Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F212 I0 R1
|
246 |
122.0 |
6097616 |
93.1% |
5676880 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,840,547 |
T→C |
100% |
intergenic (+39/+2) |
yicS → / ← nepI |
putative periplasmic protein/putative transporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,840,547 | 0 | T | C | 98.7%
| 537.8
/ ‑3.2
| 156 | intergenic (+39/+2) | yicS/nepI | putative periplasmic protein/putative transporter |
| Reads supporting (aligned to +/- strand): ref base T (0/2); new base C (79/75); total (79/77) |
| Fisher's exact test for biased strand distribution p-value = 2.42e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.84e-01 |
Only 100 of 157 total aligned reads displayed.
TAATAATCAGAGCAATTATTGGGAAGCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCGAAGTCAGACCAATAT > NC_000913/3840451‑3840643
|
taataaTCTGAGCAATTATTGGGAAGCGTTGGGTAATATAGAATGCCCGGATATGTAAGACCAGCAACAACTACTGACCAACGCTTCTTTACTTGACATc < 1:1590388/100‑1 (MQ=255)
taataaTCAGAGCAATTATTGGGAATCGTTTGGTAAGGTAGAATGTCCGGTTATGTAAGAACAGCAACAACTGCTGACCAACGCTTCTTTACCTGACATc < 2:552135/100‑1 (MQ=255)
ataatCAGAGCAATTATTGTGAAGCGTTGGGTATTGTAGTATTTCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAg < 1:202265/100‑1 (MQ=255)
ataatCAGAGCAATTATTGGGAAGCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAg < 1:2802467/100‑1 (MQ=255)
aatCAGAGCAATTATTGGGAAGCGTTGGGTAAGGTAGAATGCCCGGATGTGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAgg > 2:2273605/1‑99 (MQ=255)
aatCAGAGCAATTATTGGGAAGCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGa < 2:2876146/100‑1 (MQ=255)
tCAGAGCAATTATTGGGAAGCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGAtt < 1:2365663/100‑1 (MQ=255)
agCAATTATTGGGAAGCGTTGGGTAGGGTAGAATGCCCGGATATGTAAGAACATCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATttctt < 2:2470444/100‑1 (MQ=255)
agCAATTATTGGGAAGCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGCCCAACGCTTCTTTACCTGACATCAGGATttctt < 2:2007223/100‑1 (MQ=255)
gCAATTATTGGGAAGCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATttcttc > 2:53855/1‑100 (MQ=255)
cAATTATTGGGAAGCGTTGGGTAAGGTAGAATGACCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCa > 2:1789857/1‑100 (MQ=255)
aaTTATTGGGAAGCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCAt < 1:1528271/100‑1 (MQ=255)
attGGGAAGCGTTGGGTAAGGTAGAATGCCAGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTc < 1:442963/100‑1 (MQ=255)
tGGGAAGCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCAc < 2:2195383/100‑1 (MQ=255)
gggAAGCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCAcc > 1:3034902/1‑100 (MQ=255)
gAAGCGTTGGGTAAGGTAGAATGCCCGGGTATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATAAGAATTTCTTCATTTTCACCtt > 1:745314/1‑100 (MQ=255)
gCGTTGTGTAAGGTAGAATGCCTGGATATGTAAGAACAGCAACCTCTACTGACCAACGCTTTTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGc < 2:1344589/100‑1 (MQ=255)
gCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGc < 1:3027994/100‑1 (MQ=255)
gCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGc < 2:2820027/100‑1 (MQ=255)
gCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGc < 2:2317443/100‑1 (MQ=255)
gCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGc < 1:193961/100‑1 (MQ=255)
cGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCa < 1:527222/100‑1 (MQ=255)
cGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCa > 1:2552583/1‑100 (MQ=255)
gTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAg < 1:293955/100‑1 (MQ=255)
gTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAAAAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTATTCATTTTCACCTTTGCAg > 2:740068/1‑100 (MQ=255)
tGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTa > 1:1557918/1‑100 (MQ=255)
gggTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTaa < 2:931171/100‑1 (MQ=255)
gggTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTaa > 2:211057/1‑100 (MQ=255)
ggTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAAc > 1:1750761/1‑100 (MQ=255)
ggTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAAc < 2:788946/100‑1 (MQ=255)
gTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAAcc < 2:967408/100‑1 (MQ=255)
gTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAAcc > 2:79927/1‑100 (MQ=255)
tAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACca < 2:2966539/100‑1 (MQ=255)
tAAGGTAGAATGCCCGAATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAAcaa < 2:1196366/100‑3 (MQ=255)
aaGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACcaa > 1:2615390/1‑100 (MQ=255)
aGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACcaac < 1:1177129/100‑1 (MQ=255)
aGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACcaac > 1:1789309/1‑100 (MQ=255)
aGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTAACTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACcaac > 2:427400/1‑100 (MQ=255)
ggTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCCCCTTTGCAGTAACcaaca < 2:1892080/100‑1 (MQ=255)
ggTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACcaaca > 2:1375041/1‑100 (MQ=255)
gTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACcaacaa > 1:210726/1‑100 (MQ=255)
aGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGGCATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATg > 2:1043999/1‑100 (MQ=255)
aGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATg < 2:2997268/100‑1 (MQ=255)
gAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGc < 1:1294314/100‑1 (MQ=255)
gAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGc < 1:2957037/100‑1 (MQ=255)
aTGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAg < 2:1014752/100‑1 (MQ=255)
tGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGt > 2:1616073/1‑100 (MQ=255)
gCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTc > 2:2869744/1‑100 (MQ=255)
ccGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAg > 1:347920/1‑100 (MQ=255)
cGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAg > 2:1668878/1‑99 (MQ=255)
tatGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGAATTTCTTCATTTTCAACTTTGCAGTAACCAACAATGCAGTCAGCAACa > 1:115209/1‑100 (MQ=255)
atGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACa > 1:1984324/1‑99 (MQ=255)
tGTAATAACAGCAACAACTATTAACCAACGATTATTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACAAACAATGCAGTAAGAAACAt > 2:1093679/1‑99 (MQ=255)
gTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCa > 2:2430904/1‑100 (MQ=255)
tAAGAACAGCAACAACTACTGACTAACGCTTCTTTACCTGACCTCAGCATTTCTTCATTTTCACCTTTCCACTACCCAACAATGCAGTCAGCAACATCaa > 2:1024886/1‑100 (MQ=255)
aGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAAtg < 1:89579/100‑1 (MQ=255)
aGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAAtg > 2:2936941/1‑100 (MQ=255)
gAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTACAGTAACCAACAATGAAGTCAGCAACATCAAtgt > 1:580869/1‑100 (MQ=255)
aCAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGc < 1:1048332/100‑1 (MQ=255)
cAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCAACTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGcc > 1:878317/1‑100 (MQ=255)
aGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCg < 1:393332/100‑1 (MQ=255)
aGCAACAACTACTGACCAACGCTTCGTTACCGGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCg < 2:232132/100‑1 (MQ=255)
gCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCgg < 2:59122/100‑1 (MQ=255)
aacaacTACTTACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGac < 2:59240/100‑1 (MQ=255)
aacaacTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAAAAATGCAGTCAGCAACATCAATGTGCCGGac > 1:995040/1‑100 (MQ=255)
actactGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGacaaca < 1:406099/100‑1 (MQ=255)
actactGACCAACGCTTCTTTACCTGACAACAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCATTCCGCAACATCAATGTGCCGGacaaca > 2:123882/1‑100 (MQ=255)
ctactGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACAt < 2:1839872/100‑1 (MQ=255)
ctactGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAATAACAAACAATACAGTCAGCAAAATCAATGTGCCGAac > 1:2530034/1‑95 (MQ=255)
actGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCa > 1:2221250/1‑100 (MQ=255)
ctGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCaa > 2:72359/1‑100 (MQ=255)
gACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACg > 2:2837668/1‑100 (MQ=255)
gACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACg < 2:1941138/100‑1 (MQ=255)
ccAACGCTTCTTTACCTGACATCAGGCTTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGc > 1:11763/1‑100 (MQ=255)
ccAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCATCAACATCAATGTGCCGGTCAACATCAACgtc < 1:2047925/100‑3 (MQ=255)
ccAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGc > 2:2219489/1‑100 (MQ=255)
ccAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGc > 2:2711005/1‑100 (MQ=255)
ccAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGCACAACATCAACGGc < 2:2083458/100‑1 (MQ=255)
ccAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATACAGTCAGCAACATCAATGTGCCGGACAACATCAACGGc > 2:611459/1‑100 (MQ=255)
cAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCg > 2:2660025/1‑100 (MQ=255)
cAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCg > 2:1327120/1‑100 (MQ=255)
aaCGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGc < 1:780309/98‑1 (MQ=255)
cGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCGAAg < 1:1048683/100‑1 (MQ=255)
cGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCGAAg > 1:2175780/1‑100 (MQ=255)
cGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCGAAg < 1:2501350/100‑1 (MQ=255)
gCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCGAAg < 2:48013/99‑1 (MQ=255)
cttcttTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCGAAGTc < 1:339462/100‑1 (MQ=255)
cttcttTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCGAAGTc > 1:1094427/1‑100 (MQ=255)
ttcttTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCGAAGTCa < 2:196131/100‑1 (MQ=255)
cttTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCGAAGTCAGa < 2:2584747/100‑1 (MQ=255)
cttTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCGAAGTCAGa > 1:58459/1‑100 (MQ=255)
tttACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCGAAGTCAGAc > 1:1969799/1‑100 (MQ=255)
ttACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCGAAGTCAGAcc < 1:1534137/100‑1 (MQ=255)
ttACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCGAAGTCAGAcc < 2:695129/100‑1 (MQ=255)
ttACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCGAAGTCAGAcc < 1:1439391/100‑1 (MQ=255)
ttACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCGAAGTCAGAcc < 1:2668323/100‑1 (MQ=255)
ccTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCGAAGTCAGACCAat > 1:52173/1‑100 (MQ=255)
ccTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAAGGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCGAAGTCAGACCaa < 1:625273/99‑1 (MQ=255)
cTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCGAAGTCAGACCAata > 2:1901435/1‑100 (MQ=255)
cTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCGAAGTCAGACCAata < 1:1242525/100‑1 (MQ=255)
|
TAATAATCAGAGCAATTATTGGGAAGCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCGAAGTCAGACCAATAT > NC_000913/3840451‑3840643
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
