Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A12 F56 I0 R1
|
312 |
170.3 |
8276235 |
93.7% |
7754832 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
2,457,953 |
T→C |
64.5% |
K403E (AAA→GAA) |
fadJ ← |
enoyl‑CoA hydratase/epimerase and isomerase/3‑hydroxyacyl‑CoA dehydrogenase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,457,953 | 0 | T | C | 64.5%
| 156.1
/ 145.3
| 155 | K403E (AAA→GAA) | fadJ | enoyl‑CoA hydratase/epimerase and isomerase/3‑hydroxyacyl‑CoA dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (24/31); new base C (58/42); total (82/73) |
| Fisher's exact test for biased strand distribution p-value = 9.52e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.17e-01 |
Only 100 of 156 total aligned reads displayed.
GTGAGCGGCGATATCACCAATCGGTAAAGATGACGTATTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTTCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTCCGTCGTTCCGGAGATTAATGCCAGCTGTTTGTCAC > NC_000913/2457855‑2458051
|
gtgAGCGGCGATATCACCAATCGGTAAAGATGACGTATTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTTc < 1:2423501/100‑1 (MQ=255)
tgAGCGGCGATATCACCAATCGGTAAAGATGACGTATTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTTCa > 2:2591271/1‑100 (MQ=255)
tgAGCGGCGATATCACCAATCGGTAAAGATGACGTATTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTCCa > 1:1548461/1‑100 (MQ=255)
gAGCGGCGATATCACCAATCGGTAAAGATGACGTATTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTTCaa < 2:11012/100‑1 (MQ=255)
gAGCGGCGATATCACCAATCGGTAAAGATGACGTATTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTCCaa < 2:3544985/100‑1 (MQ=255)
aGCGGCGATATCACCAATCGGTAAAGATGACGTATTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTCCAAt > 2:1737571/1‑100 (MQ=255)
aGCGGCGATATCACCAATCGGTAAAGATGACGTATTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTCCAAt > 1:2947451/1‑100 (MQ=255)
ggcgATATCACCAATCGGTAAAGATGACGTATTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTTCAATTCg > 1:613331/1‑100 (MQ=255)
ggcgATATCACCAATCGGTAAAGATGACGTATTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTCCAATTCg < 1:458675/100‑1 (MQ=255)
gcgATATCACCAATCGGTAAAGATGACGTATTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTTCAATTCga > 1:785398/1‑100 (MQ=255)
gATATCACCAATCGGTAAAGATGACGTATTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTCCAATTCgaga > 1:544228/1‑100 (MQ=255)
gATATCACCAATCGGTAAAGATGACGTATTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTCCAATTCgaga > 1:2699452/1‑100 (MQ=255)
tatCACCAATCGGTAAAGATGACGTATTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTCCAATTCGAGAtt > 2:1172955/1‑100 (MQ=255)
tCACCAATCGGTAAAGATGACGTATTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCAACCATCTGTTGTTCCAATTCGAGAtttt > 1:2997121/1‑100 (MQ=255)
cACCAATCGGTAAAGATGACGTCTTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTTCAATTCGAGATTTTc > 2:2399646/1‑100 (MQ=255)
cACCAATAGGTAAAGATGACGTATTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTGCCGCCACCATCTGTTGTTCCAATTCGAGATTTTc > 2:2174147/1‑100 (MQ=255)
aCCAATCGGTAAAGATGACGTATTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTTCAATTCGAGATTTTCa > 1:3570955/1‑100 (MQ=255)
aCCAATCGGTAAAGATGACGTATTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTCCACTTCGAGAttttga < 1:2809775/100‑3 (MQ=255)
cAATCGGTAAAGATGACGTATTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTTCAATTCGAGATTTTCaaa < 2:1544951/100‑1 (MQ=255)
ggTAAAGATGACGTATTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTTCAATTCGAGATTTTCAAACACCg > 2:1095069/1‑100 (MQ=255)
ggTAAAGATGACGTATTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCg > 1:3856123/1‑100 (MQ=255)
gTAAAGATGACGTATTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTTCAATTCGAGATTTTCAAACACCGc < 1:3636709/100‑1 (MQ=255)
tAAAGATGACGTATTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTTCAATTCGAGATTTTCAAACACCGCt > 2:104624/1‑100 (MQ=255)
aaaGATGACGTATTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTTCAATTCGAGATTTTCAAACACCGCtt > 2:1411663/1‑100 (MQ=255)
gATGACGTATTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCaa > 1:1953668/1‑100 (MQ=255)
tGACGTATTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTTCAATTCGAGATTTTCAAACACCGCTTCaata < 1:3568266/100‑1 (MQ=255)
gACGTATTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCaataa > 2:2858142/1‑100 (MQ=255)
cGTATTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTTCAATTCGAGATTTTCAAACACCGCTTCAATAATc < 2:3330754/100‑1 (MQ=255)
cGTATTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATc < 2:2043760/100‑1 (MQ=255)
gTATTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCa < 1:3040403/100‑1 (MQ=255)
gTATTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCa > 2:2343827/1‑100 (MQ=255)
gTATTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCa < 1:2527503/100‑1 (MQ=255)
tATTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAg > 2:1067681/1‑100 (MQ=255)
aTTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTTCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGa > 1:3907584/1‑100 (MQ=255)
aTTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAg > 2:279041/1‑99 (MQ=255)
aTTCGAAGCAAAGATGCTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCCTCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCACTAATCAGa > 2:830961/1‑100 (MQ=255)
ttCAAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAAATTCCGCCACCATCTGTTGTTCCAATTCGAGAATTTCAAACACCGCTTCAATAATCAGa > 2:1898012/1‑99 (MQ=255)
gAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTTCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATcgc > 1:597083/1‑100 (MQ=255)
gAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATcgc > 2:2254183/1‑100 (MQ=255)
aaGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTTCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATcgcg > 1:974904/1‑100 (MQ=255)
aGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGa > 2:1460129/1‑100 (MQ=255)
cAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATg > 1:1641097/1‑100 (MQ=255)
cAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATg > 1:3598246/1‑100 (MQ=255)
cAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATg > 2:2731405/1‑100 (MQ=255)
cAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATg > 2:2647025/1‑100 (MQ=255)
aaaGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTTCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATgg < 2:785392/100‑1 (MQ=255)
aGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTTCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGc < 1:3239039/100‑1 (MQ=255)
aGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTTCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGc < 1:682337/100‑1 (MQ=255)
gATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCa > 1:3553835/1‑100 (MQ=255)
aTGGTATGAGCGTCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCa < 1:1424044/99‑1 (MQ=255)
tATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGcc > 2:2496115/1‑100 (MQ=255)
aTGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCcg > 1:717545/1‑100 (MQ=255)
gcggcgCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTTCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGAt < 1:369946/100‑1 (MQ=255)
gcggcgCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGAt < 1:1278183/100‑1 (MQ=255)
cggcgCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATa < 1:2388277/100‑1 (MQ=255)
gcgcAATTTTGCTCAACTTCCGCCACCATCTGTTGTTTCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGt > 1:1730442/1‑100 (MQ=255)
cgcAATTTTGCTCAACTTCCGCCACCATCTGTTGTTTCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTc < 2:1756070/100‑1 (MQ=255)
cgcAATTTTGCTCAACTTCCGCCACCATCTGTTGTTTCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTc < 2:1669021/100‑1 (MQ=255)
cgcAATTTTGCTCAACTTCCGCCACCATCTGTTGTTTCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTc < 2:4134658/100‑1 (MQ=255)
cgcAATTTTGCTCAACTTCCGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTc < 1:1319150/100‑1 (MQ=255)
gcAATTTTGCTCAACTTCCGCCACCATCTGTTGTTTCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTcc > 1:2183778/1‑100 (MQ=255)
aaTTTTGCTCAACTTCCGCCACCATCTGTTGTTTCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTCcgt < 2:1848849/100‑1 (MQ=255)
aaTTTTGCTCAACTTCCGCCACCATCTGTTGTTTCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTCcgt < 1:2255495/100‑1 (MQ=255)
aaTTTTGCTCAACTTCCGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTc < 2:1386379/97‑1 (MQ=255)
aTTTTGCTCAACTTCCGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTCcgtc < 1:110288/100‑1 (MQ=255)
tGCTCAACTTCCGCCACCATCTGTTGTTTCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTCCGTCGTTc < 2:573838/100‑1 (MQ=255)
gCTCAACTTCCGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTCCGTCGTTcc > 2:3159609/1‑100 (MQ=255)
gCTCAACTTCCGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTCCGTCGTTcc > 2:339793/1‑100 (MQ=255)
cTCAACTTCCGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTCCGTCGTTCCg > 1:3504614/1‑100 (MQ=255)
cTCAACTTCCGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTCCGTCGTTCCg > 1:823020/1‑100 (MQ=255)
tCAACTTCCGCCACCATCTGTTGTTTCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTCCGTCGTTCCgg < 2:3540286/100‑1 (MQ=255)
tCAACTTCCGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTCCGTCGTTCCgg < 1:1023039/100‑1 (MQ=255)
ncAACTTCCGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTCCGTCGTTCCgg > 1:3654848/2‑100 (MQ=255)
cAACTTCCGCCACCATCTGTTGTTTCAATTCGAGACTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTCCGTCGTTCCGga > 2:376837/1‑100 (MQ=255)
cAACTTCCGCCACCATCTGTTGTTCCAATTCGCGACTTTCAAACACCGCCTCCATAATCAGATCGCGATGGGCAAAGCCGCGATAGTCCGTCGTTcc > 2:170857/1‑97 (MQ=255)
cAACTTCCGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTCCGTCGTTCCGga > 2:704034/1‑100 (MQ=255)
cAACTTCCGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCAATGGGCAAAGCCGCGATAGTCCGTCGTTCCgg > 2:1061098/1‑99 (MQ=255)
cAACTTCCGCCACCATCTGTCGTTTCAATCCGAGATTTTCAACCACCGCTTCAATAATCACATCGCGCTGGGCAACGCCGCGATAGTCCCTCCTTCCgg > 2:799841/1‑99 (MQ=255)
cTTCCGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTCCGTCGTTCCGGAGAt < 1:1092245/100‑1 (MQ=255)
ttCCGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTCCGTCGTTCCGGAGAtt < 1:4083650/100‑1 (MQ=255)
ttCCGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTCCGTCGTTCCGGAGAtt < 2:590528/100‑1 (MQ=255)
ccGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTCCGTCGTTCCGGAGATTaa < 2:2934785/100‑1 (MQ=255)
cGCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTCCGTCGTTCCGGCGATTaa > 1:3447686/1‑99 (MQ=255)
gCCACCATCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGCCAAAGCCGCGATAGTCCGTCGTTCCGGAGATTAATg > 2:2278643/1‑100 (MQ=255)
ccaccaTCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTCCGTCGTTCCGGAGATTAATGc > 1:335672/1‑100 (MQ=255)
ctccaTCTGTTGTTCCAATTCGAGATTTTCTAACAGCGCTTTAATAATCAGGTGGCGATGGACAAAGCCGCGATAGTCCGTCGTTCCGGAGATTAATGcc < 2:3127610/98‑1 (MQ=255)
caccaTCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTCCGTCGTTCCGGAGATTAATGcc < 1:328428/100‑1 (MQ=255)
ccaTCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTCCGTCGTTCCGGAGATTAATGCCAg < 1:893886/100‑1 (MQ=255)
ccaTCTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTCCGTCGTTCCGGAGATTAATGCCAg < 2:3614847/100‑1 (MQ=255)
caTCTGTTGTTTCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTCCGTCGTTCCGGAGATTAATGCCAGc < 2:1743483/100‑1 (MQ=255)
caTCTGTTGTTCCAATTCGAGATTTTCAAACACCGCGTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTCCGTCGTTCCGGAGATTAATGCCAGc > 1:2913957/1‑100 (MQ=255)
tCTGTTGTTTCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTCCGTCGTTCCGGAGATTAATGCCAGCTg < 1:104625/100‑1 (MQ=255)
tCTGTTGTTTCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTCCGTCGTTCCGGAGATTAATGCCAGCTg < 1:1461113/100‑1 (MQ=255)
cTGTTGTTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTCCGTCGTTCCGGAGATTAATGCCAGCTGt < 1:1999237/100‑1 (MQ=255)
tgttgtTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTCCTTCGTTCCGGAGATTAATGCCAGCTGtt > 2:3665286/1‑100 (MQ=255)
tgttgtTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTCCGTCGTTCCGGAGATTAATGCCAGCTGtt > 2:696766/1‑100 (MQ=255)
tgttgtTCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTCCGTCGTTCCGGAGATTAATGCCAGCTGtt > 1:3943575/1‑100 (MQ=255)
gttgttCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTACGTCGTTCCGGAGATTAATGCCAGCTGttt > 2:2767941/1‑100 (MQ=255)
ttgttCCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTCCGTCGTTCCGGAGATTAATGCCAGCTGTTTg < 1:3159628/100‑1 (MQ=255)
gttCCAATTCGAGATTTTCAAACACCGCTTCAAGAATCAGATCGCGATGGGCAAAGCCGCGATAGTCCGTAGTTCCGGAGATTAATGCCAGCTGTTTGTc > 2:2490825/1‑100 (MQ=255)
|
GTGAGCGGCGATATCACCAATCGGTAAAGATGACGTATTCGAAGCAAAGATGGTATGAGCGGCGCAATTTTGCTCAACTTCCGCCACCATCTGTTGTTTCAATTCGAGATTTTCAAACACCGCTTCAATAATCAGATCGCGATGGGCAAAGCCGCGATAGTCCGTCGTTCCGGAGATTAATGCCAGCTGTTTGTCAC > NC_000913/2457855‑2458051
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
