Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F50 I1 R1
|
14 |
141.9 |
7085095 |
93.3% |
6610393 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,191,997 |
G→C |
P213P (CCC→CCG) |
thiG ← |
thiamine biosynthesis ThiGH complex subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,191,997 | 0 | G | C | 99.3%
| 503.9
/ ‑3.6
| 136 | P213P (CCC→CCG) | thiG | thiamine biosynthesis ThiGH complex subunit |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base C (74/61); total (74/62) |
| Fisher's exact test for biased strand distribution p-value = 4.56e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.94e-01 |
Only 100 of 136 total aligned reads displayed.
GGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACGGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGCGCGGCATGGCTGGGAACGCCGATGCCAGCA > NC_000913/4191901‑4192093
|
gtggCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGAt > 2:497227/1‑100 (MQ=255)
gtggCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGAt < 2:1880074/100‑1 (MQ=255)
gtggCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGAt < 1:216199/100‑1 (MQ=255)
ctggCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGAt < 1:1697220/99‑1 (MQ=255)
ggCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGAta > 2:1697226/1‑98 (MQ=255)
ggCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCg > 2:1001744/1‑100 (MQ=255)
ggCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCg > 2:1788978/1‑100 (MQ=255)
gCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGt > 2:188329/1‑100 (MQ=255)
tGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCcg < 2:1497645/100‑1 (MQ=255)
tGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCcg < 2:2873717/100‑1 (MQ=255)
aGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCcgcg < 1:2943207/100‑1 (MQ=255)
gCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCcgcgc > 2:3249720/1‑99 (MQ=255)
cAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACGGGATCGTCCGCGAc < 1:3371927/100‑1 (MQ=255)
cAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGAc > 1:3027074/1‑100 (MQ=255)
cAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGAc > 1:1342272/1‑100 (MQ=255)
aaaTAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCACGACgg < 2:367711/100‑1 (MQ=255)
aaTAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGc > 2:3098947/1‑100 (MQ=255)
aaCTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAAt < 2:3123075/100‑1 (MQ=255)
aaCTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAAt > 2:3436742/1‑100 (MQ=255)
cTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCg > 2:3381695/1‑100 (MQ=255)
cTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCg > 2:1429634/1‑100 (MQ=255)
cTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCg > 2:2635186/1‑100 (MQ=255)
tGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGc < 2:2879898/100‑1 (MQ=255)
cGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCTCCATGTTGACCGGATCGTCCGCGACGGCAATCGccn < 1:1294600/100‑2 (MQ=255)
cGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGCCCGGATCGTCCGCGACGGCAATCGCCg < 2:2247915/100‑1 (MQ=255)
cGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCg < 2:2509758/100‑1 (MQ=255)
ggCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGt > 2:389460/1‑100 (MQ=255)
gCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGCCCGGATCGTCCGCGACGGCAATCGCCGTa > 2:2095147/1‑100 (MQ=255)
gCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTa > 2:1785316/1‑100 (MQ=255)
gCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTc < 2:3381332/100‑1 (MQ=255)
gCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTc > 1:2238652/1‑100 (MQ=255)
gCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCCTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTc > 2:695781/1‑100 (MQ=255)
ccGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCAc < 2:156592/100‑1 (MQ=255)
cGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACt < 2:1625253/100‑1 (MQ=255)
cGGTCCGGACTGACGTGCCAGTAGGACTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACt < 1:291215/100‑1 (MQ=255)
ccGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAaca > 1:3072518/1‑100 (MQ=255)
ccGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAaca < 2:459546/100‑1 (MQ=255)
ccGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAaca < 1:3098927/100‑1 (MQ=255)
cGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAacac > 1:474525/1‑100 (MQ=255)
ggACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACAcc > 1:1220388/1‑100 (MQ=255)
ggACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACAcc < 1:1815686/100‑1 (MQ=255)
gACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACcg > 1:2299725/1‑100 (MQ=255)
cTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGATATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACcgcg > 1:1895304/1‑100 (MQ=255)
tGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTAGTCACTAACACCGCGt > 2:3489900/1‑100 (MQ=255)
gACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTc > 1:6300/1‑100 (MQ=255)
gACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTc < 1:650025/100‑1 (MQ=255)
aCGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCg < 2:162003/100‑1 (MQ=255)
cGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCgg > 2:1126915/1‑100 (MQ=255)
cGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCg > 1:557161/1‑99 (MQ=255)
tGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGcc > 1:921703/1‑100 (MQ=255)
ccAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGcccc > 2:1464367/1‑100 (MQ=255)
cAGTCGGCCTGCTTCCACCGCCCGCCGAAACGCCTTCGCCTTGTTGACCGGAGCGTCCGCTACGGCCATCTCCGTAGTCACTTACACCGCGTCGGcccct < 1:2950025/100‑2 (MQ=255)
cAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGccccc > 1:2912108/1‑100 (MQ=255)
cAGTAGGCCTGCTTCTACCGACAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGccccc > 1:2162807/1‑100 (MQ=255)
aGTAGGCCTGCTTCTACCGCCAGACGAAATGCCATCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCa > 1:3287082/1‑100 (MQ=255)
aGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCAttt < 1:3204709/100‑1 (MQ=255)
ggCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTc > 2:1535632/1‑100 (MQ=255)
gCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTcc < 1:2247031/100‑1 (MQ=255)
gCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTCGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTcc > 1:2172840/1‑100 (MQ=255)
ccTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCa > 1:2004401/1‑100 (MQ=255)
ccTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCATCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCa < 1:451395/100‑1 (MQ=255)
ntCTACCGCCAGACGAAATGCCTTCGCCATGTTGACCGTATCGTCCGCGACGGCAAACGCCGTATTCACTAACCCCGCGTCGGCCCCCATTTCCAGCGcc > 1:3047493/2‑100 (MQ=255)
tACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTgc > 2:1744474/1‑100 (MQ=255)
tACCGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTgc > 2:1744595/1‑100 (MQ=255)
cGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGcgcg > 1:2648072/1‑100 (MQ=255)
cGCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGcgcg < 1:1811956/100‑1 (MQ=255)
cGCCAGACGAAAAGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGcgcg > 2:2320997/1‑100 (MQ=255)
gCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGCGCgg > 2:3031200/1‑100 (MQ=255)
gCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGCGCgg > 1:2017403/1‑100 (MQ=255)
gCCAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGCGCgg > 1:709024/1‑100 (MQ=255)
cAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGCGCGGCa > 2:1999592/1‑100 (MQ=255)
cAGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGCGCGGCa > 2:236270/1‑100 (MQ=255)
aGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGCGCGGCAt > 1:1836343/1‑100 (MQ=255)
aGACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGCGCGGCAt > 2:2337473/1‑100 (MQ=255)
gACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGCGCGGCATg > 1:112107/1‑100 (MQ=255)
gACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGCGCGGCATg < 2:1342278/100‑1 (MQ=255)
gACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGCGCGGCATg > 1:3359837/1‑100 (MQ=255)
gACGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGCGCGGCATg < 2:1304357/100‑1 (MQ=255)
aCGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACCAACACCGCGTCGGCCCCCATTTCCAGCGCCTGCGCGGCATgg > 1:1348014/1‑100 (MQ=255)
cGAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGCGCGGCATGGc > 2:3498747/1‑100 (MQ=255)
gAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGCGCGGCATGGc < 1:2516989/99‑1 (MQ=255)
gAAATGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGCGCGGCATGGCt > 1:2403182/1‑100 (MQ=255)
aaaTGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGCGCGGCATGGCTg > 2:1168205/1‑100 (MQ=255)
aaTGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGCGCGGCATGGCTgg < 2:129273/100‑1 (MQ=255)
aTGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGCGCGGCATGGCTggg < 2:474527/100‑1 (MQ=255)
aTGCCTTCGCCATGTTGACCGGATCGGCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGCGCGGCATGGCTggg < 1:2196184/100‑1 (MQ=255)
tGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGCGCGGCATGGCTgggn < 1:885387/100‑2 (MQ=255)
tGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGCGCGGCATGGCTGGGa < 1:2592092/100‑1 (MQ=255)
tGCCTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGCGCGGCATGGCTGGGa < 1:1535626/100‑1 (MQ=255)
cTTCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGCGCGGCATGGCTGGGAAcn < 2:1801251/100‑2 (MQ=255)
tCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGCGCGGCATGGCTGGGAACGcc < 2:569215/100‑1 (MQ=255)
tCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGCGCGGCATGGCTGGGAACGcc < 1:345272/100‑1 (MQ=255)
tCGCCATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGCGCGGCATGGCTGGGAACGcc > 1:3422090/1‑100 (MQ=255)
ccATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGCGCGGCATGGCTGGGAACGCCGAt > 1:404239/1‑100 (MQ=255)
cATGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGCGCGGCATGGCTGGGAACGCCGATg < 2:1020603/100‑1 (MQ=255)
aTGTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGCGCGGCATGGCTGGGAACGCCGATGc > 1:387412/1‑100 (MQ=255)
gTTGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGCGCGGCATGGCTGGGAACGCCGATGCCa < 1:497225/100‑1 (MQ=255)
ttGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGCGCGGCATGGCTGGGAACGCCGATGCCAg < 1:1402995/100‑1 (MQ=255)
ttGACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGCGCGGCATGGCTGGGAACGCCGATGCCAg < 2:207096/100‑1 (MQ=255)
gACCGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGCGCGGCATGGCTGGGAACGCCGATGCCAGCa > 2:399527/1‑100 (MQ=255)
|
GGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACGGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCCATTTCCAGCGCCTGCGCGGCATGGCTGGGAACGCCGATGCCAGCA > NC_000913/4191901‑4192093
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
