Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A23 F41 I0 R1	255	66.8	2308880	98.8%	2281173	145.9

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	1,501,769	C→T	6.5%	R70C (CGC→TGC)	tehB →	tellurite, selenium methyltransferase, SAM‑dependent; tellurite, selenium resistance protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,501,769	0	C	T	6.5%	192.5 / 3.1	61	R70C (CGC→TGC)	tehB	tellurite, selenium methyltransferase, SAM‑dependent; tellurite, selenium resistance protein
Reads supporting (aligned to +/- strand): ref base C (29/28); new base T (2/2); total (31/30)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.63e-01

TGGAAGCGGTGAAAGTGGTTAAACCGGGTAAAACGCTGGATCTGGGCTGTGGCAATGGTCGTAACAGTCTTTACCTGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGATTTTATTCTTTCGACTGTGGTGCTGATGTTCCTTGAGGCTAAAACCATCCCCGGGTTGATT  >  NC_000913/1501629‑1501912

tGGAAGCGGTGAAAGTGGTTAAACCGGGTAAAACGCTGGATCTGGGCTGTGGCAATGGTCGTAACAGTCTTTACCTGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTaaa                                                                                                                                         <  4:410423/149‑1 (MQ=255)

tGGAAGCGGTGAAAGTGGTTAAACCGGGTAAAACGCTGGATCTGGGCTGTGGCAATGGTCGTAACAGTCTTTACCTGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTaaa                                                                                                                                         >  2:207203/1‑149 (MQ=255)

tGGAAGCGGTGAAAGTGGTTAAACCGGGTAAAACGCTGGATCTGGGCTGTGGCAATGGTCGTAACAGTCTTTACCTGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTaaa                                                                                                                                         <  2:175499/149‑1 (MQ=255)

 ggAAGCGGTGAAAGTGGTTAAACCGGGTAAAACGCTGGATCTGGGCTGTGGCAATGGTCGTAACAGTCTTTACCTGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAAt                                                                                                                                        >  3:466595/1‑149 (MQ=255)

  gAAGCGGTGAAAGTGGTTAAACCGGGTAAAACGCTGGATCTGGGCTGTGGCAATGGTCGTAACAGTCTTTACCTGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATc                                                                                                                                       >  4:410854/1‑149 (MQ=255)

     gCGGTGAAAGTGGTTAAACCGGGTAAAACGCTGGATCTGGGCTGTGGCAATGGTCGTAACAGTCTTTACCTGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCAt                                                                                                                                    >  2:161721/1‑149 (MQ=255)

      cGGTGAAAGTGGTTAAACCGGGTAAAACGCTGGATCTGGGCTGTGGCAATGGTCGTAACAGTCTTTACCTGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCAtt                                                                                                                                   <  2:451508/149‑1 (MQ=255)

                 gTTAAACCGGGTAAAACGCTGGATCTGGGCTGTGGCAATGGTCGTAACAGTCTTTACCTGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGa                                                                                                                        >  3:443654/1‑149 (MQ=255)

                     aaCCGGGTAAAACGCTGGATCTGGGCTGTGGCAATGGTCGTAACAGTCTTTACCTGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAAt                                                                                                                    >  3:221206/1‑149 (MQ=255)

                     aaCCGGGTAAAACGCTGGATCTGGGCTGTGGCAATGGTCGTAACAGTCTTTACCTGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAAt                                                                                                                    >  1:558631/1‑149 (MQ=255)

                      aCCGGGTAAAACGCTGGATCTGGGCTGTGGCAATGGTCGTAACAGTCTTTACCTGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAAtt                                                                                                                   <  3:420159/149‑1 (MQ=255)

                            tAAAACGCTGGATCTGGGCTGTGGCAATGGTCGTAACAGTCTTTACCTGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTacaca                                                                                                             >  3:166994/1‑149 (MQ=255)

                               aaCGCTGGATCTGGGCTGTGGCAATGGTCGTAACAGTCTTTACCTGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACAccc                                                                                                          >  2:137019/1‑149 (MQ=255)

                                   cTGGATCTGGGCTGTGGCAATGGTCGTAACAGTCTTTACCTGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGt                                                                                                      >  3:45956/1‑149 (MQ=255)

                                    tGGATCTGGGCTGTGGCAATGGTCGTAACAGTCTTTACCTGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTc                                                                                                     <  3:521647/149‑1 (MQ=255)

                                       aTCTGGGCTGTGGCAATGGTCGTAACAGTCTTTACCTGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGtt                                                                                                  >  2:238472/1‑149 (MQ=255)

                                         cTGGGCTGTGGCAATGGTCGTAACAGTCTTTACCTGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGa                                                                                                <  1:455980/149‑1 (MQ=255)

                                           gggCTGTGGCAATGGTCGTAACAGTCTTTACCTGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATc                                                                                              <  4:46862/149‑1 (MQ=255)

                                               tgtgGCAATGGTCGTAACAGTCTTTACCTGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGaa                                                                                          <  4:162834/149‑1 (MQ=255)

                                                   gCAATGGTCGTAACAGTCTTTACCTGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAAc                                                                                      <  4:410762/149‑1 (MQ=255)

                                                       tGGTCGTAACAGTCTTTACCTGGCAGCCAAAGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGATCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTca                                                                                  >  4:12394/1‑149 (MQ=255)

                                                            gTAACAGTCTTTACCTGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACAttt                                                                             >  4:160958/1‑149 (MQ=255)

                                                              aaCAGTCTTTACCTGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGa                                                                           >  3:396661/1‑149 (MQ=255)

                                                               aCAGTCTTTACCTGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGAt                                                                          >  3:87798/1‑149 (MQ=255)

                                                                   tCTTTACCTGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGAc                                                                      >  2:448999/1‑149 (MQ=255)

                                                                   tCTTTACCTGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGAc                                                                      >  2:75893/1‑149 (MQ=255)

                                                                     tttACCTGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGTGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAg                                                                    >  4:503353/1‑149 (MQ=255)

                                                                     tttACCTGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGTGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAg                                                                    >  4:516259/1‑149 (MQ=255)

                                                                      ttACCTGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGt                                                                   <  4:559839/149‑1 (MQ=255)

                                                                          cTGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGa                                                               >  2:574539/1‑149 (MQ=255)

                                                                          cTGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGa                                                               >  4:188387/1‑149 (MQ=255)

                                                                           tGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGAt                                                              >  4:270399/1‑149 (MQ=255)

                                                                           tGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGAt                                                              <  2:515353/149‑1 (MQ=255)

                                                                           tGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGAt                                                              >  1:44042/1‑149 (MQ=255)

                                                                             gCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGAttt                                                            >  2:248665/1‑149 (MQ=255)

                                                                               aGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGATTTTa                                                          <  3:472984/149‑1 (MQ=255)

                                                                               aGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGATTTTa                                                          >  1:480721/1‑149 (MQ=255)

                                                                                gCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGATTTTAt                                                         <  1:383999/149‑1 (MQ=255)

                                                                                  cAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGATTTTATTc                                                       >  4:241116/1‑149 (MQ=255)

                                                                                   aaTGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGATTTTATTCt                                                      >  2:94986/1‑149 (MQ=255)

                                                                                        ttATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGATTTTATTCTTTCGa                                                 <  4:29437/149‑1 (MQ=255)

                                                                                         tATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGATTTTATTCTTTCGAc                                                >  3:335569/1‑149 (MQ=255)

                                                                                             atgTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGATTTTATTCTTTCGACtgtg                                            <  3:448042/149‑1 (MQ=255)

                                                                                                    cGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGATTTTATTCTTTCGACTGTGGTGCTGa                                     <  4:170563/149‑1 (MQ=255)

                                                                                                       aTGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGATTTTATTCTTTCGACTGTGGTGCTGATGt                                  >  4:92868/1‑149 (MQ=255)

                                                                                                          ggATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGATTTTATTCTTTCGACTGTGGTGCTGATGTTcc                               <  1:207203/149‑1 (MQ=255)

                                                                                                              aaaaaTGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGATTTTATTCTTTCGACTGTGGTGCTGATGTTCCTTGa                           <  3:252486/149‑1 (MQ=255)

                                                                                                              aaaaaTGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGATTTTATTCTTTCGACTGTGGTCCTGATGTTCCTTGa                           <  3:43477/149‑1 (MQ=255)

                                                                                                              aaaaaTGCCATGAATATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGATTTTATTCTTTCGCCTGTGGTGCTGATGTTCCTTGa                           <  2:275864/149‑1 (MQ=255)

                                                                                                               aaaaTGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGATTTTATTCTTTCGACTGTGGTGCTGATGTTCCTTGAg                          <  4:45956/149‑1 (MQ=255)

                                                                                                               aaaaTGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGATTTTATTCTTTCGACTGTGGTGCTGATGTTCCTTGAg                          <  1:53663/149‑1 (MQ=255)

                                                                                                                 aaTGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGATTTTATTCTTTCGACTGTGGTGCTGATGTTCCTTGAGGc                        <  4:166994/149‑1 (MQ=255)

                                                                                                                           gTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGATTTTATTCTTTCGACTGTGGTGCTGATGTTCCTTGa                           <  2:111503/136‑1 (MQ=255)

                                                                                                                           gTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGATTTTATTCTTTCGACTGTGGTGCTGATGTTCCTTGa                           >  1:111503/1‑136 (MQ=255)

                                                                                                                                  cAACGTCGAGTGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGATTTTATTCTTTCGACTGTGGTGCTGATGTTCCTTGAGGCTAAAACCATCCCCGGGt       <  3:516259/149‑1 (MQ=255)

                                                                                                                                  cAACGTCGAGTGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGATTTTATTCTTTCGACTGTGGTGCTGATGTTCCTTGAGGCTAAAACCATCCCCGGGt       <  3:503353/149‑1 (MQ=255)

                                                                                                                                  cAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGATTTTATTCTTTCGTCTGTGGTGCTGATGTTCCTTGAGGCTAAAACCATCCCCGGGt       >  1:477896/1‑149 (MQ=255)

                                                                                                                                     cGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGATTTTATTCTTTCGACTGTGGTGCTGATGTTCCTTGAGGCTAAAACCATCCCCGGGTTGa    <  2:44042/149‑1 (MQ=255)

                                                                                                                                     cGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGATTTTATTCCTTCGACTGTGGTGCTGATGTTCCTTGAGGCTAAAACCATCCCCGGGTTGa    <  3:92868/149‑1 (MQ=255)

                                                                                                                                      gTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGATTTTATTCTTTCGACTGTGGTGCTGATGTTCCTTGAGGCTAAAACCATCCCCGGGTTGAt   <  1:75893/149‑1 (MQ=255)

                                                                                                                                       tCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGATTTTATTCTTTCGACTGTGGTGCTGATGTTCCTTGAGGCTAAAACCATCCCCGGGTTGAtt  <  1:343315/149‑1 (MQ=255)

TGGAAGCGGTGAAAGTGGTTAAACCGGGTAAAACGCTGGATCTGGGCTGTGGCAATGGTCGTAACAGTCTTTACCTGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGATTTTATTCTTTCGACTGTGGTGCTGATGTTCCTTGAGGCTAAAACCATCCCCGGGTTGATT  >  NC_000913/1501629‑1501912

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A