Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F256 I1 R1
|
186 |
136.5 |
6958264 |
92.1% |
6408561 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,644,169 |
G→T |
P39T (CCC→ACC) |
rlmN ← |
dual specificity 23S rRNA m(2)A2503, tRNA m(2)A37 methyltransferase, SAM‑dependent |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,644,169 | 0 | G | T | 93.1%
| 450.0
/ 15.5
| 147 | P39T (CCC→ACC) | rlmN | dual specificity 23S rRNA m(2)A2503, tRNA m(2)A37 methyltransferase, SAM‑dependent |
| Reads supporting (aligned to +/- strand): ref base G (6/4); new base T (63/71); total (71/76) |
| Fisher's exact test for biased strand distribution p-value = 5.20e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 150 total aligned reads displayed.
AGTTTGCCGCGCAACACTTTGTTGATGTCGGTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGGTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGT > NC_000913/2644072‑2644263
|
aGTTTGCCGCGCAACACTTTGTTGATGTCGGTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGttt > 2:2543265/1‑100 (MQ=255)
tttGCCGCGCAACACTTTGTTGATGTCGGTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTtttt < 2:433659/100‑1 (MQ=255)
ttGCCGCGCAACACTTTGTTGATGTCGGTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGtttttt > 1:2720003/1‑100 (MQ=255)
ttGCCGCGCAACACTTTGTTGATGTCGGTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGtttttt < 2:2133507/100‑1 (MQ=255)
tGCCGCGCAACACTTTGTTGATGTCGGTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTc < 2:336224/100‑1 (MQ=255)
tGCCGCGCAACACTTTGTTGATGTCGGTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTc < 2:2513084/100‑1 (MQ=255)
gCCGCGCAACACTTTGTTGATGTCGGTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCa < 1:794876/100‑1 (MQ=255)
gCCGCGCAACACTTTGTTGATGTCGGTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCa < 1:1911262/100‑1 (MQ=255)
gCCGCGCAACACTTTGTTGATGTCGGTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCa < 1:1986011/100‑1 (MQ=255)
ccGCGCAACACTTTGTTGATGTCGGTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCAc < 1:986129/100‑1 (MQ=255)
ccGCGCAACACTTTGTTGATGTCGGTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCAc > 2:2689560/1‑100 (MQ=255)
cgcAACACTTTGTTGATGTCGGTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCAcc < 1:2968662/98‑1 (MQ=255)
cAACACTTTGTTGATGTCGGTCATCTCATCAAAGTTGTCGCAGCAATTGTGATACATCCACTTCATCTCCTGATCGGCGCGGAAGGTTTTTTCACCTaaa < 2:2437358/100‑1 (MQ=255)
acTTTGTTGATGTCGGTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCtt > 1:3019813/1‑100 (MQ=255)
cTTTGTTGATGTCGGTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACACCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCttt > 1:1955640/1‑100 (MQ=255)
tttGTTGATGTCGGTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTa < 2:2439827/100‑1 (MQ=255)
tttGTTGATGTCGGTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTa < 1:239992/100‑1 (MQ=255)
ttgttgATGTCGGTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTaa < 1:970331/100‑1 (MQ=255)
tgttgATGTCGGTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTaaa > 1:277741/1‑100 (MQ=255)
ttgATGTCTGTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTaaaaa < 2:1857469/100‑1 (MQ=255)
gATGTCGGTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAAc > 2:648048/1‑100 (MQ=255)
gATGTCGGTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAAc < 1:3300702/100‑1 (MQ=255)
gATGTCGGTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAAc > 2:88968/1‑100 (MQ=255)
tGTCGGTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTc > 2:2543362/1‑100 (MQ=255)
tCGGTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGTGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTcac > 1:641152/1‑98 (MQ=255)
tCGGTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTccc > 2:1268077/1‑100 (MQ=255)
tCGGTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTccc > 2:2721554/1‑100 (MQ=255)
cGGTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCg > 1:377584/1‑100 (MQ=255)
cGGTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCg < 2:1086454/100‑1 (MQ=255)
cGGTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCg < 2:222978/100‑1 (MQ=255)
ggTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGc > 2:1904990/1‑100 (MQ=255)
ggTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGc > 2:2659536/1‑100 (MQ=255)
ggTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGc < 1:2256839/100‑1 (MQ=255)
ggTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGc > 1:1121516/1‑100 (MQ=255)
gTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCa < 1:1159250/100‑1 (MQ=255)
atctcatcAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATct > 2:2017916/1‑100 (MQ=255)
tctcatcAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATctg > 1:2578872/1‑100 (MQ=255)
tctcatcAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATctg > 1:1042754/1‑100 (MQ=255)
ntcatcaAAGTTGTCGCAGCAATAGTCATACATCCCCTTCATCACCAGATCCCCACGGACGGCTTTTCCACCTAAATCCTTAACCAACTCCCGCATctcc > 1:480693/2‑98 (MQ=255)
ctcatcAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATctgc > 1:881655/1‑100 (MQ=255)
ctcatcAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATctgc > 1:1563037/1‑100 (MQ=255)
catcaAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATctgctg > 2:986203/1‑100 (MQ=255)
catcaAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATctgctg > 2:776299/1‑100 (MQ=255)
catcaAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATctgctg < 2:3242546/100‑1 (MQ=255)
atcaAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGa > 1:1444080/1‑100 (MQ=255)
tcaAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGAc > 1:2171077/1‑100 (MQ=255)
tcaAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGAc > 1:871815/1‑100 (MQ=255)
caAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACg > 1:1258224/1‑100 (MQ=255)
aaaGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACgg > 2:1481475/1‑100 (MQ=255)
agctctCGCAGCAATAGTGTTACATCCACTTCATCACCTGATCGGCGCCGAAGGTTTTTTCACCTAATTCTTTAAAAAACTCCCGCATCTGCTGACgg < 1:2750776/93‑1 (MQ=255)
tGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTgag < 1:684349/100‑1 (MQ=255)
tGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTgag < 1:986191/100‑1 (MQ=255)
gTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTgaga > 1:2139337/1‑100 (MQ=255)
tCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTgag < 1:562632/98‑1 (MQ=255)
tCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGAt > 1:1991550/1‑100 (MQ=255)
gcagcaATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATcc < 1:776288/100‑1 (MQ=255)
gcagcaATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATcc > 1:388153/1‑100 (MQ=255)
gcaATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCcagc < 1:2789690/100‑1 (MQ=255)
caATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCcagca > 1:1829252/1‑100 (MQ=255)
caATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCcagca > 1:3087232/1‑100 (MQ=255)
caAGAGTCATACATCCCCTTCATCACCTGATCGGCGCGGAAGGCTTTTTCACCTAAATCTGTCAAAAACTCCCGCATCTGCTGACGGTTGAGATCcagca < 1:9345/100‑1 (MQ=255)
tAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAgg > 1:2363132/1‑99 (MQ=255)
gTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTg < 1:2086188/100‑1 (MQ=255)
gTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGGTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTg > 2:538960/1‑100 (MQ=255)
gATACATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGAt > 1:3233330/1‑100 (MQ=255)
gATACATCCACTTCATCACCTGATCGGCGCGGAAGGGTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGAt > 1:2525929/1‑100 (MQ=255)
aCATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGAtttt < 2:2795301/100‑1 (MQ=255)
aCATCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGAtttt < 2:305278/100‑1 (MQ=255)
aTCCACTTCATCACCTGATCGGCGCTGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTc < 1:3462140/100‑1 (MQ=255)
tCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTcc < 2:448869/100‑1 (MQ=255)
tCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTcc < 2:2910601/100‑1 (MQ=255)
tCCACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTcc < 2:2872701/100‑1 (MQ=255)
ccACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCa > 1:3441948/1‑100 (MQ=255)
ccACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCa < 2:1829277/100‑1 (MQ=255)
cACTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCAt < 2:2574899/100‑1 (MQ=255)
aCTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATc > 1:1080219/1‑100 (MQ=255)
cTTCATCACCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCt < 1:1477406/100‑1 (MQ=255)
catcaCCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATGTGCTGACGGTTGAGATCCACCAGGTTTATTTTTCCATCttt > 1:1374371/1‑99 (MQ=255)
catcaCCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTc > 2:887699/1‑100 (MQ=255)
catcaCCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTc < 1:2420837/100‑1 (MQ=255)
atcaCCTGATCGGCGCGGAAGGGTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCg > 1:1847083/1‑100 (MQ=255)
tcaCCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCgt < 2:3352443/100‑1 (MQ=255)
caCCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCgtg > 1:153725/1‑100 (MQ=255)
caCCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCgtg < 2:377589/100‑1 (MQ=255)
caCCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCgtg < 2:138354/100‑1 (MQ=255)
aCCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCgtgg < 1:1290247/100‑1 (MQ=255)
aCCTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCgtgg > 2:1068989/1‑100 (MQ=255)
aCCTGATCGGCGCGGAAGGGTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCgtgg < 1:138120/100‑1 (MQ=255)
ccTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCgtggt < 2:984404/100‑1 (MQ=255)
ccTGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCgtgg > 2:2648810/1‑99 (MQ=255)
tGATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGa < 1:2543231/100‑1 (MQ=255)
gATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGAc < 2:2510308/100‑1 (MQ=255)
gATCGGCGCGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGAc > 1:452913/1‑100 (MQ=255)
ngcgcGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGttt > 2:3151483/2‑100 (MQ=255)
gcgcGGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGtttt > 1:693699/1‑100 (MQ=255)
gcgGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCa > 2:3001558/1‑100 (MQ=255)
cgGAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAg < 1:2647323/100‑1 (MQ=255)
ggAAGGTTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAgg < 2:1444102/100‑1 (MQ=255)
gAAGGGTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGgt > 1:209422/1‑100 (MQ=255)
aaGGTTTTTTCTCCTAAATCTTTAAAACACTCCCGCATCTGCTTACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAg < 1:2724178/97‑1 (MQ=255)
|
AGTTTGCCGCGCAACACTTTGTTGATGTCGGTCATCTCATCAAAGTTGTCGCAGCAATAGTGATACATCCACTTCATCACCTGATCGGCGCGGAAGGGTTTTTCACCTAAATCTTTAAAAAACTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGT > NC_000913/2644072‑2644263
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
