breseq  version 0.29.0  revision 8f9c342918e4
mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Predicted mutations
evidence position mutation freq annotation gene description
RA 36,231 T→C 100% intergenic (‑69/+40) caiD ← / ← caiC carnitinyl‑CoA dehydratase/putative crotonobetaine/carnitine‑CoA ligase
RA 53,012 A→G 24.2% G135G (GGT→GGC)  pdxA ← 4‑hydroxy‑L‑threonine phosphate dehydrogenase, NAD‑dependent
RA 106,554 A→G 55.3% intergenic (+98/‑3) ftsZ → / → lpxC GTP‑binding tubulin‑like cell division protein/UDP‑3‑O‑acyl N‑acetylglucosamine deacetylase
RA 129,360 G→T 24.8% intergenic (+24/+47) lpd → / ← yacH dihydrolipoyl dehydrogenase; E3 component of pyruvate and 2‑oxoglutarate dehydrogenases complexes; glycine cleavage system L protein; dihydrolipoamide dehydrogenase/DUF3300 family protein
RA 139,187 T→C 58.6% N680S (AAT→AGT)  gcd ← glucose dehydrogenase
RA 162,973 G→A 100% C290Y (TGT→TAT)  hrpB → putative ATP‑dependent helicase
RA 178,902 C→T 18.4% L84L (TTG→TTA)  mtn ← 5'‑methylthioadenosine/S‑adenosylhomocysteine nucleosidase
RA 179,327 A→T 27.6% I31F (ATC→TTC)  dgt → deoxyguanosine triphosphate triphosphohydrolase
JC 190,553 Δ14 bp 100% coding (680‑693/726 nt) rpsB → 30S ribosomal subunit protein S2
RA 216,568 C→T 100% A146T (GCC→ACC)  yaeF ← putative lipoprotein
RA 232,196 G→T 24.6% G91C (GGC→TGC)  yafE → putative S‑adenosyl‑L‑methionine‑dependent methyltransferase
RA 236,541 C→T 100% R159* (CGA→TGA)  dnaQ → DNA polymerase III epsilon subunit
RA 252,589 G→C 21.2% A97P (GCA→CCA)  yafO → mRNA interferase toxin of the YafO‑YafN toxin‑antitoxin system
RA 252,594 G→C 19.4% W98C (TGG→TGC)  yafO → mRNA interferase toxin of the YafO‑YafN toxin‑antitoxin system
RA 254,727 A→C 100% G330G (GGT→GGG)  pepD ← aminoacyl‑histidine dipeptidase (peptidase D)
RA 265,418 A→G 28.2% R42R (CGT→CGC)  ykfF ← CP4‑6 prophage; uncharacterized protein
RA 281,581 G→A 22.8% R135W (CGG→TGG)  yagA ← CP4‑6 prophage; putative DNA‑binding transcriptional regulator
RA 318,690 A→G 54.2% S438P (TCA→CCA)  rclA ← reactive chlorine stress species (RCS) resistance protein; pyridine nucleotide‑dependent disulfide oxidoreductase family
RA 331,668 A→G 49.4% intergenic (+172/‑703) betT → / → yahA choline transporter of high affinity/c‑di‑GMP‑specific phosphodiesterase
RA 335,166 T→A 19.5% intergenic (‑144/‑114) yahC ← / → yahD putative inner membrane protein/ankyrin repeat protein
RA 338,334 T→A 54.0% S4T (TCA→ACA)  yahG → DUF1116 family protein
RA 339,856 T→C 49.2% intergenic (+113/‑309) yahG → / → yahI DUF1116 family protein/carbamate kinase‑like protein
RA 344,961 T→C 56.0% N262N (AAT→AAC)  yahL → uncharacterized protein
RA 362,884 A→G 21.8% L99S (TTA→TCA)  lacY ← lactose permease
RA 364,024 C→T 26.6% R761H (CGC→CAC)  lacZ ← beta‑D‑galactosidase
RA 367,830 G→A 22.3% Y197Y (TAC→TAT)  mhpR ← mhp operon transcriptional activator
RA 383,477 G→A 26.8% G153G (GGC→GGT)  yaiP ← putative family 2 glycosyltransferase
RA 400,214 T→C 16.9% D237G (GAC→GGC)  ddlA ← D‑alanine‑D‑alanine ligase A
RA 401,440 T→G 54.3% S19A (TCG→GCG)  iraP → anti‑RssB factor, RpoS stabilzer during Pi starvation; anti‑adapter protein
RA 426,040 A→T 63.5% T344S (ACG→TCG)  queA → S‑adenosylmethionine:tRNA ribosyltransferase‑isomerase
RA 428,188 G→T 100% R181L (CGC→CTC)  secD → SecYEG protein translocase auxillary subunit
RA 432,771 T→G 56.3% R27R (CGA→CGC)  yajI ← putative lipoprotein
RA 459,256 T→C 16.7% D123D (GAT→GAC)  lon → DNA‑binding ATP‑dependent protease La
RA 459,642 A→G 20.0% E252G (GAA→GGA)  lon → DNA‑binding ATP‑dependent protease La
RA 497,139:1 (T)5→6 100% intergenic (+145/‑36) htpG → / → adk protein refolding molecular co‑chaperone Hsp90, Hsp70‑dependent; heat‑shock protein; ATPase/adenylate kinase
RA 520,993 T→G 100% V193G (GTC→GGC)  ybbP → putative ABC transporter permease
RA 524,866 A→G 47.4% T536A (ACC→GCC)  rhsD → Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
RA 532,380 A→G 23.3% intergenic (‑159/‑71) allS ← / → allA allD operon transcriptional activator/ureidoglycolate lyase, releasing urea
RA 555,549 T→C 59.1% R313R (CGT→CGC)  cysS → cysteinyl‑tRNA synthetase
RA 569,160 G→T 19.4% D87Y (GAC→TAC) ‡ ybcK → DLP12 prophage; putative recombinase
RA 569,161 A→C 18.4% D87A (GAC→GCC) ‡ ybcK → DLP12 prophage; putative recombinase
RA 654,560 A→C 16.4% intergenic (+18/+23) citB → / ← dcuC response regulator in two‑component regulatory system with CitA/anaerobic C4‑dicarboxylate transport
RA 654,563 C→G 15.5% intergenic (+21/+20) citB → / ← dcuC response regulator in two‑component regulatory system with CitA/anaerobic C4‑dicarboxylate transport
RA 654,566 G→T 15.8% intergenic (+24/+17) citB → / ← dcuC response regulator in two‑component regulatory system with CitA/anaerobic C4‑dicarboxylate transport
RA 658,153 A→G 51.5% pseudogene (123/195 nt) ybeM → pseudogene, C‑N hydrolase superfamily homology;putative enzyme; Not classified; putative amidase
RA 661,369 T→C 28.6% N4D (AAT→GAT)  ybeF ← LysR family putative transcriptional regulator
RA 662,636 T→G 26.3% T3P (ACC→CCC)  ybeD ← UPF0250 family protein
RA 676,403 C→T 56.5% A49T (GCC→ACC)  ybeQ ← Sel1 family TPR‑like repeat protein
RA 681,694 A→G 15.9% intergenic (+31/+29) djlC → / ← hscC J domain‑containing HscC co‑chaperone; Hsc56/Hsp70 family chaperone Hsc62; RpoD‑binding transcription inhibitor
RA 681,699 T→A 15.1% intergenic (+36/+24) djlC → / ← hscC J domain‑containing HscC co‑chaperone; Hsc56/Hsp70 family chaperone Hsc62; RpoD‑binding transcription inhibitor
RA 681,705 C→T 17.1% intergenic (+42/+18) djlC → / ← hscC J domain‑containing HscC co‑chaperone; Hsc56/Hsp70 family chaperone Hsc62; RpoD‑binding transcription inhibitor
RA 700,805 A→T 100% C264S (TGC→AGC)  nagC ← N‑acetylglucosamine‑inducible nag divergent operon transcriptional repressor
RA 720,946 C→T 100% intergenic (+106/+110) ybfK → / ← kdpE uncharacterized protein/response regulator in two‑component regulatory system with KdpD
RA 721,004 T→A 17.9% intergenic (+164/+52) ybfK → / ← kdpE uncharacterized protein/response regulator in two‑component regulatory system with KdpD
RA 721,006 T→A 18.1% intergenic (+166/+50) ybfK → / ← kdpE uncharacterized protein/response regulator in two‑component regulatory system with KdpD
RA 721,009 T→A 18.5% intergenic (+169/+47) ybfK → / ← kdpE uncharacterized protein/response regulator in two‑component regulatory system with KdpD
RA 721,011 T→A 17.8% intergenic (+171/+45) ybfK → / ← kdpE uncharacterized protein/response regulator in two‑component regulatory system with KdpD
RA 772,209 C→A 100% T251N (ACC→AAC)  cydA → cytochrome d terminal oxidase, subunit I
RA 796,681 C→A 63.8% A43D (GCC→GAC)  modC → molybdate ABC transporter ATPase; chlorate resistance protein
RA 801,422 G→A 65.5% A222T (GCA→ACA)  ybhH → putative PrpF family isomerase
RA 849,405 G→A 54.8% T231T (ACC→ACT)  rhtA ← threonine and homoserine efflux system
RA 850,995 T→G 15.1% intergenic (+30/+19) ompX → / ← opgE outer membrane protein X/OPG biosynthetic transmembrane phosphoethanolamine transferase
RA 850,996 C→A 15.3% intergenic (+31/+18) ompX → / ← opgE outer membrane protein X/OPG biosynthetic transmembrane phosphoethanolamine transferase
RA 850,998 G→A 16.5% intergenic (+33/+16) ompX → / ← opgE outer membrane protein X/OPG biosynthetic transmembrane phosphoethanolamine transferase
RA 851,094 G→A 25.9% P502S (CCG→TCG)  opgE ← OPG biosynthetic transmembrane phosphoethanolamine transferase
RA 868,748 Δ1 bp 100% coding (1229/1872 nt) gsiA → glutathione ABC transporter ATPase
RA 873,807 G→A 60.0% G277S (GGT→AGT)  yliE → putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase
RA 875,714 T→G 51.3% V127G (GTC→GGC)  yliF → putative membrane‑anchored diguanylate cyclase
RA 882,722 G→A 100% R5C (CGC→TGC)  deoR ← deoxyribose‑5‑phosphate‑inducible deoxyribose operon transcriptional repressor; repressor of nupG and tsx
RA 894,155 T→G 100% D124E (GAT→GAG)  potF → putrescine ABC transporter periplasmic binding protein
RA 905,720 C→A 18.1% L270M (CTG→ATG)  amiD → 1,6‑anhydro‑N‑acetylmuramyl‑L‑alanine amidase, Zn‑dependent; OM lipoprotein
RA 914,948 A→G 61.4% intergenic (‑91/+404) ybjE ← / ← aqpZ putative transporter/aquaporin Z
RA 926,180 A→G 15.0% intergenic (‑209/+45) serW ← / ← infA tRNA‑Ser/translation initiation factor IF‑1
RA 931,952 C→T 19.0% V33V (GTG→GTA)  trxB ← thioredoxin reductase, FAD/NAD(P)‑binding
RA 933,387 C→T 25.1% A55V (GCC→GTC)  ftsK → DNA translocase at septal ring sorting daughter chromsomes
RA 966,368 A→G 25.5% A683A (GCA→GCG)  ycaI → ComEC family inner membrane protein
RA 975,083 T→A 24.9% D255E (GAT→GAA)  mukF → chromosome condensin MukBEF, kleisin‑like subunit, binds calcium
RA 1,034,326 A→G 57.2% N358S (AAC→AGC)  hyaB → hydrogenase 1, large subunit
RA 1,064,160 T→C 16.2% L42P (CTG→CCG) ‡ yccE → uncharacterized protein
RA 1,064,161 G→A 16.1% L42L (CTG→CTA) ‡ yccE → uncharacterized protein
RA 1,100,233 G→A 100% intergenic (+39/‑63) ycdY → / → ycdZ redox enzyme maturation protein (REMP) chaperone for YcdX/DUF1097 family inner membrane protein
RA 1,105,806 T→C 51.7% intergenic (+81/‑14) ymdA → / → ymdB uncharacterized protein/O‑acetyl‑ADP‑ribose deacetylase; RNase III inhibitor during cold shock; putative cardiolipin synthase C regulatory subunit
RA 1,111,377 A→G 18.8% D172G (GAT→GGT)  opgH → OPG biosynthetic ACP‑dependent transmembrane UDP‑glucose beta‑1,2 glycosyltransferase; nutrient‑dependent cell size regulator, FtsZ assembly antagonist
RA 1,127,049 A→G 60.1% T82A (ACG→GCG)  yceM → putative oxidoreductase
RA 1,143,125 C→T 100% D415N (GAC→AAC)  rne ← endoribonuclease; RNA‑binding protein;RNA degradosome binding protein
RA 1,188,434 A→G 46.1% V448A (GTA→GCA)  phoQ ← sensory histidine kinase in two‑component regulatory system with PhoP
RA 1,197,340 T→C 23.3% T65A (ACT→GCT)  ymfD ← e14 prophage; putative SAM‑dependent methyltransferase
RA 1,197,739 A→G 100% S167P (TCC→CCC)  ymfE ← e14 prophage; putative inner membrane protein
RA 1,207,981 G→A 25.2% A161T (GCC→ACC)  stfP → e14 prophage; uncharacterized protein
RA 1,264,376 T→C 62.3% I221I (ATT→ATC)  hemA → glutamyl tRNA reductase
RA 1,292,944 T→C 100% intergenic (‑22/‑583) hns ← / → tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
RA 1,303,332 T→G 100% V145G (GTG→GGG)  oppB → oligopeptide ABC transporter permease
RA 1,369,793 G→A 20.9% E35E (GAG→GAA)  pspE → thiosulfate:cyanide sulfurtransferase (rhodanese)
RA 1,382,820 T→C 24.0% Y292H (TAT→CAT)  ompG → outer membrane porin G
RA 1,390,147 G→A 61.1% A151V (GCC→GTC)  mpaA ← murein peptide amidase A
RA 1,401,718 A→C 56.3% V19G (GTC→GGC)  abgT ← p‑aminobenzoyl‑glutamate transporter; membrane protein
RA 1,401,844 A→G 100% I471T (ATC→ACC)  abgB ← p‑aminobenzoyl‑glutamate hydrolase, B subunit
RA 1,406,093 A→G 16.5% I39V (ATC→GTC)  smrA → DNA endonuclease
RA 1,406,098 C→T 15.9% D40D (GAC→GAT)  smrA → DNA endonuclease
RA 1,407,859 A→G 18.7% intergenic (‑64/‑191) ydaM ← / → ydaN diguanylate cyclase, csgD regulator/putative Zn(II) transporter
RA 1,414,756 (T)6→5 100% coding (38/810 nt) recT ← Rac prophage; recombination and repair protein
RA 1,420,196 T→C 53.7% N16D (AAC→GAC)  racR ← Rac prophage; putative DNA‑binding transcriptional regulator
RA 1,434,402 T→C 58.8% intergenic (‑178/+556) ynaE ← / ← ttcC cold shock protein, Rac prophage/pseudogene, prophage Rac integration site ttcA duplication;Phage or Prophage Related
RA 1,434,459 C→T 100% intergenic (‑235/+499) ynaE ← / ← ttcC cold shock protein, Rac prophage/pseudogene, prophage Rac integration site ttcA duplication;Phage or Prophage Related
RA 1,446,972 Δ1 bp 100% coding (312/906 nt) feaR ← transcriptional activator for tynA and feaB
RA 1,448,947 A→C 26.4% T477P (ACG→CCG)  feaB → phenylacetaldehyde dehydrogenase
RA 1,462,065 T→G 60.7% G391G (GGT→GGG)  paaJ → 3‑oxoadipyl‑CoA/3‑oxo‑5,6‑dehydrosuberyl‑CoA thiolase
RA 1,470,558 G→A 20.5% pseudogene (42/3497 nt) ydbA → pseudogene, autotransporter homolog; interrupted by IS2 and IS30
RA 1,493,774 A→G 27.2% L435L (TTA→TTG)  trg → methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor
RA 1,498,892 A→T 16.6% intergenic (+17/‑46) ydcH → / → rimL DUF465 family protein/ribosomal‑protein‑L7/L12‑serine acetyltransferase
RA 1,498,894 C→G 16.6% intergenic (+19/‑44) ydcH → / → rimL DUF465 family protein/ribosomal‑protein‑L7/L12‑serine acetyltransferase
RA 1,498,896 A→T 17.2% intergenic (+21/‑42) ydcH → / → rimL DUF465 family protein/ribosomal‑protein‑L7/L12‑serine acetyltransferase
RA 1,501,912 T→A 100% I117I (ATT→ATA)  tehB → tellurite, selenium methyltransferase, SAM‑dependent; tellurite, selenium resistance protein
RA 1,505,561 T→C 54.0% M174V (ATG→GTG)  ydcO ← BenE family inner membrane putative transporter
RA 1,519,159 A→T 70.3% T45S (ACA→TCA)  curA → curcumin/dihydrocurcumin reductase, NADPH‑dependent
RA 1,530,076:1 (A)7→8 100% coding (155/483 nt) ydcD → putative immunity protein for RhsE
RA 1,547,395 A→G 26.3% intergenic (‑226/‑6) yddG ← / → fdnG aromatic amino acid exporter/formate dehydrogenase‑N, alpha subunit, nitrate‑inducible
RA 1,553,128 T→C 57.5% V237V (GTA→GTG)  adhP ← ethanol‑active dehydrogenase/acetaldehyde‑active reductase
RA 1,555,324 A→G 16.4% S116P (TCT→CCT)  maeA ← malate dehydrogenase, decarboxylating, NAD‑requiring; malic enzyme
RA 1,560,731 Δ1 bp 100% coding (199/1023 nt) ddpB ← D,D‑dipeptide ABC transporter permease
RA 1,580,094 C→T 100% D233N (GAT→AAT)  ydeM ← putative YdeN‑specific sulfatase‑maturating enzyme
RA 1,608,704 A→G 15.2% S107P (TCG→CCG)  yneE ← bestrophin family putative inner membrane protein
RA 1,608,707 C→T 15.1% D106N (GAT→AAT)  yneE ← bestrophin family putative inner membrane protein
RA 1,609,555 Δ1 bp 16.0% coding (1126/1452 nt) uxaB ← altronate oxidoreductase, NAD‑dependent
RA 1,609,561:1 +C 17.2% coding (1120/1452 nt) uxaB ← altronate oxidoreductase, NAD‑dependent
RA 1,620,224 C→G 15.0% intergenic (+17/+14) marB → / ← eamA periplasmic mar operon regulator/cysteine and O‑acetyl‑L‑serine efflux system
RA 1,620,227 C→G 15.4% intergenic (+20/+11) marB → / ← eamA periplasmic mar operon regulator/cysteine and O‑acetyl‑L‑serine efflux system
RA 1,642,062:1 +T 100% coding (208/213 nt) cspF → Qin prophage; cold shock protein
RA 1,658,592 C→T 20.2% A175V (GCC→GTC)  ynfE → putative selenate reductase, periplasmic
RA 1,665,195:1 (T)7→8 100% intergenic (+75/‑120) dmsD → / → clcB twin‑argninine leader‑binding protein for DmsA and TorA/H(+)/Cl(‑) exchange transporter
RA 1,673,475 A→G 50.4% G9G (GGT→GGC)  mdtJ ← multidrug efflux system transporter
RA 1,674,955 A→T 17.0% intergenic (+8/+17) tqsA → / ← pntB pheromone AI‑2 transporter/pyridine nucleotide transhydrogenase, beta subunit
RA 1,674,958 A→T 17.7% intergenic (+11/+14) tqsA → / ← pntB pheromone AI‑2 transporter/pyridine nucleotide transhydrogenase, beta subunit
RA 1,681,932 T→C 100% P33P (CCA→CCG)  ydgC ← GlpM family inner membrane protein
RA 1,701,585 Δ1 bp 100% coding (629/1173 nt) malY → PLP‑dependent beta‑cystathionase and maltose regulon regulator
RA 1,703,693 C→T 58.1% A206T (GCG→ACG)  ydgJ ← putative oxidoreductase
RA 1,707,029 A→G 28.9% V37V (GTA→GTG)  rsxC → SoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex
RA 1,712,306:1 (T)7→8 100% intergenic (+148/‑463) nth → / → dtpA DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)/dipeptide and tripeptide permease A
RA 1,712,518 (C)6→5 100% intergenic (+360/‑251) nth → / → dtpA DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)/dipeptide and tripeptide permease A
RA 1,728,444 C→A 100% T33N (ACC→AAC)  rnt → RNase T; exoribonuclease T; structured DNA 3' exonuclease; RNA processing; DNA repair
RA 1,757,688 T→A 19.5% intergenic (+31/+33) lpp → / ← ldtE murein lipoprotein/murein L,D‑transpeptidase
RA 1,764,687 T→C 16.6% intergenic (‑301/+247) sufA ← / ← ydiH Fe‑S cluster assembly protein/uncharacterized protein
RA 1,764,701 G→A 16.5% intergenic (‑315/+233) sufA ← / ← ydiH Fe‑S cluster assembly protein/uncharacterized protein
RA 1,770,203 T→A 16.3% intergenic (+17/‑412) ydiK → / → ydiL UPF0118 family inner membrane protein/putative HTH domain DNA‑binding protein
RA 1,770,204 C→G 16.0% intergenic (+18/‑411) ydiK → / → ydiL UPF0118 family inner membrane protein/putative HTH domain DNA‑binding protein
RA 1,770,205 T→A 16.0% intergenic (+19/‑410) ydiK → / → ydiL UPF0118 family inner membrane protein/putative HTH domain DNA‑binding protein
RA 1,778,470 A→G 56.5% Y278H (TAC→CAC)  ydiP ← putative DNA‑binding transcriptional regulator
RA 1,785,283 Δ1 bp 100% coding (1830/2379 nt) ppsA ← phosphoenolpyruvate synthase
RA 1,800,755 C→T 55.4% V606I (GTT→ATT)  thrS ← threonyl‑tRNA synthetase
RA 1,827,031 T→A 100% D410V (GAT→GTT)  astB ← succinylarginine dihydrolase
RA 1,865,682 G→C 15.5% intergenic (‑46/+44) yeaE ← / ← mipA aldo‑keto reductase, methylglyoxal to acetol, NADPH‑dependent/scaffolding protein for murein synthesizing machinery
RA 1,870,998 (T)6→5 100% coding (614/1476 nt) yeaI → putative membrane‑anchored diguanylate cyclase
RA 1,946,790 T→G 18.2% G180G (GGT→GGG)  yebB → DUF830 family protein
RA 1,965,088 C→T 15.5% V368V (GTG→GTA) ‡ flhB ← flagellin export apparatus, substrate specificity protein
RA 1,965,089 A→G 15.0% V368A (GTG→GCG) ‡ flhB ← flagellin export apparatus, substrate specificity protein
RA 1,971,761 T→C 23.3% T311A (ACC→GCC)  tar ← methyl‑accepting chemotaxis protein II
MC JC 1,978,503 Δ776 bp 100% insB1–insA insB1, insA
RA 1,983,761 C→T 100% E437K (GAA→AAA)  araG ← L‑arabinose ABC transporter ATPase
RA 1,988,339 C→T 56.9% Q40* (CAG→TAG)  yecR → lipoprotein, function unknown
RA 2,044,638 C→A 64.3% intergenic (+14/‑300) asnT → / → yeeJ tRNA‑Asn/putative adhesin
RA 2,071,321 A→G 100% intergenic (+110/‑218) yeeP → / → flu pseudogene, CP4‑44 prophage; 50S ribosome‑binding GTPase family;Phage or Prophage Related; putative histone/CP4‑44 prophage; antigen 43 (Ag43) phase‑variable biofilm formation autotransporter
RA 2,076,841 G→A 60.1% A9T (GCC→ACC)  yeeT → CP4‑44 prophage; uncharacterized protein
RA 2,090,124 C→G 15.3% intergenic (+78/‑68) hisL → / → hisG his operon leader peptide/ATP phosphoribosyltransferase
RA 2,090,126 C→T 15.0% intergenic (+80/‑66) hisL → / → hisG his operon leader peptide/ATP phosphoribosyltransferase
RA 2,090,860 G→A 55.0% A223A (GCG→GCA)  hisG → ATP phosphoribosyltransferase
RA 2,159,354 C→T 24.9% R323R (CGC→CGT)  mdtC → multidrug efflux system, subunit C
RA 2,161,946 A→G 26.4% A161A (GCA→GCG)  iceT → putative citrate/iron‑citrate/zinc‑citrate efflux transporter
RA 2,165,590 Δ1 bp 100% intergenic (+69/‑78) yegP → / → yegQ UPF0339 family protein/putative peptidase
RA 2,173,076 C→A 22.8% pseudogene (287/442 nt) gatC ← pseudogene, galactitol‑specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol‑specific enzyme IIC
RA 2,173,363 Δ2 bp 100% intergenic (‑1/+1) gatC ← / ← gatC pseudogene, galactitol‑specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol‑specific enzyme IIC/pseudogene, galactitol‑specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol‑specific enzyme IIC
RA 2,183,656 T→A 54.1% intergenic (‑5/+60) yegX ← / ← thiD putative family 25 glycosyl hydrolase/hydroxy‑methylpyrimidine kinase and hydroxy‑phosphomethylpyrimidine kinase
RA 2,191,432 C→T 100% G72S (GGC→AGC)  yehC ← putative periplasmic pilin chaperone
RA 2,197,365 G→A 28.5% pseudogene (892/2847 nt) yehH → DUF4132 family pseudogene; defective yehI paralog; molybdate metabolism regulator, first fragment; molybdate metabolism regulator, second fragment 2; yehI' molR mutations have phenotypes and the N‑terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function
RA 2,210,811 C→T 100% pseudogene (1712/2001 nt) yehQ → pseudogene
RA 2,235,656 T→C 15.7% I131T (ATC→ACC)  preA → dihydropyrimidine dehydrogenase, NADH‑dependent, subunit C
RA 2,239,199 T→C 52.1% N31D (AAC→GAC)  mglA ← methyl‑galactoside ABC transporter ATPase
RA 2,246,800 A→G 20.1% intergenic (‑31/+263) cirA ← / ← lysP colicin IA outer membrane receptor and translocator; ferric iron‑catecholate transporter/lysine transporter
RA 2,255,991 A→T 16.6% K213* (AAA→TAA) ‡ yeiL → putative transcriptional regulator
RA 2,255,992 A→T 16.8% K213I (AAA→ATA) ‡ yeiL → putative transcriptional regulator
RA 2,278,298 C→T 100% intergenic (‑61/+272) yejG ← / ← bcr uncharacterized protein/bicyclomycin/cysteine/sulfonamide efflux transporter
RA 2,286,139 A→T 15.5% intergenic (+3/‑72) yejM → / → proL essential inner membrane DUF3413 domain‑containing protein; lipid A production and membrane permeability factor/tRNA‑Pro
RA 2,286,142 T→A 16.1% intergenic (+6/‑69) yejM → / → proL essential inner membrane DUF3413 domain‑containing protein; lipid A production and membrane permeability factor/tRNA‑Pro
RA 2,286,145 A→T 15.2% intergenic (+9/‑66) yejM → / → proL essential inner membrane DUF3413 domain‑containing protein; lipid A production and membrane permeability factor/tRNA‑Pro
RA 2,299,499 A→G 54.9% L27S (TTA→TCA)  napH ← ferredoxin‑type protein
RA 2,307,386 A→T 77.8% D410E (GAT→GAA)  yojI ← microcin J25 efflux ABC transporter permease/ATPase
RA 2,386,365 T→A 28.6% F169Y (TTC→TAC)  yfbL → putative M28A family peptidase
RA 2,420,727 G→A 23.4% G36D (GGC→GAC)  yfcG → GSH‑dependent disulfide bond oxidoreductase
RA 2,436,937 A→T 100% D305E (GAT→GAA)  pdxB ← erythronate‑4‑phosphate dehydrogenase
RA 2,457,953 T→C 64.5% K403E (AAA→GAA)  fadJ ← enoyl‑CoA hydratase/epimerase and isomerase/3‑hydroxyacyl‑CoA dehydrogenase
RA 2,461,483 G→T 55.4% A60S (GCA→TCA)  fadL → long‑chain fatty acid outer membrane transporter
RA 2,469,656:1 (T)7→8 100% coding (526/1332 nt) gtrS → serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage
RA 2,491,264 T→A 16.5% E229D (GAA→GAT) ‡ oxc ← oxalyl CoA decarboxylase, ThDP‑dependent
RA 2,491,266 C→G 15.9% E229Q (GAA→CAA) ‡ oxc ← oxalyl CoA decarboxylase, ThDP‑dependent
RA 2,491,268 T→A 16.1% D228V (GAT→GTT)  oxc ← oxalyl CoA decarboxylase, ThDP‑dependent
RA 2,521,967 C→A 100% A171S (GCG→TCG)  xapR ← transcriptional activator of xapAB
RA 2,530,925 T→C 16.6% Q103Q (CAA→CAG)  zipA ← FtsZ stabilizer
RA 2,541,456 A→G 23.7% I75T (ATT→ACT)  cysW ← sulfate/thiosulfate ABC transporter permease
RA 2,560,317 A→C 15.2% N21H (AAT→CAT)  yffL → CPZ‑55 prophage; uncharacterized protein
RA 2,560,321 C→T 15.6% A22V (GCT→GTT)  yffL → CPZ‑55 prophage; uncharacterized protein
RA 2,560,326 A→G 15.4% T24A (ACA→GCA)  yffL → CPZ‑55 prophage; uncharacterized protein
RA 2,560,330 G→T 15.1% C25F (TGC→TTC)  yffL → CPZ‑55 prophage; uncharacterized protein
RA 2,563,518:1 (A)5→6 100% intergenic (+401/‑74) yffP → / → yffQ CPZ‑55 prophage; uncharacterized protein/CPZ‑55 prophage; uncharacterized protein
RA 2,564,525 G→A 100% M1M (ATG→ATA) † yffS → CPZ‑55 prophage; uncharacterized protein
RA 2,593,917 G→A 23.1% A648V (GCG→GTG)  tmcA ← elongator methionine tRNA (ac4C34) acetyltransferase
RA 2,596,874 Δ1 bp 15.8% intergenic (‑137/+31) ypfJ ← / ← purC putative neutral zinc metallopeptidase/phosphoribosylaminoimidazole‑succinocarboxamide synthetase
RA 2,596,879:1 +G 15.0% intergenic (‑142/+26) ypfJ ← / ← purC putative neutral zinc metallopeptidase/phosphoribosylaminoimidazole‑succinocarboxamide synthetase
RA 2,600,288 C→T 100% S128L (TCG→TTG)  gcvR → transcriptional repressor, regulatory protein accessory to GcvA
RA 2,632,584 A→T 17.2% intergenic (‑49/+20) guaA ← / ← guaB GMP synthetase (glutamine aminotransferase)/IMP dehydrogenase
RA 2,632,586 G→C 16.9% intergenic (‑51/+18) guaA ← / ← guaB GMP synthetase (glutamine aminotransferase)/IMP dehydrogenase
RA 2,632,588 A→T 17.5% intergenic (‑53/+16) guaA ← / ← guaB GMP synthetase (glutamine aminotransferase)/IMP dehydrogenase
RA 2,634,176 A→G 16.6% intergenic (‑106/‑56) guaB ← / → xseA IMP dehydrogenase/exonuclease VII, large subunit
RA 2,638,037 C→A 23.7% A206S (GCG→TCG)  bamB ← BamABCDE complex OM biogenesis lipoprotein
RA 2,715,439 T→C 55.6% L6S (TTA→TCA)  eamB → cysteine and O‑acetylserine exporter
RA 2,720,543 C→A 59.8% R197R (CGC→CGA)  pka → protein lysine acetyltransferase
RA 2,759,132 A→G 55.5% I50V (ATT→GTT)  yfjI → CP4‑57 prophage; uncharacterized protein
RA 2,759,497 T→C 58.5% C171C (TGT→TGC)  yfjI → CP4‑57 prophage; uncharacterized protein
RA 2,777,363 T→C 21.5% F83F (TTT→TTC)  yfjZ → CP4‑57 prophage; antitoxin of the YpjF‑YfjZ toxin‑antitoxin system
RA 2,782,076 T→C 52.0% V217V (GTA→GTG)  ypjA ← adhesin‑like autotransporter
RA 2,810,756 G→A 100% intergenic (+77/‑14) ygaH → / → mprA putative L‑valine exporter, norvaline resistance protein/transcriptional repressor of microcin B17 synthesis and multidrug efflux
RA 2,810,758 G→A 18.4% intergenic (+79/‑12) ygaH → / → mprA putative L‑valine exporter, norvaline resistance protein/transcriptional repressor of microcin B17 synthesis and multidrug efflux
RA 2,852,356 T→A 100% L74Q (CTG→CAG)  hypD → hydrogenase maturation protein
RA 2,867,164 C→T 20.2% A130T (GCG→ACG)  rpoS ← RNA polymerase, sigma S (sigma 38) factor
RA 2,887,352 T→A 100% intergenic (‑133/+226) ygcB ← / ← cysH Cascade complex anti‑viral R‑loop helicase‑annealase Cas3/phosphoadenosine phosphosulfate reductase; PAPS reductase, thioredoxin dependent
RA 2,892,993 G→A 56.8% E113K (GAA→AAA)  ygcN → putative oxidoreductase
RA 2,964,868 T→C 53.4% K96K (AAA→AAG)  thyA ← thymidylate synthetase
RA 2,971,955 G→A 62.1% R120H (CGC→CAC)  tas → putative NADP(H)‑dependent aldo‑keto reductase
RA 2,987,655 Δ1 bp 54.9% coding (120/633 nt) yqeH → putative LuxR family transcriptional regulator
RA 2,992,747 A→C 46.3% E218D (GAA→GAC)  ygeH → putative transcriptional regulator
RA 2,998,129 C→T 51.2% pseudogene (700/1137 nt) ygeQ ← pseudogene, glycosyl hydrolase family 15, part of T3SS PAI ETT2 remnant
RA 3,017,118 C→A 52.0% R353R (CGC→CGA)  ygfK → putative Fe‑S subunit oxidoreductase subunit
RA 3,041,028 G→A 20.8% R15C (CGT→TGT)  sdhE ← flavinator of succinate dehydrogenase; antitoxin of CptAB toxin‑antitoxin pair
RA 3,057,140 A→G 17.1% intergenic (‑191/+38) ibsC ← / ← serA toxic membrane protein/D‑3‑phosphoglycerate dehydrogenase
RA 3,057,145 G→C 16.5% intergenic (‑196/+33) ibsC ← / ← serA toxic membrane protein/D‑3‑phosphoglycerate dehydrogenase
RA 3,057,150 C→T 16.5% intergenic (‑201/+28) ibsC ← / ← serA toxic membrane protein/D‑3‑phosphoglycerate dehydrogenase
RA 3,066,319 Δ1 bp 19.3% coding (855/897 nt) ygfI ← putative DNA‑binding transcriptional regulator
RA 3,066,326 G→A 17.2% A283V (GCC→GTC)  ygfI ← putative DNA‑binding transcriptional regulator
RA 3,067,320 A→T 15.7% intergenic (‑147/+20) ygfI ← / ← yggE putative DNA‑binding transcriptional regulator/oxidative stress defense protein
RA 3,067,323 A→T 15.2% intergenic (‑150/+17) ygfI ← / ← yggE putative DNA‑binding transcriptional regulator/oxidative stress defense protein
RA 3,070,609 T→C 54.8% K212K (AAA→AAG)  fbaA ← fructose‑bisphosphate aldolase, class II
RA 3,118,566 C→T 55.6% A183T (GCG→ACG)  sslE ← putative secreted and surface‑associated lipoprotein mucinase
RA 3,150,120 T→C 26.0% F153F (TTT→TTC)  yghA → putative oxidoreductase
RA 3,156,590 C→A 16.2% intergenic (+72/‑33) yqhD → / → dkgA aldehyde reductase, NADPH‑dependent/2,5‑diketo‑D‑gluconate reductase A
RA 3,156,591 T→G 15.9% intergenic (+73/‑32) yqhD → / → dkgA aldehyde reductase, NADPH‑dependent/2,5‑diketo‑D‑gluconate reductase A
RA 3,165,015 T→A 26.1% D320V (GAT→GTT)  parC ← DNA topoisomerase IV, subunit A
RA 3,190,398 T→G 51.5% M173R (ATG→AGG)  yqiH → putative periplasmic pilin chaperone
RA 3,244,928 T→C 51.5% intergenic (‑187/‑296) uxaC ← / → exuT uronate isomerase/hexuronate transporter
RA 3,288,032 C→A 15.3% intergenic (+22/‑58) yraH → / → yraI putative fimbrial‑like adhesin protein/putative periplasmic pilin chaperone
RA 3,288,033 T→G 15.6% intergenic (+23/‑57) yraH → / → yraI putative fimbrial‑like adhesin protein/putative periplasmic pilin chaperone
RA 3,379,768:1 +C 100% coding (230/1128 nt) zapE ← divisome ATPase
RA 3,417,572 C→T 15.9% A847V (GCG→GTG)  acrF → multidrug efflux system protein
RA 3,452,057 A→T 100% I77N (ATC→AAC)  rplD ← 50S ribosomal subunit protein L4
RA 3,469,544 G→C 49.9% P104A (CCT→GCT)  chiA ← periplasmic endochitinase
RA 3,477,434 T→C 25.9% intergenic (‑15/‑206) fkpA ← / → slyX FKBP‑type peptidyl‑prolyl cis‑trans isomerase (rotamase)/phi X174 lysis protein
RA 3,524,413 A→G 29.9% I515V (ATT→GTT)  mrcA → penicillin‑binding protein 1a, murein transglycosylase and transpeptidase
RA 3,542,354 Δ1 bp 100% coding (1948/2322 nt) feoB → ferrous iron transporter protein B and GTP‑binding protein; membrane protein
RA 3,560,455:1 +G 100% intergenic (‑2/+1) glpR ← / ← glpR pseudogene, DNA‑binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon/pseudogene, DNA‑binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon
RA 3,577,660 C→T 15.0% intergenic (‑68/+71) gntK ← / ← gntR gluconate kinase 2/d‑gluconate inducible gluconate regulon transcriptional repressor
RA 3,608,471 T→A 53.0% L674Q (CTG→CAG)  zntA → zinc, cobalt and lead efflux system
RA 3,622,796 T→G 100% L1202R (CTG→CGG)  rhsB → Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
RA 3,638,525 A→G 47.2% E295G (GAA→GGA)  pitA → phosphate transporter, low‑affinity; tellurite importer
RA 3,648,042 T→C 100% intergenic (‑254/‑486) dinQ ← / → arsR UV‑inducible membrane toxin, DinQ‑AgrB type I toxin‑antitoxin system/arsenical resistance operon transcriptional repressor; autorepressor
RA 3,669,340 A→G 22.6% intergenic (‑152/‑252) yhjA ← / → treF putative cytochrome C peroxidase/cytoplasmic trehalase
RA 3,669,920 A→G 22.5% E110G (GAA→GGA)  treF → cytoplasmic trehalase
RA 3,686,929 G→T 50.3% Q749K (CAG→AAG)  bcsC ← cellulose synthase subunit
RA 3,705,970 G→A 24.6% intergenic (‑180/+128) dppB ← / ← dppA dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor
RA 3,705,971 C→A 24.5% intergenic (‑181/+127) dppB ← / ← dppA dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor
RA 3,705,984 T→G 30.6% intergenic (‑194/+114) dppB ← / ← dppA dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor
RA 3,705,985 T→C 30.4% intergenic (‑195/+113) dppB ← / ← dppA dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor
RA 3,706,048 G→T 28.2% intergenic (‑258/+50) dppB ← / ← dppA dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor
RA 3,727,880 T→C 54.7% intergenic (‑132/+37) yiaB ← / ← xylB YiaAB family inner membrane protein/xylulokinase
RA 3,770,087 C→A 24.6% pseudogene (55/114 nt) yibU → pseudogene, H repeat‑associated protein
RA 3,783,402 A→G 53.9% V87A (GTC→GCC)  gpsA ← glycerol‑3‑phosphate dehydrogenase (NAD+)
RA 3,798,234 A→T 16.8% intergenic (+27/+5) waaL → / ← waaU O‑antigen ligase/lipopolysaccharide core biosynthesis
RA 3,798,235 A→T 17.4% intergenic (+28/+4) waaL → / ← waaU O‑antigen ligase/lipopolysaccharide core biosynthesis
RA 3,828,936 T→C 48.4% intergenic (‑271/‑9) gltS ← / → xanP glutamate transporter/xanthine permease
RA 3,840,547 T→C 33.5% intergenic (+39/+2) yicS → / ← nepI putative periplasmic protein/putative transporter
RA 3,853,909 A→G 100% intergenic (+267/‑13) tisB → / → emrD toxic membrane persister formation peptide, LexA‑regulated/multidrug efflux system protein
RA 3,859,191 T→C 52.1% D309G (GAT→GGT)  yidK ← putative transporter
RA 3,910,662 A→T 100% D288E (GAT→GAA)  pstS ← phosphate ABC transporter periplasmic binding protein
RA 3,945,528 T→C 48.9% noncoding (1825/2904 nt) rrlC → 23S ribosomal RNA of rrnC operon
RA 3,950,468 G→T 100% intergenic (+48/‑39) ilvL → / → ilvX ilvG operon leader peptide/uncharacterized protein
RA 3,965,820 G→A 56.5% A20A (GCG→GCA)  trxA → thioredoxin 1
RA 3,971,690 A→C 100% Q144P (CAG→CCG)  wecC → UDP‑N‑acetyl‑D‑mannosaminuronic acid dehydrogenase
RA 4,098,512 C→A 26.1% R259R (CGC→CGA)  rhaS → transcriptional activator of rhaBAD and rhaT
RA 4,168,540 T→A 100% intergenic (+93/‑101) gltT → / → rrlB tRNA‑Glu/23S ribosomal RNA of rrnB operon
RA 4,235,689:1 +A 100% intergenic (+282/‑217) pgi → / → yjbE glucosephosphate isomerase/extracellular polysaccharide production threonine‑rich protein
JC 4,242,942 Δ66 bp 100% coding (510‑575/891 nt) malG ← maltose transporter subunit
RA 4,251,287 T→C 46.0% pseudogene (327/1323 nt) yjbI → pseudogene, SopA‑related, pentapeptide repeats‑containing
RA 4,279,370 G→T 24.7% A298S (GCA→TCA)  ghxP → guanine/hypoxanthine permease, high affinity; guanine/hypoxanthine:H+ symporter
RA 4,281,967 T→C 53.7% Q370R (CAG→CGG)  yjcF ← pentapeptide repeats protein
RA 4,289,526 A→G 27.7% K94K (AAA→AAG)  nrfB → nitrite reductase, formate‑dependent, penta‑heme cytochrome c
RA 4,296,060 C→T 28.8% intergenic (+266/+376) gltP → / ← yjcO glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein
RA 4,296,381:1 +GC 100% intergenic (+587/+55) gltP → / ← yjcO glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein
RA 4,340,287 G→A 25.6% L79F (CTT→TTT)  adiA ← arginine decarboxylase
RA 4,352,460 T→G 25.8% intergenic (+103/‑124) yjdJ → / → ghoS GNAT family putative N‑acetyltransferase/antitoxin of GhoTS toxin‑antitoxin pair; endonuclease for ghoT mRNA
RA 4,356,445 A→T 15.1% intergenic (‑34/+25) dtpC ← / ← cadA dipeptide and tripeptide permease/lysine decarboxylase, acid‑inducible
RA 4,356,446 A→T 15.3% intergenic (‑35/+24) dtpC ← / ← cadA dipeptide and tripeptide permease/lysine decarboxylase, acid‑inducible
RA 4,376,471 A→G 19.5% intergenic (+29/‑82) ecnA → / → ecnB entericidin A membrane lipoprotein, antidote entericidin B/entericidin B membrane lipoprotein
RA 4,439,845 T→A 17.6% intergenic (+52/+27) ytfK → / ← ytfL DUF1107 family protein/UPF0053 family inner membrane protein
RA 4,470,952 T→C 15.0% intergenic (‑39/+34) ridA ← / ← pyrI enamine/imine deaminase, reaction intermediate detoxification/aspartate carbamoyltransferase, regulatory subunit
RA 4,470,957 G→A 15.2% intergenic (‑44/+29) ridA ← / ← pyrI enamine/imine deaminase, reaction intermediate detoxification/aspartate carbamoyltransferase, regulatory subunit
RA 4,470,958 G→T 15.4% intergenic (‑45/+28) ridA ← / ← pyrI enamine/imine deaminase, reaction intermediate detoxification/aspartate carbamoyltransferase, regulatory subunit
RA 4,478,879 T→C 28.3% V136A (GTT→GCT)  rraB → protein inhibitor of RNase E
RA 4,479,551 A→G 49.8% intergenic (‑14/‑179) yjgM ← / → yjgN GNAT family putative N‑acetyltransferase/DUF898 family inner membrane protein
RA 4,490,055 T→G 100% E3D (GAA→GAC)  yjgR ← DUF853 family protein with NTPase fold
RA 4,520,500 Δ1 bp 21.5% intergenic (‑176/+171) yjhU ← / ← yjhF putative DNA‑binding transcriptional regulator; KpLE2 phage‑like element/putative transporter
RA 4,520,504:1 +T 22.2% intergenic (‑180/+167) yjhU ← / ← yjhF putative DNA‑binding transcriptional regulator; KpLE2 phage‑like element/putative transporter
RA 4,547,319 C→A 23.3% R742S (CGT→AGT)  fimD → fimbrial usher outer membrane porin protein; FimCD chaperone‑usher
RA 4,551,633 A→G 52.9% intergenic (‑337/‑3) gntP ← / → uxuA fructuronate transporter/mannonate hydrolase
RA 4,615,859 T→G 100% T403P (ACC→CCC)  yjjI ← DUF3029 family protein, putative glycine radical enzyme
RA 4,616,491 T→C 48.1% D192G (GAT→GGT)  yjjI ← DUF3029 family protein, putative glycine radical enzyme
RA 4,631,700 T→C 100% L323P (CTT→CCT)  slt → lytic murein transglycosylase, soluble

Unassigned new junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 15803NA (NA)9 (0.060) 7/170 NT NA noncoding (417/1345 nt) IS186 repeat region
?NC_000913 = 15823 NA (NA)noncoding (437/1345 nt) IS186 repeat region
* ? NC_000913 = 16653NA (NA)24 (0.180) 10/164 NT NA noncoding (1267/1345 nt) IS186 repeat region
?NC_000913 = 16691 NA (NA)noncoding (1305/1345 nt) IS186 repeat region
* ? NC_000913 19879 =NA (NA)11 (0.080) 6/172 NT NA noncoding (685/768 nt) IS1 repeat region
?NC_000913 19905 = NA (NA)noncoding (659/768 nt) IS1 repeat region
* ? NC_000913 = 20044NA (NA)13 (0.090) 9/168 NT NA noncoding (520/768 nt) IS1 repeat region
?NC_000913 = 20084 NA (NA)noncoding (480/768 nt) IS1 repeat region
* ? NC_000913 50327 =NA (NA)7 (0.050) 6/164 NT NA noncoding (1/37 nt) REP5 (repetitive extragenic palindromic) element; contains 1 REP sequences REP5 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 50360 = NA (NA)noncoding (34/37 nt) REP5 (repetitive extragenic palindromic) element; contains 1 REP sequences REP5 (repetitive extragenic palindromic) element; contains 1 REP sequences
* ? NC_000913 173504 =NA (NA)14 (0.100) 9/164 NT NA noncoding (1/85 nt) REP13 (repetitive extragenic palindromic) element; contains 2 REP sequences REP13 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 173536 = NA (NA)noncoding (33/85 nt) REP13 (repetitive extragenic palindromic) element; contains 2 REP sequences REP13 (repetitive extragenic palindromic) element; contains 2 REP sequences
* ? NC_000913 224059 =NA (NA)77 (0.570) 14/164 NT NA noncoding (289/1542 nt) rrsH 16S ribosomal RNA of rrnH operon
?NC_000913 224082 = NA (NA)noncoding (312/1542 nt) rrsH 16S ribosomal RNA of rrnH operon
* ? NC_000913 = 224090NA (NA)15 (0.110) 7/168 NT NA noncoding (320/1542 nt) rrsH 16S ribosomal RNA of rrnH operon
?NC_000913 = 224102 NA (NA)noncoding (332/1542 nt) rrsH 16S ribosomal RNA of rrnH operon
* ? NC_000913 225078 =NA (NA)58 (0.430) 16/164 NT NA noncoding (1308/1542 nt) rrsH 16S ribosomal RNA of rrnH operon
?NC_000913 225100 = NA (NA)noncoding (1330/1542 nt) rrsH 16S ribosomal RNA of rrnH operon
* ? NC_000913 225154 =NA (NA)35 (0.250) 9/168 NT NA noncoding (1384/1542 nt) rrsH 16S ribosomal RNA of rrnH operon
?NC_000913 225176 = NA (NA)noncoding (1406/1542 nt) rrsH 16S ribosomal RNA of rrnH operon
* ? NC_000913 225889 =NA (NA)47 (0.350) 17/164 NT NA noncoding (131/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
?NC_000913 225907 = NA (NA)noncoding (149/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
* ? NC_000913 = 225915NA (NA)14 (0.100) 7/162 NT NA noncoding (157/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
?NC_000913 = 225926 NA (NA)noncoding (168/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
* ? NC_000913 = 225998NA (NA)74 (0.530) 24/170 NT NA noncoding (240/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
?NC_000913 = 226015 NA (NA)noncoding (257/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
* ? NC_000913 226704 =NA (NA)33 (0.230) 10/170 NT NA noncoding (946/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
?NC_000913 226730 = NA (NA)noncoding (972/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
* ? NC_000913 = 2267070 (0.000)53 (0.380) 16/170 NT 100% noncoding (949/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
?NC_000913 = 226725 NA (NA)noncoding (967/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
* ? NC_000913 = 227240NA (NA)15 (0.100) 9/174 NT NA noncoding (1482/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
?NC_000913 = 227264 NA (NA)noncoding (1506/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
* ? NC_000913 = 227444NA (NA)47 (0.340) 13/168 NT NA noncoding (1686/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
?NC_000913 = 227459 NA (NA)noncoding (1701/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
* ? NC_000913 228016 =NA (NA)60 (0.440) 15/164 NT NA noncoding (2258/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
?NC_000913 228041 = NA (NA)noncoding (2283/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
* ? NC_000913 = 228022NA (NA)39 (0.290) 9/164 NT NA noncoding (2264/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
?NC_000913 = 228033 NA (NA)noncoding (2275/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
* ? NC_000913 = 228108NA (NA)57 (0.400) 21/170 NT NA noncoding (2350/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
?NC_000913 = 228124 NA (NA)noncoding (2366/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
* ? NC_000913 = 228224NA (NA)33 (0.240) 12/166 NT NA noncoding (2466/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
?NC_000913 = 228241 NA (NA)noncoding (2483/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
* ? NC_000913 = 2579070 (0.000)162 (1.210) 84/162 NT 100% intergenic (+8/‑769) crl/crl pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers/pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers
?NC_000913 258684 = 0 (0.000)pseudogene (9/331 nt) crl pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers
* ? NC_000913 270846 =NA (NA)18 (0.130) 12/166 NT NA noncoding (306/1221 nt) IS30 repeat region
?NC_000913 270864 = NA (NA)noncoding (324/1221 nt) IS30 repeat region
* ? NC_000913 = 271191NA (NA)9 (0.070) 6/166 NT NA noncoding (651/1221 nt) IS30 repeat region
?NC_000913 = 271214 NA (NA)noncoding (674/1221 nt) IS30 repeat region
* ? NC_000913 271192 =NA (NA)5 (0.040) 5/166 NT 17.1% noncoding (652/1221 nt) IS30 repeat region
?NC_000913 271215 = 26 (0.180)noncoding (675/1221 nt) IS30 repeat region
* ? NC_000913 274347 =NA (NA)37 (0.270) 14/164 NT NA noncoding (803/1195 nt) IS5 repeat region
?NC_000913 274410 = NA (NA)noncoding (740/1195 nt) IS5 repeat region
* ? NC_000913 274384 =NA (NA)29 (0.200) 9/172 NT NA noncoding (766/1195 nt) IS5 repeat region
?NC_000913 274422 = NA (NA)noncoding (728/1195 nt) IS5 repeat region
* ? NC_000913 274525 =NA (NA)26 (0.190) 14/164 NT NA noncoding (625/1195 nt) IS5 repeat region
?NC_000913 274559 = NA (NA)noncoding (591/1195 nt) IS5 repeat region
* ? NC_000913 = 274695NA (NA)22 (0.160) 9/170 NT NA noncoding (455/1195 nt) IS5 repeat region
?NC_000913 = 274727 NA (NA)noncoding (423/1195 nt) IS5 repeat region
* ? NC_000913 274965 =NA (NA)38 (0.270) 12/172 NT NA noncoding (185/1195 nt) IS5 repeat region
?NC_000913 274991 = NA (NA)noncoding (159/1195 nt) IS5 repeat region
* ? NC_000913 = 315520NA (NA)12 (0.090) 9/164 NT NA noncoding (292/1255 nt) IS3 repeat region
?NC_000913 = 315537 NA (NA)noncoding (309/1255 nt) IS3 repeat region
* ? NC_000913 315563 =NA (NA)16 (0.120) 11/158 NT NA noncoding (335/1255 nt) IS3 repeat region
?NC_000913 315599 = NA (NA)noncoding (371/1255 nt) IS3 repeat region
* ? NC_000913 315642 =NA (NA)45 (0.320) 14/168 NT NA noncoding (414/1255 nt) IS3 repeat region
?NC_000913 315671 = NA (NA)noncoding (443/1255 nt) IS3 repeat region
* ? NC_000913 = 315646NA (NA)37 (0.270) 15/168 NT NA noncoding (418/1255 nt) IS3 repeat region
?NC_000913 = 315665 NA (NA)noncoding (437/1255 nt) IS3 repeat region
* ? NC_000913 = 315852NA (NA)33 (0.230) 15/170 NT NA noncoding (624/1255 nt) IS3 repeat region
?NC_000913 = 315875 NA (NA)noncoding (647/1255 nt) IS3 repeat region
* ? NC_000913 = 316201NA (NA)30 (0.230) 6/160 NT NA noncoding (973/1255 nt) IS3 repeat region
?NC_000913 = 316220 NA (NA)noncoding (992/1255 nt) IS3 repeat region
* ? NC_000913 = 346823NA (NA)15 (0.110) 9/168 NT NA intergenic (+64/+34) yahO/prpR periplasmic protein, function unknown, YhcN family/propionate catabolism operon regulatory protein
?NC_000913 = 346853 NA (NA)noncoding (30/30 nt) REP24 (repetitive extragenic palindromic) element; contains 1 REP sequences REP24 (repetitive extragenic palindromic) element; contains 1 REP sequences
* ? NC_000913 = 349938NA (NA)30 (0.220) 7/164 NT NA noncoding (334/365 nt) REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences
?NC_000913 = 349969 NA (NA)noncoding (365/365 nt) REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences
* ? NC_000913 = 354733NA (NA)11 (0.080) 8/164 NT NA noncoding (135/171 nt) REP26 (repetitive extragenic palindromic) element; contains 4 REP sequences REP26 (repetitive extragenic palindromic) element; contains 4 REP sequences
?NC_000913 = 354765 NA (NA)noncoding (167/171 nt) REP26 (repetitive extragenic palindromic) element; contains 4 REP sequences REP26 (repetitive extragenic palindromic) element; contains 4 REP sequences
* ? NC_000913 377335 =NA (NA)22 (0.160) 6/164 NT NA noncoding (1/187 nt) REP32 (repetitive extragenic palindromic) element; contains 4 REP sequences REP32 (repetitive extragenic palindromic) element; contains 4 REP sequences
?NC_000913 377368 = NA (NA)noncoding (34/187 nt) REP32 (repetitive extragenic palindromic) element; contains 4 REP sequences REP32 (repetitive extragenic palindromic) element; contains 4 REP sequences
* ? NC_000913 381663 =NA (NA)43 (0.320) 11/164 NT NA noncoding (404/1331 nt) IS2 repeat region
?NC_000913 381703 = NA (NA)noncoding (444/1331 nt) IS2 repeat region
* ? NC_000913 = 381669NA (NA)41 (0.300) 13/164 NT NA noncoding (410/1331 nt) IS2 repeat region
?NC_000913 = 381695 NA (NA)noncoding (436/1331 nt) IS2 repeat region
* ? NC_000913 = 381837NA (NA)14 (0.100) 5/166 NT NA noncoding (578/1331 nt) IS2 repeat region
?NC_000913 = 381852 NA (NA)noncoding (593/1331 nt) IS2 repeat region
* ? NC_000913 = 381910NA (NA)71 (0.520) 14/166 NT NA noncoding (651/1331 nt) IS2 repeat region
?NC_000913 = 381923 NA (NA)noncoding (664/1331 nt) IS2 repeat region
* ? NC_000913 382110 =NA (NA)25 (0.180) 10/168 NT NA noncoding (851/1331 nt) IS2 repeat region
?NC_000913 382141 = NA (NA)noncoding (882/1331 nt) IS2 repeat region
* ? NC_000913 382237 =NA (NA)11 (0.080) 7/166 NT NA noncoding (978/1331 nt) IS2 repeat region
?NC_000913 382267 = NA (NA)noncoding (1008/1331 nt) IS2 repeat region
* ? NC_000913 382282 =NA (NA)31 (0.230) 13/166 NT NA noncoding (1023/1331 nt) IS2 repeat region
?NC_000913 382313 = NA (NA)noncoding (1054/1331 nt) IS2 repeat region
* ? NC_000913 392927 =95 (0.640)12 (0.090) 7/166 NT 17.2% noncoding (40/1258 nt) IS3 repeat region
?NC_000913 = 566835 27 (0.200)noncoding (59/1258 nt) IS3 repeat region
* ? NC_000913 = 409055NA (NA)16 (0.120) 6/164 NT NA noncoding (4/37 nt) REP34 (repetitive extragenic palindromic) element; contains 1 REP sequences REP34 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 409088 NA (NA)noncoding (37/37 nt) REP34 (repetitive extragenic palindromic) element; contains 1 REP sequences REP34 (repetitive extragenic palindromic) element; contains 1 REP sequences
* ? NC_000913 409056 =NA (NA)19 (0.140) 8/164 NT NA noncoding (5/37 nt) REP34 (repetitive extragenic palindromic) element; contains 1 REP sequences REP34 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 409089 = NA (NA)intergenic (+139/+19) ykiA/rdgC pseudogene/nucleoid‑associated ssDNA and dsDNA binding protein; competitive inhibitor of RecA function
* ? NC_000913 = 422690147 (1.000)25 (0.180) 13/166 NT 15.3% coding (173/1815 nt) malZ maltodextrin glucosidase
?NC_000913 = 422711 139 (1.010)coding (194/1815 nt) malZ maltodextrin glucosidase
* ? NC_000913 501448 =NA (NA)17 (0.130) 7/164 NT NA noncoding (5/84 nt) REP46 (repetitive extragenic palindromic) element; contains 2 REP sequences REP46 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 501478 = NA (NA)noncoding (35/84 nt) REP46 (repetitive extragenic palindromic) element; contains 2 REP sequences REP46 (repetitive extragenic palindromic) element; contains 2 REP sequences
* ? NC_000913 = 57070184 (0.570)16 (0.120) 9/164 NT 17.5% intergenic (+273/‑192) ybcK/ybcL DLP12 prophage; putative recombinase/inactive polymorphonuclear leukocyte migration suppressor; DLP12 prophage; UPF0098 family secreted protein
?NC_000913 = 570711 74 (0.540)intergenic (+283/‑182) ybcK/ybcL DLP12 prophage; putative recombinase/inactive polymorphonuclear leukocyte migration suppressor; DLP12 prophage; UPF0098 family secreted protein
* ? NC_000913 580753 =121 (0.820)19 (0.160) 7/146 NT 17.0% intergenic (‑308/‑81) ylcI/nohD DUF3950 family protein, DLP12 prophage/DLP12 prophage; DNA packaging protein
?NC_000913 580810 = 87 (0.720)intergenic (‑365/‑24) ylcI/nohD DUF3950 family protein, DLP12 prophage/DLP12 prophage; DNA packaging protein
* ? NC_000913 = 601044123 (0.830)23 (0.170) 11/160 NT 17.0% coding (2331/3144 nt) cusA copper/silver efflux system, membrane component
?NC_000913 = 601061 114 (0.860)coding (2348/3144 nt) cusA copper/silver efflux system, membrane component
* ? NC_000913 610152 =NA (NA)3 (0.020)
+AATTTTCGTAG		 3/156 NT NA noncoding (36/98 nt) RIP54 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP54 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 = 3706060 NA (NA)noncoding (98/98 nt) RIP266 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP266 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
* ? NC_000913 = 707978NA (NA)9 (0.080)
+GGATTGTTTGCTGTTTCT		 8/142 NT NA intergenic (+221/‑356) glnS/chiP glutamyl‑tRNA synthetase/chitoporin, uptake of chitosugars
?NC_000913 4137788 = NA (NA)intergenic (‑131/+144) yijF/gldA DUF1287 family protein/glycerol dehydrogenase, NAD+ dependent; 1,2‑propanediol:NAD+ oxidoreductase
* ? NC_000913 729837 =NA (NA)23 (0.160) 10/172 NT NA coding (255/4194 nt) rhsC Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 729868 = NA (NA)coding (286/4194 nt) rhsC Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor
* ? NC_000913 729981 =NA (NA)7 (0.050) 10/168 NT NA coding (399/4194 nt) rhsC Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 730006 = NA (NA)coding (424/4194 nt) rhsC Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor
* ? NC_000913 = 730045NA (NA)25 (0.180) 9/168 NT NA coding (463/4194 nt) rhsC Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 = 730067 NA (NA)coding (485/4194 nt) rhsC Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor
* ? NC_000913 730180 =NA (NA)12 (0.080) 9/172 NT 19.9% coding (598/4194 nt) rhsC Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 730240 = 50 (0.340)coding (658/4194 nt) rhsC Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor
* ? NC_000913 792268 =NA (NA)10 (0.070) 6/164 NT NA noncoding (5/34 nt) REP71 (repetitive extragenic palindromic) element; contains 1 REP sequences REP71 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 792298 = NA (NA)intergenic (‑243/+18) galE/modF UDP‑galactose‑4‑epimerase/molybdate ABC transporter ATPase
* ? NC_000913 805804 =NA (NA)18 (0.130) 9/164 NT NA noncoding (1/178 nt) REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences
?NC_000913 805836 = NA (NA)noncoding (33/178 nt) REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences
* ? NC_000913 = 819757NA (NA)14 (0.100) 8/166 NT NA intergenic (+10/‑127) moaE/ybhL molybdopterin synthase, large subunit/putative acetate transporter; BAX Inhibitor‑1 family inner membrane protein
?NC_000913 = 819784 NA (NA)noncoding (27/27 nt) REP74 (repetitive extragenic palindromic) element; contains 1 REP sequences REP74 (repetitive extragenic palindromic) element; contains 1 REP sequences
* ? NC_000913 = 900799NA (NA)5 (0.040) 5/164 NT NA noncoding (51/87 nt) REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 900831 NA (NA)noncoding (83/87 nt) REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences
* ? NC_000913 = 912309117 (0.790)21 (0.150) 8/164 NT 16.2% coding (1506/1653 nt) hcp hybrid‑cluster [4Fe‑2S‑2O] subunit of anaerobic terminal reductases
?NC_000913 = 912330 110 (0.810)coding (1485/1653 nt) hcp hybrid‑cluster [4Fe‑2S‑2O] subunit of anaerobic terminal reductases
* ? NC_000913 1207790 =65 (0.440)24 (0.200) 20/146 NT 28.5% coding (290/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913 1209619 = 67 (0.550)pseudogene (1/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related
* ? NC_000913 = 120780567 (0.450)25 (0.210) 22/146 NT 29.1% coding (305/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913 = 1209602 67 (0.550)pseudogene (18/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related
* ? NC_000913 = 1269275NA (NA)22 (0.160) 7/162 NT 19.6% coding (1/108 nt) ldrA toxic polypeptide, small
?NC_000913 = 1269313 99 (0.670)intergenic (‑38/+390) ldrA/ldrB toxic polypeptide, small/toxic polypeptide, small
* ? NC_000913 = 12994980 (0.000)120 (0.850) 79/170 NT 100% intergenic (+253/‑1684) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein
?NC_000913 1300698 = 0 (0.000)intergenic (+1453/‑484) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein
* ? NC_000913 1357754 =NA (NA)7 (0.050) 4/160 NT NA intergenic (‑86/+48) ymjA/puuP DUF2543 family protein/putrescine importer
?NC_000913 1357793 = NA (NA)noncoding (24/30 nt) REP111 (repetitive extragenic palindromic) element; contains 1 REP sequences REP111 (repetitive extragenic palindromic) element; contains 1 REP sequences
* ? NC_000913 1396316 =NA (NA)23 (0.170) 12/164 NT 17.0% noncoding (273/1195 nt) IS5 repeat region
?NC_000913 = 1428549 122 (0.830)noncoding (246/1196 nt) IS5 repeat region
* ? NC_000913 1432763 =NA (NA)9 (0.060) 5/168 NT NA coding (353/576 nt) tfaR Rac prophage; putative tail fiber assembly protein
?NC_000913 1432785 = NA (NA)coding (375/576 nt) tfaR Rac prophage; putative tail fiber assembly protein
* ? NC_000913 1465092 =107 (0.720)15 (0.120) 11/156 NT 15.0% intergenic (+31/+73) paaY/ynbG thioesterase required for phenylacetic acid degradation; trimeric; phenylacetate regulatory and detoxification protein; hexapeptide repeat protein/uncharacterized protein
?NC_000913 1465125 = 76 (0.590)intergenic (+64/+40) paaY/ynbG thioesterase required for phenylacetic acid degradation; trimeric; phenylacetate regulatory and detoxification protein; hexapeptide repeat protein/uncharacterized protein
* ? NC_000913 = 1468668NA (NA)11 (0.110)
+26 bp		 7/126 NT NA noncoding (573/1331 nt) IS2 repeat region
?NC_000913 1650843 = NA (NA)noncoding (1/706 nt) IS2 repeat region
* ? NC_000913 = 1468681NA (NA)74 (1.000)
+44 bp		 11/90 NT NA noncoding (560/1331 nt) IS2 repeat region
?NC_000913 1650843 = NA (NA)noncoding (1/706 nt) IS2 repeat region
* ? NC_000913 = 20668320 (0.000)30 (0.230) 7/160 NT 100% noncoding (522/1195 nt) IS5 repeat region
?NC_000913 = 2066857 NA (NA)noncoding (497/1195 nt) IS5 repeat region
* ? NC_000913 = 2219659NA (NA)16 (0.120) 10/162 NT NA intergenic (‑178/+33) osmF/bglX putative ABC transporter periplasmic binding protein/beta‑D‑glucoside glucohydrolase, periplasmic
?NC_000913 = 2219682 NA (NA)intergenic (‑201/+10) osmF/bglX putative ABC transporter periplasmic binding protein/beta‑D‑glucoside glucohydrolase, periplasmic
* ? NC_000913 = 2236687NA (NA)15 (0.170)
+35 bp		 8/108 NT NA intergenic (+187/+56) preA/mglC dihydropyrimidine dehydrogenase, NADH‑dependent, subunit C/methyl‑galactoside transporter subunit
?NC_000913 = 3706060 NA (NA)noncoding (98/98 nt) RIP266 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP266 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
* ? NC_000913 = 2393130NA (NA)10 (0.070) 4/164 NT NA intergenic (‑89/+75) nuoM/nuoL NADH:ubiquinone oxidoreductase, membrane subunit M/NADH:ubiquinone oxidoreductase, membrane subunit L
?NC_000913 = 2393162 NA (NA)noncoding (32/36 nt) REP166 (repetitive extragenic palindromic) element; contains 1 REP sequences REP166 (repetitive extragenic palindromic) element; contains 1 REP sequences
* ? NC_000913 = 2430980NA (NA)8 (0.060) 5/164 NT NA noncoding (52/84 nt) REP169 (repetitive extragenic palindromic) element; contains 2 REP sequences REP169 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 2431012 NA (NA)noncoding (84/84 nt) REP169 (repetitive extragenic palindromic) element; contains 2 REP sequences REP169 (repetitive extragenic palindromic) element; contains 2 REP sequences
* ? NC_000913 = 2443835NA (NA)10 (0.070) 8/164 NT NA noncoding (47/80 nt) REP171 (repetitive extragenic palindromic) element; contains 2 REP sequences REP171 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 2443868 NA (NA)noncoding (80/80 nt) REP171 (repetitive extragenic palindromic) element; contains 2 REP sequences REP171 (repetitive extragenic palindromic) element; contains 2 REP sequences
* ? NC_000913 2538535 =NA (NA)13 (0.100) 8/164 NT NA noncoding (1/98 nt) RIP174 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP174 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 = 3234693 NA (NA)noncoding (56/86 nt) REP233 (repetitive extragenic palindromic) element; contains 2 REP sequences REP233 (repetitive extragenic palindromic) element; contains 2 REP sequences
* ? NC_000913 = 2539674NA (NA)19 (0.140) 11/164 NT NA intergenic (‑91/+43) cysM/cysA cysteine synthase B (O‑acetylserine sulfhydrolase B)/sulfate/thiosulfate transporter subunit
?NC_000913 = 2539688 NA (NA)intergenic (‑105/+29) cysM/cysA cysteine synthase B (O‑acetylserine sulfhydrolase B)/sulfate/thiosulfate transporter subunit
* ? NC_000913 2617939 =NA (NA)13 (0.100) 4/164 NT NA intergenic (+2/+136) yfgD/hda putative oxidoreductase/ATPase regulatory factor involved in DnaA inactivation
?NC_000913 2617967 = NA (NA)intergenic (+30/+108) yfgD/hda putative oxidoreductase/ATPase regulatory factor involved in DnaA inactivation
* ? NC_000913 = 2618037NA (NA)15 (0.110) 8/166 NT NA intergenic (+100/+38) yfgD/hda putative oxidoreductase/ATPase regulatory factor involved in DnaA inactivation
?NC_000913 = 2618053 NA (NA)intergenic (+116/+22) yfgD/hda putative oxidoreductase/ATPase regulatory factor involved in DnaA inactivation
* ? NC_000913 2662311 =NA (NA)14 (0.100) 7/168 NT NA noncoding (3/266 nt) REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences
?NC_000913 2662337 = NA (NA)noncoding (29/266 nt) REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences
* ? NC_000913 2727847 =NA (NA)32 (0.230) 11/170 NT NA noncoding (1338/2904 nt) rrlG 23S ribosomal RNA of rrnG operon
?NC_000913 2727872 = NA (NA)noncoding (1313/2904 nt) rrlG 23S ribosomal RNA of rrnG operon
* ? NC_000913 = 2729452NA (NA)14 (0.110) 8/158 NT NA intergenic (‑8/+164) gltW/rrsG tRNA‑Glu/16S ribosomal RNA of rrnG operon
?NC_000913 = 2729474 NA (NA)intergenic (‑30/+142) gltW/rrsG tRNA‑Glu/16S ribosomal RNA of rrnG operon
* ? NC_000913 2729630 =NA (NA)54 (0.390) 17/168 NT NA noncoding (1528/1542 nt) rrsG 16S ribosomal RNA of rrnG operon
?NC_000913 2729652 = NA (NA)noncoding (1506/1542 nt) rrsG 16S ribosomal RNA of rrnG operon
* ? NC_000913 = 272965123 (0.160)27 (0.190) 10/168 NT 44.0% noncoding (1507/1542 nt) rrsG 16S ribosomal RNA of rrnG operon
?NC_000913 4209675 = 47 (0.340)noncoding (1529/1542 nt) rrsE 16S ribosomal RNA of rrnE operon
* ? NC_000913 2794028 =NA (NA)15 (0.110) 7/166 NT NA noncoding (1/136 nt) REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences
?NC_000913 2794059 = NA (NA)noncoding (32/136 nt) REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences
* ? NC_000913 = 2794135NA (NA)13 (0.090) 10/168 NT NA noncoding (108/136 nt) REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences
?NC_000913 = 2794163 NA (NA)noncoding (136/136 nt) REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences
* ? NC_000913 = 2798052NA (NA)8 (0.060) 4/166 NT NA intergenic (+8/+39) ygaP/stpA DUF2892 family inner membrane rhodanese/DNA binding protein, nucleoid‑associated
?NC_000913 = 2798082 NA (NA)noncoding (30/30 nt) REP192 (repetitive extragenic palindromic) element; contains 1 REP sequences REP192 (repetitive extragenic palindromic) element; contains 1 REP sequences
* ? NC_000913 2835067 =NA (NA)14 (0.100) 6/164 NT NA noncoding (1/82 nt) REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 2835099 = NA (NA)noncoding (33/82 nt) REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences
* ? NC_000913 2837465 =NA (NA)23 (0.170) 7/162 NT NA noncoding (1/27 nt) REP196 (repetitive extragenic palindromic) element; contains 1 REP sequences REP196 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 2837492 = NA (NA)intergenic (‑67/+86) hypF/hydN carbamoyl phosphate phosphatase and [NiFe] hydrogenase maturation protein/formate dehydrogenase‑H, [4Fe‑4S] ferredoxin subunit
* ? NC_000913 2842423 =NA (NA)15 (0.110) 8/164 NT NA noncoding (1/79 nt) REP197 (repetitive extragenic palindromic) element; contains 2 REP sequences REP197 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 2842453 = NA (NA)noncoding (31/79 nt) REP197 (repetitive extragenic palindromic) element; contains 2 REP sequences REP197 (repetitive extragenic palindromic) element; contains 2 REP sequences
* ? NC_000913 3012400 =NA (NA)19 (0.140) 8/166 NT NA intergenic (+7/+214) yqeA/yqeB putative amino acid kinase/XdhC‑CoxI family protein with NAD(P)‑binding Rossman fold
?NC_000913 3012426 = NA (NA)noncoding (26/204 nt) RIP209 (repetitive extragenic palindromic) element; contains 4 REP sequences and 1 IHF site RIP209 (repetitive extragenic palindromic) element; contains 4 REP sequences and 1 IHF site
* ? NC_000913 3203112 =NA (NA)8 (0.060) 3/164 NT NA coding (1222/1239 nt) cca fused tRNA nucleotidyl transferase/2'3'‑cyclic phosphodiesterase/2'nucleotidase and phosphatase
?NC_000913 3203140 = NA (NA)intergenic (+11/+170) cca/bacA fused tRNA nucleotidyl transferase/2'3'‑cyclic phosphodiesterase/2'nucleotidase and phosphatase/undecaprenyl pyrophosphate phosphatase
* ? NC_000913 = 3216644NA (NA)9 (0.070) 6/164 NT NA noncoding (44/78 nt) REP228 (repetitive extragenic palindromic) element; contains 2 REP sequences REP228 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 3216674 NA (NA)noncoding (74/78 nt) REP228 (repetitive extragenic palindromic) element; contains 2 REP sequences REP228 (repetitive extragenic palindromic) element; contains 2 REP sequences
* ? NC_000913 3277819 =NA (NA)13 (0.100) 8/162 NT NA noncoding (1/29 nt) REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 3277844 = NA (NA)noncoding (26/29 nt) REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences
* ? NC_000913 3296997 =NA (NA)16 (0.110) 11/168 NT NA intergenic (+13/+101) yraP/yraQ outer membrane lipoprotein/putative inner membrane permease
?NC_000913 3297033 = NA (NA)noncoding (35/84 nt) REP240 (repetitive extragenic palindromic) element; contains 2 REP sequences REP240 (repetitive extragenic palindromic) element; contains 2 REP sequences
* ? NC_000913 3313257 =NA (NA)8 (0.060) 6/166 NT NA noncoding (6/77 nt) REP242 (repetitive extragenic palindromic) element; contains 2 REP sequences REP242 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 3313287 = NA (NA)noncoding (36/77 nt) REP242 (repetitive extragenic palindromic) element; contains 2 REP sequences REP242 (repetitive extragenic palindromic) element; contains 2 REP sequences
* ? NC_000913 = 3426965NA (NA)11 (0.080) 8/170 NT NA noncoding (69/76 nt) alaU tRNA‑Ala
?NC_000913 = 3426988 NA (NA)noncoding (46/76 nt) alaU tRNA‑Ala
* ? NC_000913 3428910 =20 (0.140)13 (0.090) 10/168 NT 40.8% intergenic (‑148/‑326) rrsD/yrdA 16S ribosomal RNA of rrnD operon/bacterial transferase hexapeptide domain protein
?NC_000913 = 4207974 NA (NA)intergenic (‑442/‑173) purH/rrsE IMP cyclohydrolase and phosphoribosylaminoimidazolecarboxamide formyltransferase/16S ribosomal RNA of rrnE operon
* ? NC_000913 3470738 =NA (NA)21 (0.150) 9/168 NT NA coding (592/1185 nt) tufA translation elongation factor EF‑Tu 1
?NC_000913 3470767 = NA (NA)coding (563/1185 nt) tufA translation elongation factor EF‑Tu 1
* ? NC_000913 = 3546221NA (NA)12 (0.090) 8/166 NT NA intergenic (+22/‑338) nfuA/gntT Fe/S biogenesis protein, putative scaffold/chaperone protein/gluconate transporter, high‑affinity GNT I system
?NC_000913 = 3546253 NA (NA)noncoding (32/36 nt) REP253 (repetitive extragenic palindromic) element; contains 1 REP sequences REP253 (repetitive extragenic palindromic) element; contains 1 REP sequences
* ? NC_000913 3546222 =NA (NA)21 (0.150) 8/166 NT NA noncoding (1/36 nt) REP253 (repetitive extragenic palindromic) element; contains 1 REP sequences REP253 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 3546254 = NA (NA)noncoding (33/36 nt) REP253 (repetitive extragenic palindromic) element; contains 1 REP sequences REP253 (repetitive extragenic palindromic) element; contains 1 REP sequences
* ? NC_000913 = 3620116NA (NA)18 (0.130) 5/166 NT 100% coding (925/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 = 3620152 0 (0.000)coding (961/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
* ? NC_000913 = 3620220NA (NA)19 (0.140) 10/166 NT 100% coding (1029/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 = 3620255 0 (0.000)coding (1064/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
* ? NC_000913 3620227 =NA (NA)8 (0.060) 7/166 NT 100% coding (1036/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 3620250 = 0 (0.000)coding (1059/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
* ? NC_000913 3620569 =NA (NA)39 (0.280) 10/166 NT 100% coding (1378/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 3620582 = 0 (0.000)coding (1391/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
* ? NC_000913 = 3620614NA (NA)23 (0.170) 9/166 NT 100% coding (1423/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 = 3620635 0 (0.000)coding (1444/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
* ? NC_000913 = 3621232NA (NA)26 (0.190) 8/168 NT 100% coding (2041/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 = 3621274 0 (0.000)coding (2083/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
* ? NC_000913 = 3621314NA (NA)7 (0.050) 7/168 NT 100% coding (2123/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 = 3621344 0 (0.000)coding (2153/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
* ? NC_000913 = 3621939NA (NA)10 (0.070) 6/170 NT 100% coding (2748/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 = 3621967 0 (0.000)coding (2776/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
* ? NC_000913 = 3622151NA (NA)6 (0.040) 3/168 NT 100% coding (2960/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 = 3622177 0 (0.000)coding (2986/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
* ? NC_000913 3622466 =NA (NA)34 (0.240) 8/170 NT 51.2% coding (3275/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 3622497 = 34 (0.230)coding (3306/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
* ? NC_000913 3632752 =103 (0.700)18 (0.140) 7/154 NT 15.5% intergenic (‑162/+100) yhiJ/yhiL DUF4049 family protein/pseudogene, DUF4049 family protein
?NC_000913 3632789 = 108 (0.850)intergenic (‑199/+63) yhiJ/yhiL DUF4049 family protein/pseudogene, DUF4049 family protein
* ? NC_000913 = 3650792NA (NA)20 (0.150) 11/166 NT NA noncoding (81/100 nt) RIP262 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP262 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 = 3650805 NA (NA)noncoding (94/100 nt) RIP262 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP262 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
* ? NC_000913 3765531 =NA (NA)26 (0.190) 11/168 NT 100% coding (3349/4134 nt) rhsA Rhs protein with putative toxin 55 domain; putative polysaccharide synthesis/export protein; putative neighboring cell growth inhibitor
?NC_000913 3765547 = 0 (0.000)coding (3365/4134 nt) rhsA Rhs protein with putative toxin 55 domain; putative polysaccharide synthesis/export protein; putative neighboring cell growth inhibitor
* ? NC_000913 3898629 =NA (NA)15 (0.110) 9/162 NT NA intergenic (+20/+42) cbrC/yieK UPF0167 family protein/putative 6‑phosphogluconolactonase
?NC_000913 3898659 = NA (NA)intergenic (+50/+12) cbrC/yieK UPF0167 family protein/putative 6‑phosphogluconolactonase
* ? NC_000913 3910443 =NA (NA)7 (0.050) 6/168 NT NA noncoding (1/35 nt) REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 3910474 = NA (NA)noncoding (32/35 nt) REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences
* ? NC_000913 3943544 =NA (NA)24 (0.170) 10/174 NT NA intergenic (+34/‑160) gltU/rrlC tRNA‑Glu/23S ribosomal RNA of rrnC operon
?NC_000913 4037399 = NA (NA)intergenic (+64/‑120) alaT/rrlA tRNA‑Ala/23S ribosomal RNA of rrnA operon
* ? NC_000913 = 3943666NA (NA)30 (0.210) 10/170 NT NA intergenic (+156/‑38) gltU/rrlC tRNA‑Glu/23S ribosomal RNA of rrnC operon
?NC_000913 = 3943696 NA (NA)intergenic (+186/‑8) gltU/rrlC tRNA‑Glu/23S ribosomal RNA of rrnC operon
* ? NC_000913 = 3946822NA (NA)53 (0.370) 8/174 NT 24.1% intergenic (+3/‑50) rrfC/aspT 5S ribosomal RNA of rrnC operon/tRNA‑Asp
?NC_000913 = 4040683 171 (1.160)intergenic (+47/+223) rrfA/mobB 5S ribosomal RNA of rrnA operon/molybdopterin‑guanine dinucleotide biosynthesis protein B
* ? NC_000913 3962704 =NA (NA)12 (0.090) 8/166 NT NA noncoding (5/36 nt) REP286 (repetitive extragenic palindromic) element; contains 1 REP sequences REP286 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 3962736 = NA (NA)intergenic (+38/+9) rep/gpp DNA helicase and single‑stranded DNA‑dependent ATPase/guanosine pentaphosphatase/exopolyphosphatase
* ? NC_000913 = 4008400NA (NA)19 (0.140) 10/164 NT NA noncoding (4/34 nt) REP289 (repetitive extragenic palindromic) element; contains 1 REP sequences REP289 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 4008430 NA (NA)noncoding (34/34 nt) REP289 (repetitive extragenic palindromic) element; contains 1 REP sequences REP289 (repetitive extragenic palindromic) element; contains 1 REP sequences
* ? NC_000913 4008401 =NA (NA)12 (0.090) 8/164 NT NA noncoding (5/34 nt) REP289 (repetitive extragenic palindromic) element; contains 1 REP sequences REP289 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 4008431 = NA (NA)intergenic (+54/+8) rhtC/rhtB threonine efflux pump/homoserine, homoserine lactone and S‑methyl‑methionine efflux pump
* ? NC_000913 4040482 =NA (NA)78 (0.570) 13/166 NT NA intergenic (+59/‑35) rrlA/rrfA 23S ribosomal RNA of rrnA operon/5S ribosomal RNA of rrnA operon
?NC_000913 4040506 = NA (NA)intergenic (+83/‑11) rrlA/rrfA 23S ribosomal RNA of rrnA operon/5S ribosomal RNA of rrnA operon
* ? NC_000913 = 4063563NA (NA)16 (0.120) 7/164 NT NA noncoding (45/75 nt) REP296 (repetitive extragenic palindromic) element; contains 2 REP sequences REP296 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 4063593 NA (NA)noncoding (75/75 nt) REP296 (repetitive extragenic palindromic) element; contains 2 REP sequences REP296 (repetitive extragenic palindromic) element; contains 2 REP sequences
* ? NC_000913 = 4148478NA (NA)19 (0.140) 9/164 NT NA noncoding (49/82 nt) REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 4148511 NA (NA)noncoding (82/82 nt) REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences
* ? NC_000913 4166489 =NA (NA)13 (0.090) 7/178 NT NA intergenic (+204/‑170) murI/rrsB glutamate racemase/16S ribosomal RNA of rrnB operon
?NC_000913 4208001 = NA (NA)intergenic (‑469/‑146) purH/rrsE IMP cyclohydrolase and phosphoribosylaminoimidazolecarboxamide formyltransferase/16S ribosomal RNA of rrnE operon
* ? NC_000913 = 417160747 (0.320)92 (0.670) 17/166 NT 67.7% intergenic (+63/‑30) rrlB/rrfB 23S ribosomal RNA of rrnB operon/5S ribosomal RNA of rrnB operon
?NC_000913 = 4213022 NA (NA)intergenic (+76/‑18) rrlE/rrfE 23S ribosomal RNA of rrnE operon/5S ribosomal RNA of rrnE operon
* ? NC_000913 4235376 =NA (NA)7 (0.050) 5/156 NT NA coding (1619/1650 nt) pgi glucosephosphate isomerase
?NC_000913 4235411 = NA (NA)intergenic (+4/‑495) pgi/yjbE glucosephosphate isomerase/extracellular polysaccharide production threonine‑rich protein
* ? NC_000913 4266888 =NA (NA)15 (0.110) 9/164 NT NA noncoding (1/97 nt) RIP318 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP318 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 4266918 = NA (NA)noncoding (31/97 nt) RIP318 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP318 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
* ? NC_000913 = 4285342NA (NA)16 (0.120) 11/164 NT NA noncoding (41/77 nt) REP320 (repetitive extragenic palindromic) element; contains 2 REP sequences REP320 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 4285374 NA (NA)noncoding (73/77 nt) REP320 (repetitive extragenic palindromic) element; contains 2 REP sequences REP320 (repetitive extragenic palindromic) element; contains 2 REP sequences
* ? NC_000913 4317917 =NA (NA)12 (0.090) 5/164 NT NA noncoding (1/83 nt) REP323 (repetitive extragenic palindromic) element; contains 2 REP sequences REP323 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 4317949 = NA (NA)noncoding (33/83 nt) REP323 (repetitive extragenic palindromic) element; contains 2 REP sequences REP323 (repetitive extragenic palindromic) element; contains 2 REP sequences
* ? NC_000913 4325806 =NA (NA)40 (0.290) 8/164 NT NA noncoding (5/583 nt) REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences
?NC_000913 4325838 = NA (NA)noncoding (37/583 nt) REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences
* ? NC_000913 4344813 =NA (NA)16 (0.120) 8/160 NT NA intergenic (+23/+116) melB/yjdF melibiose:sodium symporter/DUF2238 family inner membrane protein
?NC_000913 4344842 = NA (NA)noncoding (28/95 nt) RIP327 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP327 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
* ? NC_000913 = 4415961NA (NA)20 (0.150) 11/166 NT NA noncoding (4/34 nt) REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 4415991 NA (NA)noncoding (34/34 nt) REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences
* ? NC_000913 4415962 =NA (NA)15 (0.110) 8/166 NT NA noncoding (5/34 nt) REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 4415992 = NA (NA)intergenic (+92/+25) aidB/yjfN DNA alkylation damage repair protein; flavin‑containing DNA binding protein, weak isovaleryl CoA dehydrogenase/DUF1471 family periplasmic protein
* ? NC_000913 = 4554508NA (NA)11 (0.080) 9/164 NT NA noncoding (4/34 nt) REP346 (repetitive extragenic palindromic) element; contains 1 REP sequences REP346 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 4554538 NA (NA)noncoding (34/34 nt) REP346 (repetitive extragenic palindromic) element; contains 1 REP sequences REP346 (repetitive extragenic palindromic) element; contains 1 REP sequences
* ? NC_000913 4554509 =NA (NA)8 (0.060) 7/164 NT NA noncoding (5/34 nt) REP346 (repetitive extragenic palindromic) element; contains 1 REP sequences REP346 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 4554539 = NA (NA)intergenic (+178/‑37) uxuB/uxuR D‑mannonate oxidoreductase, NAD‑dependent/fructuronate‑inducible hexuronate regulon transcriptional repressor; autorepressor