Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F120 I0 R1
|
38 |
148.3 |
7410925 |
93.3% |
6914393 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,370,614 |
T→A |
22.3% |
intergenic (‑202/‑74) |
yjeH ← / → groS |
putative transporter/Cpn10 chaperonin GroES, small subunit of GroESL |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,370,614 | 0 | T | A | 22.3%
| 363.8
/ 92.7
| 173 | intergenic (‑202/‑74) | yjeH/groS | putative transporter/Cpn10 chaperonin GroES, small subunit of GroESL |
| Reads supporting (aligned to +/- strand): ref base T (64/70); new base A (13/26); total (77/96) |
| Fisher's exact test for biased strand distribution p-value = 1.43e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.99e-01 |
Only 100 of 174 total aligned reads displayed.
TGTGAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATCG > NC_000913/4370516‑4370713
|
tgtgAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTc > 2:2846230/1‑100 (MQ=255)
gaaatgtgaggtgaatcagggttttcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTc < 1:1603773‑M2/4‑1 (MQ=255)
gtgATGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAACTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGACa < 1:1161691/100‑1 (MQ=255)
tgtgaggtgaatcagggttttcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCa > 2:3367949‑M2/93‑100 (MQ=255)
tgaggtgaatcagggttttcacccgattttgtgctgatcagaattttttttttttttttcccttgaaggggcgaagcctcatccccatttGGTCACCAGc > 1:2655552‑M2/91‑100 (MQ=255)
tgaggtgaatcagggttttcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGc < 1:667113‑M2/10‑1 (MQ=255)
tGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGcc > 2:1846429/1‑100 (MQ=255)
gAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGACACCAGcc > 1:534895/1‑99 (MQ=255)
gtgaatcagggttttcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCggg < 2:694542‑M2/14‑1 (MQ=255)
aTCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGACACCAGCCggg > 1:3433400/1‑100 (MQ=255)
gaatcagggttttcacccgattttgtgctgatcagaattttttttcttttttccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCgg > 1:1545433‑M2/85‑97 (MQ=255)
gaatcagggttttcacccgattttgtgctgatcagaattttttttctttttcccccttgcaggggcgaagcctcatccccatttCGTCACCAGccgggta > 2:3638715‑M2/85‑98 (MQ=255)
aatcagggttttcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGaaa < 1:1620308‑M2/17‑1 (MQ=255)
gggTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAAc < 1:346967/100‑1 (MQ=255)
atcagggttttcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAAc < 2:2349445‑M2/18‑1 (MQ=255)
atcagggttttcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAAc > 1:945597‑M2/83‑100 (MQ=255)
tcagggttttcacccgattttgggctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAAcc < 2:3116148‑M2/19‑1 (MQ=255)
ggTTTTCACCGGGTTTTGTGCTGATCAGAATTTTTGTGCTGTTGCCCCCTTCAAGGGGCGAAGCCTCATCCCCAGT‑‑‑‑TGGTCACCAGCCGGGAAACCACGt < 1:3164418/100‑1 (MQ=255)
cagggttttcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCa < 2:1482832‑M2/20‑1 (MQ=255)
cagggttttcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCa > 1:1961401‑M2/81‑100 (MQ=255)
cagggttttcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCa > 2:1357437‑M2/81‑100 (MQ=255)
gggttttcacccgattttgtgctgatcagaattttttttttttttttctctttaaggggcgaagcctcatccccatttGTTCACCAGCCGGGAAACCACg > 1:2074614‑M2/79‑100 (MQ=255)
gttttcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTa < 1:2030323‑M2/24‑1 (MQ=255)
gttttcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTa > 2:376289‑M2/77‑100 (MQ=255)
ttttcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGtan < 1:3602951‑M2/25‑2 (MQ=255)
ttttcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTaa < 2:501553‑M2/25‑1 (MQ=255)
tttcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAg < 2:1414519‑M2/26‑1 (MQ=255)
tttcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAg > 2:667051‑M2/75‑100 (MQ=255)
tatcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAg > 2:2503876‑M2/75‑100 (MQ=255)
cccGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGACACCAGCCGGGAAACCACGTAAGc > 2:2793708/1‑100 (MQ=255)
cccGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCCCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGc > 2:2272917/1‑100 (MQ=255)
tcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCt > 1:1715343‑M2/73‑100 (MQ=255)
cacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTc < 2:1200895‑M2/29‑1 (MQ=255)
aTTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCg < 2:102524/100‑1 (MQ=255)
ttttGGGCTAATCAGAATTTTTTTTCTATTTCCCCCTTGAAGGCGCGAAGCCTCTTCCCCATTTCTCTGGTTACCAGCCGGGAAACCACGTAAg < 1:3254211/94‑1 (MQ=255)
ccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCgg < 2:2882665‑M2/32‑1 (MQ=255)
tttGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGACACCAGCCGGGAAACCACGTAAGCTCCGGc < 2:2482435/100‑1 (MQ=255)
ttttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTc < 1:3103987‑M2/36‑1 (MQ=255)
tgCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCa < 2:3450551/100‑1 (MQ=255)
gCTGATCAGAATTTTTTTTTTTTTTTTTTTTTTAAGGAGCGAAGCCTCATCTTC‑TTT‑‑‑TGTTTACCAGTCGTGAAACCACGTAACCTCCGGCTTCATCCa > 1:414822/1‑99 (MQ=255)
gtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCAccc < 2:284287‑M2/40‑1 (MQ=255)
gATCAGAATTTTTTTTCTTTTTTTCCTTTTAAGGTGCTAAGCCTCATCCCCATTTC‑‑‑‑GTCACCATCCGGGTAACCATCTAATCTCCGTCGTCACCCATAAc > 1:2680751/1‑100 (MQ=255)
gctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCAt < 2:3270046‑M2/42‑1 (MQ=255)
aTCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGACACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCAt > 2:568045/1‑100 (MQ=255)
tgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATaa > 2:1521471‑M2/57‑100 (MQ=255)
gatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCAtaan < 1:2256397‑M2/45‑2 (MQ=255)
gAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGACACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACa < 2:3054077/100‑1 (MQ=255)
gAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGACACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACa < 1:2643777/100‑1 (MQ=255)
atcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACa > 1:2196379‑M2/55‑100 (MQ=255)
tcagaatttttttttttttttccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAg > 1:454891‑M2/54‑100 (MQ=255)
tttttttCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGACACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATa < 2:1384197/100‑1 (MQ=255)
gaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATa > 2:229939‑M2/51‑100 (MQ=255)
aattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATAc < 1:1680869‑M2/51‑1 (MQ=255)
ttttctttttcCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACg < 2:173240/99‑1 (MQ=255)
ttctttttcCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGACACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGAc < 2:1529045/100‑1 (MQ=255)
ttttttttttttttccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACTCATAACTGATACGGACt > 1:507029‑M2/45‑100 (MQ=255)
ctttttcCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGACACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACtt > 2:1697265/1‑100 (MQ=255)
ttcCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTtctc < 1:2818027/100‑1 (MQ=255)
ctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTtctc < 1:555906‑M2/61‑1 (MQ=255)
tttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCa > 2:1856132‑M2/39‑100 (MQ=255)
ttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCaa < 2:1023986‑M2/63‑1 (MQ=255)
ttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCaa > 1:2133528‑M2/38‑100 (MQ=255)
tttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCaaa < 1:3317926‑M2/64‑1 (MQ=255)
ttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAg < 2:1974411‑M2/65‑1 (MQ=255)
ttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAg < 2:237938‑M2/65‑1 (MQ=255)
ttGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGACACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGgag < 1:3232052/100‑1 (MQ=255)
ccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGgag > 2:3090191‑M2/33‑100 (MQ=255)
tGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGACACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGgaga < 1:573462/100‑1 (MQ=255)
cccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGgaga < 1:859080‑M2/69‑1 (MQ=255)
cccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGgaga < 1:1498345‑M2/69‑1 (MQ=255)
ccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGagag < 2:2074627‑M2/70‑1 (MQ=255)
ccttgaaggggcgaagcctcatccccatatGGTCACCAGCCGGGAAACCACGTAAGCTACGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGagag < 1:391123‑M2/70‑1 (MQ=255)
ttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGtt < 1:1232176‑M2/72‑1 (MQ=255)
aGGGGCGAAGCCTCATCCCCATT‑‑‑‑TGGTCACCTGCCTGGAATCCACGTATGCTCCGGCTGCACCCATTACAGATACTGACTTTTTCAATGGTGAGTTAt > 1:304865/1‑98 (MQ=255)
gatctgggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTa < 1:3084723‑M2/73‑1 (MQ=255)
gggCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTAt > 2:1073480/1‑100 (MQ=255)
gggCGAAGCCTCATCCCCATTTCTCTGGACACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTa < 1:1022719/99‑1 (MQ=255)
gCGAAGCCTCATCCCCATTTCTCTGGACACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCa < 1:2793691/100‑1 (MQ=255)
ccgatctcTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCa < 1:907103/93‑1 (MQ=255)
cGAAGCCTCATCCCCATTTCTCTGGACACCAGCCGGGACACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCaa > 1:2286093/1‑100 (MQ=255)
gggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAgagttaagatc > 2:3084745‑M2/23‑95 (MQ=255)
gggcaaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACACATAACAGAAACGGACTTTCTACAAGGAGCGCTATCaa > 1:3134493‑M2/23‑99 (MQ=255)
gcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGa > 2:1304108‑M2/21‑100 (MQ=255)
cgaagcctcatcccaatatGGTCACCAGCCGGGAAACCATGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTAGCa < 1:3566858‑M2/76‑1 (MQ=255)
cTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCaagatcgg > 2:907108/1‑94 (MQ=255)
aagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAata < 2:186790‑M2/83‑1 (MQ=255)
tCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCg < 1:3563690/100‑1 (MQ=255)
ctcatcccgatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCg < 1:2467625‑M2/87‑1 (MQ=255)
ctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCg < 1:1527525‑M2/87‑1 (MQ=255)
cccATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTc < 1:2342517/100‑1 (MQ=255)
catccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCCAAGGAGAGTTATCAATGAATATTCGTc > 1:109432‑M2/12‑100 (MQ=255)
ccATTTCTCTGGACACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGAACTTTCTCAAAGAAGAGATATCAAAGAATATTCg > 1:1171690/1‑97 (MQ=255)
ttCTCTGGACACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTg < 1:1020577/100‑1 (MQ=255)
ctctGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTcagatcgg > 2:1960416/1‑93 (MQ=255)
atttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCa > 2:3152268‑M2/5‑100 (MQ=255)
tttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCAt < 2:2655567‑M2/97‑1 (MQ=255)
tGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGa < 2:2024862‑M2/99‑1 (MQ=255)
ggTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGAt > 2:790648/1‑100 (MQ=255)
gTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATc > 2:401683/1‑100 (MQ=255)
tCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATcg < 1:1787594/100‑1 (MQ=255)
|
TGTGAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATCG > NC_000913/4370516‑4370713
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
