Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F176 I0 R1
|
792 |
112.0 |
3729108 |
98.1% |
3658254 |
142.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
2,302,295 |
G→T |
100% |
I153I (ATC→ATA) |
napA ← |
nitrate reductase, periplasmic, large subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,302,295 | 0 | G | T | 100.0%
| 367.9
/ NA
| 99 | I153I (ATC→ATA) | napA | nitrate reductase, periplasmic, large subunit |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (48/51); total (48/51) |
| Rejected as polymorphism: Frequency below/above cutoff threshold. |
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. |
Only 100 of 101 total aligned reads displayed.
CGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCAGATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGTAAATTCGCCTTCTTTGTCATATTTACCG > NC_000913/2302150‑2302436
|
cgtcATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCAtata < 1:654914/149‑1 (MQ=255)
cgtcATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCAtata < 1:909083/149‑1 (MQ=255)
gtcATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAg > 2:692435/1‑149 (MQ=255)
gcagcCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACt < 3:657505/149‑1 (MQ=255)
agcCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGa < 2:66886/149‑1 (MQ=255)
gcCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGAc < 1:395893/149‑1 (MQ=255)
aTCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGa > 1:811887/1‑149 (MQ=255)
tCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGAc < 1:741852/139‑1 (MQ=255)
tCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGAc > 2:741852/1‑139 (MQ=255)
tCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGaa > 4:446924/1‑149 (MQ=255)
tCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGaa > 1:347524/1‑149 (MQ=255)
aTCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGACGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACt < 2:278078/134‑1 (MQ=255)
aTCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACt > 1:278078/1‑134 (MQ=255)
aTCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACa > 1:353024/1‑149 (MQ=255)
tCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACAt > 2:356978/1‑149 (MQ=255)
cATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATAc > 1:301730/1‑149 (MQ=255)
cAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACcgatc < 1:58378/149‑1 (MQ=255)
cAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACcgatc > 3:774005/1‑149 (MQ=255)
cGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCgg < 1:6851/149‑1 (MQ=255)
gCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCTATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATAGAGGCCACTTACCAGAACCGAACATACCGACCGATTCCGGc > 4:511472/1‑149 (MQ=255)
gCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGc < 4:17389/149‑1 (MQ=255)
aTAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGccc > 3:695629/1‑149 (MQ=255)
tAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCt > 3:500750/1‑149 (MQ=255)
aaGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCttt > 3:688352/1‑149 (MQ=255)
aGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCtttt > 2:459064/1‑149 (MQ=255)
gCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCttttt < 1:90921/149‑1 (MQ=255)
gCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCttttt < 4:411092/149‑1 (MQ=255)
ccAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTtttc > 2:627525/1‑149 (MQ=255)
ccAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTtttc < 1:927498/149‑1 (MQ=255)
aaCTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTtttctt > 4:825253/1‑149 (MQ=255)
aaCTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTtttctt > 1:700493/1‑149 (MQ=255)
aaCTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTtttctt > 1:619256/1‑149 (MQ=255)
tactGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCa < 1:597398/149‑1 (MQ=255)
tactGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCa < 3:66955/149‑1 (MQ=255)
gCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGc < 3:840354/149‑1 (MQ=255)
cGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGttt < 3:825253/149‑1 (MQ=255)
ccATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTg > 3:199517/1‑149 (MQ=255)
cATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCCGCCCTTTTTCTTTCAGGGCGGTTTTGa < 4:832525/149‑1 (MQ=255)
aTACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGtttt > 2:570948/1‑146 (MQ=255)
aTACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGtttt < 1:570948/146‑1 (MQ=255)
aTACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGaa < 2:783709/149‑1 (MQ=255)
aTACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGaa > 1:831781/1‑149 (MQ=255)
aTACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGaa < 2:353024/149‑1 (MQ=255)
aTACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGaa < 1:125034/149‑1 (MQ=255)
aTACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGaa < 1:3003/149‑1 (MQ=255)
aTACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGaa < 1:356978/149‑1 (MQ=255)
aTACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGaa < 4:688352/149‑1 (MQ=255)
tACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAAt < 4:758003/149‑1 (MQ=255)
cAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAAttt < 2:126266/149‑1 (MQ=255)
aGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTtc < 1:692435/149‑1 (MQ=255)
gTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTtct < 3:17427/149‑1 (MQ=255)
gcgTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCAt > 3:562878/1‑149 (MQ=255)
tCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATcaca > 3:154442/1‑149 (MQ=255)
cGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAg < 2:537177/149‑1 (MQ=255)
cGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAg < 1:839521/149‑1 (MQ=255)
gATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAgg > 1:111055/1‑149 (MQ=255)
gATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTATTCTTTCAGGGAGGTTTTGAATTTCTCTTCCATCACATCGAAgg > 2:815006/1‑149 (MQ=255)
tgttgtTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGcc < 2:674838/149‑1 (MQ=255)
gttgttCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCt > 3:496120/1‑149 (MQ=255)
gttCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGAt > 4:337500/1‑149 (MQ=255)
ttCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATc > 1:377944/1‑149 (MQ=255)
gAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGaa > 1:315253/1‑116 (MQ=255)
gAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGaa < 2:315253/116‑1 (MQ=255)
gAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCa < 2:227367/149‑1 (MQ=255)
aCGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAgg > 1:11168/1‑149 (MQ=255)
ggAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTg < 1:248007/149‑1 (MQ=255)
cccGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAg < 4:323014/141‑1 (MQ=255)
cccGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAg > 3:323014/1‑141 (MQ=255)
cccGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTgg < 1:459064/149‑1 (MQ=255)
ccGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGaa < 4:564116/56‑1 (MQ=255)
ccGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGaa > 3:564116/1‑56 (MQ=255)
ccGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTggg < 2:111055/149‑1 (MQ=255)
ccGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTggg > 1:809451/1‑149 (MQ=255)
ccGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTggg < 2:811887/149‑1 (MQ=255)
ccGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTggg > 4:583723/1‑149 (MQ=255)
cGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTgggg < 2:482255/149‑1 (MQ=255)
gCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGt > 1:402298/1‑149 (MQ=255)
gCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGt > 1:226788/1‑149 (MQ=255)
cTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCg > 1:517611/1‑122 (MQ=255)
cTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCg < 2:517611/122‑1 (MQ=255)
ttAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGTaaa < 3:822140/149‑1 (MQ=255)
aaCAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTggg < 2:532412/141‑1 (MQ=255)
aaCAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTggg > 1:532412/1‑141 (MQ=255)
gCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCtttt < 4:172881/74‑1 (MQ=255)
gCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCtttt > 3:172881/1‑74 (MQ=255)
cTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGTAAATTCGCctt < 1:656976/149‑1 (MQ=255)
ttGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGTAAATTCGCcttc > 4:254415/1‑149 (MQ=255)
ttGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGTAAATTCGCcttc > 2:227244/1‑149 (MQ=255)
gACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAGCCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGTAAATTCGCCTTCttt < 1:284742/149‑1 (MQ=255)
aCGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGTAAATTCGCCTTCTTTg < 3:254415/149‑1 (MQ=255)
cgcgGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGTAAATTCGCCTTCTTTGt < 2:831781/149‑1 (MQ=255)
gcgGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAg > 1:390098/1‑108 (MQ=255)
gcgGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAg < 2:390098/108‑1 (MQ=255)
cgGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGTAAATTCGCCTTCTTTGTCa < 4:562878/149‑1 (MQ=255)
gCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGTAAATTCGCCTTCTTTGTCata < 3:90540/149‑1 (MQ=255)
aTAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGTAAATTCGCCTTCTTTGTCATAtt > 4:110957/1‑149 (MQ=255)
aaCCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGTAAATTCGCCTTCTTTGTCATATTTa > 2:175550/1‑149 (MQ=255)
aCCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGTAAATTCGCCTTCTTTGTCATATTTAc < 2:619256/149‑1 (MQ=255)
cTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGTAAATTCGCCTTCTTTGTCATATTTACCg > 3:590695/1‑149 (MQ=255)
cTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGTAAATTCGCCTTCTTTGTCATATTTACCg > 4:852399/1‑149 (MQ=255)
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CGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCAGATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGTAAATTCGCCTTCTTTGTCATATTTACCG > NC_000913/2302150‑2302436
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
