mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.29.0 revision 8f9c342918e4
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 1126 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4636368 | 140 (0.950) | 5 (0.040) | 4/166 | NT | 3.5% | coding (362/690 nt) | creB | response regulator in two‑component regulatory system with CreC |
| ? | NC_000913 | = 4636382 | 148 (1.080) | coding (376/690 nt) | creB | response regulator in two‑component regulatory system with CreC | |||||
| * | ? | NC_000913 | = 4632232 | 157 (1.060) | 9 (0.060) | 6/170 | NT | 5.6% | coding (1500/1938 nt) | slt | lytic murein transglycosylase, soluble |
| ? | NC_000913 | = 4632249 | 156 (1.110) | coding (1517/1938 nt) | slt | lytic murein transglycosylase, soluble | |||||
| * | ? | NC_000913 | 4631582 = | 196 (1.330) | 8 (0.060) | 4/168 | NT | 4.3% | coding (850/1938 nt) | slt | lytic murein transglycosylase, soluble |
| ? | NC_000913 | 4631612 = | 167 (1.200) | coding (880/1938 nt) | slt | lytic murein transglycosylase, soluble | |||||
| * | ? | NC_000913 | = 4629407 | 173 (1.170) | 5 (0.040) | 4/164 | NT | 2.9% | coding (1116/1668 nt) | ettA | energy‑dependent translational throttle A |
| ? | NC_000913 | = 4629423 | 177 (1.300) | coding (1100/1668 nt) | ettA | energy‑dependent translational throttle A | |||||
| * | ? | NC_000913 | = 4627204 | 160 (1.080) | 7 (0.050) | 6/162 | NT | 4.4% | coding (1293/1383 nt) | radA | DNA repair protein |
| ? | NC_000913 | = 4627223 | 156 (1.160) | coding (1312/1383 nt) | radA | DNA repair protein | |||||
| * | ? | NC_000913 | 4618029 = | 170 (1.150) | 10 (0.070) | 8/166 | NT | 6.1% | coding (707/780 nt) | deoC | 2‑deoxyribose‑5‑phosphate aldolase, NAD(P)‑linked |
| ? | NC_000913 | 4618065 = | 150 (1.090) | coding (743/780 nt) | deoC | 2‑deoxyribose‑5‑phosphate aldolase, NAD(P)‑linked | |||||
| * | ? | NC_000913 | = 4615442 | 149 (1.010) | 10 (0.080) | 7/158 | NT | 6.7% | coding (102/864 nt) | yjjW | putative pyruvate formate lyase activating enzyme |
| ? | NC_000913 | = 4615456 | 146 (1.120) | coding (88/864 nt) | yjjW | putative pyruvate formate lyase activating enzyme | |||||
| * | ? | NC_000913 | = 4613554 | 171 (1.160) | 7 (0.050) | 5/170 | NT | 3.9% | coding (74/780 nt) | yjjV | putative DNase |
| ? | NC_000913 | = 4613578 | 184 (1.310) | coding (98/780 nt) | yjjV | putative DNase | |||||
| * | ? | NC_000913 | = 4611021 | 143 (0.970) | 11 (0.080) | 8/162 | NT | 7.6% | intergenic (+18/‑375) | prfC/osmY | peptide chain release factor RF‑3/salt‑inducible putative ABC transporter periplasmic binding protein |
| ? | NC_000913 | = 4611031 | 137 (1.020) | intergenic (+28/‑365) | prfC/osmY | peptide chain release factor RF‑3/salt‑inducible putative ABC transporter periplasmic binding protein | |||||
| * | ? | NC_000913 | = 4609437 | 164 (1.110) | 7 (0.050) | 5/170 | NT | 4.0% | coding (24/1590 nt) | prfC | peptide chain release factor RF‑3 |
| ? | NC_000913 | = 4609459 | 177 (1.260) | coding (46/1590 nt) | prfC | peptide chain release factor RF‑3 | |||||