Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A12 F204 I0 R1
|
247 |
174.3 |
8556966 |
94.2% |
8060661 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,004,515 |
G→C |
100% |
G61G (GGC→GGG) |
yigI ← |
4HBT thioesterase family protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,004,515 | 0 | G | C | 51.5%
| 23.6
/ 278.8
| 174 | G61G (GGC→GGG) | yigI | 4HBT thioesterase family protein |
| Reads supporting (aligned to +/- strand): ref base G (41/43); new base C (41/48); total (83/91) |
| Fisher's exact test for biased strand distribution p-value = 7.62e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 |
Only 100 of 177 total aligned reads displayed.
GTAGTTCATCTTCACTGATGGTTTCGTGGCGGGTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCGCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGCGAACTCTTTTTCGTAACGCTCCAGTTCCATCCCC > NC_000913/4004421‑4004614
|
gTAGTTCATCTTCACTGATGGTTTCGTGGCGGGTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCCCCGTg < 2:587522/100‑1 (MQ=255)
cATCTTCACTGATGGTTTCGTGGCGGGTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCTATTACCCCCCCGtcc > 1:3940026/1‑93 (MQ=255)
cATCTTCACTGATGGTTTCGTGGCGGGTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCGCCGTGCAAAAt < 2:1252999/100‑1 (MQ=255)
cATCTTCACTGATGGTTTCGTGGCGGGTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAAt > 1:3455162/1‑100 (MQ=255)
aTCTTCACTGATGGTTTCGTGGCGGGTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATg < 2:3879401/100‑1 (MQ=255)
cTTCACTGATGGTTTCGTGGCGGGTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCGCCGTGCAAAATGCt > 2:2590921/1‑100 (MQ=255)
ttCACTGATGGTTTCGTGGCGGGTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCGCCGTGCAAAATGCtt > 2:3598578/1‑100 (MQ=255)
tCACTGATGGTTTCGTGGCGGGTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGCCATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCttt > 2:2571716/1‑100 (MQ=255)
cACTGATGGTTTCGTGGCGGGTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCGCCGTGCAAAATGCTTTg < 2:3522433/100‑1 (MQ=255)
cACTGATGGTTTCGTGGCGGGTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTg > 1:1197427/1‑100 (MQ=255)
aCTGATGGTTTCGTGGCGGGTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCGCCGTGCAAAATGCTTTgc > 1:3457613/1‑100 (MQ=255)
aCTGATGGTTTCGTGGCGGGTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTgc > 2:3353305/1‑100 (MQ=255)
cTGATGGTTTCGTGGCGGGTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCGCCGTGCAAAATGCTTTgcg < 2:420585/100‑1 (MQ=255)
cTGATGGTTTCGTGGCGGGTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCGCCGTGCAAAATGCTTTgcg > 1:2680727/1‑100 (MQ=255)
cTGATGGTTTCGTGGCGGGTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTgcg < 1:711955/100‑1 (MQ=255)
tGATGGTTTCGTGGCGGGTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTgcgc > 1:2144920/1‑100 (MQ=255)
gATGGTTTCGTGGCGGGTTAAGGTACTTCCCACGCACACCAGAACGGCGGCGACATCCCGCGCCGACGCAATGACCCCGCCGTGCAAAATGCTTTGCGcc > 1:31265/1‑100 (MQ=255)
aTGGTTTCGTGGCGGGTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCGCCGTGCAAAATGCTTTGCGccc < 2:2749704/100‑1 (MQ=255)
aTGGTTTCGTGGCGGGTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGccc < 1:450046/100‑1 (MQ=255)
aTGGTTTCGTGGCGGGTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGccc < 2:241354/100‑1 (MQ=255)
ggTTTCGTGGCGGGTTAAGGTACTTCCCCCGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAg < 2:191906/100‑1 (MQ=255)
gTTTCGTGGCGGGTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCGCCGTGCAAAATGCTTTGCGCCCAGt > 2:230032/1‑100 (MQ=255)
gTTTCGTGGCGGGTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCGCCGTGCAAAATGCTTTGCGCCCAGt < 2:538980/100‑1 (MQ=255)
gTTTCGTGGCGGGTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGt < 1:2826627/100‑1 (MQ=255)
gTTTCGTGGCGGGTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGt > 2:2781906/1‑100 (MQ=255)
gTTTCGTGGCGGGTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGt < 2:3715875/100‑1 (MQ=255)
gTTTCGTGGCGGGTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGt < 2:4121728/100‑1 (MQ=255)
gTTTCGTGGCCGGTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCGCCGTGCAAAATGCTTTGCGCCCAg < 2:3167546/99‑1 (MQ=255)
ttCGTGGCGGGTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCGCCGTGCAAAATGCTTTGCGCCCAGTTg < 1:2159432/100‑1 (MQ=255)
ttCGTGGCGGGTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTg < 1:2922295/100‑1 (MQ=255)
cGTGGCGGGTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCGCCGTGCAAAATGCTTTGCGCCCAGTTGcc > 2:1959490/1‑100 (MQ=255)
gTGGCGGGTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCGCCGTGCAAAATGCTTTGCGCCCAGTTGccc < 2:198016/100‑1 (MQ=255)
gTGGCGGGTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGccc < 1:1030918/100‑1 (MQ=255)
gTGGCGGGTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGccc > 1:3224520/1‑100 (MQ=255)
tggctcgTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCGCCGTGCAAAATGCTTTGCGCCCAGTTGCcca < 1:1855847/94‑1 (MQ=255)
ggCGGGTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGCccac < 2:703532/100‑1 (MQ=255)
gTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCGCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACcatca > 2:2104224/1‑100 (MQ=255)
gTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCGCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACcatca > 1:33593/1‑100 (MQ=255)
ttAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACcatcat > 2:1346605/1‑100 (MQ=255)
aaGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTg < 2:2587432/100‑1 (MQ=255)
aaGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTg < 2:2795393/100‑1 (MQ=255)
aaGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTg > 1:577024/1‑100 (MQ=255)
aGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTgg > 1:1079737/1‑100 (MQ=255)
ggTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCGCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGc > 2:886656/1‑100 (MQ=255)
ggTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGc < 1:2206307/100‑1 (MQ=255)
aCTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGa > 2:4072186/1‑100 (MQ=255)
cTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCGCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGAt > 2:155601/1‑100 (MQ=255)
cTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGAt < 1:447427/100‑1 (MQ=255)
attCTCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGAGCCCGCCGTGCAAAAGGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGAt > 1:787972/2‑100 (MQ=255)
ttCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGAtt > 1:2335053/1‑100 (MQ=255)
tCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCGCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGAttt < 1:3155114/100‑1 (MQ=255)
ccgtggCACACCAGCCCGGCGGCGACAGGCAGGGCCGACGCAATGAACCCCCCGTGGAAAATGCGTTGCGCCCAGTTGCCCACCATCATTGGc < 1:4094780/88‑1 (MQ=255)
cccGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCGCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTa < 1:117327/98‑1 (MQ=255)
cACGCACACCAGACCGGCGGCGACATCTAGCGCCGACGCAATGACCCCGCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTa < 1:1977407/100‑1 (MQ=255)
gCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAg > 2:3981213/1‑100 (MQ=255)
acacCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGc > 1:600446/1‑100 (MQ=255)
cacCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCGCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGcc < 1:123839/100‑1 (MQ=255)
ccAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAg > 2:844597/1‑100 (MQ=255)
ccAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAg > 2:338328/1‑100 (MQ=255)
cAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCGCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGc < 1:595670/100‑1 (MQ=255)
cAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGc < 1:285117/100‑1 (MQ=255)
gACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCtg > 1:3603918/1‑100 (MQ=255)
aCCGGCGGCGACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCtgt > 1:2424660/1‑100 (MQ=255)
ccGGCGGCGACATCCAGCGCCGACGCAATGACCCCGCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCtgtg > 1:1830403/1‑100 (MQ=255)
ccGGCGGCGACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCtgtg < 2:4258159/100‑1 (MQ=255)
cggcggCGACATCCAGCGCCGACGCAATGACCCCGCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGc < 2:199759/100‑1 (MQ=255)
ggcggcGACATCCAGCGCCGACGCAATGACCCCGCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGCg > 1:3908351/1‑100 (MQ=255)
ggcggcGACATCCAGCGCCGACGCAATGACCCCGCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGCg > 2:2363537/1‑100 (MQ=255)
ggcggcGACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGCg > 2:2637379/1‑100 (MQ=255)
ggcgACATCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTTCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGCGaa > 1:3007584/1‑99 (MQ=255)
gcgACATCCAGCGCCGACGCAATGACCCCGCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGCGAAct < 1:173624/100‑1 (MQ=255)
tCCAGCGCCGACGCAATGACCCCGCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGCGAACTCttttt > 2:1495417/1‑100 (MQ=255)
tCCAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGCGAACTCttttt < 2:3455175/100‑1 (MQ=255)
ccAGCGCCGACGCAATGACCCCGCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGCGAACTCTTTTTc > 1:399899/1‑100 (MQ=255)
ccAGCGCCGACGCAATGACCCCGCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGCGAACTCTTTTTc < 2:2907658/100‑1 (MQ=255)
ccAGCGCCGACGCAATGACCCCGCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGCGAACTCTTTTTc > 2:2941723/1‑100 (MQ=255)
cAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGCGAACTCTTTTTCg < 2:600448/100‑1 (MQ=255)
cAGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGCGAACTCTTTTTCg < 2:1497792/100‑1 (MQ=255)
aGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGCGAACTCTTTTTCGt < 1:2740645/100‑1 (MQ=255)
aGCGCCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGCGAACTCTTTTTCGt < 2:3914897/100‑1 (MQ=255)
cgcCGACGCAATGACCCCGCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGCGAACTCTTTTTCGTaa > 2:41735/1‑100 (MQ=255)
cgcCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGCGATCTCTTTTTCGtta < 2:2898231/100‑3 (MQ=255)
gcCGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGCGAACTCTTTTTCGTAAc < 1:1255740/100‑1 (MQ=255)
ccGACGCAATGACCCCGCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGCGAACTCTTTTTCGTAAc > 1:981034/1‑99 (MQ=255)
ccGACGCAATGACCCCGCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGCGAACTCTTTTTCGTAACg < 2:1198385/100‑1 (MQ=255)
ccGACGCAATGACCCCGCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATCGGCTGATTTTTAATGTCTTTTTGTGCGAACTCTTTTTc > 1:241760/1‑94 (MQ=255)
cGACGCAATGACCCCGCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGCGAACTCTTTTTCGTaa < 1:4222037/97‑1 (MQ=255)
cGACGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGCGAACTCTTTTTCGTAACGc > 2:3424431/1‑100 (MQ=255)
cGCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGCGAACTCTTTTTCGTAACGCTcc < 1:1645652/100‑1 (MQ=255)
gCAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGCGAACTCTTTTTctttttttt > 1:550327/1‑89 (MQ=255)
cAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGCGAACTCTTTTTCGTAACGCTCCAg < 1:978303/100‑1 (MQ=255)
cAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGCGAACTCTTTTTCGTAACGCTCCAg > 1:1404970/1‑100 (MQ=255)
cAATGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGCGAACTCTTTTTCGTAACGCTCCAg < 1:2071757/100‑1 (MQ=255)
tGACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGCGAACTCTTTTTCGTAACGCTCCAGTTc < 2:3975113/100‑1 (MQ=255)
gACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGCGAACTCTTTTTCGTAACGCTCCAGTTcc > 2:3051490/1‑100 (MQ=255)
gACCCCCCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGCGAACTCTTTTTCGTAACGCTCCAGTTcc > 1:2863284/1‑100 (MQ=255)
aCCCCGCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGCGAACTCTTTTTCGTAACGCTCCAGTTCCa < 2:2088082/100‑1 (MQ=255)
ccccccCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGCGAACTCTTTTTCGTAACGCTCCAGTTCCAt > 2:481009/1‑100 (MQ=255)
cgccgTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGCGAACTCTTTTTCGTAACGCTCCAGTTCCATccc < 1:3557198/100‑1 (MQ=255)
gccgTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGCGAACTCTTTTTCGTAACGCTCCAGTTCCATcccc < 2:3749294/100‑1 (MQ=255)
|
GTAGTTCATCTTCACTGATGGTTTCGTGGCGGGTTAAGGTACTTCCCACGCACACCAGACCGGCGGCGACATCCAGCGCCGACGCAATGACCCCGCCGTGCAAAATGCTTTGCGCCCAGTTGCCCACCATCATTGGCTGATTTTTAAAGGCCAGCTGTGCGAACTCTTTTTCGTAACGCTCCAGTTCCATCCCC > NC_000913/4004421‑4004614
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
