Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I52 R1
|
239 |
220.4 |
11079197 |
93.2% |
10325811 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,791,137 |
A→G |
V70A (GTA→GCA) |
tdh ← |
L‑threonine 3‑dehydrogenase, NAD(P)‑binding |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,791,137 | 0 | A | G | 98.6%
| 729.1
/ ‑3.8
| 209 | V70A (GTA→GCA) | tdh | L‑threonine 3‑dehydrogenase, NAD(P)‑binding |
| Reads supporting (aligned to +/- strand): ref base A (2/1); new base G (98/108); total (100/109) |
| Fisher's exact test for biased strand distribution p-value = 6.08e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 217 total aligned reads displayed.
ACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTACCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCACTCATCCCAGTTATAGATGTGAACGTCAGTCCCGC > NC_000913/3791040‑3791233
|
accaccACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAAtacctgcc < 1:2988603/100‑1 (MQ=255)
ccaccaCGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGACCGCCGATCTTGCAGCCTTTCACTTCCTGACCAATACCTGCCa > 2:695166/1‑100 (MQ=255)
accacGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACt > 2:5378026/1‑100 (MQ=255)
ccacGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCAcag > 2:1459385/1‑98 (MQ=255)
acGACAGTTGCGGAAATGACCGCAGGTGATATGGCCTTCGCCAGAAACGCGATTGCGGAGCTTGAAGAATTTCACTTCCTGATCAATACCTGCAACTTCa > 2:3894252/1‑100 (MQ=255)
gACAGTTGCGGCAATGACCACAGGTGTTATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGGCTTTCACTTCCTGACCAATTCCTGCCACTGCAcg < 2:1894542/100‑2 (MQ=255)
cAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGa > 1:1602040/1‑100 (MQ=255)
aGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGAc < 1:1951535/100‑1 (MQ=255)
gTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACa > 1:881879/1‑100 (MQ=255)
gTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACa < 1:4364774/100‑1 (MQ=255)
ttGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACat < 2:2664598/100‑1 (MQ=255)
ttGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACat < 2:3814912/100‑1 (MQ=255)
cGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATAtt < 1:5383528/100‑1 (MQ=255)
ggCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTc > 2:2569948/1‑100 (MQ=255)
aaTGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATg > 1:1659619/1‑100 (MQ=255)
aaTGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATg > 2:1211147/1‑100 (MQ=255)
aTGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATgg < 1:2489620/100‑1 (MQ=255)
aTGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTAACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATgg > 1:5427780/1‑100 (MQ=255)
tGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGc < 2:2158246/100‑1 (MQ=255)
tGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGc < 2:4819176/100‑1 (MQ=255)
tGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGc < 1:3278005/100‑1 (MQ=255)
gACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGcc > 1:4487779/1‑100 (MQ=255)
gACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGcc > 2:740573/1‑100 (MQ=255)
aCCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGccc > 2:3924476/1‑100 (MQ=255)
aCCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATCGccc > 2:3591341/1‑100 (MQ=255)
ccACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCa > 1:4998520/1‑100 (MQ=255)
caGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGa > 1:1986049/1‑100 (MQ=255)
ggTGATATGGCCTTCGCCAGAAAGGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACTTGCGACTTCACCGACATATTAATGGCCCACGAcc > 2:1240683/1‑100 (MQ=255)
gTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCa > 1:5028167/1‑100 (MQ=255)
tGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCAt < 2:5164061/100‑1 (MQ=255)
gATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATc < 2:1582550/100‑1 (MQ=255)
atatGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCg < 2:2464050/100‑1 (MQ=255)
atatGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCg < 1:2255143/100‑1 (MQ=255)
ctGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGc < 1:214778/99‑1 (MQ=255)
ggCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCAc > 1:1255150/1‑100 (MQ=255)
gCCTTCGCCGGAAACCCGATCGCCGTGCTTGACGCCTTTGACGTCCGTACCAGTCCCTGCTACTTCGCCGACATAGTCATGGCGTACGACCATCGGCAcc < 2:3244218/100‑1 (MQ=255)
gCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGACTTTCACTTCCTGACCAAGACCTGCCAGTTCACCGACATGTTCATGGCCCACGACCATCGGCAcc > 1:5174155/1‑100 (MQ=255)
cTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCgg < 1:5093259/100‑1 (MQ=255)
cTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCgg < 1:5276665/100‑1 (MQ=255)
cTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCgg > 1:2879964/1‑100 (MQ=255)
cGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGAt > 1:109963/1‑100 (MQ=255)
gCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATTGGCACCGGGATg > 1:1850473/1‑100 (MQ=255)
ccAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCTCTTCGCCGACATATTCATGGCCCACGACCGTCGGCACCGGGATgg < 1:4835028/100‑1 (MQ=255)
ccAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATgg > 1:5532279/1‑100 (MQ=255)
cAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGt < 1:2595071/100‑1 (MQ=255)
cAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGt > 1:964734/1‑100 (MQ=255)
gAAACGCGATCGCCGATCTTGAAGCCTTTCACTCCCTGACCAATACCTACCACTTCACCCACATATTCATGGCCCACGACCATCGGCACCGGGAGGGatt > 2:4555295/1‑100 (MQ=255)
aaaCGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGtttt < 1:4803568/100‑1 (MQ=255)
aCGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGtttttt > 1:2634061/1‑100 (MQ=255)
gcgATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGc > 1:1188644/1‑100 (MQ=255)
gcgATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGc > 1:1314711/1‑100 (MQ=255)
cgATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCg < 1:35084/100‑1 (MQ=255)
cgATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCg < 1:2910001/100‑1 (MQ=255)
cgATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCg < 1:5109551/100‑1 (MQ=255)
gATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGa > 1:3424544/1‑100 (MQ=255)
gATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGG‑TTTTTGCGAc < 1:1477297/100‑1 (MQ=255)
aTCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGAc > 1:2412914/1‑100 (MQ=255)
aTCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGAc < 1:2694187/100‑1 (MQ=255)
tCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGAcc < 2:127539/100‑1 (MQ=255)
tCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGAcc < 2:2837433/100‑1 (MQ=255)
cGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCa < 1:59394/100‑1 (MQ=255)
cGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCa > 2:24569/1‑100 (MQ=255)
cGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCa > 2:2748640/1‑100 (MQ=255)
gCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCAc > 2:5476307/1‑100 (MQ=255)
gCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCAc > 1:3919328/1‑100 (MQ=255)
ccGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCACt > 2:4303045/1‑100 (MQ=255)
ccGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCACt < 2:4870232/100‑1 (MQ=255)
cGATCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCACTc > 1:67087/1‑100 (MQ=255)
tCTTGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCACTCATc < 2:1697292/100‑1 (MQ=255)
tGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCACTCATCCCa > 1:748537/1‑100 (MQ=255)
tGAAGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCACTCATCCCa > 1:1237765/1‑100 (MQ=255)
aaGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCACTCATCCCAGt < 2:4471130/100‑1 (MQ=255)
aaGCCTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCACTCATCCCAGt < 2:3726024/100‑1 (MQ=255)
cTTTCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCACTCATCCCAGTtata > 2:4277095/1‑100 (MQ=255)
tttCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCACTCCTCCCAGTTATAg > 1:4622888/1‑100 (MQ=255)
tttCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCACTCATCCCAGTTATAg < 1:3779066/100‑1 (MQ=255)
ttCACTTCCTGACCAATACCTACCACTTCACCGACATATTCATGGCCCACGACCATCGGCACTGGGATGGTTTTTTGCGACCACTCATCCCAGTTATAGa > 2:3999544/1‑100 (MQ=255)
tCACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCACTCATCCCAGTTATAGAt < 1:3258194/100‑1 (MQ=255)
cACTTCCTGACCAATCCCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCACTCATCCCAGTTATAGAtg < 2:3069829/100‑1 (MQ=255)
cACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCACTCATCCCAGTTATAGAtg < 2:3422802/100‑1 (MQ=255)
cACTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCACTCATCCCAGTTATAGAtg < 2:2008675/100‑1 (MQ=255)
cTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCACTCATCCCAGTTATAGAtgtg < 2:3334202/100‑1 (MQ=255)
cTTCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCACTCATCCCAGTTATAGAtgtg > 2:4620371/1‑100 (MQ=255)
tCCTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCACTCATCCCAGTTATAGATGTTaa > 2:2140143/1‑100 (MQ=255)
ccTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCACTCATCCCAGTTATAGATGTGAAc < 1:4316805/100‑1 (MQ=255)
cTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCACTCATCCCAGTTATAGATGTGAACg > 1:3084153/1‑100 (MQ=255)
cTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCACTCATCCCAGTTATAGATGTGAACg > 2:760689/1‑100 (MQ=255)
cTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCACTCATCCCAGTTATAGATGTGAACg > 1:4667337/1‑100 (MQ=255)
cTGACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCACTCATCCCAGTTATAGATGTGAACg < 2:4825085/100‑1 (MQ=255)
gACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACGACTCATCCCAGTTATAGATGTGAACGTc < 2:931844/100‑1 (MQ=255)
gACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCACTCATCCCAGTTATAGATGTGAACGTc > 2:4813760/1‑100 (MQ=255)
gACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCACTCATCCCAGTTATAGATGTGAACGTc < 1:3617005/100‑1 (MQ=255)
gACCAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCACTCATCCCAGTTATAGATGTGAACGTc < 1:98159/100‑1 (MQ=255)
ccAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCACTCATCCCAGTTATAGATGTGAACGTCAg < 1:4011994/100‑1 (MQ=255)
ccAATACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCACTCATCCCAGTTATAGATGTGAACGTCAg > 2:1310055/1‑100 (MQ=255)
aTACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTTCGACCACTCATCCCAGTTATAGATGTGAACGTCAGTcc > 2:4407377/1‑100 (MQ=255)
aTACCTGCCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCACTCATCCCAGTTATAGATGTGAACGTCAGTcc < 2:4036351/100‑1 (MQ=255)
acctgccACTTCACCGACGTATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCACTCATCCCAGTTATAGATGTGAACGTCAGTCCCg < 2:1789106/100‑1 (MQ=255)
cctgccACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCACTCATCCCAGTTATAGATGTGAACGTCAGTCCCGc > 1:789778/1‑100 (MQ=255)
cctgccACTTCACCGACATATTCATGGCACACGACCATCGGCACCGGGATGGTTTTTTGCGACCATTCATACCAGTTATAGATGTGAACGTCAGTCCCGc > 2:3230098/1‑100 (MQ=255)
|
ACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTACCACTTCACCGACATATTCATGGCCCACGACCATCGGCACCGGGATGGTTTTTTGCGACCACTCATCCCAGTTATAGATGTGAACGTCAGTCCCGC > NC_000913/3791040‑3791233
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
