Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A2 F182 I1 R1 14 131.7 2761433 90.1% 2488051 260.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,696,097 T→C intergenic (‑26/+365) uidA ← / ← uidR beta‑D‑glucuronidase/transcriptional repressor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,696,0970TC95.5% 309.7 / NA 88intergenic (‑26/+365)uidA/uidRbeta‑D‑glucuronidase/transcriptional repressor
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (38/46);  minor base A (4/0);  total (42/46)
Fisher's exact test for biased strand distribution p-value = 4.80e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TGGCCTGCCCAACCTTTCGGTATAAAGACTTCGCGCTGATACCAGACGTTGCCCGCATAATTACGAATATCTGCATCGGCGAACTGATCGTTAAAACTGCCTGGCACAGCAATTGCCCGGCTTTCTTGTAACGCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAATACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGTTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCT  >  NC_000913/1695827‑1696371
                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                                  
tGGGCTGCCCAAACTTTCAGTAGAAAGCATTCGACCTGCTAACAGTCGTTGCCCGCAACATACCTAATATCTGCTCCGGCGAACTGATCGTTAAAACTGCCCGGCTCAGCACTTGCCCGGCTGTCTTGTACCGCGCTTTCCCACCTACGCTGCTAGATTCCACAGTTTTCGCGATCCAGAGTGAATTTCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTc                                                                                                                                                                                                                                                                             <  4:368026/278‑1 (MQ=255)
tGGCCTGCCCAACCTTTCGGTATAAAGACTTCGCGCTGATACCAGACGTTGCCCGCATAATTACGAATATCTGCATCGGCGAACTGATCGTTAAAACTGCCTGGCACAGCAATTGCCCGGCTTTCTTGTAACGCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAacac                                                                                                                                                                                                                                                                                  >  1:397190/1‑273 (MQ=255)
tGGCCTGCCCAACCTTTCGGTATAAAGACTTCGCGCTGATACCAGACGTTGCCCGCATAATTACGAATATCTGCATCGGCGAACTGATCGTTAAAACTGCCTGGCACAGCAATTGCCCGGCTTTCTTGTAACGCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTg                                                                                                                                                                                                                                                                                >  3:548503/1‑275 (MQ=255)
  gCCTGCCCAACCCTTCGGTATAAAGACTTCGCGCTGATACCAGACGTTGCCCGCATAATTACGAATATATGCATCGGCGAACTGAACGTTAAAACTGCCTGGCACAGCAATTGCCCGGCCTTCTTGTAACGCGCTTTCCCACCAACTCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGCGTTCTTGGATTTCATGGGTTGGGGTTTACACAGGCAGTAATCACAGGTATGCCTCAATAAGTTAAGAAAACTgtc                                                                                                                                                                                                                                                                              >  3:479354/1‑273 (MQ=255)
  gCCTGCCCAACCAGTGCGGAGAAAGACTTGCCCACGATACCAGACGGGGGCCGCATAATTAACAATAACTGCATCGGCGAACTGAGCGTTAAACCTGCCTGGCACAGCCATTGCCCGGCTTTCTTGTACCGCGCTTTCCCACCACCGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATTNCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTc                                                                                                                                                                                                                                                                             <  4:346667/276‑1 (MQ=255)
   ccTGCCCAACCTTTCGGTATAAAGACTTCGCGCTGATACCAGACGTTGCCCGCATAATTACGAATATCTGCATCGGCGAACTGATCGTTAAAACTGCCTGGCACAGCAATTGCCCGGCTTTCTTGTAACGCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTc                                                                                                                                                                                                                                                                             <  3:598878/275‑1 (MQ=255)
     tgccacaCCTTTCGGTAAAAAGAATGCGCGCGGATACAGAACGGTGCCCGCCTAATTACGAATACTTGCAGCGGCGAACTGATCTTTAAAACTGCCTGGCACAGCAATTGCCCGGCTTTCTTGTAACGCGCTTACCCACCACAGCTGATCAATTCCACAGTTTTGGCCATCCAGACTGAAAGCCCACAGGCCGTGGAGCTTTTTGTTTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTAGTc                                                                                                                                                                                                                                                                             <  3:198864/267‑1 (MQ=255)
              tttCGGTATAAAGCCTTCGCGCTGATACCAGACGTCGCCCGCATAATTACGAATATCTGCATCGGCGAACTGATCGTTAAAACTGCCTGGCACAGCAATTGCCCGGCTTTCTTGTAACGCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTg                                                                                                                                                                                                                                                                <  2:231134/277‑1 (MQ=255)
                         atccTTCGCGCTGATACCAGACTTTTCCCGTATAAATACGAAAATCTGCATCGGCGAACTGCTCGTTAAAACTGCCTGTCACAGGAATGGCCCTGCTTTCTTGTCACTCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTACGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAAc                                                                                                                                                                                                                                                      <  4:267858/273‑1 (MQ=255)
                          taCTTCGCGCTGATACCAGACGTTGCCCGCATACTTAAGAATATCTGCATCGGCGAACTGATCGTTAAAACTGCCTGGCACAGCAATTGCCCTGCTTTCTTGTAACGCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGCATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAAc                                                                                                                                                                                                                                                      <  3:563055/274‑1 (MQ=255)
                              tCGCGCTGATACCAGACGTTGCCCGCATAATTACGAATATCTGCATCGGCGAACTGATCGTTAAAACTGCCTGGCACAGCAATTGCCCGGCTTTCTTGTAACGCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGCCGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCGGATTAGTTAACCAATTCt                                                                                                                                                                                                                                               >  2:321882/1‑278 (MQ=255)
                              tCGCGCTGATACCAGACGTTGCCCGCATAATTACGAATATCTGCATCGGCGAACTGATCGTTAAAACTGCCTGGCACAGCAATTGCCCGGCTTTCTTGTAACGCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGTTGAACCTTTCATCTGATTCGTTAACCAAt                                                                                                                                                                                                                                                  >  3:89742/1‑275 (MQ=255)
                              tCGCGCTGATACCAGACGTTGCCCGCATAATTACGAATATCTGCATCGGCGAACTGATCGTTAAAACTGCCTGGCACAGCAATTGCCCGGCTTTCTTGTAACGCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAAttat                                                                                                                                                                                                                                               >  2:435853/1‑276 (MQ=255)
                              tCGCGCTGATACCAGACGTTGCCCGCATAATTACGAATATCTGCATCGGCGAACTGATCGTTAAAACTGCCTGGCACAGCAATTGCCCGGCTTTCTTGTAACGCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAAt                                                                                                                                                                                                                                                  >  1:586725/1‑275 (MQ=255)
                              tCGCGCTGATACCAGACGTTGCCCGCATAATTACGAATATCTGCATCGGCGAACTGATCGTTAAAACTGCCTGGCACAGCAATTGCCCGGCTTTCTTGTAACGCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTCTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACGCCTCATTAAGATACTAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCt                                                                                                                                                                                                                                               >  2:363776/1‑278 (MQ=255)
                              tCGCGCTGATACCAGACGTTGCCCGCATAATTACGAATATCTGCATCGGCGAACTGATCGTTAAAACTGCCTGGCACAGCAATTGCCCGGCTTTCTTGTAACGCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGGTTTTTGATTTCACGGGTTGGGGTTTCTACAGGCCGTAAAATAAGGGACCCCTCTTTCAGATAAAACAACTGGTCAACCTTTAATCTGATTTGTTAAcaact                                                                                                                                                                                                                                                  >  3:449364/1‑271 (MQ=255)
                              tCGCGCTGATACCAGACGTTGCCCGCATAATTACGAATATCTGCATCGGCGAACTGATCGGTAAAACTGCCTGGCACAGAAATTGCCCGGCTTTCTTGTAACGCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGACAACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGAATTATAAAGGACGAAAACTAAGGGACTCCTCTATAAGAAACAAACACAGGTAAAACTGACATTTGATTGTATAACCAATTCt                                                                                                                                                                                                                                               >  4:550437/1‑278 (MQ=255)
                                gcgcTGATACCAGACGTTGCCCGCATAATTACGAATATCTGCATCGGCGAACTGATCGTTAAAACTGCCTGGCACAGCAATTGCCCGGCTTTCTTGTAACGCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATATGGGACTCCGCATTAAGATAATAAAACGGTGAAACCTTGAATTTGCTTAGTTACCAAAttagtt                                                                                                                                                                                                                                             >  2:24171/1‑274 (MQ=255)
                                   cTGAAACCGGACGTTGCCCGCATAATTACGAATATCTTCATCGGCGAACTGATCGTTAAAACTGCCTGGCACAGCAATTGCCCGGCTTTCTTGTAACGCGCTTTCCCACCAACGCTG‑TCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCtgtg                                                                                                                                                                                                                                            <  1:632909/275‑1 (MQ=255)
                                          cataCGTGGCCCCGATAATTACAAGTATCTGCATCGGCGAACTCATCTGTAAAACCGCCTGGCACAACAATTGCCCTGCTTTCTTGGAACTCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACCGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACATGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGcac                                                                                                                                                                                                                                      <  3:652349/272‑1 (MQ=255)
                                          cAGACGTTGCCCGCATAATTACGAATATCTGCATCGGCGAACTGATCGTTAAAACTGCCTGGCACAGCAATTGCCCGGCTTTCTTGTAACGCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGcac                                                                                                                                                                                                                                      <  1:89743/275‑1 (MQ=255)
                                          cAGACGTTGCCCGCATAATTACGAATATCTGCATCGGCGAACTGATCGTTAAAACTGCCTGGCACAGCAATTGCCCGGCTTTCTTGTAACGCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGcac                                                                                                                                                                                                                                      <  1:401664/275‑1 (MQ=255)
                                                    cccaaTAATTACGAATATCTGCACCGGCGAACTGATCGTTAGAAATGCCTGGCACAGCAATTGCCCGGCTTTCTTGTAACGCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATc                                                                                                                                                                                                                             <  3:48797/270‑1 (MQ=255)
                                                      gCATAATTACGAATATCTTCATCTCCGACCTGATCGTTCACACTGCCCGGCACAGCAATTGCCCGGCTTTCTTGTAACGCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAGTCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTgag                                                                                                                                                                                                                       <  4:200164/278‑1 (MQ=255)
                                                           aTTACGAATATCTGCATAGGCGAACTGTTCGTTAAGCCTGCCTGGCAAAGCAATTGCCCGGTTTTCTTGTAACGCGCTTTCCCACAAACGCTGATAAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAAGTCTGTGTTGCACACAGTTATCTGTGAGaa                                                                                                                                                                                                                     <  1:190064/275‑1 (MQ=255)
                                                            ttACGAATATCTGGCTCGGCGAACTTATCGTTAAAACTGCCTGGCACAGCAATTGCCCGGCTTTCTTGTAACGCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGaa                                                                                                                                                                                                                     <  3:421574/274‑1 (MQ=255)
                                                             tACGAATATCTGCATCGGCGAACTGATCGTTAAAACTGCCTGGCACAGCAATTGCCCGGCTTTCTTGTAACGCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAAAACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGt                                                                                                                                                                                                                                 >  1:48798/1‑261 (MQ=255)
                                                                  atatCTGCATCGGCGAACTGATCGTTAAAACTGCCTGGCACAGCAATTGCCCGGCTTTCTTGTAACGCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCACACTTTAATCTGATTAGTTAACCAATTCAGTGTTGCACAAAATTATCTGTGAGAAACCCATGGac                                                                                                                                                                                                           >  2:200164/1‑277 (MQ=255)
                                                                   aatCTGCATCGGCGAACTGATCGTTAAAACTGCCTGGCACAGCAATTGCCCGGCTTTCTTGTAACGCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATgg                                                                                                                                                                                                             <  1:63580/274‑1 (MQ=255)
                                                                    atCTGCATCGGCGAACTGATCGTTAAAACTGCCTGGCACAGCAATTGCCCGGCTTTCTTGTAACGCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCCCGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCTTCATTAAGATAATAACACTGGTCAACCTTTAATATGTGTATTTAACCAATTATTTGTTTCCCACAGTTATCTGTTAGAAAACCAGGGaaag                                                                                                                                                                                                         >  4:436566/1‑276 (MQ=255)
                                                                      cTGCATCGGCGAACTGATCGTTAAAACTGCCTGGCACAGCAATTGCCCGGCTTTCTTGTAACGCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGaa                                                                                                                                                                                                           <  1:548504/274‑1 (MQ=255)
                                                                                gAACTGATCGTTAAAACTGCCTGGCACAGCAATTGCCCGGCTTTCTTGTAACGCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGaa                                                                                                                                                                                                <  3:586724/275‑1 (MQ=255)
                                                                                   cTGATCGTTAAAACTGCCTGGCACAGCAATTGCCCGGCTTTCTTGTAACGCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAAt                                                                                                                                                                                              >  1:361226/1‑274 (MQ=255)
                                                                                   cTGATCGTTAAAACTGCCTGGCACAGCAATTGCCCGGCTTTCTTGTAACGCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATaaaa                                                                                                                                                                                          <  2:510019/278‑1 (MQ=255)
                                                                                      aTCGTTAAAACTGCCTGGCACAGCAATTGCCCGGCTTTCTTGTAACGCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGaa                                                                                                                                                                                                >  3:105890/1‑269 (MQ=255)
                                                                                        cGTTAAAAATGCCTGGGACAGCAATTGCCCGGCTTTCTTGTAACGCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAg                                                                                                                                                                                        <  1:638207/275‑1 (MQ=255)
                                                                                          ttAAAACTGCCTGGCACAGCAATTGCCCGGCTTTCTTGTAACGCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATaa                                                                                                                                                                                            <  1:105891/269‑1 (MQ=255)
                                                                                                             cAATTGCCCGGCTTTCTTGTAACGCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGATGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAAGGGAAACAAAAAGAACTGACACCGAGATCAAAAAAct                                                                                                                                                                >  2:278810/1‑277 (MQ=255)
                                                                                                                   cccGGCTTTCTTGTAACGCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCaaa                                                                                                                                                             <  1:724701/275‑1 (MQ=255)
                                                                                                                              tGTAGCGCGCTTTCCCACCCACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCca                                                                                                                                               <  2:436566/278‑1 (MQ=255)
                                                                                                                                tAACGCGCTTTCCCCCCAACCCTGATCACTTCCACAGTTTTCCCGATCCAGACTGAATGCCCACATGCCTTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCcaca                                                                                                                                             <  4:435853/278‑1 (MQ=255)
                                                                                                                                tAACGCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCTATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCcaca                                                                                                                                             <  2:589407/278‑1 (MQ=255)
                                                                                                                                 aaCGCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCca                                                                                                                                               <  3:397189/275‑1 (MQ=255)
                                                                                                                                   cgcgCCTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAAACTGAATGCCCACAGGCCGTCGAGTTTATTGATTTCACGGGTTGGGGTTTCTACAGGACGGAACATAAGGGAATCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTTATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCcaca                                                                                                                                             <  1:17048/275‑1 (MQ=255)
                                                                                                                                    gcgcTTTCCCACCAACGCTGATCAATTCCACAGTTCTCGCGATCCAGACTGGATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCg                                                                                                                                          <  2:402046/277‑1 (MQ=255)
                                                                                                                                      gcTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGc                                                                                                                                           <  1:157185/274‑1 (MQ=255)
                                                                                                                                          tCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCACGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGat                                                                                                                                      >  1:265213/1‑275 (MQ=255)
                                                                                                                                                  aCGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGAAATAGATCg                                                                                                                              >  3:11342/1‑275 (MQ=255)
                                                                                                                                                       gATCAATTCCACAGTTTTCGCGATCCAGACTGAATTCCCACAGGCAGTCTAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTa                                                                                                                         <  3:265212/275‑1 (MQ=255)
                                                                                                                                                        aTCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGATGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGata                                                                                                                                     >  3:347126/1‑262 (MQ=255)
                                                                                                                                                            aTTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGa                                                                                                                                 <  1:347127/262‑1 (MQ=255)
                                                                                                                                                                  caGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAGTAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAACAGGAAATAAAAAGAACTCACCCCGCACACAAAAAACCAAAAAAGGCAATACCAACAGCATGAAATAGAGCGAATAAATCTTTAAAACAga                                                                                                           >  4:59754/1‑277 (MQ=255)
                                                                                                                                                                  caGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATAcc                                                                                                                                                 >  1:426771/1‑240 (MQ=255)
                                                                                                                                                                      tttCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCcaca                                                                                                                                             <  3:426770/240‑1 (MQ=255)
                                                                                                                                                                                        aTGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAg                                                                                                                                            >  4:240369/1‑223 (MQ=255)
                                                                                                                                                                                        aTGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAAAGGAAATAAAAAGAACTGACACAGCGATCAAAAAACCAAAAACTGCAATACGCACAGCCTGCTCTAGATCACATTAATCATTAAAACAGCCGTGACAGAAGACATaaaa                                                                                        >  1:383524/1‑275 (MQ=255)
                                                                                                                                                                                        aTGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGCAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCAACAGCTTGATATAGATCGCATTAATCTTTAAAACAGCGTTCACAGAAGCCAaaaaaaaa                                                                                     >  4:44174/1‑278 (MQ=255)
                                                                                                                                                                                         tGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGc                                                                                                                                           <  2:240369/223‑1 (MQ=255)
                                                                                                                                                                                                              tttGATTTCACGGGTTGGGGTTTCTACAGGACGCAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGGGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGTTCGAg                                                                <  2:211714/277‑1 (MQ=255)
                                                                                                                                                                                                                 gATTTCACGGGTTGGGGTTTCAACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTATTCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGTTCGa                                                                 <  1:449365/273‑1 (MQ=255)
                                                                                                                                                                                                                                     cTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGTTCGAGCGTATTGGGAACGATAAAc                                             >  1:101805/1‑273 (MQ=255)
                                                                                                                                                                                                                                      tACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGGCAACCTTTCAACTGATTAGTTAACCAATTCTTTGTTGCACACAGTTATCTGTGAGGAACCCATGGAAGAGAAATGAAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCCCAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGTTCGAGCGTATTGGGAACGATAAActct                                          <  1:10632/275‑1 (MQ=255)
                                                                                                                                                                                                                                      aaCAGGACATAAACTAAGAGACTCCTCATAAAGATAATAACACCGGTCGACCTTTAATCGGATTAATTAACCCATACTGAGTTGCACACAGTGATCTATGAGAAACCCATGGAAGAGAAATGCAAATAAAAAGAACTGACACCGCGGTCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAGACAGCGTTGTCAGAAGCCATAAAATAAGCAACCGAACGTTCGTTCGAGCGTATTGGGAACGATAAACTCTCa                                        <  4:278810/276‑1 (MQ=255)
                                                                                                                                                                                                                                       aCAGGACGGAACAGAAGGGACTCCACATTAAGAGAATAACACTGGTCAACCATTAATCTGATTAGTTAACCAATTCTTTGTTGCACACAGTTATCTGTGACAAACCCATGAAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATATATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGTTCGAGCGTATTGGGAACGATAAACTCTCAt                                       <  4:312748/277‑1 (MQ=255)
                                                                                                                                                                                                                                          ggACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCAAACGTTCGTTCGAGCGTATTGGGAACGATAAACTCCCATAACa                                   >  4:374384/1‑278 (MQ=255)
                                                                                                                                                                                                                                          ggACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGAGCAAAAAACCAAAAAATGCAATAACAACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGTTCCAGCGTATTGGGAACGGTAAACTATCATg                                      >  3:414424/1‑275 (MQ=255)
                                                                                                                                                                                                                                           gACGTAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAAc                                                                                                                                                                 >  1:337533/1‑151 (MQ=255)
                                                                                                                                                                                                                                           gACGTAACATAAGGAACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCAAACAGTTATCTGTGAGAAACCAATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGTTCGAGCGTATTGGGAACGATAAACTCTCATGACa                                   <  2:479799/277‑1 (MQ=255)
                                                                                                                                                                                                                                              gTAACATAAGGGACCCCTAAATAAAATTATAACACTGTGCAACCGTTAATCTGATTGGTGAACCAATTCTGTGTTGAACACAGTTAACTATGAAAAACACATGGAAGAGAAATAGAAATAAAAATAACTGACACAGCTATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGTTCGAGCGTATTGGGAACGATAAACTCTCATGACa                                   <  3:584582/274‑1 (MQ=255)
                                                                                                                                                                                                                                               tAACATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCaaa                                                                                                                                                             <  3:337532/151‑1 (MQ=255)
                                                                                                                                                                                                                                                aaCATAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGata                                                                                                                                     >  3:110885/1‑174 (MQ=255)
                                                                                                                                                                                                                                                 aCATAAAGGACTCCACATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAAACCATGGAAAAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGTTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCt                            <  2:255588/278‑1 (MQ=255)
                                                                                                                                                                                                                                                    tAAGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGa                                                                                                                                 <  1:110886/174‑1 (MQ=255)
                                                                                                                                                                                                                                                     aaGGGACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAAGACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCAATAAAATAAGCAACCGAACGTTAGTTCGAGCGAATGGGGAACGATAAACTCTCATGACATATggaaaaag                        >  4:11487/1‑272 (MQ=255)
                                                                                                                                                                                                                                                       gggACTCCTCATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGTTCGAGCGTATTGGGAACGATAAACCCTCATGACATATGGCTACa                         >  1:733647/1‑275 (MQ=255)
                                                                                                                                                                                                                                                           ctcctcATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGTTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGa                     >  1:606360/1‑275 (MQ=255)
                                                                                                                                                                                                                                                            tcctcATTAAGATAATAACACTGGTCAACCTTTAATCTTATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAg                                                                                                                                  >  4:509303/1‑165 (MQ=255)
                                                                                                                                                                                                                                                            tcctcATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTTCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGTTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAat                   >  2:215810/1‑276 (MQ=255)
                                                                                                                                                                                                                                                            tcctcATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCtg                                                                                                                                                                                                                           >  1:718180/1‑76 (MQ=255)
                                                                                                                                                                                                                                                            tcctcATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGa                                                                                                                                                                                                 >  2:376476/1‑102 (MQ=255)
                                                                                                                                                                                                                                                            tcctcATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCCAAACACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGTTCGAGCGTATTGGGAACGATAAACTCTAATGACATATGGCAACAGTGaa                    >  3:474597/1‑275 (MQ=255)
                                                                                                                                                                                                                                                            tcctcATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGTTCGAGCGTATTGGGAACGATAAAct                                            >  3:422237/1‑251 (MQ=255)
                                                                                                                                                                                                                                                            tcctcATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGTTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGaa                    >  3:491587/1‑275 (MQ=255)
                                                                                                                                                                                                                                                            tcctcATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGTTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGaa                    >  3:637116/1‑275 (MQ=255)
                                                                                                                                                                                                                                                            tcctcATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGTTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAatat                 >  2:445586/1‑278 (MQ=255)
                                                                                                                                                                                                                                                            tcctcATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGTTAGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACATTGaa                    >  1:543357/1‑275 (MQ=255)
                                                                                                                                                                                                                                                             cctcATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGaa                                                                                                                                                                                                <  4:376476/102‑1 (MQ=255)
                                                                                                                                                                                                                                                                cATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTgag                                                                                                                                                                                                                       <  3:718179/76‑1 (MQ=255)
                                                                                                                                                                                                                                                                cATTAAGATAATAACACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGTTCGAGCGTATTGGGAACGATAAACTCTCa                                        <  1:422238/251‑1 (MQ=255)
                                                                                                                                                                                                                                                                        taataacaCTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGTTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAAt     >  4:122612/1‑278 (MQ=255)
                                                                                                                                                                                                                                                                        taataacaCTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAAATGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGACATAAAATAAGCAAACGAACGTTCGTTCGAGCGTATTGGGAACGATAAACTCTCATGAAATATGGCAACAGTGAATATTTAGGGGGGagt     >  2:371195/1‑276 (MQ=255)
                                                                                                                                                                                                                                                                           taacaCTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGTTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATCTTTTGGGGGGAAt     >  3:724330/1‑275 (MQ=255)
                                                                                                                                                                                                                                                                           taacaCTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGTTCGAGCGGATTGGGAAGGAAAAATGTCCATGACATATGGCTACAGTGAATATTTGTGGGGGAAt     >  1:675292/1‑275 (MQ=255)
                                                                                                                                                                                                                                                                           taacaCTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGTTCGAGAGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGAGAAAATTTTGGGGGGAATtct  >  4:617762/1‑278 (MQ=255)
                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                                  
TGGCCTGCCCAACCTTTCGGTATAAAGACTTCGCGCTGATACCAGACGTTGCCCGCATAATTACGAATATCTGCATCGGCGAACTGATCGTTAAAACTGCCTGGCACAGCAATTGCCCGGCTTTCTTGTAACGCGCTTTCCCACCAACGCTGATCAATTCCACAGTTTTCGCGATCCAGACTGAATGCCCACAGGCCGTCGAGTTTTTTGATTTCACGGGTTGGGGTTTCTACAGGACGTAACATAAGGGACTCCTCATTAAGATAATAATACTGGTCAACCTTTAATCTGATTAGTTAACCAATTCTGTGTTGCACACAGTTATCTGTGAGAAACCCATGGAAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGTTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCT  >  NC_000913/1695827‑1696371

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A