGGAAGAATATTTAGTATTAGTGGTGTAACaaa                                                                                                                       <  1:657274/140‑1 (MQ=255)
             aaaTCAATAGTTCCAAGTGTGTTTATTGGGAAAAGATGAAAATAAATACAAAGACAAAACACATGGTTTAGATGTCTTTGCGGTACCAGAATTAGAAGATCTAGATGGAAGAATATTAAGTATTAGTGGTGTAACAAAGa                                                                                                                     >  1:458850/1‑140 (MQ=255)
              aaTCAAAAGTTCCAAGTGTTTTTATTGGGAAAAGATGAAAATAAATACAAAGAAAAAACACATGGTTTAGATGTCTTTGCGGTACCAGAATTAGTAGATTTAGATGGAAGAATATTTAGTATTAGTGGTGTAACAAAGaa                                                                                                                    >  2:549935/1‑140 (MQ=255)
                tCAAAAGTTCCAAGTGTTTTTATTGGGAAAAGATGAAAATAAATACAAAGAAAAAACACATGGTTTAGATGTCTTTGCGGTACCAGAATTAGTAGATTTAGATGGAAGAATATTTAGTATTAGTGGTGTAACAAAGaaaa                                                                                                                  >  2:198397/1‑140 (MQ=255)
                 cAAAAGTTCCAAGTGTTTTTATTGGGAAAAGATGAAAATAAATACAAAGAAAAAACACATGGTTTAGATGTCTTTGCGGTACCAGAATTAGTAGATTTAGATGGAAGAATATTTAGTATTAGTGGTGTAACAAAGaaaaa                                                                                                                 >  2:416169/1‑140 (MQ=255)
                 cAAAAGTTCCAAGTGTTTTTATTGGGAAAAGATGAAAATAAATACAAAGAAAAAACACATGGTTTAGATGTCTTTGCGGTACCAGAATTAGTAGATTTAGATGGAAGAATATTTAGTATTAGTGGTGTAACAAAGaaaaa                                                                                                                 >  2:584519/1‑140 (MQ=255)
                    aaGTTCCAAGTGTTTTTATTGGGAAAAGATGAAAATAAATACAAAGAAAAAACACATGGTTTAGATGTCTTTGCGGTACCAGAATTAGTAGATTTAGATGGAAGAATATTTAGTATTAGTGGTGTAACAAAGAAAAACGt                                                                                                              <  2:513156/140‑1 (MQ=255)
                        tCCAAGTGTTTTTATTGGGAAAAGATGAAAATAAATACAAAGAAAAAACACATGGTTTAGATGTCTTTGCGGTACCAGAATTAGTAGATTTAGATGGAAGAATATTTAGTATTAGTGGTGTAACAAAGAAAAACGTaaaa                                                                                                          <  1:456413/140‑1 (MQ=255)
                        tCCAAGTGTTTTTATTGGGAAAAGATGAAAATAAATACAAAGAAAAAACACATGGTTTAGATGTCTTTGCGGTACCAGAATTAGTAGATTTAGATGGAAGAATATTTAGTATTAGTGGTGTAACAAAGAAAAACGTaaaa                                                                                                          <  1:244279/140‑1 (MQ=255)
                          cAAGTGTTTTTATTGGGAAAAGATGAAAATAAATACAAAGAAAAAACACATGGTTTAGATGTCTTTGCGGTACCAGAATTAGTAGATTTAGATGGAAGAATATTTAGTATTAGGGGTGTGACAAAGAAAACGGTAAAGTc                                                                                                        >  2:232986/1‑140 (MQ=255)
                          cAAGTGTTTTTATTGGGAAAAGATGAAAATAAATACAAAGAAAAAACACATGGTTTAGATGTCTTTGCGGTACCAGAATTAGTAGATTTAGATGGAAGAATATTCAGTATTAGTGGTGTAACAAAGAAAAACGTAAAATc                                                                                                        <  1:251720/140‑1 (MQ=255)
                                      atGGGAAAAGATGAAAATAAATACAAAGAAAAAACACATGGATTAGATGTCTTTGCGGTACCATAATTAGTAGATTTAGAAGGAAGAATATTTAGTATTAGGGGTGTAACAGAGAAAAACGTAAAATCAATATTTGAgac                                                                                            >  2:286224/2‑138 (MQ=255)
                                             aaaattaaaaTAAATACAAAGAAAAAACACATGGTTTAGATGTCTTTGCGGTACCAGAATTAGTAGATTTAGATGGAAGAATATGTAGTATTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGa                                                                                     <  1:120729/134‑1 (MQ=255)
                                             aaGATGAAAATAAATACAAAGAAAAAACAAATGGTTTAGATCTCTTTACTGATCCGGAATTAGTAGATTTAGATGGAAGAATATTTAGTATTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGa                                                                                     <  1:164311/140‑1 (MQ=255)
                                              cgATGAAATTAAATACAAAGAAAAAACACATGGTTTAGATGTCTTTGCGGTACAAGAATTAGTAGATTTAGATGGAAGAATATATAGTATTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTagaaa                                                                                    >  2:28378/2‑136 (MQ=255)
                                              aaataaaaaaaaaTACAAAGAAAAAACACATGGTTTAGATGTCTTTGCGGTACCAGAATTAGTAGATTTAGATGGAAGAATATTTAGTATTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGaa                                                                                    <  2:623047/135‑1 (MQ=255)
                                              aGATGAAAATAAATACAAAGAAAAAACACATGGTTTAGATGTCTTTGCGGTACCAGAATTAGTAGATTTAGATGGAAGAATATTTAGTATTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGaa                                                                                    <  1:326347/140‑1 (MQ=255)
                                              aGATGAAAATAAATACAAAGAAAAAACACATGGTTTAGATGTCTTTGCGGTACCAGAATTAGTAGATTTAGATGGAAGAATATTTAGTATTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGaa                                                                                    <  2:723100/140‑1 (MQ=255)
                                               gATGAAAATAAATACAAAGAAAAAACACATGGTTTAGATGTCTTTGCGGTACCAGAATTAGTAGATTTAGATGGAAGAATATTTAGTATAAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAGGaaa                                                                                   >  1:627897/1‑139 (MQ=255)
                                                attaaaaTAAATACAAAGAAAAAACACATGGTTTAGATGTCTTTGCGGTACCAGAATTAGTAGATTTAGATGGAAGAATATTTAGTATTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGAACg                                                                                  <  1:698398/137‑1 (MQ=255)
                                                           taCAAAGAAAAAACACATGGTTTAGATGTCTTTGCGGTACCAGAATTAGTAGATTTAGATGGAAGAATATTTAGTATTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGAACGCCGAACTTACt                                                                       <  1:275866/140‑1 (MQ=255)
                                                           aaaaaaGAAAAAACACATGGTTTAGATGTCTTTGCGGTACCAGAATTAGTAGATTTAGATGGAAGAATATTTAGTATTAGTGGTATAACAAAGAAAACCTTAAAATCAATATTTGAGTCTCTAAGAACGCCGAACTTACt                                                                       <  2:662624/137‑1 (MQ=255)
                                                             cAAAGAAAAAACACATGGTTTAGATGTCTTTGCGGTACCAGAATTAGTAGATTTAGATGGAAGAATATTTAGTATTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGAACGCCGAACTTACTAg                                                                     <  1:92188/140‑1 (MQ=255)
                                                               gaGAAAATGCACATGGTTTAGATGTCTTTGCGGTACCAGAATTAGTAGATTTAGATGGAAGAATATTTAGTATTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGAACGCCGAACTTACTAGtt                                                                   <  1:673327/139‑1 (MQ=255)
                                                                    aaaaCAGATGGTTTAGATGTCATTGCGGTACCAGAATTAGTAGATATAGATGGAAGAATATTTAGTAATAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGAACGCCGAACTTACTAGTTaaaaa                                                              <  2:81212/140‑1 (MQ=255)
                                                                     aaaCACATGGTTTAGATGTCTTTGCGGTACCAGAATTAGTAGATTTAGATGGAAGAATATTTAGTATTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGAACGCCGAACTTACAAGTTaaaaaa                                                             >  1:458685/1‑140 (MQ=255)
                                                                       acacATGGTTTAGATGTCTTTGCGGTACCAGAATTAGTAGATTTAGATGGAAGAATATTTAGTATTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGAACGCCGAACTTACTAGTTAAAAAAAt                                                           >  1:690689/1‑140 (MQ=255)
                                                                         acaTGGTTTAGATGTCTTTGCGGTACCAGAATTAGTAGATTTAGATGGAAGAATATTTAGTATTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTTAGTCTCTAAGAACGCCGAACTTACTAGTTAAAAAAATAg                                                         >  1:260716/1‑140 (MQ=255)
                                                                                  aGATGTCTTTGCGGTACCAGAATTAGTAGATTTAGATGGAAGAATATTTAGTAGTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAATAACGCCGAACTTACTAGTGAATAAAATAGACGATAAAg                                                <  1:406472/140‑1 (MQ=255)
                                                                                    aTGTCTTTGCGGTACCAGAATTAGTAGATTTAGATGGAAGAATATTTAGTATTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGAACGCCGAACTTACTAGTTAAAAAAATAGACGATAAAGAc                                              <  1:549935/140‑1 (MQ=255)
                                                                                      ggcattGCGGCACCAGAATTAGTAGATTTAGATGGAAGAATATTTAGTATCAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGAACGCCGCACTTACTAGTTAACAAAATAGACGATAAAGACgg                                            <  1:322463/136‑1 (MQ=255)
                                                                                      gTCTTTGCGGTACCATAATTAGTAGATTTAGATGGAAGAATATTTAGTATTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGAACGCCGAACTTACTAGTTAAAAAAATAGACGATAAAGACgg                                            <  1:63280/140‑1 (MQ=255)
                                                                                      gTCTTTGCGGTACCAGAATTAGTAGATTTAGATGTAAGAATATTTAGTATTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGAACGCCGAACTTACTAGTTAAAAAAATAGACGATAAAGACgg                                            <  1:288890/140‑1 (MQ=255)
                                                                                      gTCTTTGCCGTACCAGAATTAGAAGATTTAGATCGAAGAATATTTAGTATTAGTGGTGTAACAAAGAAAAACGTAAAATCAACATTTGAGTCTCTAAGAACGCCGAACTTACTAGTTAAAAAAATAGACGATAAAGACgg                                            <  1:422005/140‑1 (MQ=255)
                                                                                       tCTTTGCGGTACCAGAATTAGTAGATTTGGATGGAAGAATATTTAGTATTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGAACGCCGAACTTACTAGTTAAAAAAATAGACGATAAAGACGGt                                           >  2:248940/1‑140 (MQ=255)
                                                                                       tCTTTACGGTACCAGAATTAGTAGATTTAGATGGAAGAATAGTTAGTATTGGTGGTGTAACAAAGCAAAACGTAAAATAACTATTGGAATGTCTAAGAACGACGAAATTACTACTTAACAAAATAAACGATAAAGAccgc                                           >  2:134576/1‑137 (MQ=255)
                                                                                         tttGCGGTACCAGAATTAGTAGATTTAGATGGAAGAATATTTAGTATTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTATCTAAGAACGCCGAACTTACTAGTTAAAAAAATAGACGATAAAGACGGttt                                         >  2:473346/1‑140 (MQ=255)
                                                                                             cGGTACCAGAATTAGTAGATTTAGATGGAAGAATATTTAGTATTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGAACGCCGAACTTACTAGTTAAAAAAATAGACAGTAAAAACGGATTTTca                                     >  1:344147/1‑139 (MQ=255)
                                                                                                  ccAGAATTAGTAGATTTAGATGGAAGAATATTTAGTATTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGAACGCCGAACTTACTAGTTAAAAAAATAGACGATCAAGACGGTTTTTCTATtga                                <  1:435695/140‑1 (MQ=255)
                                                                                                  ccAGAATTAGTAGATTTAGATGGAAGAATATTTAGTATTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGAACGCCGAACTTACTAGTTAAAAAAATAGACGATAAAGACGGTTTTTCTATtga                                <  1:114243/140‑1 (MQ=255)
                                                                                                    aGAATTAGTAGATTTAGATGGAAGAATATTTAGTATTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGAACGCCGAACTTACTAGTTAAAAAAATAGACGATAAAGACGGTTTTTCTATtgatg                              <  1:577025/140‑1 (MQ=255)
                                                                                                    aGAATTAGTAGATTTAGATGGAAGAATATTTAGTATTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGAACGCCGAACTTACTAGTAAAAAAAATAGACGATAAAGACGGTTTTTCTATtgatg                              <  2:232911/140‑1 (MQ=255)
                                                                                                      aaTTAGTAGATTTAGATGGAAGAATATTTAGTATCAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGAACGCCGAACTTACTAGTTAAAAAAATAGACGATAAAGACGGTTTTTATATTGATGaa                            >  1:103304/1‑140 (MQ=255)
                                                                                                         tagtagATTTAGATGGAAGAATATTGCGATGCAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGAACGCCGAACTTACTAGTTAAAAAAATAGACGATAAAGACGGATTTTCTATTGATGAAttt                         >  1:352850/1‑140 (MQ=255)
                                                                                                          agtagATTTATATGGAAGAATATTTAGTAATAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGAACGCCGAAATAAATAATAAAAAAAATAGACGATAAAGACGGTTTTTCTATTGATGAAtttt                        <  2:375225/140‑1 (MQ=255)
                                                                                                          agtagATTTAGATGGAAGAATATTTAGTATTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGAACGCCGAACTTACTAGTTAAAAAAATAGACGATAAAGACGGTTTTTCTATTGATGAAtttt                        <  2:356104/140‑1 (MQ=255)
                                                                                                            tagATTTAGATGGAAGAATATTTAGTATTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGAACGCCGAACTTACTAGTTAAAAAAATAGACGATAAAGACGGTTTTTCTATTGATGAATTTTTc                      >  2:448619/1‑140 (MQ=255)
                                                                                                              gATTTAGATGGAAGAATATTTAGTATTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGAACGCCGAACTTACTAGTTAAAAAAATAGACGATAAAGACGGTTTTTCTATTGATGAATTTTTCtt                    <  1:416654/140‑1 (MQ=255)
                                                                                                               ttttAGATGGAAATATATTTAGTATTAGTGGTGTAACAAAGAAAAACGTAAAACGAATATTTGAGACTAAAAGAAAGCCGTACTTACTAGTTAAAAAAATAGACGATAAAGACGGTTTTTCTATTGATGAATTTTTCttt                   <  1:28378/139‑1 (MQ=255)
                                                                                                                  tAGATGGAAGAATATTTAGTATTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGAACGCCGAACTTACTAGTTAAAAAAATAGACGATAAAGACGGTTTTTCTATTGATGAATTTTTCTTTAtt                <  1:198397/140‑1 (MQ=255)
                                                                                                                   aGATGGAAGAATATTTAGTATTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGAACGCCGAACTTACTAGTTAAAAAAATAGACGATAAAGACGGTTTTTCTATTGATGAATTTTTCTTTATTc               >  1:68770/1‑140 (MQ=255)
                                                                                                                       ggAAGAATATTTAGTATTAGTAGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGAACGCCGAACTTACTAGTTAAAAAAATAGACGATAAAGACGGTTTTTCTATTGATGAATTTTTCTTTATTCaaaa           <  1:498941/140‑1 (MQ=255)
                                                                                                                        gaagaaTATTTAGTATTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGAACGCCGAACTTACTAGTTGAAAAAATAGACGATAAAGACGGTTTTTCTATTGATGAATTTTTCTTTATTCAAAAg          >  2:256937/1‑140 (MQ=255)
                                                                                                                          agaaTATTTAGTATTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGAACGCCGAACTTACTAGTTAAAAAAATAGACGATAAAGACGGTTTTTCTATTGATGAATTTTTCTTTATTCAAAAGga        >  1:313893/1‑140 (MQ=255)
                                                                                                                          agaaTATTTAGTATTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGAACGCCGAACTTACTAGTTAAAAAAATAGACGATAAAGACGGTTTTTCTATTGATGAATTTTTCTTTATTAAAAAGga        >  1:654052/1‑140 (MQ=255)
                                                                                                                             atatTTAGTATGAGTGGTTTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGAACGCCGAACTTACTAGTTAAAAAAATAGACGATAAAGACGGTTTTTCTATTGATGAATTTTTCTTTATTCAAAAGgaaga     <  2:140119/140‑1 (MQ=255)
                                                                                                                              tatTTAGTATTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGAACGTCGAACTTACTAGTTAAAAAAATAGACGATAAAGACGGTTTTTCTATTGATGAATTTTTCTTTATTCAAAAGgaagaa    <  1:193960/140‑1 (MQ=255)
                                                                                                                                ttttGTATTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGAACGCCGAACTTACTAGTTAAAAAAATAGACGATAAAGACGGTTTTTCTATTGATGAATTTTTCTTTATTCAAAAGGAAGAAgt  <  2:357190/140‑1 (MQ=255)
                                                                                                                                tttAGTATTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGAACGCCGAACTTACTAGTTAAAAAAATAGACGATAAAGACGGTTTTTCTATTGATGAATTTTTCTTTATTCAAAAGGAAGAAgt  <  1:448619/140‑1 (MQ=255)
                                                                                                                                      |                                                                                                                                     
TTTTTAACCAACAAAATCAAAAGTTCCAAGTGTTTTTATTGGGAAAAGATGAAAATAAATACAAAGAAAAAACACATGGTTTAGATGTCTTTGCGGTACCAGAATTAGTAGATTTAGATGGAAGAATATTTAGTGTTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTCTAAGAACGCCGAACTTACTAGTTAAAAAAATAGACGATAAAGACGGTTTTTCTATTGATGAATTTTTCTTTATTCAAAAGGAAGAAGT  >  CP000730/454522‑454789

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A