Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F176 I0 R1
|
792 |
112.0 |
3729108 |
98.1% |
3658254 |
142.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,842,796 |
G→T |
20.4% |
L332M (CTG→ATG) |
adeQ ← |
adenine permease, high affinity; adenine:H+ symporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,842,796 | 0 | G | T | 20.4%
| 277.6
/ 56.2
| 103 | L332M (CTG→ATG) | adeQ | adenine permease, high affinity; adenine:H+ symporter |
| Reads supporting (aligned to +/- strand): ref base G (41/41); new base T (10/11); total (51/52) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.97e-01 |
Only 100 of 103 total aligned reads displayed.
ATCCCAGTTAACGCGCGCCAGGCTCGAAGTCATCAGCACGCCAACAAAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCACCGAACTGACGCTATCAACATACAGCGCCTTATTCATATTGGGGAATTTACCGTTACCATCTAT > NC_000913/3842650‑3842943
|
atcCCAGTTAACGCGCGCCAGGCTCGAAGTCATCAGCACGCCAACAAAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGcc < 3:861022/149‑1 (MQ=255)
cccAGTTAACGCGCGCCAGGCTCGAAGTCATCAGCACGCCAACAAAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGcccc > 4:620641/1‑149 (MQ=255)
ccAGTTAACGCGCGCCAGGCTCGAAGTCATCAGCACGCCAACAAAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCg > 4:531027/1‑149 (MQ=255)
ccAGTTAACGCGCGCCAGGCTCGAAGTCATCAGCACGCCAACAAAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCg > 3:373962/1‑149 (MQ=255)
cAGTTAACGCGCGCCAGGCTCGAAGTCATCAGCACGCCAACAAAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGt > 1:827673/1‑149 (MQ=255)
ttAACGCGCGCCAGGCTCGAAGTCATCAGCACGCCAACAAAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCg < 1:821262/149‑1 (MQ=255)
aaCGCGCGCCAGGCTCGAAGTCATCAGCACGCCAACAAAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGc < 4:767140/149‑1 (MQ=255)
gcgcgcCAGGCTCGAAGTCATCAGCACGCCAACAAAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCATCCCCGTGCGGCCAc < 2:475712/149‑1 (MQ=255)
gcgcCAGGCTCGAAGTCATCAGCACGCCAACAAAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCg > 2:160947/1‑149 (MQ=255)
ccAGGCTCGAAGTCATCAGCACGCCAACAAAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACt < 1:542869/149‑1 (MQ=255)
ccAGGCTCGAAGTCATCAGCACGCCAACAAAGATTAACGCGCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCATCCCCGTGCGGCCACCGACt < 4:314904/149‑1 (MQ=255)
cAGGCTCGAAGTCATCAGCACGCCAACAAAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTg > 3:275867/1‑149 (MQ=255)
cAGGCTCGAAGTCATCAGCACGCCAACAAAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTg > 4:615218/1‑149 (MQ=255)
aGGCTCGAAGTCATCAGCACGCCAACAAAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGc < 3:259642/149‑1 (MQ=255)
cTCGAAGTCATCAGCACGCCAACAAAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCcac > 1:819423/1‑149 (MQ=255)
tCGAAGTCATCAGCACGCCAACAAAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGGACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCcaca > 4:566208/1‑149 (MQ=255)
tCGAAGTCATCAGCACGCCAACAAAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCcaca > 1:632340/1‑149 (MQ=255)
cGAAGTCATCAGCACGCCAACAAAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTTAGCCCCGTGCGGCCACCGACTGCCacac < 1:886521/149‑1 (MQ=255)
tcatcaGCACGCCAACAAAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCATCCCCGTGCGGCCACCGACTGc < 4:231097/139‑1 (MQ=255)
tcatcaGCACGCCAACAAAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCATCCCCGTGCGGCCACCGACTGc > 3:231097/1‑139 (MQ=255)
tcatcaGCACGCCAACAAAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGaa < 4:541991/149‑1 (MQ=255)
tcataaGCACGACAACAAAGATTAACGCCCCGGCGGTTGTGTAAGGAGGAACGATCGCGACCAGCGGTGAGAAGAACATACCCACCAGGAAAATAACGCCAACCACACCCGCCGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGac < 2:905906/149‑2 (MQ=255)
atcaGCACGCCAACAAAGATTAACGCTCCGGCGGTTGCGTGAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGt > 3:332547/1‑149 (MQ=255)
atcaGCACGCCAACAAAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCATCCCCGTGCGGCCACCGACTGCCACACCAGAAGt > 2:307930/1‑149 (MQ=255)
atcaGCACGCCAACAAAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCATCCCCGTGCGGCCACCGACTGCCACACCAGAAGt > 2:283370/1‑149 (MQ=255)
atcaGCACGCCAACAAAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCATCCCCGTGCGGCCACCGACTGCCACACCAGAAGt > 2:129287/1‑149 (MQ=255)
atcaGCACGCCAACAAAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGcc > 3:49359/1‑118 (MQ=255)
atcaGCACGCCAACAAAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGcc < 4:49359/118‑1 (MQ=255)
atcaGCACGCCAACAAAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCTACCGACTGCCACACCAGAAga > 1:905906/1‑148 (MQ=255)
tcaGCACGCCAACAAAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTa < 1:58188/149‑1 (MQ=255)
caGCACGCCAACAAAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTAc < 3:290079/149‑1 (MQ=255)
gCACGCCAACAAAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACtt < 2:309031/149‑1 (MQ=255)
cACGCCAACAAAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCATCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACttt > 3:804110/1‑149 (MQ=255)
gCCAACAAAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCATCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCaa < 1:253200/149‑1 (MQ=255)
caaAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCATCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAg < 1:739447/149‑1 (MQ=255)
caaAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCATCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAg < 2:844451/149‑1 (MQ=255)
caaAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAg < 3:767474/149‑1 (MQ=255)
aaGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGc < 3:440256/149‑1 (MQ=255)
aGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCa < 2:317597/149‑1 (MQ=255)
aGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCACAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCa < 1:224721/149‑1 (MQ=255)
ttAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTa > 4:849963/1‑149 (MQ=255)
tAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTaa < 4:399491/149‑1 (MQ=255)
gCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGa > 1:679655/1‑149 (MQ=255)
cTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCATCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGAc < 2:666375/149‑1 (MQ=255)
tCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCATCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACg > 2:905926/1‑149 (MQ=255)
ccGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGa < 1:842620/149‑1 (MQ=255)
gcggTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGt < 1:790706/149‑1 (MQ=255)
gcggTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGt < 4:246400/149‑1 (MQ=255)
gcggTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGt < 3:532642/149‑1 (MQ=255)
ggTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCATCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGc < 1:307930/149‑1 (MQ=255)
gTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGcc < 1:244464/149‑1 (MQ=255)
tAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCATCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATaaa > 4:635754/1‑149 (MQ=255)
tAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGc < 2:503494/142‑1 (MQ=255)
tAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGc > 1:503494/1‑142 (MQ=255)
aaGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCATCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAAc < 3:527395/149‑1 (MQ=255)
aaGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAAc < 2:548392/149‑1 (MQ=255)
aaGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCACCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAAc < 1:43181/149‑1 (MQ=255)
aggaACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCAc > 3:810041/1‑149 (MQ=255)
ggaACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCAcc > 4:890093/1‑149 (MQ=255)
aCTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGc > 2:223956/1‑149 (MQ=255)
tATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCa > 1:368146/1‑149 (MQ=255)
tCGCCACCAGCGGTGAGAAGAACATACCCAACAGGAACATAACGCCAACCACAACCGCAGTCATCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCAcc > 3:573504/1‑149 (MQ=255)
cGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCACCg > 2:602231/1‑149 (MQ=255)
aGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCACCGAACTGAc > 2:552866/1‑149 (MQ=255)
ggTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCACCGAACTGACGCt < 2:368146/149‑1 (MQ=255)
gagaAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCATCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCACCGAACTGACGCTATc < 1:234298/149‑1 (MQ=255)
gaagaaCATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCACCGAACTGACGCTATCaa > 1:918030/1‑149 (MQ=255)
gaagaaCATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCACCGAACTGACGCTATCaa < 2:819423/149‑1 (MQ=255)
aagaaCATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCACCGAACTCACGCTATCAAc < 3:597392/149‑1 (MQ=255)
gaaCATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAAtata > 3:492515/1‑90 (MQ=255)
gaaCATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAAtata < 4:492515/90‑1 (MQ=255)
gaaCATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCACCGAACTGACGCTATCAACAt > 1:868937/1‑149 (MQ=255)
gaaCATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCACCGAACTGACGCTATCAACAt > 3:678475/1‑149 (MQ=255)
aaCATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCACCGAACTGACGCTATCAACATa < 4:332547/149‑1 (MQ=255)
aCATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCACCGAACTGACGCTATCAACATAc > 2:620973/1‑149 (MQ=255)
aTAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGa > 1:181903/1‑101 (MQ=255)
aTAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGa < 2:181903/101‑1 (MQ=255)
aCCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCACCGAACTGACGCTATCAACATACAgcgc > 1:661209/1‑149 (MQ=255)
ccAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCACCGAACTGACGCTATCAACATACAGCGcc > 1:703511/1‑149 (MQ=255)
cAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCACCGAACTGACGCTATCAACATACAGCGCCt > 1:417374/1‑149 (MQ=255)
aaCAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCACCGAACTGACGCTATCAACATACAGCGCCtt > 1:127737/1‑149 (MQ=255)
ggAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCACCGAACTGACGCTATCAACATACAGCGCCTTATTc < 3:917365/149‑1 (MQ=255)
aaCATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCACCGAACTGACGCTATCAACATACAGCGCCTTATTCat > 4:898489/1‑149 (MQ=255)
cATAACGCCAACCACAACCGCAGTCATCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCACCGAACTGACGCTATCAACATACAGCGCCTTATTCatat < 1:129287/149‑1 (MQ=255)
aTAACGCCAACCACAACCGCAGTCATCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCACCGAACTGACGCTATCAACATACAGCGCCTTATTCATAtt > 3:393406/1‑149 (MQ=255)
tAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGATGTGCCGATAAACGCACCCGCCACCGAACTGACGCTATCAACATACAGCGCCTTATTCATATTg > 2:114930/1‑149 (MQ=255)
aaCGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCACCGAACTGACGCTATCAACATACAGCGCCTTATTCATATTgg < 1:160947/149‑1 (MQ=255)
gCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCACCGAACTGACGCTATCAACATACAGCGCCTTATTCATATTGGGGa > 3:24510/1‑149 (MQ=255)
cacaACCGCAGTCATCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCACCGAACTGACGCTATCAACATACAGCGCCTTATTCATATTGGGGAATTTAc > 4:389709/1‑149 (MQ=255)
cacaACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCACCGAACTGACGCTATCAACATACAGCGCCTTATTCATATTGGGGAATTTAc > 3:611593/1‑149 (MQ=255)
cacaACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCACCGAACTGACGCTATCAACATACAGCGCCTTATTCATATTGGGGAATTTAc < 2:703511/149‑1 (MQ=255)
cacaACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCACCGAACTGACGCTATCAACATACAGCGCCTTATTCATATTGGGGAATTTAc < 4:678475/149‑1 (MQ=255)
acaACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCACCGAACTGACGCTATCAACATACAGCGCCTTATTCATATTGGGGAATTTAcc > 3:427040/1‑149 (MQ=255)
ccGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCACCGAACTGACGCTATCAACATACAGCGCCTTATTCATATTGGGGAATTTACCGTTa > 2:928107/1‑149 (MQ=255)
ccGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCACCGAACTGACGCTATCAACATACAGCGCCTTATTCATATTGGGGAATTTACCGTTa > 2:617872/1‑149 (MQ=255)
ccGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCACCGAACTGACGCTATCAACATACAGCGCCTTATTCATATTGGGGAATTTACCGTTa < 4:24510/149‑1 (MQ=255)
cGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCACCGAACTGACGCTATCAACATACAGCGCCTTATTCATATTGGGGAATTTACCGTTAc < 4:373962/149‑1 (MQ=255)
cAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCACCGAACTGACGCTATCAACATACAGCGCCTTATTCATATTGGGGAATTTACCGTTACCATCTa < 2:510322/149‑1 (MQ=255)
aGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCACCGAACTGACGCTATCAACATACAGCGCCTTATTCATATTGGGGAATTTACCGTTACCATCTAt < 2:417374/149‑1 (MQ=255)
aGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCACCGAACTGACGCTATCAACATACAGCGCCTTATTCATATTGGGGAATTTACCGTTACCATCTAt < 3:890093/149‑1 (MQ=255)
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ATCCCAGTTAACGCGCGCCAGGCTCGAAGTCATCAGCACGCCAACAAAGATTAACGCTCCGGCGGTTGCGTAAGGAGGAACTATCGCCACCAGCGGTGAGAAGAACATAACCAACAGGAACATAACGCCAACCACAACCGCAGTCAGCCCCGTGCGGCCACCGACTGCCACACCAGAAGTACTTTCAATATAGGCAGTAACAGACGAGGTGCCGATAAACGCACCCGCCACCGAACTGACGCTATCAACATACAGCGCCTTATTCATATTGGGGAATTTACCGTTACCATCTAT > NC_000913/3842650‑3842943
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
